covariate_adjustment.bib

%%% OUR REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{VanLancker2022,
  doi = {10.48550/ARXIV.2201.12921},
  url = {https://arxiv.org/abs/2201.12921},
  author = {Van Lancker,  Kelly and Betz,  Joshua and Rosenblum,  Michael},
  keywords = {Methodology (stat.ME),  FOS: Computer and information sciences,  FOS: Computer and information sciences},
  title = {Combining Covariate Adjustment with Group Sequential,  Information Adaptive Designs to Improve Randomized Trial Efficiency},
  journal={arXiv preprint arXiv:1409.0473},
  publisher = {arXiv},
  year = {2022},
  copyright = {Creative Commons Attribution 4.0 International}
}




%%% R PACKAGE REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@Manual{boot_package,
    title = {boot: Bootstrap R (S-Plus) Functions},
    author = {Angelo Canty and B. D. Ripley},
    year = {2022},
    note = {R package version 1.3-28.1},
    url = {https://cran.r-project.org/web/packages/boot/}
  }

@Manual{margins_package,
    title = {margins: Marginal Effects for Model Objects},
    author = {Thomas J. Leeper},
    year = {2021},
    note = {R package version 0.3.26},
    url = {https://cran.r-project.org/web/packages/margins}
  }

@Manual{rpact_package,
    title = {rpact: Confirmatory Adaptive Clinical Trial Design and Analysis},
    author = {Gernot Wassmer and Friedrich Pahlke},
    year = {2023},
    note = {R package version 3.4.0},
    url = {https://CRAN.R-project.org/web/packages/rpact},
  }

@article{Zeileis2006,
  doi = {10.18637/jss.v016.i09},
  url = {https://doi.org/10.18637/jss.v016.i09},
  year = {2006},
  publisher = {Foundation for Open Access Statistic},
  volume = {16},
  number = {9},
  author = {Achim Zeileis},
  title = {Object-Oriented Computation of Sandwich Estimators},
  journal = {Journal of Statistical Software}
}




%%% CLINICAL TRIALS REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Assmann2000,
  doi = {10.1016/s0140-6736(00)02039-0},
  url = {https://doi.org/10.1016/s0140-6736(00)02039-0},
  year = {2000},
  month = mar,
  publisher = {Elsevier {BV}},
  volume = {355},
  number = {9209},
  pages = {1064--1069},
  author = {Susan F Assmann and Stuart J Pocock and Laura E Enos and Linda E Kasten},
  title = {Subgroup analysis and other (mis)uses of baseline data in clinical trials},
  journal = {The Lancet}
}

@article{Schulz2010,
  doi = {10.1136/bmj.c332},
  url = {https://doi.org/10.1136/bmj.c332},
  year = {2010},
  month = mar,
  publisher = {{BMJ}},
  volume = {340},
  number = {mar23 1},
  pages = {c332--c332},
  author = {K. F Schulz and D. G Altman and D. Moher and},
  title = {{CONSORT} 2010 Statement: updated guidelines for reporting parallel group randomised trials},
  journal = {{BMJ}}
}

@article{Gamble2017,
  doi = {10.1001/jama.2017.18556},
  url = {https://doi.org/10.1001/jama.2017.18556},
  year = {2017},
  month = dec,
  publisher = {American Medical Association ({AMA})},
  volume = {318},
  number = {23},
  pages = {2337},
  author = {Carrol Gamble and Ashma Krishan and Deborah Stocken and Steff Lewis and Edmund Juszczak and Caroline Dor{\'{e}} and Paula R. Williamson and Douglas G. Altman and Alan Montgomery and Pilar Lim and Jesse Berlin and Stephen Senn and Simon Day and Yolanda Barbachano and Elizabeth Loder},
  title = {Guidelines for the Content of Statistical Analysis Plans in Clinical Trials},
  journal = {{JAMA}}
}




%%% INFORMATION MONITORING REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
@article{Mehta2001,
  title = {Flexible Sample Size Considerations Using Information-Based Interim Monitoring},
  volume = {35},
  ISSN = {2164-9200},
  url = {http://dx.doi.org/10.1177/009286150103500407},
  DOI = {10.1177/009286150103500407},
  number = {4},
  journal = {Drug Information Journal},
  publisher = {Springer Science and Business Media LLC},
  author = {Mehta,  Cyrus R. and Tsiatis,  Anastasios A.},
  year = {2001},
  month = oct,
  pages = {1095–1112}
}




%%% GROUP SEQUENTIAL DESIGNS REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@book{Jennison1999,
  doi = {10.1201/9780367805326},
  url = {https://doi.org/10.1201/9780367805326},
  year = {1999},
  month = sep,
  publisher = {Chapman and Hall/{CRC}},
  author = {Christopher Jennison and Bruce W. Turnbull},
  title = {Group Sequential Methods with Applications to Clinical Trials}
}

@article{Lakens2021,
  title = {Group Sequential Designs: A Tutorial},
  url = {http://dx.doi.org/10.31234/osf.io/x4azm},
  DOI = {10.31234/osf.io/x4azm},
  publisher = {Center for Open Science},
  author = {Lakens,  Daniel and Pahlke,  Friedrich and Wassmer,  Gernot},
  year = {2021},
  month = jan
}

@article{scharfstein1997semiparametric,
  title={Semiparametric efficiency and its implication on the design and analysis of group-sequential studies},
  author={Scharfstein, Daniel O and Tsiatis, Anastasios A and Robins, James M},
  journal={Journal of the American Statistical Association},
  volume={92},
  number={440},
  pages={1342--1350},
  year={1997},
  publisher={Taylor \& Francis Group}
}

@article{jennison1997group,
  title={Group-sequential analysis incorporating covariate information},
  author={Jennison, Christopher and Turnbull, Bruce W},
  journal={Journal of the American Statistical Association},
  volume={92},
  number={440},
  pages={1330--1341},
  year={1997},
  publisher={Taylor \& Francis}
}


%%% STRATIFIED RANDOMIZATION REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Kahan2011,
  doi = {10.1002/sim.4431},
  url = {https://doi.org/10.1002/sim.4431},
  year = {2011},
  month = dec,
  publisher = {Wiley},
  volume = {31},
  number = {4},
  pages = {328--340},
  author = {Brennan C. Kahan and Tim P. Morris},
  title = {Improper analysis of trials randomised using stratified blocks or minimisation},
  journal = {Statistics in Medicine}
}

@article{Kernan1999,
  doi = {10.1016/s0895-4356(98)00138-3},
  url = {https://doi.org/10.1016/s0895-4356(98)00138-3},
  year = {1999},
  month = jan,
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  volume = {52},
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  author = {W Kernan},
  title = {Stratified Randomization for Clinical Trials},
  journal = {Journal of Clinical Epidemiology}
}

@article{Lin2015,
  doi = {10.1016/j.cct.2015.07.011},
  url = {https://doi.org/10.1016/j.cct.2015.07.011},
  year = {2015},
  month = nov,
  publisher = {Elsevier {BV}},
  volume = {45},
  pages = {21--25},
  author = {Yunzhi Lin and Ming Zhu and Zheng Su},
  title = {The pursuit of balance: An overview of covariate-adaptive randomization techniques in clinical trials},
  journal = {Contemporary Clinical Trials}
}

@article{Wang2021,
  doi = {10.1080/01621459.2021.1981338},
  url = {https://doi.org/10.1080/01621459.2021.1981338},
  year = {2021},
  month = nov,
  publisher = {Informa {UK} Limited},
  volume = {118},
  number = {542},
  pages = {1152--1163},
  author = {Bingkai Wang and Ryoko Susukida and Ramin Mojtabai and Masoumeh Amin-Esmaeili and Michael Rosenblum},
  title = {Model-Robust Inference for Clinical Trials that Improve Precision by Stratified Randomization and Covariate Adjustment},
  journal = {Journal of the American Statistical Association}
}




%%% SURVEYS OF COVARIATE ADJUSTMENT IN PRACTICE %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Austin2010,
  doi = {10.1016/j.jclinepi.2009.06.002},
  url = {https://doi.org/10.1016/j.jclinepi.2009.06.002},
  year = {2010},
  month = feb,
  publisher = {Elsevier {BV}},
  volume = {63},
  number = {2},
  pages = {142--153},
  author = {Peter C. Austin and Andrea Manca and Merrick Zwarenstein and David N. Juurlink and Matthew B. Stanbrook},
  title = {A substantial and confusing variation exists in handling of baseline covariates in randomized controlled trials: a review of trials published in leading medical journals},
  journal = {Journal of Clinical Epidemiology}
}

