preamble.tex

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%PANDOC SPECIFIC SHIT, TAKEN FROM ANOTHER TEMPLATE...

%Deal with margins and other geometry stuff
\usepackage[margin=1.1in]{geometry}
\usepackage{fontspec}
\setmainfont{MinionPro-Regular.otf}[
Path = /Users/lucydelaney/Library/Fonts/,
BoldFont = MinionPro-Bold.otf,
ItalicFont = MinionPro-It.otf,
BoldItalicFont  = MinionPro-BoldIt.otf]
\usepackage[labelfont=bf]{caption}


%Double-spacing or whatever...
\usepackage{setspace}
\setstretch{1.5}


\usepackage{amssymb,amsmath}
\usepackage{halloweenmath}
\usepackage{ifxetex,ifluatex}
\usepackage{fixltx2e} % provides \textsubscript
\usepackage{enumitem}
\usepackage{chemfig}

%For LIST spacing
\providecommand{\tightlist}{%
  \setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}}
\setlist[itemize]{labelsep=1em, leftmargin=*}
\renewcommand\labelitemi{\(\mathwitch\)}

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%% LUCY'S DOCUMENT PREAMBLE AND PACKAGES

% no widows or orphans
\widowpenalty10000
\clubpenalty10000

\usepackage{pdflscape}
\usepackage{pdfpages}
\usepackage{xcolor}
\definecolor{light-gray}{gray}{0.95}

\usepackage{lastpage}

\usepackage[most]{tcolorbox}
\newtcolorbox{blackbox}[1]{
  colback=light-gray,
  colframe=black,
  coltext=black,
  boxsep=2pt,
  arc=4pt,
  title={#1}, after= {\vspace{3mm}}}

\newtcolorbox{mybox}[2][]{colback=white,
colframe=white!75!black,colbacktitle=black!65!white, toptitle=2pt, before={\vspace{-0.8cm}}, after= {\vspace{-1cm}}, title={#2},#1}

%\usepackage[round]{natbib}
\usepackage[natbibapa]{apacite} 
\usepackage[hyphens]{url}

%Set paragraph indent and between paragraph spacing
\setlength\parindent{0pt}
\setlength{\parskip}{4.5pt}

%Deal with titles and make them less stupid and ugly
\usepackage{titlesec}
\titleformat{\section}[block]{\bfseries\sc\filcenter}{}{1em}{}
\titleformat{\subsection}[hang]{\bfseries}{}{1em}{}
\setcounter{secnumdepth}{0}

\usepackage[hyphens]{url}
\usepackage{hyperref}
\hypersetup{
    colorlinks=true,
    linkcolor=violet,
    filecolor=cyan,      
    urlcolor=violet,
    citecolor = black
}

\let\oldhref\href
\renewcommand{\href}[2]{\oldhref{#1}{\bfseries#2}}


%Need all these for graphics and tables
\usepackage{marginnote}
\usepackage{subfig}
\usepackage{graphicx}
\usepackage{blindtext}
\usepackage{array}
\usepackage{wrapfig}
\usepackage{wallpaper}
\usepackage{float}

\renewcommand\chaptername{Unit}
\renewcommand{\chaptermark}[1]{\markboth{#1}{#1}}

%Header and footer junk
\usepackage{fancyhdr}
\pagestyle{fancy}
\fancyhead[C]{}{}
\fancyhead[L]{Biol 002: Cellular Basis of Life \(\cdot\) Spring 2022}
\fancyhead[R]{\leftmark}
\fancyfoot[L]{\tiny{\textit{Version date: \today\\Lucy Delaney}}}
    \fancyfoot[R]{\thepage\ of \pageref{LastPage}}
\fancyfoot[C]{}