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Afdaq.m
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Afdaq.m
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function varargout = AfDaq(varargin)
% AFDAQ MATLAB code for AfDaq.fig
% AFDAQ, by itself, creates a new AFDAQ or raises the existing
% singleton*.
%
% H = AFDAQ returns the handle to a new AFDAQ or the handle to
% the existing singleton*.
%
% AFDAQ('CALLBACK',hObject,eventData,handles,...) calls the local
% function named CALLBACK in AFDAQ.M with the given input arguments.
%
% AFDAQ('Property','Value',...) creates a new AFDAQ or raises the
% existing singleton*. Starting from the left, property value pairs are
% applied to the GUI before AfDaq_OpeningFcn gets called. An
% unrecognized property name or invalid value makes property application
% stop. All inputs are passed to AfDaq_OpeningFcn via varargin.
%
% *See GUI Options on GUIDE's Tools menu. Choose "GUI allows only one
% instance to run (singleton)".
%
% See also: GUIDE, GUIDATA, GUIHANDLES
% Edit the above text to modify the response to help AfDaq
% Last Modified by GUIDE v2.5 05-Jul-2020 16:24:49
% Begin initialization code - DO NOT EDIT
gui_Singleton = 1;
gui_State = struct('gui_Name', mfilename, ...
'gui_Singleton', gui_Singleton, ...
'gui_OpeningFcn', @AfDaq_OpeningFcn, ...
'gui_OutputFcn', @AfDaq_OutputFcn, ...
'gui_LayoutFcn', [] , ...
'gui_Callback', []);
if nargin && ischar(varargin{1})
gui_State.gui_Callback = str2func(varargin{1});
end
if nargout
[varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:});
else
gui_mainfcn(gui_State, varargin{:});
end
% End initialization code - DO NOT EDIT
% --- Executes just before AfDaq is made visible.
function AfDaq_OpeningFcn(hObject, eventdata, handles, varargin)
% This function has no output args, see OutputFcn.
% hObject handle to figure
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% varargin command line arguments to AfDaq (see VARARGIN)
% Choose default command line output for AfDaq
handles.output = hObject;
guidata(hObject, handles);
evalin('base','clear');
clc
format;
%set(handles.figure1,'Position', [0.1 0.1 0.7 0.7]);
%set(findall(handles.figure1,'-property','FontUnits'),'FontUnits','normalized');
DefaultSettings(handles);
InitializeVariables(handles);
InitializeGui(eventdata,handles);
Arduino(handles,'initialize');
disp('Session Started...');
% UIWAIT makes AfDaq wait for user response (see UIRESUME)
% uiwait(handles.figure1);
% --- Outputs from this function are returned to the command line.
function varargout = AfDaq_OutputFcn(hObject, eventdata, handles)
% varargout cell array for returning output args (see VARARGOUT);
% hObject handle to figure
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Get default command line output from handles structure
varargout{1} = handles.output;
% --- Executes on button press in togglebutton_action.
function togglebutton_action_Callback(hObject, eventdata, handles)
% hObject handle to togglebutton_action (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hint: get(hObject,'Value') returns toggle state of togglebutton_action
% try
% u = udp('127.0.0.1',8000);
% fopen(u);
actionButtonState = get(hObject,'Value');
if actionButtonState == get(hObject,'Max')
InitializeVariables(handles);
ard = getappdata(handles.figure1,'settings_ard');
% profile on
% initializing some of the variables to be used in the loop
timeInterval = getappdata(handles.figure1,'settings_samplingTimeInterval');
sessionDuration = getappdata(handles.figure1,'settings_sessionDuration');
numberOfSamples = getappdata(handles.figure1,'settings_numberOfSamples');
rawDataChannel1Sample = NaN;
rawDataChannel2Sample = NaN;
rawDataChannel3Sample = NaN;
rawDataChannel4Sample = NaN;
rawDataChannel5Sample = NaN;