@article{Pocock2002,
  doi = {10.1002/sim.1296},
  url = {https://doi.org/10.1002/sim.1296},
  year = {2002},
  publisher = {Wiley},
  volume = {21},
  number = {19},
  pages = {2917--2930},
  author = {Stuart J. Pocock and Susan E. Assmann and Laura E. Enos and Linda E. Kasten},
  title = {Subgroup analysis,  covariate adjustment and baseline comparisons in clinical trial reporting: current practice and problems},
  journal = {Statistics in Medicine}
}




%%% REVIEW ARTICLES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Benkeser2020,
  doi = {10.1111/biom.13377},
  url = {https://doi.org/10.1111/biom.13377},
  year = {2020},
  month = oct,
  publisher = {Wiley},
  volume = {77},
  number = {4},
  pages = {1467--1481},
  author = {David Benkeser and Iv{\'{a}}n D{\'{\i}}az and Alex Luedtke and Jodi Segal and Daniel Scharfstein and Michael Rosenblum},
  title = {Improving precision and power in randomized trials for {COVID}-19 treatments using covariate adjustment,  for binary,  ordinal,  and time-to-event outcomes},
  journal = {Biometrics}
}




%%% COMPARING ESTIMATORS %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Colantuoni2015,
  doi = {10.1002/sim.6507},
  url = {https://doi.org/10.1002/sim.6507},
  year = {2015},
  month = apr,
  publisher = {Wiley},
  volume = {34},
  number = {18},
  pages = {2602--2617},
  author = {Elizabeth Colantuoni and Michael Rosenblum},
  title = {Leveraging prognostic baseline variables to gain precision in randomized trials},
  journal = {Statistics in Medicine}
}




%%% CONTINUOUS OUTCOMES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Tsiatis2008,
  doi = {10.1002/sim.3113},
  url = {https://doi.org/10.1002/sim.3113},
  year = {2008},
  month = oct,
  publisher = {Wiley},
  volume = {27},
  number = {23},
  pages = {4658--4677},
  author = {Anastasios A. Tsiatis and Marie Davidian and Min Zhang and Xiaomin Lu},
  title = {Covariate adjustment for two-sample treatment comparisons in randomized clinical trials: A principled yet flexible approach},
  journal = {Statistics in Medicine}
}

@article{Jiang2019,
  doi = {10.1080/01621459.2018.1527226},
  url = {https://doi.org/10.1080/01621459.2018.1527226},
  year = {2019},
  month = mar,
  publisher = {Informa {UK} Limited},
  volume = {114},
  number = {528},
  pages = {1854--1864},
  author = {Fei Jiang and Lu Tian and Haoda Fu and Takahiro Hasegawa and L. J. Wei},
  title = {Robust Alternatives to {ANCOVA} for Estimating the Treatment Effect via a Randomized Comparative Study},
  journal = {Journal of the American Statistical Association}
}

@article{Zhang2008,
  doi = {10.1111/j.1541-0420.2007.00976.x},
  url = {https://doi.org/10.1111/j.1541-0420.2007.00976.x},
  year = {2008},
  month = jan,
  publisher = {Wiley},
  volume = {64},
  number = {3},
  pages = {707--715},
  author = {Min Zhang and Anastasios A. Tsiatis and Marie Davidian},
  title = {Improving Efficiency of Inferences in Randomized Clinical Trials Using Auxiliary Covariates},
  journal = {Biometrics}
}




%%% BINARY OUTCOMES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Ge2011,
  doi = {10.1177/009286151104500409},
  url = {https://doi.org/10.1177/009286151104500409},
  year = {2011},
  month = jul,
  publisher = {Springer Science and Business Media {LLC}},
  volume = {45},
  number = {4},
  pages = {481--493},
  author = {Miaomiao Ge and L. Kathryn Durham and R. Daniel Meyer and Wangang Xie and Neal Thomas},
  title = {Covariate-Adjusted Difference in Proportions from Clinical Trials Using Logistic Regression and Weighted Risk Differences},
  journal = {Drug Information Journal}
}

@article{Moore2009_stat_med,
  doi = {10.1002/sim.3445},
  url = {https://doi.org/10.1002/sim.3445},
  year = {2009},
  month = jan,
  publisher = {Wiley},
  volume = {28},
  number = {1},
  pages = {39--64},
  author = {K. L. Moore and M. J. van der Laan},
  title = {Covariate adjustment in randomized trials with binary outcomes: Targeted maximum likelihood estimation},
  journal = {Statistics in Medicine}
}

