GillspySolver can't use a negative seed

[ahellander]

Not sure if this is a bug or not, but it should be documented. It causes a problem for molnsutil, which generates negative seed bases.

[johnabel]

Noted, this will be documented. I believe this is true of StochKit2 as well?

On Fri, Jul 3, 2015 at 1:12 AM, Andreas Hellander notifications@github.com
wrote:

Not sure if this is a bug or not, but it should be documented. It causes a
problem for molnsutil, which generates negative seed bases.

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#13.

John H. Abel
PhD Candidate, Systems Biology
Harvard University
Email: j jha@engr.ucsb.eduohnhabel@g.harvard.edu
Tel: (401)787-4253

[ahellander]

I assume the problem is really StochKit. Negative I could live with, but now it doesn't seem to support 64-bit integers. This is annoying.

[ahellander]

I can reflect the seed_base in molnsutil to make it positive (@briandrawert, right??) but I will handle the 64-bit issue in Gillespy instead.

[ahellander]

This is fixed in the outstanding PR