scaledDataChannel1Sample = NaN;
isDataScaling = getappdata(handles.figure1,'flags_isDataScaling');
if(isDataScaling)
scalingFunction = getappdata(handles.figure1,'settings_scalingFunction');
scalingFunction = strrep(scalingFunction,'X','rawDataChannel1Sample');
scalingFunction = char(scalingFunction);
end
scrollPlotWidth = getappdata(handles.figure1,'setting_scrollPlotWidth');
rightOffset = getappdata(handles.figure1,'settings_rightOffset');
count = 0;
isChannel1Running = getappdata(handles.figure1,'flags_isChannel1Running');
isChannel2Running = getappdata(handles.figure1,'flags_isChannel2Running');
isChannel3Running = getappdata(handles.figure1,'flags_isChannel3Running');
isChannel4Running = getappdata(handles.figure1,'flags_isChannel4Running');
isChannel5Running = getappdata(handles.figure1,'flags_isChannel5Running');
channel1Type = getappdata(handles.figure1,'settings_channel1Type');
channel1Pin = getappdata(handles.figure1,'settings_channel1Pin');
channel2Type = getappdata(handles.figure1,'settings_channel2Type');
channel2Pin = getappdata(handles.figure1,'settings_channel2Pin');
channel3Type = getappdata(handles.figure1,'settings_channel3Type');
channel3Pin = getappdata(handles.figure1,'settings_channel3Pin');
channel4Type = getappdata(handles.figure1,'settings_channel4Type');
channel4Pin = getappdata(handles.figure1,'settings_channel4Pin');
channel5Type = getappdata(handles.figure1,'settings_channel5Type');
channel5Pin = getappdata(handles.figure1,'settings_channel5Pin');
numberOfActiveChannels = NumberOfActiveChannels(handles);
setappdata(handles.figure1,'settings_numberOfChannels',numberOfActiveChannels);
cla(handles.axes1);
dcBias = 0;
if(isChannel1Running)
if(strcmp(channel1Type,'AnalogInput'))
configurePin(ard,channel1Pin,channel1Type);
elseif(strcmp(channel1Type,'DigitalInput'))
configurePin(ard,channel1Pin,channel1Type);
configurePin(ard,channel1Pin,'pullup');
dcBiasChannel1 = dcBias;
dcBias = dcBias + 200;
end
animatedlineHandle1 = animatedline(handles.axes1,'LineWidth',1.5,'Color',[0 0.4470 0.7410]);
end
if(isDataScaling)
animatedlineHandle1_s = animatedline(handles.axes1,'LineWidth',1.5,'Color',[0 0 0]);
end
if(isChannel2Running)
if(strcmp(channel2Type,'AnalogInput'))
configurePin(ard,channel2Pin,channel2Type);
elseif(strcmp(channel2Type,'DigitalInput'))
configurePin(ard,channel2Pin,channel2Type);
configurePin(ard,channel2Pin,'pullup');
dcBiasChannel2 = dcBias;
dcBias = dcBias + 200;
end
animatedlineHandle2 = animatedline(handles.axes1,'LineWidth',1.5,'Color',[0.8500 0.3250 0.0980]);
end
if(isChannel3Running)
if(strcmp(channel3Type,'AnalogInput'))
configurePin(ard,channel3Pin,channel3Type);
elseif(strcmp(channel3Type,'DigitalInput'))
configurePin(ard,channel3Pin,channel3Type);
configurePin(ard,channel3Pin,'pullup');
dcBiasChannel3 = dcBias;
dcBias = dcBias + 200;
end
animatedlineHandle3 = animatedline(handles.axes1,'LineWidth',1.5,'Color',[0.9290 0.6940 0.1250]);
end
if(isChannel4Running)
if(strcmp(channel4Type,'AnalogInput'))
configurePin(ard,channel4Pin,channel4Type);
elseif(strcmp(channel4Type,'DigitalInput'))
configurePin(ard,channel4Pin,channel4Type);
configurePin(ard,channel4Pin,'pullup');
dcBiasChannel4 = dcBias;
dcBias = dcBias + 200;
end
animatedlineHandle4 = animatedline(handles.axes1,'LineWidth',1.5,'Color',[0.4940 0.1840 0.5560]);
end
if(isChannel5Running)
if(strcmp(channel5Type,'AnalogInput'))
configurePin(ard,channel5Pin,channel5Type);
elseif(strcmp(channel5Type,'DigitalInput'))
configurePin(ard,channel5Pin,channel5Type);
configurePin(ard,channel5Pin,'pullup');
dcBiasChannel5 = dcBias;
end
animatedlineHandle5 = animatedline(handles.axes1,'LineWidth',1.5,'Color',[0.4660 0.6740 0.1880]);
end
% animatedlineHandle6 = animatedline(handles.axes1,'LineWidth',1.5,'Color',[0 0 0]);
AcqRunningGuiFormat(handles);