@article{Steingrimsson2017,
  doi = {10.1016/j.cct.2016.12.026},
  url = {https://doi.org/10.1016/j.cct.2016.12.026},
  year = {2017},
  month = mar,
  publisher = {Elsevier {BV}},
  volume = {54},
  pages = {18--24},
  author = {Jon Arni Steingrimsson and Daniel F. Hanley and Michael Rosenblum},
  title = {Improving precision by adjusting for prognostic baseline variables in randomized trials with binary outcomes,  without regression model assumptions},
  journal = {Contemporary Clinical Trials}
}




%%% ORDINAL OUTCOMES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Diaz2015,
  doi = {10.1111/biom.12450},
  url = {https://doi.org/10.1111/biom.12450},
  year = {2015},
  month = nov,
  publisher = {Wiley},
  volume = {72},
  number = {2},
  pages = {422--431},
  author = {Iv{\'{a}}n D{\'{\i}}az and Elizabeth Colantuoni and Michael Rosenblum},
  title = {Enhanced precision in the analysis of randomized trials with ordinal outcomes},
  journal = {Biometrics}
}

@article{Fay2018,
  doi = {10.1002/sim.7890},
  url = {https://doi.org/10.1002/sim.7890},
  year = {2018},
  month = jul,
  publisher = {Wiley},
  volume = {37},
  number = {27},
  pages = {3991--4006},
  author = {Michael P. Fay and Yaakov Malinovsky},
  title = {Confidence intervals of the Mann-Whitney parameter that are compatible with the Wilcoxon-Mann-Whitney test},
  journal = {Statistics in Medicine}
}

@article{Vermeulen2014,
  doi = {10.1002/sim.6386},
  url = {https://doi.org/10.1002/sim.6386},
  year = {2014},
  month = dec,
  publisher = {Wiley},
  volume = {34},
  number = {6},
  pages = {1012--1030},
  author = {Karel Vermeulen and Olivier Thas and Stijn Vansteelandt},
  title = {Increasing the power of the Mann-Whitney test in randomized experiments through flexible covariate adjustment},
  journal = {Statistics in Medicine}
}

@article{Zhao2008,
  doi = {10.1002/sim.2912},
  url = {https://doi.org/10.1002/sim.2912},
  year = {2008},
  publisher = {Wiley},
  volume = {27},
  number = {3},
  pages = {462--468},
  author = {Yan D. Zhao and Dewi Rahardja and Yongming Qu},
  title = {Sample size calculation for the Wilcoxon{\textendash}Mann{\textendash}Whitney test adjusting for ties},
  journal = {Statistics in Medicine}
}




%%% TIME TO EVENT %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Brooks2013,
  doi = {10.1515/jci-2013-0001},
  url = {https://doi.org/10.1515/jci-2013-0001},
  year = {2013},
  month = nov,
  publisher = {Walter de Gruyter {GmbH}},
  volume = {1},
  number = {2},
  pages = {235--254},
  author = {Jordan C. Brooks and Mark J. van der Laan and Daniel E. Singer and Alan S. Go},
  title = {Targeted Minimum Loss-Based Estimation of Causal Effects in Right-Censored Survival Data with Time-Dependent Covariates: Warfarin,  Stroke,  and Death in Atrial Fibrillation},
  journal = {Journal of Causal Inference}
}

@article{Lin2017,
  doi = {10.1016/j.conctc.2017.09.004},
  url = {https://doi.org/10.1016/j.conctc.2017.09.004},
  year = {2017},
  month = dec,
  publisher = {Elsevier {BV}},
  volume = {8},
  pages = {147--155},
  author = {Ray S. Lin and Larry F. Le{\'{o}}n},
  title = {Estimation of treatment effects in weighted log-rank tests},
  journal = {Contemporary Clinical Trials Communications}
}

@article{Moore2009_j_biopharm_stat,
  doi = {10.1080/10543400903243017},
  url = {https://doi.org/10.1080/10543400903243017},
  year = {2009},
  month = oct,
  publisher = {Informa {UK} Limited},
  volume = {19},
  number = {6},
  pages = {1099--1131},
  author = {K. L. Moore and M. J. van der Laan},
  title = {Increasing Power in Randomized Trials with Right Censored Outcomes Through Covariate Adjustment},
  journal = {Journal of Biopharmaceutical Statistics}
}

