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tasks.py
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tasks.py
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"""
Pyinvoke tasks.py file for automating releases and admin stuff.
To cut a new pymatgen release:
invoke update-changelog
invoke release
"""
from __future__ import annotations
import json
import os
import re
import subprocess
import webbrowser
from datetime import datetime, timezone
from typing import TYPE_CHECKING
import requests
from invoke import task
from monty.os import cd
from pymatgen.core import __version__
if TYPE_CHECKING:
from invoke import Context
@task
def make_doc(ctx: Context) -> None:
"""
Generate API documentation + run Sphinx.
Args:
ctx (Context): The context.
"""
with cd("docs"):
ctx.run("touch apidoc/index.rst", warn=True)
ctx.run("rm pymatgen.*.rst", warn=True)
# ctx.run("rm pymatgen.*.md", warn=True)
ctx.run("sphinx-apidoc --implicit-namespaces -M -d 7 -o apidoc -f ../src/pymatgen ../**/tests/*")
# Note: we use HTML building for the API docs to preserve search functionality.
ctx.run("sphinx-build -b html apidoc html") # HTML building.
ctx.run("rm apidocs/*.rst", warn=True)
ctx.run("mv html/pymatgen*.html .")
ctx.run("mv html/modules.html .")
# ctx.run("cp markdown/pymatgen*.md .")
# ctx.run("rm pymatgen*tests*.md", warn=True)
# ctx.run("rm pymatgen*.html", warn=True)
# for filename in glob("pymatgen*.md"):
# with open(filename) as file:
# lines = [line.rstrip() for line in file if "Submodules" not in line]
# if filename == "pymatgen.md":
# preamble = ["---", "layout: default", "title: API Documentation", "nav_order: 6", "---", ""]
# else:
# preamble = [
# "---",
# "layout: default",
# f"title: {filename}",
# "nav_exclude: true",
# "---",
# "",
# "1. TOC",
# "{:toc}",
# "",
# ]
# with open(filename, mode="w") as file:
# file.write("\n".join(preamble + lines))
ctx.run("rm -r markdown", warn=True)
ctx.run("rm -r html", warn=True)
ctx.run('sed -I "" "s/_static/assets/g" pymatgen*.html')
ctx.run("rm -rf doctrees", warn=True)
@task
def publish(ctx: Context) -> None:
"""
Upload release to Pypi using twine.
Args:
ctx (Context): The context.
"""
ctx.run("rm dist/*.*", warn=True)
ctx.run("python setup.py sdist bdist_wheel")
ctx.run("twine upload dist/*")
@task
def set_ver(ctx: Context, version: str):
"""
Set version in pyproject.toml file.
Args:
ctx (Context): The context.
version (str): An input version.
"""
with open("pyproject.toml") as file:
lines = [re.sub(r"^version = \"([^,]+)\"", f'version = "{version}"', line.rstrip()) for line in file]
with open("pyproject.toml", "w") as file:
file.write("\n".join(lines) + "\n")
ctx.run("ruff check --fix src")
ctx.run("ruff format pyproject.toml")
@task
def release_github(ctx: Context, version: str) -> None:
"""
Release to Github using Github API.
Args:
ctx (Context): The context.
version (str): The version.
"""
with open("docs/CHANGES.md", encoding="utf-8") as file:
contents = file.read()
tokens = re.split(r"\n\#\#\s", contents)
desc = tokens[1].strip()
tokens = desc.split("\n")
desc = "\n".join(tokens[1:]).strip()
payload = {
"tag_name": f"v{version}",
"target_commitish": "master",
"name": f"v{version}",
"body": desc,
"draft": False,
"prerelease": False,
}
response = requests.post(
"https://api.github.com/repos/materialsproject/pymatgen/releases",
data=json.dumps(payload),
headers={"Authorization": f"token {os.environ['GITHUB_RELEASES_TOKEN']}"},
timeout=60,
)
print(response.text)
@task
def update_changelog(ctx: Context, version: str | None = None, dry_run: bool = False) -> None:
"""Create a preliminary change log using the git logs.
Args:
ctx (invoke.Context): The context object.
version (str, optional): The version to use for the change log. If not provided, it will
use the current date in the format 'YYYY.M.D'. Defaults to None.
dry_run (bool, optional): If True, the function will only print the changes without
updating the actual change log file. Defaults to False.
"""
version = version or f"{datetime.now(tz=timezone.utc):%Y.%-m.%-d}"
output = subprocess.check_output(["git", "log", "--pretty=format:%s", f"v{__version__}..HEAD"])
lines = []
ignored_commits = []
for line in output.decode("utf-8").strip().split("\n"):
re_match = re.match(r"Merge pull request \#(\d+) from (.*)", line)
if re_match and "materialsproject/dependabot/pip" not in line:
pr_number = re_match[1]
contributor, pr_name = re_match[2].split("/", 1)
response = requests.get(
f"https://api.github.com/repos/materialsproject/pymatgen/pulls/{pr_number}",
timeout=60,
)
lines += [f"* PR #{pr_number} from @{contributor} {pr_name}"]
json_resp = response.json()
if body := json_resp["body"]:
for ll in map(str.strip, body.split("\n")):
if ll in ("", "## Summary"):
continue
if ll.startswith(("## Checklist", "## TODO")):
break
lines += [f" {ll}"]
ignored_commits += [line]
with open("docs/CHANGES.md", encoding="utf-8") as file:
contents = file.read()
delim = "##"
tokens = contents.split(delim)
tokens.insert(1, f"## v{version}\n\n" + "\n".join(lines) + "\n")
if dry_run:
print(tokens[0] + "##".join(tokens[1:]))
else:
with open("docs/CHANGES.md", mode="w", encoding="utf-8") as file:
file.write(tokens[0] + "##".join(tokens[1:]))
ctx.run("open docs/CHANGES.md")
print("The following commit messages were not included...")
print("\n".join(ignored_commits))
@task
def release(ctx: Context, version: str | None = None, nodoc: bool = False) -> None:
"""
Run full sequence for releasing pymatgen.
Args:
ctx (invoke.Context): The context object.
version (str, optional): The version to release.
nodoc (bool, optional): Whether to skip documentation generation.
"""
version = version or f"{datetime.now(tz=timezone.utc):%Y.%-m.%-d}"
ctx.run("rm -r dist build pymatgen.egg-info", warn=True)
set_ver(ctx, version)
if not nodoc:
make_doc(ctx)
ctx.run("git add .")
ctx.run('git commit --no-verify -a -m "Update docs"')
ctx.run("git push")
release_github(ctx, version)
ctx.run("rm -f dist/*.*", warn=True)
ctx.run("python -m build", warn=True)
ctx.run("twine upload --skip-existing dist/*.whl", warn=True)
ctx.run("twine upload --skip-existing dist/*.tar.gz", warn=True)
# post_discourse(ctx, warn=True)
@task
def open_doc(ctx: Context) -> None:
"""
Open local documentation in web browser.
Args:
ctx (invoke.Context): The context object.
"""
pth = os.path.abspath("docs/_build/html/index.html")
webbrowser.open(f"file://{pth}")
@task
def lint(ctx: Context) -> None:
"""
Run linting tools.
Args:
ctx (invoke.Context): The context object.
"""
for cmd in ("ruff", "mypy", "ruff format"):
ctx.run(f"{cmd} pymatgen")