diff --git a/Makefile b/Makefile index bb606af..9555369 100644 --- a/Makefile +++ b/Makefile @@ -41,4 +41,5 @@ test: # non-functional # done # @echo "Database Ready for connections!" # docker logs dbtestgn2pg | grep "database system is ready to accept connections" + poetry install poetry run pytest --user=${GEONATURE_USER} --password=${GEONATURE_PASSWORD} --url=${GEONATURE_URL} --db-user=dbuser --db-password=dbpass --db-port=5234 --export-id=${GEONATURE_EXPORT_ID} --nb-threads=${GEONATURE_NB_THREADS} tests diff --git a/gn2pg/api.py b/gn2pg/api.py index 2a10ea1..e6faf6b 100644 --- a/gn2pg/api.py +++ b/gn2pg/api.py @@ -85,7 +85,9 @@ def __init__( ) except Exception as error: - logger.critical("Session failed (%s)", error) + logger.critical( + "Session failed (%s), HTTP status code is %s", error, login.status_code + ) raise HTTPError(login.status_code) from error #  Find exports api path @@ -186,7 +188,7 @@ def page_list( if response.status_code == 200: resp = response.json() - total_filtered = resp["total_filtered"] + total_filtered = resp["total_filtered"] if "total_filtered" in resp else resp["total"] total_pages = math.ceil(total_filtered / params.get("limit")) logger.debug( _("API %s contains %s data in %s page(s)"), diff --git a/gn2pg/data/to_gnsynthese.sql b/gn2pg/data/to_gnsynthese.sql index 7e36c43..e23f673 100644 --- a/gn2pg/data/to_gnsynthese.sql +++ b/gn2pg/data/to_gnsynthese.sql @@ -39,10 +39,9 @@ BEGIN , 'Description of acquisition framework : ' || _name , now() , now() - WHERE NOT exists( - SELECT 1 - FROM gn_meta.t_acquisition_frameworks - WHERE unique_acquisition_framework_id = _uuid); + WHERE NOT exists(SELECT 1 + FROM gn_meta.t_acquisition_frameworks + WHERE unique_acquisition_framework_id = _uuid); SELECT id_acquisition_framework INTO the_af_id FROM gn_meta.t_acquisition_frameworks @@ -84,10 +83,9 @@ BEGIN , TRUE , TRUE , now() - WHERE NOT exists( - SELECT 1 - FROM gn_meta.t_datasets - WHERE unique_dataset_id = _uuid); + WHERE NOT exists(SELECT 1 + FROM gn_meta.t_datasets + WHERE unique_dataset_id = _uuid); SELECT id_dataset INTO the_dataset_id FROM gn_meta.t_datasets @@ -114,10 +112,9 @@ DECLARE BEGIN INSERT INTO gn_synthese.t_sources (name_source) SELECT _source - WHERE NOT exists( - SELECT 1 - FROM gn_synthese.t_sources - WHERE name_source = _source); + WHERE NOT exists(SELECT 1 + FROM gn_synthese.t_sources + WHERE name_source = _source); SELECT id_source INTO the_source_id FROM gn_synthese.t_sources @@ -163,7 +160,6 @@ CREATE UNIQUE INDEX IF NOT EXISTS uidx_synthese_id_source_id_entity_source_pk_va - DROP FUNCTION IF EXISTS gn2pg_import.fct_c_insert_ds_territories(_id_ds INTEGER, _territories JSONB); CREATE OR REPLACE FUNCTION gn2pg_import.fct_c_insert_ds_territories(_id_ds INTEGER, _territories JSONB) RETURNS VOID @@ -210,8 +206,9 @@ BEGIN VALUES ( (_actor_role ->> 'uuid_actor')::UUID , _actor_role #>> '{identity,first_name}' , _actor_role #>> '{identity,last_name}' - , _actor_role ->> 'email' - , jsonb_build_object('source', _source, 'module', 'gn2pg')) + , NULL + , jsonb_build_object('source', _source, 'module', 'gn2pg', 'gn2pg_data', + jsonb_build_object('email', _actor_role ->> 'email'))) ON CONFLICT (uuid_role) DO NOTHING; SELECT id_role INTO the_id_actor @@ -310,10 +307,9 @@ BEGIN -- , jsonb_build_object('source', _source, 'module', 'gn2pg') , now() , now() - WHERE NOT exists( - SELECT 1 - FROM gn_meta.t_acquisition_frameworks - WHERE