@article{Parast2014,
  doi = {10.1080/01621459.2013.842488},
  url = {https://doi.org/10.1080/01621459.2013.842488},
  year = {2014},
  month = jan,
  publisher = {Informa {UK} Limited},
  volume = {109},
  number = {505},
  pages = {384--394},
  author = {Layla Parast and Lu Tian and Tianxi Cai},
  title = {Landmark Estimation of Survival and Treatment Effect in a Randomized Clinical Trial},
  journal = {Journal of the American Statistical Association}
}

@article{Stitelman2012,
  doi = {10.1515/1557-4679.1334},
  url = {https://doi.org/10.1515/1557-4679.1334},
  year = {2012},
  month = jan,
  publisher = {Walter de Gruyter {GmbH}},
  volume = {8},
  number = {1},
  author = {Ori M. Stitelman and Victor De Gruttola and Mark J. van der Laan},
  title = {A General Implementation of {TMLE} for Longitudinal Data Applied to Causal Inference in Survival Analysis},
  journal = {The International Journal of Biostatistics}
}




%%% RESTRICTED MEAN SURVIVAL TIME %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Chen2001,
  doi = {10.1111/j.0006-341x.2001.01030.x},
  url = {https://doi.org/10.1111/j.0006-341x.2001.01030.x},
  year = {2001},
  month = dec,
  publisher = {Wiley},
  volume = {57},
  number = {4},
  pages = {1030--1038},
  author = {Pei-Yun Chen and Anastasios A. Tsiatis},
  title = {Causal Inference on the Difference of the Restricted Mean Lifetime Between Two Groups},
  journal = {Biometrics}
}

@article{Diaz2018,
  doi = {10.1007/s10985-018-9428-5},
  url = {https://doi.org/10.1007/s10985-018-9428-5},
  year = {2018},
  month = feb,
  publisher = {Springer Science and Business Media {LLC}},
  volume = {25},
  number = {3},
  pages = {439--468},
  author = {Iv{\'{a}}n D{\'{\i}}az and Elizabeth Colantuoni and Daniel F. Hanley and Michael Rosenblum},
  title = {Improved precision in the analysis of randomized trials with survival outcomes,  without assuming proportional hazards},
  journal = {Lifetime Data Analysis}
}

@article{DiRienzo2001,
  doi = {10.1111/1467-9868.00310},
  url = {https://doi.org/10.1111/1467-9868.00310},
  year = {2001},
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  author = {A. G. DiRienzo and S. W. Lagakos},
  title = {Effects of model misspecification on tests of no randomized treatment effect arising from Cox{\textquotesingle}s proportional hazards model},
  journal = {Journal of the Royal Statistical Society: Series B (Statistical Methodology)}
}

@article{Eaton2020,
  title = {Designing clinical trials with (restricted) mean survival time endpoint: Practical considerations},
  volume = {17},
  ISSN = {1740-7753},
  url = {http://dx.doi.org/10.1177/1740774520905563},
  DOI = {10.1177/1740774520905563},
  number = {3},
  journal = {Clinical Trials},
  publisher = {SAGE Publications},
  author = {Eaton,  Anne and Therneau,  Terry and Le-Rademacher,  Jennifer},
  year = {2020},
  month = feb,
  pages = {285--294}
}




%%% SANDWICH REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Long2000,
  doi = {10.1080/00031305.2000.10474549},
  url = {https://doi.org/10.1080/00031305.2000.10474549},
  year = {2000},
  month = aug,
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  volume = {54},
  number = {3},
  pages = {217--224},
  author = {J. Scott Long and Laurie H. Ervin},
  title = {Using Heteroscedasticity Consistent Standard Errors in the Linear Regression Model},
  journal = {The American Statistician}
}

@article{Zeileis2004,
  doi = {10.18637/jss.v011.i10},
  url = {https://doi.org/10.18637/jss.v011.i10},
  year = {2004},
  publisher = {Foundation for Open Access Statistic},
  volume = {11},
  number = {10},
  author = {Achim Zeileis},
  title = {Econometric Computing with {HC} and {HAC} Covariance Matrix Estimators},
  journal = {Journal of Statistical Software}
}

