From d976b4a12cc0672e1ed9bfb46db10095f37c99c4 Mon Sep 17 00:00:00 2001 From: Mike McCann Date: Wed, 23 Jul 2025 08:29:00 -0700 Subject: [PATCH 1/2] Change fluo_bl_threshold from 0.4 to 0.2. --- src/data/resample.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/data/resample.py b/src/data/resample.py index 34653107..222f4ff8 100755 --- a/src/data/resample.py +++ b/src/data/resample.py @@ -753,7 +753,7 @@ def correct_biolume_proxies( # noqa: C901, PLR0912, PLR0913, PLR0915 depth_threshold: float, adinos_threshold: float = 0.1, correction_threshold: int = 3, - fluo_bl_threshold: float = 0.4, + fluo_bl_threshold: float = 0.2, corr_type: str = "pearson", # "spearman" or "pearson" minutes_from_surface_threshold: int = 5, ) -> None: From 48fd684f1528034fff25ff8882f9b053ddec8bb7 Mon Sep 17 00:00:00 2001 From: Mike McCann Date: Wed, 23 Jul 2025 08:33:39 -0700 Subject: [PATCH 2/2] Adjust EXPECTED_SIZE_GITHUB. --- src/data/test_process_i2map.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/data/test_process_i2map.py b/src/data/test_process_i2map.py index 1f2bba50..cbd2c2c3 100644 --- a/src/data/test_process_i2map.py +++ b/src/data/test_process_i2map.py @@ -30,7 +30,7 @@ def test_process_i2map(complete_i2map_processing): # but it will alert us if a code change unexpectedly changes the file size. # If code changes are expected to change the file size then we should # update the expected size here. - EXPECTED_SIZE_GITHUB = 58836 + EXPECTED_SIZE_GITHUB = 58839 EXPECTED_SIZE_ACT = 58816 EXPECTED_SIZE_LOCAL = 58884 if str(proc.args.base_path).startswith("/home/runner"):