unique_acquisition_framework_id = (_af_data #>> '{uuid}')::UUID); + WHERE NOT exists(SELECT 1 + FROM gn_meta.t_acquisition_frameworks + WHERE unique_acquisition_framework_id = (_af_data #>> '{uuid}')::UUID); SELECT id_acquisition_framework INTO the_af_id FROM gn_meta.t_acquisition_frameworks @@ -367,10 +363,9 @@ BEGIN -- , jsonb_build_object('source', _source, 'module', 'gn2pg') , now() , now() - WHERE NOT exists( - SELECT 1 - FROM gn_meta.t_datasets - WHERE unique_dataset_id = (_ds_data #>> '{uuid}')::UUID); + WHERE NOT exists(SELECT 1 + FROM gn_meta.t_datasets + WHERE unique_dataset_id = (_ds_data #>> '{uuid}')::UUID); SELECT id_dataset INTO the_dataset_id FROM gn_meta.t_datasets @@ -396,10 +391,9 @@ DECLARE BEGIN INSERT INTO gn_synthese.t_sources (name_source) SELECT _source - WHERE NOT exists( - SELECT 1 - FROM gn_synthese.t_sources - WHERE name_source = _source); + WHERE NOT exists(SELECT 1 + FROM gn_synthese.t_sources + WHERE name_source = _source); SELECT id_source INTO the_source_id FROM gn_synthese.t_sources @@ -486,146 +480,164 @@ BEGIN INTO the_id_source; SELECT new.item #>> '{id_synthese}' INTO the_entity_source_pk_value; - SELECT - CASE new.type - WHEN 'synthese_with_metadata' THEN gn2pg_import.fct_c_get_or_insert_af_from_af_jsondata(new.item #> '{ca_data}', new.source) - ELSE gn2pg_import.fct_c_get_or_insert_basic_af_from_uuid_name(cast(new.item #>> '{ca_uuid}' AS UUID), new.item #>> '{ca_nom}') - END AS the_id_af + SELECT CASE new.type + WHEN 'synthese_with_metadata' THEN gn2pg_import.fct_c_get_or_insert_af_from_af_jsondata( + new.item #> '{ca_data}', new.source) + ELSE gn2pg_import.fct_c_get_or_insert_basic_af_from_uuid_name(cast(new.item #>> '{ca_uuid}' AS UUID), + new.item #>> '{ca_nom}') + END AS the_id_af INTO the_id_af; - SELECT - CASE new.type - WHEN 'synthese_with_metadata' then gn2pg_import.fct_c_get_or_insert_dataset_from_jsondata( - new.item #> '{jdd_data}', - the_id_af, - new.source - ) - ELSE gn2pg_import.fct_c_get_or_insert_basic_dataset_from_uuid_name( - cast(new.item #>> '{jdd_uuid}' AS UUID), - new.item #>> '{jdd_nom}', - the_id_af - ) - END AS id_dataset + SELECT CASE new.type + WHEN 'synthese_with_metadata' THEN gn2pg_import.fct_c_get_or_insert_dataset_from_jsondata( + new.item #> '{jdd_data}', + the_id_af, + new.source + ) + ELSE gn2pg_import.fct_c_get_or_insert_basic_dataset_from_uuid_name( + cast(new.item #>> '{jdd_uuid}' AS UUID), + new.item #>> '{jdd_nom}', + the_id_af + ) + END AS id_dataset INTO the_id_dataset; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('NAT_OBJ_GEO', new.item #>> '{nature_objet_geo}') - ELSE ref_nomenclatures.get_id_nomenclature('NAT_OBJ_GEO', new.item #>> '{nature_objet_geo}') - END AS id_nomenclature_geo_object_nature + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('NAT_OBJ_GEO', + new.item #>> + '{nature_objet_geo}') + ELSE ref_nomenclatures.get_id_nomenclature('NAT_OBJ_GEO', new.item #>> '{nature_objet_geo}') + END AS id_nomenclature_geo_object_nature INTO the_id_nomenclature_geo_object_nature; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('TYP_GRP', new.item #>> '{type_regroupement}') - ELSE ref_nomenclatures.get_id_nomenclature('TYP_GRP', new.item #>> '{type_regroupement}') - END AS id_nomenclature_grp_typ + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('TYP_GRP', new.item #>> + '{type_regroupement}') + ELSE ref_nomenclatures.get_id_nomenclature('TYP_GRP', new.item #>> '{type_regroupement}') + END AS id_nomenclature_grp_typ INTO the_id_nomenclature_grp_typ; SELECT new.item #>> '{methode_regroupement}' INTO the_grp_method; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('METH_OBS', new.item #>> '{technique_obs}') - ELSE ref_nomenclatures.get_id_nomenclature('METH_OBS', new.item #>> '{technique_obs}') - END AS id_nomenclature_obs_technique + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('METH_OBS', + new.item #>> + '{technique_obs}') + ELSE ref_nomenclatures.get_id_nomenclature('METH_OBS', new.item #>> '{technique_obs}') + END AS id_nomenclature_obs_technique INTO the_id_nomenclature_obs_technique; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STATUT_BIO', new.item #>> '{statut_biologique}') - ELSE ref_nomenclatures.get_id_nomenclature('STATUT_BIO', new.item #>> '{statut_biologique}') - END AS id_nomenclature_bio_status + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STATUT_BIO', + new.item #>> + '{statut_biologique}') + ELSE ref_nomenclatures.get_id_nomenclature('STATUT_BIO', new.item #>> '{statut_biologique}') + END AS id_nomenclature_bio_status INTO the_id_nomenclature_bio_status; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('ETA_BIO', new.item #>> '{etat_biologique}') - ELSE ref_nomenclatures.get_id_nomenclature('ETA_BIO', new.item #>> '{etat_biologique}') - END AS id_nomenclature_bio_condition + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('ETA_BIO', new.item #>> + '{etat_biologique}') + ELSE ref_nomenclatures.get_id_nomenclature('ETA_BIO', new.item #>> '{etat_biologique}') + END AS id_nomenclature_bio_condition INTO the_id_nomenclature_bio_condition; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('NATURALITE', new.item #>> '{naturalite}') - ELSE ref_nomenclatures.get_id_nomenclature('NATURALITE', new.item #>> '{naturalite}') - END AS id_nomenclature_naturalness + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('NATURALITE', + new.item #>> + '{naturalite}') + ELSE ref_nomenclatures.get_id_nomenclature('NATURALITE', new.item #>> '{naturalite}') + END AS id_nomenclature_naturalness INTO the_id_nomenclature_naturalness; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('PREUVE_EXIST', new.item #>> '{preuve_existante}') - ELSE ref_nomenclatures.get_id_nomenclature('PREUVE_EXIST', new.item #>> '{preuve_existante}') - END AS id_nomenclature_exist_proof + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('PREUVE_EXIST', + new.item #>> + '{preuve_existante}') + ELSE ref_nomenclatures.get_id_nomenclature('PREUVE_EXIST', new.item #>> '{preuve_existante}') + END AS id_nomenclature_exist_proof INTO the_id_nomenclature_exist_proof; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STATUT_VALID', new.item #>> '{statut_validation}') - ELSE ref_nomenclatures.get_id_nomenclature('STATUT_VALID', new.item #>> '{statut_validation}') - END AS id_nomenclature_valid_status + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STATUT_VALID', + new.item #>> + '{statut_validation}') + ELSE ref_nomenclatures.get_id_nomenclature('STATUT_VALID', new.item #>> '{statut_validation}') + END AS id_nomenclature_valid_status INTO the_id_nomenclature_valid_status; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('NIV_PRECIS', new.item #>> '{precision_diffusion}') - ELSE ref_nomenclatures.get_id_nomenclature('NIV_PRECIS', new.item #>> '{precision_diffusion}') - END AS id_nomenclature_diffusion_level + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('NIV_PRECIS', + new.item #>> + '{precision_diffusion}') + ELSE ref_nomenclatures.get_id_nomenclature('NIV_PRECIS', new.item #>> '{precision_diffusion}') + END AS id_nomenclature_diffusion_level INTO the_id_nomenclature_diffusion_level; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STADE_VIE', new.item #>> '{stade_vie}') - ELSE ref_nomenclatures.get_id_nomenclature('STADE_VIE', new.item #>> '{stade_vie}') - END AS id_nomenclature_life_stage + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STADE_VIE', + new.item #>> + '{stade_vie}') + ELSE ref_nomenclatures.get_id_nomenclature('STADE_VIE', new.item #>> '{stade_vie}') + END AS id_nomenclature_life_stage INTO the_id_nomenclature_life_stage; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('SEXE', new.item #>> '{sexe}') - ELSE ref_nomenclatures.get_id_nomenclature('SEXE', new.item #>> '{sexe}') - END AS id_nomenclature_sex + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('SEXE', + new.item #>> '{sexe}') + ELSE ref_nomenclatures.get_id_nomenclature('SEXE', new.item #>> '{sexe}') + END AS id_nomenclature_sex INTO the_id_nomenclature_sex; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('OBJ_DENBR', new.item #>> '{objet_denombrement}') - ELSE ref_nomenclatures.get_id_nomenclature('OBJ_DENBR', new.item #>> '{objet_denombrement}') - END AS id_nomenclature_obj_count + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('OBJ_DENBR', + new.item #>> + '{objet_denombrement}') + ELSE ref_nomenclatures.get_id_nomenclature('OBJ_DENBR', new.item #>> '{objet_denombrement}') + END AS id_nomenclature_obj_count INTO the_id_nomenclature_obj_count; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('TYP_DENBR', new.item #>> '{type_denombrement}') - ELSE ref_nomenclatures.get_id_nomenclature('TYP_DENBR', new.item #>> '{type_denombrement}') - END AS id_nomenclature_type_count + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('TYP_DENBR', + new.item #>> + '{type_denombrement}') + ELSE ref_nomenclatures.get_id_nomenclature('TYP_DENBR', new.item #>> '{type_denombrement}') + END AS id_nomenclature_type_count INTO the_id_nomenclature_type_count; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('SENSIBILITE', new.item #>> '{niveau_sensibilite}') - ELSE ref_nomenclatures.get_id_nomenclature('SENSIBILITE', new.item #>> '{niveau_sensibilite}') - END AS id_nomenclature_sensitivity + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('SENSIBILITE', + new.item #>> + '{niveau_sensibilite}') + ELSE ref_nomenclatures.get_id_nomenclature('SENSIBILITE', new.item #>> '{niveau_sensibilite}') + END AS id_nomenclature_sensitivity INTO the_id_nomenclature_sensitivity; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STATUT_OBS', new.item #>> '{statut_observation}') - ELSE ref_nomenclatures.get_id_nomenclature('STATUT_OBS', new.item #>> '{statut_observation}') - END AS id_nomenclature_observation_status + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STATUT_OBS', + new.item #>> + '{statut_observation}') + ELSE ref_nomenclatures.get_id_nomenclature('STATUT_OBS', new.item #>> '{statut_observation}') + END AS id_nomenclature_observation_status INTO the_id_nomenclature_observation_status; SELECT CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('DEE_FLOU', new.item #>> '{floutage_dee}') - ELSE ref_nomenclatures.get_id_nomenclature('DEE_FLOU', new.item #>> '{floutage_dee}') - END