timeIntervalUs = timeInterval * 10^6;
timeJitterUs = 0;
% timer_buttonUpdate = tic;
tic;
timeSample = toc*10^6;
% TJ_Work = NaN(1,numberOfSamples);
% TJ_Pause = NaN(1,numberOfSamples);
% profile on
while(actionButtonState && (toc <= sessionDuration) )
% if(count > 0)
% tPause = tic; % benchmark
% end
while( ((toc*10^6) - timeSample) < (timeIntervalUs - timeJitterUs) )
% disp('wasting time')
% drawnow limitrate
pause(0);
end
% if(count > 0)
% TJ_Pause(count) = toc(tPause)*1000;
% end
% tWork = tic; % benchmark
count = count + 1;
timeSample = toc*10^6;
if(isChannel1Running)
if(strcmp(channel1Type,'AnalogInput'))
rawDataChannel1Sample = readVoltage(ard, channel1Pin) * (1023/5);
elseif(strcmp(channel1Type,'DigitalInput'))
rawDataChannel1Sample = (1 - readDigitalPin(ard,channel1Pin)) * (150) + dcBiasChannel1;
end
end
if(isChannel2Running)
if(strcmp(channel2Type,'AnalogInput'))
rawDataChannel2Sample = readVoltage(ard, channel2Pin) * (1023/5);
elseif(strcmp(channel2Type,'DigitalInput'))
rawDataChannel2Sample = (1 - readDigitalPin(ard,channel2Pin)) * (150) + dcBiasChannel2;
end
end
if(isChannel3Running)
if(strcmp(channel3Type,'AnalogInput'))
rawDataChannel3Sample = readVoltage(ard, channel3Pin) * (1023/5);
elseif(strcmp(channel3Type,'DigitalInput'))
rawDataChannel3Sample = (1 - readDigitalPin(ard,channel3Pin)) * (150) + dcBiasChannel3;
end
end
if(isChannel4Running)
if(strcmp(channel4Type,'AnalogInput'))
rawDataChannel4Sample = readVoltage(ard, channel4Pin) * (1023/5);
elseif(strcmp(channel4Type,'DigitalInput'))
rawDataChannel4Sample = (1 - readDigitalPin(ard,channel4Pin)) * (150) + dcBiasChannel4;
end
end
if(isChannel5Running)
if(strcmp(channel5Type,'AnalogInput'))
rawDataChannel5Sample = readVoltage(ard, channel5Pin) * (1023/5);
elseif(strcmp(channel5Type,'DigitalInput'))
rawDataChannel5Sample = (1 - readDigitalPin(ard,channel5Pin)) * (150) + dcBiasChannel5;
end
end
timeSampleSec = timeSample/(10^6);
% Calculating scaled data sample
if(isDataScaling)
scaledDataChannel1Sample = eval(scalingFunction);
end
isYAxisAutoScale = getappdata(handles.figure1,'flags_isYAxisAutoScale');
yMinValue = getappdata(handles.figure1,'settings_yMinValue');
yMaxValue = getappdata(handles.figure1,'settings_yMaxValue');
% setting plot axes property
if(timeSampleSec > scrollPlotWidth)
xMin = timeSampleSec-scrollPlotWidth;
xMax = timeSampleSec+rightOffset;
else
% timeSampleSec <= scrollPlotWidth
xMin = 0;
xMax = scrollPlotWidth+rightOffset;
end
if(count == 1)
yData = [rawDataChannel1Sample rawDataChannel2Sample rawDataChannel3Sample rawDataChannel5Sample scaledDataChannel1Sample];
yMaxTh = max(yData) + 1;
yMinTh = min(yData);
end
if(isYAxisAutoScale)
yData = [rawDataChannel1Sample rawDataChannel2Sample rawDataChannel3Sample rawDataChannel5Sample scaledDataChannel1Sample];
yMinData = min(yData);
yMaxData = max(yData);
if(yMinData < yMinTh)
yMinTh = yMinData;
end
if(yMaxData > yMaxTh)
yMaxTh = yMaxData;
end
yMin = yMinTh;
yMax = yMaxTh;
else
yMin = yMinValue;
yMax = yMaxValue;
end
yMaxOffset = yMax + (0.01*yMax);
yMinOffset = yMin - (0.01*yMin);
set(handles.axes1,'xlim',[xMin xMax],'ylim',[yMinOffset yMaxOffset]);
% Plotting data
if(isChannel1Running)
addpoints(animatedlineHandle1, timeSampleSec,rawDataChannel1Sample);
end
if(isDataScaling)
addpoints(animatedlineHandle1_s, timeSampleSec,scaledDataChannel1Sample);
end
if(isChannel2Running)
addpoints(animatedlineHandle2, timeSampleSec,rawDataChannel2Sample);
end
if(isChannel3Running)
addpoints(animatedlineHandle3, timeSampleSec,rawDataChannel3Sample);
end
if(isChannel4Running)
addpoints(animatedlineHandle4, timeSampleSec,rawDataChannel4Sample);
end
if(isChannel5Running)
addpoints(animatedlineHandle5, timeSampleSec,rawDataChannel5Sample);
end
% oscsend(u,'/oscValue','i',rawDataChannel1(count));
