README.md

autoMS

LC-MS tool for fast, automated mzML preprocessing in untargeted metabolomics analysis.

Install and launch

git clone https://github.com/michael-jopiti/autoMS.git
echo "alias autoMS='python3 $PWD/autoMS/main.py'" >> ~/.bashrc
source ~/.bashrc
autoMS -h

Simple launch with basic summary of (each) files(s)

autoMS -i path/to/file(s).mzML -o path/to/output -sum

Affiliation

This project is affiliated with EMI and DBGI.