AS id_nomenclature_blurring + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('DEE_FLOU', + new.item #>> + '{floutage_dee}') + ELSE ref_nomenclatures.get_id_nomenclature('DEE_FLOU', new.item #>> '{floutage_dee}') + END AS id_nomenclature_blurring INTO the_id_nomenclature_blurring; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STATUT_SOURCE', new.item #>> '{statut_source}') - ELSE ref_nomenclatures.get_id_nomenclature('STATUT_SOURCE', new.item #>> '{statut_source}') - END AS id_nomenclature_source_status + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STATUT_SOURCE', + new.item #>> + '{statut_source}') + ELSE ref_nomenclatures.get_id_nomenclature('STATUT_SOURCE', new.item #>> '{statut_source}') + END AS id_nomenclature_source_status INTO the_id_nomenclature_source_status; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('TYP_INF_GEO', new.item #>> '{type_info_geo}') - ELSE ref_nomenclatures.get_id_nomenclature('TYP_INF_GEO', new.item #>> '{type_info_geo}') - END AS id_nomenclature_info_geo_type + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('TYP_INF_GEO', + new.item #>> + '{type_info_geo}') + ELSE ref_nomenclatures.get_id_nomenclature('TYP_INF_GEO', new.item #>> '{type_info_geo}') + END AS id_nomenclature_info_geo_type INTO the_id_nomenclature_info_geo_type; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('OCC_COMPORTEMENT', new.item #>> '{comportement}') - ELSE ref_nomenclatures.get_id_nomenclature('OCC_COMPORTEMENT', new.item #>> '{comportement}') - END AS id_nomenclature_behaviour + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('OCC_COMPORTEMENT', + new.item #>> + '{comportement}') + ELSE ref_nomenclatures.get_id_nomenclature('OCC_COMPORTEMENT', new.item #>> '{comportement}') + END AS id_nomenclature_behaviour INTO the_id_nomenclature_behaviour; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STAT_BIOGEO', new.item #>> '{statut_biogeo}') - ELSE ref_nomenclatures.get_id_nomenclature('STAT_BIOGEO', new.item #>> '{statut_biogeo}') - END AS id_nomenclature_biogeo_status + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('STAT_BIOGEO', + new.item #>> + '{statut_biogeo}') + ELSE ref_nomenclatures.get_id_nomenclature('STAT_BIOGEO', new.item #>> '{statut_biogeo}') + END AS id_nomenclature_biogeo_status INTO the_id_nomenclature_biogeo_status; SELECT new.item #>> '{reference_biblio}' INTO the_reference_biblio; @@ -679,11 +691,11 @@ BEGIN INTO the_determiner; SELECT NULL INTO the_id_digitiser; - SELECT - CASE new.type - WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('TYPE', new.item #>> '{label}') - ELSE ref_nomenclatures.get_id_nomenclature('TYPE', new.item #>> '{label}') - END AS id_nomenclature_determination_method + SELECT CASE new.type + WHEN 'synthese_with_label' THEN gn2pg_import.fct_c_get_id_nomenclature_from_label('TYPE', + new.item #>> '{label}') + ELSE ref_nomenclatures.get_id_nomenclature('TYPE', new.item #>> '{label}') + END AS id_nomenclature_determination_method INTO the_id_nomenclature_determination_method; SELECT new.item #>> '{comment_releve}' INTO the_comment_context; @@ -881,7 +893,7 @@ CREATE TRIGGER tri_c_upsert_data_to_geonature AFTER INSERT OR UPDATE ON gn2pg_import.data_json FOR EACH ROW - EXECUTE PROCEDURE gn2pg_import.fct_tri_c_upsert_data_to_geonature(); +EXECUTE PROCEDURE gn2pg_import.fct_tri_c_upsert_data_to_geonature(); -- DELETE CREATE OR REPLACE FUNCTION gn2pg_import.fct_tri_c_delete_data_from_geonature() RETURNS