% time_buttonUpdate = toc(timer_buttonUpdate); % check timer
% if time_buttonUpdate > (1)
actionButtonState = get(hObject,'Value');
drawnow limitrate
% drawnow limitrate
% timer_buttonUpdate = tic; % reset timer after updating
% end
timeJitterUs = timeSample - (timeIntervalUs*(count));
% TJ_Work(count) = toc(tWork)*1000;
end
% profile viewer
% Saving data in the application data handle
recordedNumberOfSamples = count;
% assignin('base','data_sampleNumber',sampleNumber);
sampleNumber = 1:1:recordedNumberOfSamples;
[timeStampsMsec, ~] = getpoints(animatedlineHandle1);
timeStampsMsec = round(timeStampsMsec*1000,0);
setappdata(handles.figure1,'data_sampleNumber',sampleNumber);
setappdata(handles.figure1,'data_timeStampsMsec',timeStampsMsec);
setappdata(handles.figure1,'data_recordedNumberOfSamples',recordedNumberOfSamples);
dcBias = 0;
if(isChannel1Running)
% rawDataChannel1 = rawDataChannel1(1:recordedNumberOfSamples);
[~ ,rawDataChannel1] = getpoints(animatedlineHandle1);
if(strcmp(channel1Type,'DigitalInput'))
dcBiasChannel1 = dcBias;
dcBias = dcBias + 200;
rawDataChannel1 = (rawDataChannel1 - dcBiasChannel1)/150;
end
setappdata(handles.figure1,'data_rawDataChannel1',rawDataChannel1);
end
if(isChannel2Running)
% rawDataChannel2 = rawDataChannel2(1:recordedNumberOfSamples);
[~ ,rawDataChannel2] = getpoints(animatedlineHandle2);
if(strcmp(channel2Type,'DigitalInput'))
dcBiasChannel2 = dcBias;
dcBias = dcBias + 200;
rawDataChannel2 = (rawDataChannel2 - dcBiasChannel2)/150;
end
setappdata(handles.figure1,'data_rawDataChannel2',rawDataChannel2);
end
if(isChannel3Running)
% rawDataChannel3 = rawDataChannel3(1:recordedNumberOfSamples);
[~ ,rawDataChannel3] = getpoints(animatedlineHandle3);
if(strcmp(channel3Type,'DigitalInput'))
dcBiasChannel3 = dcBias;
dcBias = dcBias + 200;
rawDataChannel3 = (rawDataChannel3 - dcBiasChannel3)/150;
end
setappdata(handles.figure1,'data_rawDataChannel3',rawDataChannel3);
end
if(isChannel4Running)
% rawDataChannel4 = rawDataChannel4(1:recordedNumberOfSamples);
[~ ,rawDataChannel4] = getpoints(animatedlineHandle4);
if(strcmp(channel4Type,'DigitalInput'))
dcBiasChannel4 = dcBias;
dcBias = dcBias + 200;
rawDataChannel4 = (rawDataChannel4 - dcBiasChannel4)/150;
end
setappdata(handles.figure1,'data_rawDataChannel4',rawDataChannel4);
end
if(isChannel5Running)
% rawDataChannel5 = rawDataChannel5(1:recordedNumberOfSamples);
[~ ,rawDataChannel5] = getpoints(animatedlineHandle5);
if(strcmp(channel5Type,'DigitalInput'))
dcBiasChannel5 = dcBias;
rawDataChannel5 = (rawDataChannel5 - dcBiasChannel5)/150;
end
setappdata(handles.figure1,'data_rawDataChannel5',rawDataChannel5);
end
if(isDataScaling)
scalingFx = getappdata(handles.figure1,'settings_scalingFunction');
scalingFx = strrep(scalingFx,'X','rawDataChannel1');
scalingFx= char(scalingFx);
scaledDataChannel1 = eval(scalingFx);
setappdata(handles.figure1,'data_scaledDataChannel1',scaledDataChannel1);
end
% [~ ,time_a] = getpoints(animatedlineHandle6);
% figure()
% plot(time_a)
% assignin('base','data_timeStampsMsec',timeStampsMsec);
%
% clc
% TJ_Work = TJ_Work(1:count);
% TJ_Pause = TJ_Pause(1:count);
% assignin('base','TJ_Work',TJ_Work);
% assignin('base','TJ_Pause',TJ_Pause);
% figure()
% hold on
% plot(TJ_Work,'Color', [1 0 0])
% plot(TJ_Pause,'Color', [0 0 1])
% plot(TJ_Work + TJ_Pause,'Color', [0 0 0])
%
% T_M = table(TJ_Work', TJ_Pause', (TJ_Work+TJ_Pause)', 'VariableNames',{'Work','Pause','Sum'})
% mean(TJ_ben)
% median(TJ_ben)
% mode(TJ_ben)
% figure()
% plot(TJ_ben)
% figure()
% histogram(TJ_ben,count)
% figure()
% boxplot(TJ_ben)
% assignin('base','data_rawDataChannel1',rawDataChannel1);
% assignin('base','data_rawDataChannel2',rawDataChannel2);
AcqStoppedGuiFormat(handles);
CalculateResults(handles)
%profile viewer
end
% catch ME
% disp(ME.identifier)