@article{Ye2023,
  title = {Robust variance estimation for covariate-adjusted unconditional treatment effect in randomized clinical trials with binary outcomes},
  volume = {7},
  ISSN = {2475-4277},
  url = {http://dx.doi.org/10.1080/24754269.2023.2205802},
  DOI = {10.1080/24754269.2023.2205802},
  number = {2},
  journal = {Statistical Theory and Related Fields},
  publisher = {Informa UK Limited},
  author = {Ye,  Ting and Bannick,  Marlena and Yi,  Yanyao and Shao,  Jun},
  year = {2023},
  month = apr,
  pages = {159--163}
}


%%% VIOLATION OF INDEPENDENT INCREMENTS %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@techreport{rosenblum2015,
author={Rosenblum, Michael and Qian, Tianchen and Du, Yu and and Qiu, Huitong},
title = {Adaptive enrichment designs for randomized trials with delayed endpoints, using locally efficient estimators to improve precision},
file = {https://biostats.bepress.com/jhubiostat/paper275},
type = { https://biostats.bepress.com/jhubiostat/paper275},
series = {Dept. of Biostatistics Working Papers},
year = {2015}
}

@article{shoben2014violations,
  title={Violations of the independent increment assumption when using generalized estimating equation in longitudinal group sequential trials},
  author={Shoben, Abigail B and Emerson, Scott S},
  journal={Statistics in medicine},
  volume={33},
  number={29},
  pages={5041--5056},
  year={2014},
  publisher={Wiley Online Library}
}

@article{kim2020independent,
  title={Independent increments in group sequential tests: a review},
  author={Kim, KyungMann and Tsiatis, Anastasios A},
  journal={SORT-Statistics and Operations Research Transactions},
  pages={223--264},
    volume={44},
  number={2},
  year={2020}
}


%%% BOOTSTRAP REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@Book{Davidson1997,
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    note = {ISBN 0-521-57391-2},
    url = {http://statwww.epfl.ch/davison/BMA/},
  }

@book{Efron1994,
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  title = {An Introduction to the Bootstrap}
}

@article{Efron1987,
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  journal = {Journal of the American Statistical Association}
}

@article{DiCiccio1996,
  doi = {10.1214/ss/1032280214},
  url = {https://doi.org/10.1214/ss/1032280214},
  year = {1996},
  month = sep,
  publisher = {Institute of Mathematical Statistics},
  volume = {11},
  number = {3},
  author = {Thomas J. DiCiccio and Bradley Efron},
  title = {Bootstrap confidence intervals},
  journal = {Statistical Science}
}




%%% GENERALIZED LINEAR MODELS %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@book{DobsonBarnett2018,
  author = {Annette J. Dobson and Adrian G. Barnett},
  doi = {10.1201/9781315182780},
  url = {https://doi.org/10.1201/9781315182780},
  year = {2018},
  month = apr,
  publisher = {Chapman and Hall/{CRC}},
  title = {An Introduction to Generalized Linear Models,  Fourth Edition}
}

@article{McCullagh1980,
  doi = {10.1111/j.2517-6161.1980.tb01109.x},
  url = {https://doi.org/10.1111/j.2517-6161.1980.tb01109.x},
  year = {1980},
  month = jan,
  publisher = {Wiley},
  volume = {42},
  number = {2},
  pages = {109--127},
  author = {Peter McCullagh},
  title = {Regression Models for Ordinal Data},
  journal = {Journal of the Royal Statistical Society: Series B (Methodological)}
}




