Merge pull request #6 from jgomezdans/cleanup

Done!

Author: jgomezdans

.gitignore

@@ -95,7 +95,7 @@
     {
      "data": {
       "application/vnd.jupyter.widget-view+json": {
-       "model_id": "5b6cbdb1c93342218f0ba22ae6d3e7ab",
+       "model_id": "88598ffd4f9f456d9842e81415aa34b2",
        "version_major": 2,
        "version_minor": 0
       },

02-MODIS_LAI_exploration.ipynb

@@ -118,7 +118,7 @@
     {
      "data": {
       "application/vnd.jupyter.widget-view+json": {
-       "model_id": "43f5f237e7344ec2b84ea41f3e7c5d86",
+       "model_id": "c92a5e2c89f4421e971bf06efd4ae41c",
        "version_major": 2,
        "version_minor": 0
       },
@@ -162,15 +162,15 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 6,
+   "execution_count": 3,
    "metadata": {
     "scrolled": false
    },
    "outputs": [
     {
      "data": {
       "application/vnd.jupyter.widget-view+json": {
-       "model_id": "e9f31863950e41a6be2206269ca3693b",
+       "model_id": "e1d16e2e54a44c4b9396db6433c272c1",
        "version_major": 2,
        "version_minor": 0
       },
@@ -196,13 +196,13 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 9,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
     {
      "data": {
       "application/vnd.jupyter.widget-view+json": {
-       "model_id": "a5c1b724ef654b7a988905eb29114147",
+       "model_id": "2d7a1cfb6e414bc898e77b2f044df4f4",
        "version_major": 2,
        "version_minor": 0
       },

04-WOFOST_playground.ipynb

@@ -12,15 +12,15 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 2,
+   "execution_count": 1,
    "metadata": {},
    "outputs": [
     {
-     "name": "stdout",
+     "name": "stderr",
      "output_type": "stream",
      "text": [
-      "The autoreload extension is already loaded. To reload it, use:\n",
-      "  %reload_ext autoreload\n"
+      "/home/ucfajlg/.local/lib/python3.6/site-packages/tqdm/autonotebook/__init__.py:14: TqdmExperimentalWarning: Using `tqdm.autonotebook.tqdm` in notebook mode. Use `tqdm.tqdm` instead to force console mode (e.g. in jupyter console)\n",
+      "  \" (e.g. in jupyter console)\", TqdmExperimentalWarning)\n"
      ]
     }
    ],
@@ -116,15 +116,15 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 40,
+   "execution_count": 3,
    "metadata": {
     "scrolled": false
    },
    "outputs": [
     {
      "data": {
       "application/vnd.jupyter.widget-view+json": {
-       "model_id": "e5374d8943fa4a6eb9c45e50cf26d078",
+       "model_id": "6c3afc4e926a4b619351e95bbab84ada",
        "version_major": 2,
        "version_minor": 0
       },
@@ -137,42 +137,8 @@
     }
    ],
    "source": [
-    "def run_enkf_widget():\n",
-    "    start_date = dt.datetime(2011, 7, 1)\n",
-    "    end_date = dt.datetime(2011, 10, 15)\n",
-    "\n",
-    "    dates = pd.date_range(start_date, end_date, freq='D')\n",
-    "\n",
-    "    options = [(date.strftime(' %d %b '), date) for date in dates]\n",
-    "    index = (0, len(options) - 1)\n",
-    "    integration_slider = widgets.SelectionRangeSlider(\n",
-    "        options=options,\n",
-    "        index=index,\n",
-    "        description='Observation period',\n",
-    "        orientation='horizontal',\n",
-    "        layout={'width': '600px'},\n",
-    "    )\n",
-    "\n",
-    "    widgets.interact_manual(run_ensemble,\n",
-    "                            n_ensemble=widgets.IntSlider(\n",
-    "                                min=2, max=1000, value=10, description=\"Number of ensemble members\"),\n",
-    "                            ens_param_inflation=widgets.FloatSlider(min=0.1, max=5, value=1.,\n",
-    "                                    description=\"Increase the ensemble dispersion/unc\"),\n",
-    "                            obs_period=integration_slider,\n",
-    "                            sigma_lai=widgets.FloatSlider(\n",
-    "                                min=0.01, max=0.5, value=0.1, description=\"Relative Uncertainty in LAI\"),\n",
-    "                            sigma_sm=widgets.FloatSlider(\n",
-    "                                min=0.01, max=0.5, value=0.25, description=\"Relative Uncertainty in SM\"),\n",
-    "                            n_obs=widgets.IntSlider(min=1, max=30, value=10,\n",
-    "                                                    description=\"Number of observations to assimilate\"),\n",
-    "                            assim_lai=widgets.Checkbox(\n",
-    "                                value=True, help=\"Assimilate LAI observations\"),\n",
-    "                            assim_sm=widgets.Checkbox(\n",
-    "                                value=True, help=\"Assimilate soil moisture observations\"),\n",
-    "                            \n",
-    "                            )\n",
-    "run_enkf_widget()\n",
-    "    #results, observations = run_ensemble(10, assim_lai=False)"
+    "\n",
+    "run_enkf_widget();\n"
    ]
   },
   {