Merge pull request #366 from azneto/master

Updates dependencies and Github Actions

Author: azneto

.github/workflows/django.yml

@@ -12,8 +12,8 @@ jobs:
     strategy:
       max-parallel: 4
       matrix:
-        python-version: ['3.8', '3.9', '3.10', '3.11']
-        os: [ubuntu-20.04, ubuntu-22.04]
+        python-version: ['3.10', '3.11', '3.12']
+        os: [ubuntu-22.04, ubuntu-24.04]
     runs-on: ${{ matrix.os }}
 
     services:

setup.py

@@ -29,19 +29,19 @@
     ],
     scripts=["bin/fixChadoModel.py"],
     install_requires=[
-        "django~=4.2.14",
-        "psycopg2-binary~=2.9.5",
-        "networkx~=2.8.8",
-        "obonet~=0.3.1",
-        "biopython~=1.80",
-        "tqdm~=4.66.3",
+        "django~=5.1.1",
+        "psycopg2-binary~=2.9.9",
+        "networkx~=3.3",
+        "obonet~=1.1.0",
+        "biopython~=1.84",
+        "tqdm~=4.66.5",
         "typing~=3.7.4.3",
-        "bibtexparser~=1.4.0",
+        "bibtexparser~=1.4.1",
         "djangorestframework~=3.15.2",
-        "drf-yasg==1.21.4",
-        "drf-nested-routers~=0.93.4",
-        "pysam~=0.20.0",
-        "django-haystack~=3.2.1",
+        "drf-yasg==1.21.7",
+        "drf-nested-routers~=0.94.1",
+        "pysam~=0.22.1",
+        "django-haystack~=3.3.0",
     ],
     zip_safe=False,
 )