%%% MISTIE III EXAMPLE %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Hanley2019,
  doi = {10.1016/s0140-6736(19)30195-3},
  url = {https://doi.org/10.1016/s0140-6736(19)30195-3},
  year = {2019},
  month = mar,
  publisher = {Elsevier {BV}},
  volume = {393},
  number = {10175},
  pages = {1021--1032},
  author = {Daniel F Hanley and Richard E Thompson and Michael Rosenblum and Gayane Yenokyan and Karen Lane and Nichol McBee and Steven W Mayo and Amanda J Bistran-Hall and Dheeraj Gandhi and W Andrew Mould and Natalie Ullman and Hasan Ali and J Ricardo Carhuapoma and Carlos S Kase and Kennedy R Lees and Jesse Dawson and Alastair Wilson and Joshua F Betz and Elizabeth A Sugar and Yi Hao and Radhika Avadhani and Jean-Louis Caron and Mark R Harrigan and Andrew P Carlson and Diederik Bulters and David LeDoux and Judy Huang and Cully Cobb and Gaurav Gupta and Ryan Kitagawa and Michael R Chicoine and Hiren Patel and Robert Dodd and Paul J Camarata and Stacey Wolfe and Agnieszka Stadnik and P Lynn Money and Patrick Mitchell and Rosario Sarabia and Sagi Harnof and Pal Barzo and Andreas Unterberg and Jeanne S Teitelbaum and Weimin Wang and Craig S Anderson and A David Mendelow and Barbara Gregson and Scott Janis and Paul Vespa and Wendy Ziai and Mario Zuccarello and Issam A Awad and Azmil Abdul-Rahim and Amal Abou-Hamden and Michael Abraham and Azam Ahmed and Carlos Alarcon Alba and E. Francois Aldrich and David Altschul and Sepideh Amin-Hanjani and Doug Anderson and Safdar Ansari and David Antezana and Agnieszka Ardelt and Fuat Arikan and Marcelino Baguena and Alexandra Baker and Steven J. Barrer and Kyra J. Becker and Thomas Bergman and Azize Bostr\"{o}m and Jamie Braun and Peter Brindley and William C. Broaddus and Robert Brown and Andras Buki and Bing Cao and Ying Cao and Julian Carrion-Penagos and Julio Chalela and Tiffany Chang and Indalecio Moran Chorro and Shakeel Chowdhry and Luisa Corral and Laszlo Csiba and Jason Davies and Alberto Torres D{\'{\i}}az and Colin P. Derdeyn and Michael Diringer and Rachel Dlugash and Robert Ecker and Tracey Economas and Pedro Enriquez and Erzsebet Ezer and Yuhua Fan and Hua Feng and Douglas Franz and W. David Freeman and Matthew Fusco and Walter Galicich and Mary Leigh Gelea and Joshua Goldstein and Alejandro Carrasco Gonzalez and Christina Grabarits and Steven Greenberg and Daryl Gress and Eugene Gu and Christiana Hall and Fernando Mu{\~{n}}oz Hernandez and Robert Hoesch and Brian L. Hoh and Jennifer Houser and Rong Hu and Yi Huang and Mohammed Akbar Hussain and Salvatore Insinga and Ashutosh Jadhav and Jennifer Jaffe and Babak S. Jahromi and Jack Jallo and Michael James and Robert F. James and Brian Jankowitz and Esther Jeon and Draga Jichici and Karin Jonczak and Ben Jonker and Nicki Karlen and Naureen Keric and Thomas Kerz and Jared Knopman and Carolyn Koenig and Satish Krishnamurthy and Avinash Kumar and Inam Kureshi and John Laidlaw and Arun Lakhanpal and Julius Gene Latorre and Dana Leifer and James Leiphart and Sarah Lenington and Yunke Li and George Lopez and Darren Lovick and Christianto Lumenta and Jinbiao Luo and Matthew B. Maas and Joel MacDonald and Larami MacKenzie and Vikram Madan and Ryan Majkowski and Otto Major and Rishi Malhorta and Marc Malkoff and Halinder Mangat and Ahmed Maswadeh and Charles Matouk and Kate McArthur and Scott McCaul and Joshua Medow and Geza Mezey and Janet Mighty and David Miller and Krishna K. Mohan and Keith Muir and Lorenzo Mu{\~{n}}oz and Peter Nakaji and Alex Nee and Saman Nekoovaght-Tak and Paul Nyquist and Roddy O{\textquotesingle}Kane and Mohamed Okasha and Cian O{\textquotesingle}Kelly and Noeleen Ostapkovich and Aditya Pandey and Adrian Parry-Jones and Krissia Rivera Perla and Ania Pollack and Sean Polster and Nader Pouratian and Terry Quinn and Ventatakrishna Rajajee and Kesava Reddy and Mohammed Rehman and Ronald Reimer and Fred Rincon and Igor Rybinnik and Baltasar Sanchez and Lauren Sansing and Michael Schneck and Ludwig Schuerer and David Schul and Jeffrey Schweitzer and David B. Seder and Donald Seyfried and Kevin Sheth and Alejandro Spiotta and Michael Stechison and Katalin Szabo and Gonzalo Tamayo and Krisztian Tanczos and Philipp Taussky and John Terry and Fernando Testai and Kathrine Thomas and Carol B. Thompson and Gregory Thompson and James C. Torner and Huy Tran and Kristi Tucker and Lior Ungar and Panos Varelas and Nataly Montano Vargas and Hartmut Vatter and Chitra Venkatasubramanian and Krista Vermillion and Dennis Vollmer and Yan Wang and Ying Wang and Jiajun Wen and Louis Tony Whitworth and Byron Willis and Myriha Wrencher and Shawn E. Wright and Yongge Xu and Lisa Yanase and Xuxia Yi and Zhiyuan Yu and Ali Zomorodi},
  title = {Efficacy and safety of minimally invasive surgery with thrombolysis in intracerebral haemorrhage evacuation ({MISTIE} {III}): a randomised,  controlled,  open-label,  blinded endpoint phase 3 trial},
  journal = {The Lancet}
}