% disp(ME)
% disp('catch activated')
%
% string = '!!!...ERROR...!!!';
% color = [0.964, 0.243, 0.192];
% set(handles.text_statusMsg, 'String', string);
% set(handles.text_statusMsg, 'ForegroundColor', color);
% switch ME.identifier
% case {'MATLAB:arduinoio:general:invalidAddressType', 'MATLAB:arduinoio:general:invalidAddressPCMac' , 'MATLAB:arduinoio:general:invalidPort'}
% disp(ME.identifier)
%
% otherwise
% disp(ME.identifier)
% disp('Unknown error !!!');
% end
% end
% --- Executes on button press in pushbutton_exit.
function pushbutton_exit_Callback(hObject, eventdata, handles)
% hObject handle to pushbutton_exit (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
%global ard rightOffset scrollWidth data;
%fclose(serial(ard.Port)); %Create a serial object with the port Arduino is connected to it and close it
%clear ard; %Remove the variable
clear global;
close all;
%clc;
%delete(instrfind);
disp('Session Terminated...');
function edit_samplingFrequency_Callback(hObject, eventdata, handles)
% hObject handle to edit_samplingFrequency (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit_samplingFrequency as text
% str2double(get(hObject,'String')) returns contents of edit_samplingFrequency as a double
samplingFrequency = str2double(get(handles.edit_samplingFrequency,'String'));
if(samplingFrequency<=0)
set(handles.edit_samplingFrequency,'String',num2str(1));
elseif(samplingFrequency>50)
set(handles.edit_samplingFrequency,'String',num2str(50));
end
% --- Executes during object creation, after setting all properties.
function edit_samplingFrequency_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit_samplingFrequency (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
% --- Executes on button press in pushbutton_log.
function pushbutton_log_Callback(hObject, eventdata, handles)
% hObject handle to pushbutton_log (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
string = 'Data Logging - in process...';
color = [0.94 0 0];
set(handles.text_statusMsg, 'String', string);
set(handles.text_statusMsg, 'ForegroundColor', color);
drawnow
serialPort = getappdata(handles.figure1,'settings_serialPort');
ardBoard = getappdata(handles.figure1,'settings_ardBoard');
customId = getappdata(handles.figure1,'settings_customId');
sessionId = getappdata(handles.figure1,'settings_sessionId');
sessionDate = getappdata(handles.figure1,'settings_sessionDate');
sessionTime = getappdata(handles.figure1,'settings_sessionTime');
sessionDuration = getappdata(handles.figure1,'settings_sessionDuration');
samplingFrequency = getappdata(handles.figure1,'settings_samplingFrequency');
samplingTimeInterval = round(getappdata(handles.figure1,'settings_samplingTimeInterval')*1000,0);
numberOfSamples = getappdata(handles.figure1,'settings_numberOfSamples');
scrollPlotWidth = getappdata(handles.figure1,'setting_scrollPlotWidth');
isDataScaling = getappdata(handles.figure1,'flags_isDataScaling');
if(isDataScaling)
scalingFunction = getappdata(handles.figure1,'settings_scalingFunction');
else
scalingFunction = 'Off';
end
numberOfChannels = getappdata(handles.figure1,'settings_numberOfChannels');
contents = cellstr(get(handles.popupmenu_channel1,'String'));
channel1 = contents{get(handles.popupmenu_channel1,'Value')};
contents = cellstr(get(handles.popupmenu_channel2,'String'));
channel2 = contents{get(handles.popupmenu_channel2,'Value')};
contents = cellstr(get(handles.popupmenu_channel3,'String'));
channel3 = contents{get(handles.popupmenu_channel3,'Value')};
contents = cellstr(get(handles.popupmenu_channel4,'String'));
channel4 = contents{get(handles.popupmenu_channel4,'Value')};
contents = cellstr(get(handles.popupmenu_channel5,'String'));
channel5 = contents{get(handles.popupmenu_channel5,'Value')};
DAQ_Settings = { serialPort,...