TRIGGER @@ -909,4 +921,4 @@ CREATE TRIGGER tri_c_delete_data_from_geonature WHEN (old.type IN ('synthese_with_label', 'synthese_with_cd_nomenclature', 'synthese_with_metadata')) EXECUTE PROCEDURE gn2pg_import.fct_tri_c_delete_data_from_geonature(); -COMMIT; \ No newline at end of file +COMMIT; diff --git a/gn2pg/download.py b/gn2pg/download.py index 8dec821..34bc634 100644 --- a/gn2pg/download.py +++ b/gn2pg/download.py @@ -80,9 +80,6 @@ def launch_treads(self, nb_threads: int, func: Callable, pages: list, store=True func (Callable): function that each thread will call pages (list): list of pages store (bool): if True, display Storing in logger - - Returns: - None """ def report(queue) -> None: @@ -127,9 +124,6 @@ def download(self, page: str, queue: Queue) -> None: Args: page (str): url to download queue (Queue): gather the progress - - Returns: - None """ response = self.process_progress(page=page) @@ -143,14 +137,11 @@ def delete(self, page: str, queue: Queue) -> None: Args: page (str): url to download queue (Queue): gather the progress - - Returns: - None """ response = self.process_progress(page=page) if response.get("total_len") > 0: - self._backend.store_data(self._backend.delete_data(response.get("items"))) + self._backend.delete_data(response.get("items")) queue.put(response) else: logger.info( @@ -175,15 +166,11 @@ def process_progress(self, page: str) -> dict: return { "items": items, "len_items": len_items, - "total_len": resp["total_filtered"], + "total_len": resp["total_filtered"] if "total_filtered" in resp else resp["total"], } def store(self) -> None: - """Store data into Database - - Returns: - None - """ + """Store data into Database""" # Store start download TimeStamp to populate increment log after download end. increment_ts = datetime.now() @@ -209,9 +196,7 @@ def update(self, since: Optional[str] = None, actions: Optional[list] = None) -> Args: since (str): DateTime limit to update. - - Returns: - [type]: [description] + actions (list): Actions list (Insert > I, Update > U, Delete > D) """ # Update new or modified data from API logger.debug(_("Updating items from controler %s"), self._api_instance.controler) @@ -259,7 +244,7 @@ def update(self, since: Optional[str] = None, actions: Optional[list] = None) -> deleted_pages = self._api_instance.page_list( kind="log", params={ - "filter_d_up_meta_last_action_date": since, + "meta_last_action_date": f"gte:{since}", "limit": self._config.max_page_length, "last_action": "D", }, diff --git a/gn2pg/metadata.py b/gn2pg/metadata.py index 3ea8a35..8ede4aa 100644 --- a/gn2pg/metadata.py +++ b/gn2pg/metadata.py @@ -8,7 +8,7 @@ PACKAGE = "gn2pg_client" PROJECT = "GeoNature 2 PostgreSQL Client application" PROJECT_NO_SPACES = PROJECT.replace(" ", "") -VERSION = "1.3.1" +VERSION = "1.6.0" DESCRIPTION = "Import tool from GeoNature to a PostgreSQL database through Export module API" AUTHORS = [ "@lpofredc (LPOAuRA)", diff --git a/poetry.lock b/poetry.lock index 5eda672..79e44ed 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,18 +1,26 @@ +# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand. + [[package]] name = "alabaster" version = "0.7.13" description = "A configurable sidebar-enabled Sphinx theme" -category = "dev" optional = false python-versions = ">=3.6" +files = [ + {file = "alabaster-0.7.13-py3-none-any.whl", hash = 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