dag.svg

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<!-- Title: snakemake_dag Pages: 1 -->
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<!-- 1 -->
<g id="node2" class="node">
<title>1</title>
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<text text-anchor="middle" x="37" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="37" y="-90" font-family="sans" font-size="10.00">metric: iou</text>
<text text-anchor="middle" x="37" y="-79" font-family="sans" font-size="10.00">scenario: _</text>
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<!-- 1&#45;&gt;0 -->
<g id="edge1" class="edge">
<title>1&#45;&gt;0</title>
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<!-- 2 -->
<g id="node3" class="node">
<title>2</title>
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<text text-anchor="middle" x="79" y="-164.5" font-family="sans" font-size="10.00">calculate_metrics_</text>
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<!-- 2&#45;&gt;1 -->
<g id="edge15" class="edge">
<title>2&#45;&gt;1</title>
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<!-- 5 -->
<g id="node6" class="node">
<title>5</title>
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<text text-anchor="middle" x="129" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="129" y="-90" font-family="sans" font-size="10.00">metric: w1</text>
<text text-anchor="middle" x="129" y="-79" font-family="sans" font-size="10.00">scenario: _</text>
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<!-- 2&#45;&gt;5 -->
<g id="edge18" class="edge">
<title>2&#45;&gt;5</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="110.5,-126.48 113.3,-116.27 104.74,-122.51 110.5,-126.48"/>
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<!-- 3 -->
<g id="node4" class="node">
<title>3</title>
<path fill="none" stroke="#88d856" stroke-width="2" d="M132.5,-257C132.5,-257 25.5,-257 25.5,-257 19.5,-257 13.5,-251 13.5,-245 13.5,-245 13.5,-233 13.5,-233 13.5,-227 19.5,-221 25.5,-221 25.5,-221 132.5,-221 132.5,-221 138.5,-221 144.5,-227 144.5,-233 144.5,-233 144.5,-245 144.5,-245 144.5,-251 138.5,-257 132.5,-257"/>
<text text-anchor="middle" x="79" y="-242" font-family="sans" font-size="10.00">run_simulation_</text>
<text text-anchor="middle" x="79" y="-231" font-family="sans" font-size="10.00">use_case: infection_period</text>
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<!-- 3&#45;&gt;2 -->
<g id="edge16" class="edge">
<title>3&#45;&gt;2</title>
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<!-- 4 -->
<g id="node5" class="node">
<title>4</title>
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<text text-anchor="middle" x="155" y="-314" font-family="sans" font-size="10.00">find_simulation_parameters_</text>
<text text-anchor="middle" x="155" y="-303" font-family="sans" font-size="10.00">property: incubation_time</text>
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<!-- 4&#45;&gt;3 -->
<g id="edge17" class="edge">
<title>4&#45;&gt;3</title>
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<!-- 8 -->
<g id="node9" class="node">
<title>8</title>
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<text text-anchor="middle" x="230" y="-242" font-family="sans" font-size="10.00">run_simulation_</text>
<text text-anchor="middle" x="230" y="-231" font-family="sans" font-size="10.00">use_case: infection_spread</text>
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<!-- 4&#45;&gt;8 -->
<g id="edge21" class="edge">
<title>4&#45;&gt;8</title>
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<title>5&#45;&gt;0</title>
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<!-- 6 -->
<g id="node7" class="node">
<title>6</title>
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<text text-anchor="middle" x="230" y="-90" font-family="sans" font-size="10.00">metric: deltapred</text>
<text text-anchor="middle" x="230" y="-79" font-family="sans" font-size="10.00">scenario: _</text>
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<!-- 6&#45;&gt;0 -->
<g id="edge3" class="edge">
<title>6&#45;&gt;0</title>
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<!-- 7 -->
<g id="node8" class="node">
<title>7</title>
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<text text-anchor="middle" x="230" y="-164.5" font-family="sans" font-size="10.00">calculate_metrics_</text>
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<!-- 7&#45;&gt;6 -->
<g id="edge19" class="edge">
<title>7&#45;&gt;6</title>
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<!-- 8&#45;&gt;7 -->
<g id="edge20" class="edge">
<title>8&#45;&gt;7</title>
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<!-- 9 -->
<g id="node10" class="node">
<title>9</title>