ardBoard,...
customId,...
sessionId,...
sessionDate,...
sessionTime,...
sessionDuration,...
samplingFrequency,...
samplingTimeInterval,...
numberOfSamples,...
scrollPlotWidth,...
scalingFunction,...
numberOfChannels,...
channel1,...
channel2,...
channel3,...
channel4,...
channel5};
recordedSessionDuration = round(getappdata(handles.figure1,'data_recordedSessionDuration'),2);
recordedSamplingFrequency = round(getappdata(handles.figure1,'data_recordedSamplingFrequency'),2);
recordedNumberOfSamples = getappdata(handles.figure1,'data_recordedNumberOfSamples');
sessionRecordingPercentage = round((recordedSessionDuration/sessionDuration)*100,2);
DAQ_Results = { recordedSessionDuration,...
recordedSamplingFrequency,...
recordedNumberOfSamples,...
sessionRecordingPercentage};
sampleNumber = getappdata(handles.figure1,'data_sampleNumber');
timeStampsMsec = getappdata(handles.figure1,'data_timeStampsMsec');
rawDataChannel1 = getappdata(handles.figure1,'data_rawDataChannel1');
rawDataChannel2 = getappdata(handles.figure1,'data_rawDataChannel2');
rawDataChannel3 = getappdata(handles.figure1,'data_rawDataChannel3');
rawDataChannel4 = getappdata(handles.figure1,'data_rawDataChannel4');
rawDataChannel5 = getappdata(handles.figure1,'data_rawDataChannel5');
scaledDataChannel1 = getappdata(handles.figure1,'data_scaledDataChannel1');
data = [sampleNumber' timeStampsMsec' rawDataChannel1' rawDataChannel2' rawDataChannel3' rawDataChannel4' rawDataChannel5'];
%dataCell = num2cell(data);
%dataCell(isnan(data)) ={'NaN'};
% B = num2cell(A);
% B(isnan(A)) ={'NaN'};
% if(exist('daq_1_channel_data.xlsx', 'file'))
%
% t = xlsread('daq_1_channel_data.xlsx');
% if ~isempty(t)
% xlswrite('daq_1_channel_data.xlsx',zeros(size(t))*nan);
% end
% end
%
% col_header(1,3) = {'Arduino Serial Data Acquisition'};
% col_header([3:21],1)={'DAQ Settings',...
% 'Serial Port of Arduino',...
% 'Arduino Model'...
% 'Custom ID'...
% 'Session ID'...
% 'Session Date'...
% 'Session Time'...
% 'Session Duration (sec)'...
% 'Sampling Frequency (Hz)'...
% 'Sampling Time Interval (msec)'...
% 'Number of Samples to be Recorded'...
% 'Scroll Plot Width (sec)'...
% 'Scaling Function',...
% 'Number of Channels',...
% 'Channel 1',...
% 'Channel 2',...
% 'Channel 3',...
% 'Channel 4',...
% 'Channel 5'};
%
% col_header([3:7],4)={'DAQ Results',...
% 'Recorded Session Duration (sec)',...
% 'Recorded Sampling Frequency (Hz)'...
% 'Recorded Number of Samples'...
