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DESCRIPTION
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DESCRIPTION
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Package: raptr
Type: Package
Title: Representative and Adequate Prioritization Toolkit in R
Version: 1.0.1
Authors@R: c(person(c("Jeffrey", "O"), "Hanson",
email="jeffrey.hanson@uqconnect.edu.au", role = c("aut", "cre")),
person(c("Jonathan", "R"), "Rhodes", role = c("aut")),
person(c("Hugh", "P"), "Possingham", role = c("aut")),
person(c("Richard", "A"), "Fuller", role = c("aut")))
Description: Biodiversity is in crisis. The overarching aim of conservation
is to preserve biodiversity patterns and processes. To this end, protected
areas are established to buffer species and preserve biodiversity processes.
But resources are limited and so protected areas must be cost-effective.
This package contains tools to generate plans for protected areas
(prioritizations), using spatially explicit targets for biodiversity
patterns and processes. To obtain solutions in a feasible amount of time,
this package uses the commercial 'Gurobi' software (obtained from
<https://www.gurobi.com/>). For more information on using
this package, see Hanson et al. (2018) <doi:10.1111/2041-210X.12862>.
Imports:
utils,
methods,
stats,
graphics,
grDevices,
sp (>= 1.4.6),
Matrix (>= 1.4.1),
assertthat (>= 0.2.1),
boot (>= 1.3.28),
PBSmapping (>= 2.73.0),
scales (>= 1.2.0),
shape (>= 1.4.6),
adehabitatHR (>= 0.4.19),
RColorBrewer (>= 1.1.3),
ggplot2 (>= 3.4.0),
hypervolume (>= 2.0.7),
ks (>= 1.13.5),
mvtnorm (>= 1.1.3),
withr (>= 2.5.0),
Depends:
R (>= 4.0.0),
sf (>= 1.0.9),
terra (>= 1.6.47)
Suggests:
knitr,
roxygen2,
rmarkdown,
testthat,
RgoogleMaps (>= 1.4.5.3),
dplyr (>= 1.0.8),
vegan (>= 2.6.2),
gurobi (>= 8.0.0),
gridExtra (>= 2.3),
rgl (>= 1.0.1)
LinkingTo: Rcpp, RcppEigen, BH
LazyData: true
License: GPL-3
Encoding: UTF-8
Language: en-US
URL: https://jeffrey-hanson.com/raptr/, https://github.com/jeffreyhanson/raptr
BugReports: https://github.com/jeffreyhanson/raptr/issues
VignetteBuilder: knitr
Collate:
'RcppExports.R'
'raptr-internal.R'
'generics.R'
'DemandPoints.R'
'misc.R'
'PlanningUnitPoints.R'
'AttributeSpace.R'
'AttributeSpaces.R'
'GurobiOpts.R'
'ManualOpts.R'
'calcSpeciesAverageInPus.R'
'calcBoundaryData.R'
'RapData.R'
'RapReliableOpts.R'
'RapResults.R'
'RapUnreliableOpts.R'
'RapUnsolved.R'
'RapSolved.R'
'convert2PolySet.R'
'data.R'
'deprecated.R'
'package.R'
'rap.R'
'rrap.proportion.held.R'
'sim.pus.R'
'sim.space.R'
'sim.species.R'
'urap.proportion.held.R'
'zzz.R'
RoxygenNote: 7.3.1
NeedsCompilation: yes
Roxygen: list(markdown = TRUE)