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bwa alignment of Nanopro sequences to call the transposable elements (TEs) #420

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Anees-caas opened this issue Jun 6, 2024 · 0 comments
Open

bwa alignment of Nanopro sequences to call the transposable elements (TEs) #420

Anees-caas opened this issue Jun 6, 2024 · 0 comments

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@Anees-caas
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Hi, I am trying to align the long reads (Nanopro) to the reference genome after the alignment my purpose is to use the alignment Bams for identification of transposable elements. my query: what algorithms should I set? considering the mentioned aim.
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