% 'Session recording %age'};
% col_header(23,[1:8]) = {'Sample Number','Time Stamps (msec)','Raw Sensor Data - Channel 1','Raw Sensor Data - Channel 2','Raw Sensor Data - Channel 3','Raw Sensor Data - Channel 4','Raw Sensor Data - Channel 5','Scaled Sensor Data'};
[status, msg, msgID] = mkdir('LoggedData');
defname = num2str(sessionId);
FileName = strcat(defname, '.xlsx');
PathName = strcat(pwd, '\LoggedData\');
copyfile('LogDataTemplate.xlsx',strcat('LoggedData/', defname, '.xlsx'));
xlswrite([PathName FileName],DAQ_Settings','Sheet1','B4'); %Write data
xlswrite([PathName FileName],DAQ_Results','Sheet1','B24'); %Write data
xlswrite([PathName FileName],data,'Sheet1','D4'); %Write data
if(isDataScaling)
xlswrite([PathName FileName],scaledDataChannel1','Sheet1','K4'); %Write data
end
%
% [FileName, PathName] = uiputfile({'*.xlsx';'*.xls'},'Log Data to File...',[defname '.xlsx'])
%
% if FileName ~=0
% if exist([PathName FileName],'file')
% delete([PathName FileName ]);
% end
%
% xlswrite([PathName FileName],col_header,'Sheet1','A1');
% xlswrite([PathName FileName],DAQ_Settings','Sheet1','B4'); %Write data
% xlswrite([PathName FileName],DAQ_Results','Sheet1','E4'); %Write data
% xlswrite([PathName FileName],data,'Sheet1','A24'); %Write data
% xlsAutoFitCol([PathName FileName],'Sheet1','A:I');
% xlsfont([PathName FileName],'Sheet1','whole','font','Calibri','size',11);
% xlsalign([PathName FileName],'Sheet1','C1:E1','MergeCells',1);
% xlsborder([PathName FileName],'Sheet1','C1','Box',1,3,1);
% xlsfont([PathName FileName],'Sheet1','C1:E1','size',20,'fontstyle','bold');
% xlsfont([PathName FileName],'Sheet1','A3:D3','size',11,'fontstyle','bold');
% xlsfont([PathName FileName],'Sheet1','A23:I23','size',11,'fontstyle','bold');
% xlsalign([PathName FileName],'Sheet1','B4:B21','Horizontal',4);
% xlsalign([PathName FileName],'Sheet1','E4:E7','Horizontal',4);
%
%xlswrite('daq_1_channel_data.xlsx',col_header,'Sheet1','A1'); %Write column header
%xlswrite('daq_1_channel_data.xlsx',row_header,'Sheet1','A2'); %Write row header
string = 'Data Logging - Completed';
color = [0 0.38 0.11];
set(handles.text_statusMsg, 'String', string);
set(handles.text_statusMsg, 'ForegroundColor', color);
% else
%
% string = 'Data Logging - Cancelled';
% color = [0 0.38 0.11];
% set(handles.text_statusMsg, 'String', string);
% set(handles.text_statusMsg, 'ForegroundColor', color);
%
% end
drawnow
function edit_sessionDuration_Callback(hObject, eventdata, handles)
% hObject handle to edit_sessionDuration (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit_sessionDuration as text
% str2double(get(hObject,'String')) returns contents of edit_sessionDuration as a double
sessionDuration = str2double(get(handles.edit_sessionDuration,'String'));
if(sessionDuration<=0)
set(handles.edit_sessionDuration,'String',num2str(1));
end
% --- Executes during object creation, after setting all properties.
function edit_sessionDuration_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit_sessionDuration (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
% --- Executes on button press in pushbutton_snapshot.
function pushbutton_snapshot_Callback(hObject, eventdata, handles)
% hObject handle to pushbutton_snapshot (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% F = getframe(handles.output);
% Image = frame2im(F);
% imwrite(Image, 'daq_1_channel_data.png');
% GUI_fig_children=get(gcf,'children');
% Fig_Axes=findobj(GUI_fig_children,'type','Axes');
% fig=figure;ax=axes;clf;
% new_handle=copyobj(Fig_Axes,fig);
% set(gca,'ActivePositionProperty','outerposition')
% set(gca,'Units','normalized')
% set(gca,'OuterPosition',[0 0 1 1])
% set(gca,'position',[0.1300 0.1100 0.7750 0.8150])
%hgexport(handles.output,'-clipboard')
set(handles.output, 'PaperPositionMode', 'auto');
set(handles.output,'InvertHardcopy','off');
print -dmeta %-pdf
% Displaying status message
string = 'Snapshot copied to clipboard...';
color = [0 0.38 0.11];
set(handles.text_statusMsg, 'String', string);
set(handles.text_statusMsg, 'ForegroundColor', color);
function edit_customId_Callback(hObject, eventdata, handles)
% hObject handle to edit_customId (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit_customId as text
% str2double(get(hObject,'String')) returns contents of edit_customId as a double
customId = get(handles.edit_customId,'String');
setappdata(handles.figure1,'settings_customId',customId);
% --- Executes during object creation, after setting all properties.
function edit_customId_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit_customId (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
function edit_scrollPlotWidth_Callback(hObject, eventdata, handles)
% hObject handle to edit_scrollPlotWidth (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit_scrollPlotWidth as text
% str2double(get(hObject,'String')) returns contents of edit_scrollPlotWidth as a double
scrollPlotWidth = str2double(get(handles.edit_scrollPlotWidth,'String'));
if(scrollPlotWidth<=0)
set(handles.edit_sessionDuration,'String',num2str(1));
end
% --- Executes during object creation, after setting all properties.
