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RungeKutta4.conf
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# This is a configure file for 4th order Runge-Kutta.
# Author : Mingcheng Chen
# Last Update : January 28th, 2013
numOfTimePoints = 26 #27 #1000
numOfFrames = 26
timePoints = [3040 3080 3120 3160 3200 3240 3280 3320 3360 3400 3440 3480 3520 3560 3600 3640 3680 3720 3760 3800 3840 3880 3920 3960 4000 4040] # Only the first 10 points matter.
dataFilePrefix = "./patient2/Patient2Rest_vel" #"./patient2/velocity"
dataFileSuffix = "vtk"
dataFileIndices = [3040 3080 3120 3160 3200 3240 3280 3320 3360 3400 3440 3480 3520 3560 3600 3640 3680 3720 3760 3800 3840 3880 3920 3960 4000 4040] # Only the first 10 points matter.
integration = "RK4"
timeStep = 0.0001 # This is only used for non-adaptive methods
timeInterval = 0.04 #1.0
blockSize = 0.15
epsilonForTetBlkIntersection = 1e-10
epsilon = 1e-8
marginRatio = 0.3
# double = disabled
unitTestForTetBlkIntersection = disabled
unitTestForInitialCellLocation = enabled
# depraved reportTimePerKernel = enabled
# depraved reportTimePerInterval = disabled
# depraved reportTotalTracingTime = enabled
# depraved reportNumOfActiveParticles = disabled
numOfBanks = 32 # Do not forget to set in lcsExclusiveScanForIntKernels.cl as well
sharedMemoryKilobytes = 100
boundingBoxMinX = -1.7
boundingBoxMaxX = -0.87
boundingBoxMinY = -0.728
boundingBoxMaxY = 0.00849
boundingBoxMinZ = 11
boundingBoxMaxZ = 12.3
# boundingBoxMinX = 0.9
# boundingBoxMaxX = 2.5
# boundingBoxMinY = -2.05
# boundingBoxMaxY = -0.35
# boundingBoxMinZ = 2.1
# boundingBoxMaxZ = 2.15
boundingBoxXRes = 200 #200 #80
boundingBoxYRes = 200 #200 #300
boundingBoxZRes = 200 #300