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<text text-anchor="middle" x="349" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="349" y="-90" font-family="sans" font-size="10.00">metric: iou</text>
<text text-anchor="middle" x="349" y="-79" font-family="sans" font-size="10.00">scenario: generation1</text>
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<!-- 9&#45;&gt;0 -->
<g id="edge4" class="edge">
<title>9&#45;&gt;0</title>
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<!-- 10 -->
<g id="node11" class="node">
<title>10</title>
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<text text-anchor="middle" x="669" y="-164.5" font-family="sans" font-size="10.00">calculate_metrics_</text>
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<!-- 10&#45;&gt;9 -->
<g id="edge22" class="edge">
<title>10&#45;&gt;9</title>
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<!-- 13 -->
<g id="node14" class="node">
<title>13</title>
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<text text-anchor="middle" x="477" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="477" y="-90" font-family="sans" font-size="10.00">metric: w1</text>
<text text-anchor="middle" x="477" y="-79" font-family="sans" font-size="10.00">scenario: generation1</text>
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<!-- 10&#45;&gt;13 -->
<g id="edge25" class="edge">
<title>10&#45;&gt;13</title>
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<!-- 14 -->
<g id="node15" class="node">
<title>14</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M648,-113C648,-113 562,-113 562,-113 556,-113 550,-107 550,-101 550,-101 550,-84 550,-84 550,-78 556,-72 562,-72 562,-72 648,-72 648,-72 654,-72 660,-78 660,-84 660,-84 660,-101 660,-101 660,-107 654,-113 648,-113"/>
<text text-anchor="middle" x="605" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="605" y="-90" font-family="sans" font-size="10.00">metric: iou</text>
<text text-anchor="middle" x="605" y="-79" font-family="sans" font-size="10.00">scenario: generation2</text>
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<!-- 10&#45;&gt;14 -->
<g id="edge26" class="edge">
<title>10&#45;&gt;14</title>
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<!-- 15 -->
<g id="node16" class="node">
<title>15</title>
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<text text-anchor="middle" x="733" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="733" y="-90" font-family="sans" font-size="10.00">metric: w1</text>
<text text-anchor="middle" x="733" y="-79" font-family="sans" font-size="10.00">scenario: generation2</text>
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<!-- 10&#45;&gt;15 -->
<g id="edge27" class="edge">
<title>10&#45;&gt;15</title>
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<!-- 16 -->
<g id="node17" class="node">
<title>16</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M904,-113C904,-113 818,-113 818,-113 812,-113 806,-107 806,-101 806,-101 806,-84 806,-84 806,-78 812,-72 818,-72 818,-72 904,-72 904,-72 910,-72 916,-78 916,-84 916,-84 916,-101 916,-101 916,-107 910,-113 904,-113"/>
<text text-anchor="middle" x="861" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="861" y="-90" font-family="sans" font-size="10.00">metric: iou</text>
<text text-anchor="middle" x="861" y="-79" font-family="sans" font-size="10.00">scenario: generation3</text>
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<!-- 10&#45;&gt;16 -->
<g id="edge28" class="edge">
<title>10&#45;&gt;16</title>
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<!-- 17 -->
<g id="node18" class="node">
<title>17</title>
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<text text-anchor="middle" x="989" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="989" y="-90" font-family="sans" font-size="10.00">metric: w1</text>
<text text-anchor="middle" x="989" y="-79" font-family="sans" font-size="10.00">scenario: generation3</text>
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<!-- 10&#45;&gt;17 -->
<g id="edge29" class="edge">
<title>10&#45;&gt;17</title>
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<!-- 11 -->
<g id="node12" class="node">
<title>11</title>
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<text text-anchor="middle" x="669" y="-242" font-family="sans" font-size="10.00">run_simulation_</text>
<text text-anchor="middle" x="669" y="-231" font-family="sans" font-size="10.00">use_case: illness_period</text>
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<!-- 11&#45;&gt;10 -->
<g id="edge23" class="edge">
<title>11&#45;&gt;10</title>
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<!-- 12 -->
<g id="node13" class="node">
<title>12</title>
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<text text-anchor="middle" x="669" y="-314" font-family="sans" font-size="10.00">find_simulation_parameters_</text>