function edit_scrollPlotWidth_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit_scrollPlotWidth (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
% --- Executes on button press in pushbutton_debug.
function pushbutton_debug_Callback(hObject, eventdata, handles)
% hObject handle to pushbutton_debug (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Displaying status message
string = 'Debug called...!!!';
color = [0.607, 0.207, 0.050];
set(handles.text_statusMsg, 'String', string);
set(handles.text_statusMsg, 'ForegroundColor', color);
%disp('Debug called')
setappdata(handles.figure1,'flags_isBenchmarkRunning',true);
set(handles.togglebutton_action,'Value',1);
togglebutton_action_Callback(handles.togglebutton_action, eventdata,handles);
set(handles.edit_samplingFrequency,'String',num2str(20));
setappdata(handles.figure1,'flags_isBenchmarkRunning',true);
set(handles.togglebutton_action,'Value',1);
togglebutton_action_Callback(handles.togglebutton_action, eventdata,handles);
% hObj = get(findall(handles.figure1,'-property','FontUnits'),'FontUnits','normalized');
%
% callbackCell = get(hObject,'Callback');
%
% callbackCell{1}(hObject,[],callbackCell{2:end});
%callbackA = get(gcf, 'ButtonDownFcn');
%hgfeval(callbackA);
% --- Executes on selection change in listbox_serialPorts.
function listbox_serialPorts_Callback(hObject, eventdata, handles)
% hObject handle to listbox_serialPorts (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: contents = cellstr(get(hObject,'String')) returns listbox_serialPorts contents as cell array
% contents{get(hObject,'Value')} returns selected item from listbox_serialPorts
listContents = cellstr(get(hObject,'String'));
portSelected = listContents{get(hObject,'Value')};
setappdata(handles.figure1,'settings_serialPort',portSelected);
% --- Executes during object creation, after setting all properties.
function listbox_serialPorts_CreateFcn(hObject, eventdata, handles)
% hObject handle to listbox_serialPorts (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: listbox controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
% --- Executes on button press in pushbutton_connect.
function pushbutton_connect_Callback(hObject, eventdata, handles)
% hObject handle to pushbutton_connect (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Displaying status message.
string = 'Establishing connection to Arduino. Wait....';
color = [0 0.38 0.11];
set(handles.text_statusMsg, 'String', string);
set(handles.text_statusMsg, 'ForegroundColor', color);
drawnow
Arduino(handles,'connect');
% --- Executes on button press in pushbutton_help.
function pushbutton_help_Callback(hObject, eventdata, handles)
% hObject handle to pushbutton_help (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
Help
%
% filter = {'*.xlsx';'*.xls';'*.*'};
% [file, path] = uiputfile(filter,'test.xlsx');
%
% if isequal(file,0) || isequal(path,0)
% disp('User clicked Cancel.')
% else
% disp(['User selected ',fullfile(path,file),...
% ' and then clicked Save.'])
% end
% --- Executes on button press in pushbutton_reset.
function pushbutton_reset_Callback(hObject, eventdata, handles)
% hObject handle to pushbutton_reset (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
evalin('base','clear');
clc
DefaultSettings(handles);
InitializeVariables(handles);
InitializeGui(eventdata,handles);
Arduino(handles,'initialize');
% Displaying status message
string = 'GUI reseted and Initialized...!!!';
color = [0 0.38 0.11];
set(handles.text_statusMsg, 'String', string);
set(handles.text_statusMsg, 'ForegroundColor', color);
function edit_debug_Callback(hObject, eventdata, handles)
% hObject handle to edit_debug (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Hints: get(hObject,'String') returns contents of edit_debug as text
% str2double(get(hObject,'String')) returns contents of edit_debug as a double
% --- Executes during object creation, after setting all properties.
function edit_debug_CreateFcn(hObject, eventdata, handles)
% hObject handle to edit_debug (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles empty - handles not created until after all CreateFcns called
% Hint: edit controls usually have a white background on Windows.
% See ISPC and COMPUTER.
if ispc && isequal(get(hObject,'BackgroundColor'), get(0,'defaultUicontrolBackgroundColor'))
set(hObject,'BackgroundColor','white');
end
function edit_scalingFunction_Callback(hObject, eventdata, handles)
% hObject handle to edit_scalingFunction (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB