Error when building an environment with docker #159
Description
Describe the bug
Building wheels for collected packages: marius
Building wheel for marius (pyproject.toml) ... error
error: subprocess-exited-with-error
× Building wheel for marius (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [74 lines of output]
subprocess.CalledProcessError: Command '['cmake', '/working_dir', '-DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/working_dir/build/lib.linux-x86_64-3.10/marius', '-DPYTHON_EXECUTABLE=/usr/bin/python3', '-DCMAKE_BUILD_TYPE=Release', '-DCMAKE_BUILD_WITH_INSTALL_RPATH=TRUE', '-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=TRUE', '-DUSE_CUDA=TRUE', '-DUSE_OMP=TRUE', '-DCMAKE_INSTALL_RPATH=$ORIGIN']' returned non-zero exit status 1.
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for marius
Failed to build marius
ERROR: Could not build wheels for marius, which is required to install pyproject.toml-based projects
To Reproduce
Steps to reproduce the behavior:
1.CURRENT_DIR=pwd
2.git clone https://github.com/marius-team/marius.git
3.cd marius/examples/docker/
4.docker build -t marius:latest gpu_ubuntu/.
5.docker run --gpus all -it -v $CURRENT_DIR:/working_dir/ marius:latest bash
6.cd marius
7.pip3 install . --no-build-isolation
after the last step,the error happened
int order to down it I change the dockerfile FROM nvidia/cuda:11.8.0-cudnn8-devel-ubuntu22.04 to FROM nvidia/cuda:11.8.0-base-ubuntu22.04
Expected behavior
build the marius correctly
Environment
List your operating system, and dependency versions. You can obtain this by running marius_env_info from the command line.
Additional context
Building wheels for collected packages: marius
Building wheel for marius (pyproject.toml) ... error
error: subprocess-exited-with-error
× Building wheel for marius (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [74 lines of output]
running bdist_wheel
running build
running build_py
running egg_info
writing marius.egg-info/PKG-INFO
writing dependency_links to marius.egg-info/dependency_links.txt
writing entry points to marius.egg-info/entry_points.txt
writing requirements to marius.egg-info/requires.txt
writing top-level names to marius.egg-info/top_level.txt
reading manifest file 'marius.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files matching '.py[cod]' found anywhere in distribution
warning: no previously-included files matching 'pycache' found anywhere in distribution
warning: no previously-included files matching '.so' found anywhere in distribution
warning: no previously-included files matching '.dylib' found anywhere in distribution
warning: no previously-included files matching '.DS_Store' found anywhere in distribution
warning: no previously-included files matching '.gpickle' found anywhere in distribution
adding license file 'LICENSE'
writing manifest file 'marius.egg-info/SOURCES.txt'
running build_ext
CMake Error at /usr/local/lib/python3.10/dist-packages/cmake/data/share/cmake-3.31/Modules/Internal/CMakeCUDAFindToolkit.cmake:104 (message):
Failed to find nvcc.
Compiler requires the CUDA toolkit. Please set the CUDAToolkit_ROOT
variable.
Call Stack (most recent call first):
/usr/local/lib/python3.10/dist-packages/cmake/data/share/cmake-3.31/Modules/CMakeDetermineCUDACompiler.cmake:85 (cmake_cuda_find_toolkit)
CMakeLists.txt:36 (enable_language)
-- Configuring incomplete, errors occurred!
['-DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/working_dir/build/lib.linux-x86_64-3.10/marius', '-DPYTHON_EXECUTABLE=/usr/bin/python3', '-DCMAKE_BUILD_TYPE=Release', '-DCMAKE_BUILD_WITH_INSTALL_RPATH=TRUE', '-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=TRUE', '-DUSE_CUDA=TRUE', '-DUSE_OMP=TRUE', '-DCMAKE_INSTALL_RPATH=$ORIGIN']
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 363, in <module>
main()
File "/usr/lib/python3/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 345, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
File "/usr/lib/python3/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 261, in build_wheel
return _build_backend().build_wheel(wheel_directory, config_settings,
File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 230, in build_wheel
return self._build_with_temp_dir(['bdist_wheel'], '.whl',
File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 215, in _build_with_temp_dir
self.run_setup()
File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 158, in run_setup
exec(compile(code, __file__, 'exec'), locals())
File "setup.py", line 81, in <module>
setup(
File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 153, in setup
return distutils.core.setup(**attrs)
File "/usr/lib/python3.10/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.10/distutils/dist.py", line 966, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 299, in run
self.run_command('build')
File "/usr/lib/python3.10/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/usr/lib/python3.10/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/usr/lib/python3.10/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.10/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "setup.py", line 30, in run
self.build_extension(ext)
File "setup.py", line 72, in build_extension
subprocess.check_call(["cmake", ext.sourcedir] + cmake_args, cwd=self.build_temp, env=env)
File "/usr/lib/python3.10/subprocess.py", line 369, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['cmake', '/working_dir', '-DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/working_dir/build/lib.linux-x86_64-3.10/marius', '-DPYTHON_EXECUTABLE=/usr/bin/python3', '-DCMAKE_BUILD_TYPE=Release', '-DCMAKE_BUILD_WITH_INSTALL_RPATH=TRUE', '-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=TRUE', '-DUSE_CUDA=TRUE', '-DUSE_OMP=TRUE', '-DCMAKE_INSTALL_RPATH=$ORIGIN']' returned non-zero exit status 1.
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for marius
Failed to build marius
ERROR: Could not build wheels for marius, which is required to install pyproject.toml-based projects