#Neurotune
This package provides Neurotune, a package for optimizing electical models of excitable cells.
This package was originally developed by Mike Vella. This has been updated by Padraig Gleeson and others (and moved to NeuralEnsemble) to continue development of pyelectro and Neurotune for use in OpenWorm, Open Source Brain and other projects
Full documentation can be found here.
The following (Python libraries) can be installed using pip, easy_install, or ideally using Anaconda:
Hard dependencies
- numpy
- inspyred
- SciPy
The package pyelectro is also required:
git clone https://github.com/NeuralEnsemble/pyelectro.git
cd pyelectro
sudo python setup.py install
Soft dependencies
- neuronpy (Note: it's best to install neuron from source & install for Python)
Install Neurotune with the following command:
sudo python setup.py install
Note: the Travic CI script shows the full set of commands for installation & execution of a simple example.