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GATK segmentation might fail when all variants on a chromosome are filtered out. #343

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lima1 opened this issue Jan 16, 2024 · 0 comments
Open

GATK segmentation might fail when all variants on a chromosome are filtered out. #343

lima1 opened this issue Jan 16, 2024 · 0 comments
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bug gatk4 All things related to GATK4/Mutect2

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lima1 commented Jan 16, 2024

Headers then lack the contig and gatk stops because of different contigs in input files.
@lima1 lima1 added the bug label Jan 16, 2024
@lima1 lima1 added the gatk4 All things related to GATK4/Mutect2 label Jan 29, 2024
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