<text text-anchor="middle" x="669" y="-303" font-family="sans" font-size="10.00">property: serial_interval</text>
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<!-- 12&#45;&gt;11 -->
<g id="edge24" class="edge">
<title>12&#45;&gt;11</title>
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<!-- 13&#45;&gt;0 -->
<g id="edge5" class="edge">
<title>13&#45;&gt;0</title>
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<!-- 14&#45;&gt;0 -->
<g id="edge6" class="edge">
<title>14&#45;&gt;0</title>
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<!-- 15&#45;&gt;0 -->
<g id="edge7" class="edge">
<title>15&#45;&gt;0</title>
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<!-- 16&#45;&gt;0 -->
<g id="edge8" class="edge">
<title>16&#45;&gt;0</title>
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<!-- 17&#45;&gt;0 -->
<g id="edge9" class="edge">
<title>17&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M934.75,-71.02C903.55,-59.23 865.04,-44.69 836.68,-33.98"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="838.24,-30.83 827.64,-30.57 835.76,-37.38 838.24,-30.83"/>
</g>
<!-- 18 -->
<g id="node19" class="node">
<title>18</title>
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<text text-anchor="middle" x="1099" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="1099" y="-90" font-family="sans" font-size="10.00">metric: iou</text>
<text text-anchor="middle" x="1099" y="-79" font-family="sans" font-size="10.00">scenario: _</text>
</g>
<!-- 18&#45;&gt;0 -->
<g id="edge10" class="edge">
<title>18&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1061.06,-74.74C1058.36,-73.75 1055.65,-72.83 1053,-72 978.43,-48.72 888.41,-32.79 837.42,-24.84"/>
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<!-- 19 -->
<g id="node20" class="node">
<title>19</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M1181,-185C1181,-185 1109,-185 1109,-185 1103,-185 1097,-179 1097,-173 1097,-173 1097,-161 1097,-161 1097,-155 1103,-149 1109,-149 1109,-149 1181,-149 1181,-149 1187,-149 1193,-155 1193,-161 1193,-161 1193,-173 1193,-173 1193,-179 1187,-185 1181,-185"/>
<text text-anchor="middle" x="1145" y="-164.5" font-family="sans" font-size="10.00">calculate_metrics_</text>
</g>
<!-- 19&#45;&gt;18 -->
<g id="edge30" class="edge">
<title>19&#45;&gt;18</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1133.63,-148.08C1129.14,-141.01 1123.86,-132.68 1118.79,-124.69"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1121.8,-122.9 1113.49,-116.33 1115.89,-126.65 1121.8,-122.9"/>
</g>
<!-- 21 -->
<g id="node22" class="node">
<title>21</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M1216,-113C1216,-113 1166,-113 1166,-113 1160,-113 1154,-107 1154,-101 1154,-101 1154,-84 1154,-84 1154,-78 1160,-72 1166,-72 1166,-72 1216,-72 1216,-72 1222,-72 1228,-78 1228,-84 1228,-84 1228,-101 1228,-101 1228,-107 1222,-113 1216,-113"/>
<text text-anchor="middle" x="1191" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="1191" y="-90" font-family="sans" font-size="10.00">metric: w1</text>
<text text-anchor="middle" x="1191" y="-79" font-family="sans" font-size="10.00">scenario: _</text>
</g>
<!-- 19&#45;&gt;21 -->
<g id="edge32" class="edge">
<title>19&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1156.37,-148.08C1160.86,-141.01 1166.14,-132.68 1171.21,-124.69"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1174.11,-126.65 1176.51,-116.33 1168.2,-122.9 1174.11,-126.65"/>
</g>
<!-- 20 -->
<g id="node21" class="node">
<title>20</title>
<path fill="none" stroke="#88d856" stroke-width="2" d="M1201,-257C1201,-257 1089,-257 1089,-257 1083,-257 1077,-251 1077,-245 1077,-245 1077,-233 1077,-233 1077,-227 1083,-221 1089,-221 1089,-221 1201,-221 1201,-221 1207,-221 1213,-227 1213,-233 1213,-233 1213,-245 1213,-245 1213,-251 1207,-257 1201,-257"/>
<text text-anchor="middle" x="1145" y="-242" font-family="sans" font-size="10.00">run_simulation_</text>
<text text-anchor="middle" x="1145" y="-231" font-family="sans" font-size="10.00">use_case: infectious_period</text>
</g>
<!-- 20&#45;&gt;19 -->
<g id="edge31" class="edge">
<title>20&#45;&gt;19</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1145,-220.34C1145,-213.75 1145,-206.08 1145,-198.67"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1148.5,-198.93 1145,-188.93 1141.5,-198.93 1148.5,-198.93"/>
</g>
<!-- 21&#45;&gt;0 -->
<g id="edge11" class="edge">
<title>21&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1153.11,-74.58C1150.39,-73.63 1147.67,-72.76 1145,-72 1036.31,-41.21 903.14,-27.25 837.51,-21.87"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="837.83,-18.39 827.58,-21.09 837.28,-25.36 837.83,-18.39"/>
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<!-- 22 -->
<g id="node23" class="node">
<title>22</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M1332,-113C1332,-113 1258,-113 1258,-113 1252,-113 1246,-107 1246,-101 1246,-101 1246,-84 1246,-84 1246,-78 1252,-72 1258,-72 1258,-72 1332,-72 1332,-72 1338,-72 1344,-78 1344,-84 1344,-84 1344,-101 1344,-101 1344,-107 1338,-113 1332,-113"/>
<text text-anchor="middle" x="1295" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="1295" y="-90" font-family="sans" font-size="10.00">metric: deltaprob</text>
<text text-anchor="middle" x="1295" y="-79" font-family="sans" font-size="10.00">scenario: childcare</text>
</g>
<!-- 22&#45;&gt;0 -->
<g id="edge12" class="edge">
<title>22&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1245.2,-74.04C1242.44,-73.29 1239.69,-72.61 1237,-72 1092.09,-39.28 915.48,-25.76 837.41,-21.1"/>
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</g>
<!-- 23 -->
<g id="node24" class="node">
<title>23</title>
<path fill="none" stroke="#56c1d8" stroke-width="2" d="M1444,-185C1444,-185 1372,-185 1372,-185 1366,-185 1360,-179 1360,-173 1360,-173 1360,-161 1360,-161 1360,-155 1366,-149 1372,-149 1372,-149 1444,-149 1444,-149 1450,-149 1456,-155 1456,-161 1456,-161 1456,-173 1456,-173 1456,-179 1450,-185 1444,-185"/>
<text text-anchor="middle" x="1408" y="-164.5" font-family="sans" font-size="10.00">calculate_metrics_</text>
</g>
<!-- 23&#45;&gt;22 -->
<g id="edge33" class="edge">
<title>23&#45;&gt;22</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1380.07,-148.08C1367.15,-139.79 1351.53,-129.77 1337.22,-120.59"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1339.45,-117.86 1329.15,-115.41 1335.67,-123.75 1339.45,-117.86"/>
</g>
<!-- 25 -->
<g id="node26" class="node">
<title>25</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M1441.5,-113C1441.5,-113 1374.5,-113 1374.5,-113 1368.5,-113 1362.5,-107 1362.5,-101 1362.5,-101 1362.5,-84 1362.5,-84 1362.5,-78 1368.5,-72 1374.5,-72 1374.5,-72 1441.5,-72 1441.5,-72 1447.5,-72 1453.5,-78 1453.5,-84 1453.5,-84 1453.5,-101 1453.5,-101 1453.5,-107 1447.5,-113 1441.5,-113"/>
<text text-anchor="middle" x="1408" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="1408" y="-90" font-family="sans" font-size="10.00">metric: deltaprob</text>
<text text-anchor="middle" x="1408" y="-79" font-family="sans" font-size="10.00">scenario: school</text>
</g>
<!-- 23&#45;&gt;25 -->
<g id="edge35" class="edge">
<title>23&#45;&gt;25</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1408,-148.08C1408,-141.58 1408,-134.01 1408,-126.62"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1411.5,-126.8 1408,-116.8 1404.5,-126.8 1411.5,-126.8"/>
</g>
<!-- 26 -->
<g id="node27" class="node">
<title>26</title>
<path fill="none" stroke="#d85656" stroke-width="2" d="M1560.5,-113C1560.5,-113 1483.5,-113 1483.5,-113 1477.5,-113 1471.5,-107 1471.5,-101 1471.5,-101 1471.5,-84 1471.5,-84 1471.5,-78 1477.5,-72 1483.5,-72 1483.5,-72 1560.5,-72 1560.5,-72 1566.5,-72 1572.5,-78 1572.5,-84 1572.5,-84 1572.5,-101 1572.5,-101 1572.5,-107 1566.5,-113 1560.5,-113"/>
<text text-anchor="middle" x="1522" y="-101" font-family="sans" font-size="10.00">plot_metrics_</text>
<text text-anchor="middle" x="1522" y="-90" font-family="sans" font-size="10.00">metric: deltaprob</text>
<text text-anchor="middle" x="1522" y="-79" font-family="sans" font-size="10.00">scenario: sensitivity</text>
</g>
<!-- 23&#45;&gt;26 -->
<g id="edge36" class="edge">
<title>23&#45;&gt;26</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1436.18,-148.08C1449.21,-139.79 1464.97,-129.77 1479.41,-120.59"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="1481.01,-123.72 1487.57,-115.4 1477.25,-117.81 1481.01,-123.72"/>
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<!-- 24 -->
<g id="node25" class="node">
<title>24</title>
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<text text-anchor="middle" x="1408" y="-242" font-family="sans" font-size="10.00">run_simulation_</text>
<text text-anchor="middle" x="1408" y="-231" font-family="sans" font-size="10.00">use_case: group_quarantine</text>
</g>
<!-- 24&#45;&gt;23 -->
<g id="edge34" class="edge">
<title>24&#45;&gt;23</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1408,-220.34C1408,-213.75 1408,-206.08 1408,-198.67"/>
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<!-- 25&#45;&gt;0 -->
<g id="edge13" class="edge">
<title>25&#45;&gt;0</title>
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<!-- 26&#45;&gt;0 -->
<g id="edge14" class="edge">
<title>26&#45;&gt;0</title>
<path fill="none" stroke="grey" stroke-width="2" d="M1470.71,-73.75C1468.12,-73.1 1465.54,-72.51 1463,-72 1229.88,-24.91 942.94,-19.25 837.95,-18.87"/>
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