diff --git a/README.md b/README.md index 547275d..a8f0310 100644 --- a/README.md +++ b/README.md @@ -21,7 +21,7 @@ Need different datasets? An empty instance to populate with your own data? Copy the `docker-compose.yml` and `ambit-config.env` files to a new directory and edit them to suit your needs. ## Examples -Check the [examples](examples/) for some ready-made solutions or see below for more technical information. +Check the [examples](examples) for some ready-made solutions or see below for more technical information. ## Importing custom datasets Some publicly available datasets are automatically downloaded, when their names are recognized in the configuration. Currently, these include `nanoreg1` and `nanoreg2`. diff --git a/examples/README.md b/examples/README.md index 2b3f1c7..91d9a46 100644 --- a/examples/README.md +++ b/examples/README.md @@ -1,10 +1,10 @@ # AMBIT with Docker examples -## [echa-reach](echa-reach/) +## [echa-reach](echa-reach) The [Cefic-LRI cheminformatics data management tool](http://cefic-lri.org/toolbox/ambit/). Note that **no data is included** and must be provided separately. If you are a Cefic member, you can download the data from the Cefic members extranet. -## [empty-db](empty-db/) +## [empty-db](empty-db) Shows how to start AMBIT with an empty database. Mainly intended for populating AMBIT with your own data. -## [empty-db-solr](empty-db-solr/) +## [empty-db-solr](empty-db-solr) Builds upon the empty database example by adding a small Apache Solr cluster for easy experimenting. \ No newline at end of file diff --git a/examples/empty-db-solr/README.md b/examples/empty-db-solr/README.md index 6ca4878..2411f6e 100644 --- a/examples/empty-db-solr/README.md +++ b/examples/empty-db-solr/README.md @@ -1,5 +1,5 @@ # Empty database plus Solr -This builds upon the [empty database example](../empty-db/README.md) by adding a small [Apache Solr](https://solr.apache.org/) cluster for testing. +This builds upon the [empty database example](../empty-db) by adding a small [Apache Solr](https://solr.apache.org/) cluster for testing. Add data in AMBIT at http://127.0.0.1:8080/ambit or directly import to the RDBMS, which is exposed on `127.0.0.1:3306`. Solr is accessible behind a [HAProxy](http://www.haproxy.org/) load balancer on http://127.0.0.1:8983/.