From 4eb850c4e13010fcea083af06b2b5ad955f0bc33 Mon Sep 17 00:00:00 2001
From: John Blischak <jdblischak@gmail.com>
Date: Fri, 24 Jan 2025 12:52:47 -0500
Subject: [PATCH 1/3] `usethis::use_github_action("test-coverage")`

---
 .github/workflows/test-coverage.yaml | 21 ++++++++++++++++-----
 README.md                            |  2 +-
 2 files changed, 17 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
index 960234cd..e050312f 100644
--- a/.github/workflows/test-coverage.yaml
+++ b/.github/workflows/test-coverage.yaml
@@ -4,9 +4,10 @@ on:
   push:
     branches: [main, master]
   pull_request:
-    branches: [main, master]
 
-name: test-coverage
+name: test-coverage.yaml
+
+permissions: read-all
 
 jobs:
   test-coverage:
@@ -23,23 +24,33 @@ jobs:
 
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
-          extra-packages: any::covr
+          extra-packages: any::covr, any::xml2
           needs: coverage
 
       - name: Test coverage
         run: |
-          covr::codecov(
+          cov <- covr::package_coverage(
             quiet = FALSE,
             clean = FALSE,
             install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
           )
+          covr::to_cobertura(cov)
         shell: Rscript {0}
 
+      - uses: codecov/codecov-action@v4
+        with:
+          # Fail if error if not on PR, or if on PR and token is given
+          fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }}
+          file: ./cobertura.xml
+          plugin: noop
+          disable_search: true
+          token: ${{ secrets.CODECOV_TOKEN }}
+
       - name: Show testthat output
         if: always()
         run: |
           ## --------------------------------------------------------------------
-          find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
+          find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
         shell: bash
 
       - name: Upload test results
diff --git a/README.md b/README.md
index 6f719487..89638179 100644
--- a/README.md
+++ b/README.md
@@ -2,7 +2,7 @@
 
 <!-- badges: start -->
 [![CRAN status](https://www.r-pkg.org/badges/version/gsDesign)](https://CRAN.R-project.org/package=gsDesign)
-[![Codecov test coverage](https://codecov.io/gh/keaven/gsDesign/branch/master/graph/badge.svg)](https://app.codecov.io/gh/keaven/gsDesign?branch=master)
+[![Codecov test coverage](https://codecov.io/gh/keaven/gsDesign/graph/badge.svg)](https://app.codecov.io/gh/keaven/gsDesign)
 [![pkgdown](https://github.com/keaven/gsDesign/actions/workflows/pkgdown.yaml/badge.svg)](https://github.com/keaven/gsDesign/actions/workflows/pkgdown.yaml)
 [![R-CMD-check](https://github.com/keaven/gsDesign/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/keaven/gsDesign/actions/workflows/R-CMD-check.yaml)
 [![shinyapps.io](https://img.shields.io/badge/Shiny-shinyapps.io-blue)](https://rinpharma.shinyapps.io/gsdesign/)

From d1647a1eccef211fdd5b647df30d4de4c0108950 Mon Sep 17 00:00:00 2001
From: John Blischak <jdblischak@gmail.com>
Date: Fri, 24 Jan 2025 12:54:41 -0500
Subject: [PATCH 2/3] Do not upload coverage results to Codecov when run in a
 fork

---
 .github/workflows/test-coverage.yaml | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
index e050312f..de25f1b2 100644
--- a/.github/workflows/test-coverage.yaml
+++ b/.github/workflows/test-coverage.yaml
@@ -4,6 +4,7 @@ on:
   push:
     branches: [main, master]
   pull_request:
+  workflow_dispatch:
 
 name: test-coverage.yaml
 
@@ -38,6 +39,7 @@ jobs:
         shell: Rscript {0}
 
       - uses: codecov/codecov-action@v4
+        if: github.event.repository.fork == false
         with:
           # Fail if error if not on PR, or if on PR and token is given
           fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }}

From e5049c343584950c5f90f6ec4abec8399399fff6 Mon Sep 17 00:00:00 2001
From: John Blischak <jdblischak@gmail.com>
Date: Fri, 24 Jan 2025 14:28:48 -0500
Subject: [PATCH 3/3] Run coverage workflow and upload results to Codecov on
 any branch

---
 .github/workflows/test-coverage.yaml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
index de25f1b2..50b4a507 100644
--- a/.github/workflows/test-coverage.yaml
+++ b/.github/workflows/test-coverage.yaml
@@ -2,7 +2,6 @@
 # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 on:
   push:
-    branches: [main, master]
   pull_request:
   workflow_dispatch: