From d4df6f3d8301f4251d4cf322fc963d6334253156 Mon Sep 17 00:00:00 2001
From: Tahir D'Mello <tahirdme@gmail.com>
Date: Sat, 14 Sep 2024 12:36:20 -0700
Subject: [PATCH] final launch

---
 wf/__init__.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/wf/__init__.py b/wf/__init__.py
index 8d16fc28..5f16b916 100644
--- a/wf/__init__.py
+++ b/wf/__init__.py
@@ -23,7 +23,6 @@
 def nf_nf_core_scrnaseq(
     run_name: str,
     input: List[SampleSheet],
-    outdir: LatchOutputDir,
     email: Optional[str],
     multiqc_title: Optional[str],
     barcode_whitelist: Optional[LatchFile],
@@ -57,6 +56,7 @@ def nf_nf_core_scrnaseq(
     kb_workflow: Optional[kb_workflow] = kb_workflow.std,
     save_reference: bool = False,
     skip_emptydrops: bool = True,
+    outdir: LatchOutputDir = LatchOutputDir("latch:///SingleCellRNAseq"),
 ) -> LatchOutputDir:
     """
     nf-core/scrnaseq is a bioinformatics best-practice analysis pipeline for processing 10x Genomics single-cell RNA-seq data.