@article{Bath2012,
  doi = {10.1161/strokeaha.111.641456},
  url = {https://doi.org/10.1161/strokeaha.111.641456},
  year = {2012},
  month = apr,
  publisher = {Ovid Technologies (Wolters Kluwer Health)},
  volume = {43},
  number = {4},
  pages = {1171--1178},
  author = {Philip M.W. Bath and Kennedy R. Lees and Peter D. Schellinger and Hernan Altman and Martin Bland and Cheryl Hogg and George Howard and Jeffrey L. Saver},
  title = {Statistical Analysis of the Primary Outcome in Acute Stroke Trials},
  journal = {Stroke}
}

@article{Chaisinanunkul2015,
  doi = {10.1161/strokeaha.114.008547},
  url = {https://doi.org/10.1161/strokeaha.114.008547},
  year = {2015},
  month = aug,
  publisher = {Ovid Technologies (Wolters Kluwer Health)},
  volume = {46},
  number = {8},
  pages = {2238--2243},
  author = {Napasri Chaisinanunkul and Opeolu Adeoye and Roger J. Lewis and James C. Grotta and Joseph Broderick and Tudor G. Jovin and Raul G. Nogueira and Jordan J. Elm and Todd Graves and Scott Berry and Kennedy R. Lees and Andrew D. Barreto and Jeffrey L. Saver and Anthony Furlan and Blaise Baxter and Helmi L. Lutsep and Marc Ribo and Olav Jansen and Rishi Gupta and Vitor Mendes Pereira and},
  title = {Adopting a Patient-Centered Approach to Primary Outcome Analysis of Acute Stroke Trials Using a Utility-Weighted Modified Rankin Scale},
  journal = {Stroke}
}




%%% CTN-0003 EXAMPLE REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Ling2009,
  doi = {10.1111/j.1360-0443.2008.02455.x},
  url = {https://doi.org/10.1111/j.1360-0443.2008.02455.x},
  year = {2009},
  month = feb,
  publisher = {Wiley},
  volume = {104},
  number = {2},
  pages = {256--265},
  author = {Walter Ling and Maureen Hillhouse and Catherine Domier and Geetha Doraimani and Jeremy Hunter and Christie Thomas and Jessica Jenkins and Albert Hasson and Jeffrey Annon and Andrew Saxon and Jeffrey Selzer and Joshua Boverman and Richard Bilangi},
  title = {Buprenorphine tapering schedule and illicit opioid use},
  journal = {Addiction}
}




%%% CTN-030 EXAMPLE REFERENCES %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{Campbell2014,
  doi = {10.1176/appi.ajp.2014.13081055},
  url = {https://doi.org/10.1176/appi.ajp.2014.13081055},
  year = {2014},
  month = jun,
  publisher = {American Psychiatric Association Publishing},
  volume = {171},
  number = {6},
  pages = {683--690},
  author = {Aimee N.C. Campbell and Edward V. Nunes and Abigail G. Matthews and Maxine Stitzer and Gloria M. Miele and Daniel Polsky and Eva Turrigiano and Scott Walters and Erin A. McClure and Tiffany L. Kyle and Aimee Wahle and Paul Van Veldhuisen and Bruce Goldman and Dean Babcock and Patricia Quinn Stabile and Theresa Winhusen and Udi E. Ghitza},
  title = {Internet-Delivered Treatment for Substance Abuse: A Multisite Randomized Controlled Trial},
  journal = {American Journal of Psychiatry}
}