CITATION.cff

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cff-version: 1.2.0
title: 'clumpedr: clumped isotope data analysis in R'
message: >-
  If you use this software, please cite it using the
  metadata from this file.
type: software
authors:
  - given-names: Ilja Japhir
    family-names: Kocken
    email: i.j.kocken@uu.nl
    affiliation: Utrecht University
    orcid: 'https://orcid.org/0000-0003-2196-8718'
  - given-names: Sebastian
    family-names: Kopf
    affiliation: CU Boulder
    orcid: 'https://orcid.org/0000-0002-2044-0201'
identifiers:
  - type: doi
    value: 10.5281/zenodo.10638816
    description: Zenodo
repository-code: 'https://github.com/isoverse/clumpedr/'
url: 'https://clumpedr.isoverse.org/'
repository-artifact: 'https://zenodo.org/records/11111304'
abstract: >
  Clumpedr aims to facilitate analysis of clumped isotope
  data. It builds on isoreader which is used to import raw
  data files from the mass spectrometer, and most of the
  important data processing parts are based on Huntington et
  al. 2009 and Daëron et al. 2016.


  Clumpedr includes dataprocessing steps such as:

  - exclusion of failed cycles, based on a sudden drop of
  pressure

  - simple background corrections using the mass 47.5 cup

  - linear intensity matching of reference gas mass 44 to
  the sample gas, and application of this shift to all other
  masses

  - calculation of delta values

  - default calculations use the Brand et al., 2010
  pararameters.

  - calculation of big delta values, Δ₄₇

  - summarize per sample

  - per-run correction and calculation of the empirical
  reference frame
keywords:
  - isotope
  - stable isotope
  - clumped isotope
  - data
  - processing
  - R
  - tidyverse
license: AGPL-3.0-or-later
commit: 0c673f45d6d8aa69a40f22313780afc75faeb2a1
version: v0.3.0
date-released: '2024-05-03'