From a60e88a5a35e67e9eeb31eda20a94b0c55aa2607 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Tue, 13 Jan 2026 02:17:33 -0800
Subject: [PATCH 01/18] initial work on iter method, need to split deinit from
 stop - iterators are ending and that shouldn't break running lol.

---
 src/noob/network/message.py        |  12 +++-
 src/noob/runner/zmq.py             | 104 ++++++++++++++++++++++++++---
 tests/test_pipelines/test_basic.py |   9 +--
 3 files changed, 111 insertions(+), 14 deletions(-)

diff --git a/src/noob/network/message.py b/src/noob/network/message.py
index 420047ee..535fab42 100644
--- a/src/noob/network/message.py
+++ b/src/noob/network/message.py
@@ -33,6 +33,7 @@ class MessageType(StrEnum):
     announce = "announce"
     identify = "identify"
     process = "process"
+    init = "init"
     start = "start"
     status = "status"
     stop = "stop"
@@ -119,13 +120,19 @@ class ProcessMsg(Message):
     """Any process-scoped input passed to the `process` call"""
 
 
+class InitMsg(Message):
+    """Initialize nodes within node runners"""
+
+    type_: Literal[MessageType.init] = Field(MessageType.init, alias="type")
+    value: None = None
+
+
 class StartMsg(Message):
-    """Start free running nodes"""
+    """Start free-running nodes"""
 
     type_: Literal[MessageType.start] = Field(MessageType.start, alias="type")
     value: None = None
 
-
 class StatusMsg(Message):
     """Node updating its current status"""
 
@@ -196,6 +203,7 @@ def _type_discriminator(v: dict | Message) -> str:
     A[AnnounceMsg, Tag("announce")]
     | A[IdentifyMsg, Tag("identify")]
     | A[ProcessMsg, Tag("process")]
+    | A[InitMsg, Tag("init")]
     | A[StartMsg, Tag("start")]
     | A[StatusMsg, Tag("status")]
     | A[StopMsg, Tag("stop")]
diff --git a/src/noob/runner/zmq.py b/src/noob/runner/zmq.py
index b54d2564..00aa30c2 100644
--- a/src/noob/runner/zmq.py
+++ b/src/noob/runner/zmq.py
@@ -64,6 +64,7 @@
     MessageType,
     NodeStatus,
     ProcessMsg,
+    StartMsg,
     StatusMsg,
     StopMsg,
 )
@@ -131,7 +132,7 @@ def router_address(self) -> str:
         else:
             raise NotImplementedError()
 
-    def start(self) -> None:
+    def init(self) -> None:
         self.logger.debug("Starting command runner")
         self.start_loop()
         self._init_sockets()
@@ -181,6 +182,13 @@ def announce(self) -> None:
         )
         self._outbox.send_multipart([b"announce", msg.to_bytes()])
 
+    def start(self) -> None:
+        """
+        Start running in free-run mode
+        """
+        self._outbox.send_multipart([b"start", StartMsg(node_id="command").to_bytes()])
+        self.logger.debug("Sent start message")
+
     def process(self, epoch: int, input: dict | None = None) -> None:
         """Emit a ProcessMsg to process a single round through the graph"""
         # no empty dicts
@@ -560,6 +568,9 @@ def on_inbox(self, msg: list[bytes]) -> None:
         elif message.type_ == MessageType.process:
             message = cast(ProcessMsg, message)
             self.on_process(message)
+        elif message.type_ == MessageType.start:
+            message = cast(StartMsg, message)
+            self.on_start(message)
         elif message.type_ == MessageType.stop:
             message = cast(StopMsg, message)
             self.on_stop(message)
@@ -604,6 +615,13 @@ def on_event(self, msg: EventMsg) -> None:
 
         self.scheduler.update(events)
 
+    def on_start(self, msg: StartMsg) -> None:
+        """
+        Start running in free mode
+        """
+        self._freerun.set()
+        self._process_one.set()
+
     def on_process(self, msg: ProcessMsg) -> None:
         """
         Process a single graph iteration
@@ -674,17 +692,24 @@ class ZMQRunner(TubeRunner):
     """time in seconds to wait after calling deinit to wait before killing runner processes"""
     store: EventStore = field(default_factory=EventStore)
 
+    _initialized: EventType = field(default_factory=mp.Event)
     _running: EventType = field(default_factory=mp.Event)
-    _return_node: Return | None = None
     _init_lock: threading.Lock = field(default_factory=threading.Lock)
+    _running_lock: threading.Lock = field(default_factory=threading.Lock)
+    _return_node: Return | None = None
     _to_throw: ErrorValue | None = None
     _current_epoch: int | None = None
 
     @property
     def running(self) -> bool:
-        with self._init_lock:
+        with self._running_lock:
             return self._running.is_set()
 
+    @property
+    def initialized(self) -> bool:
+        with self._init_lock:
+            return self._initialized.is_set()
+
     def init(self) -> None:
         if self.running:
             return
@@ -693,7 +718,7 @@ def init(self) -> None:
             self.command = CommandNode(runner_id=self.runner_id)
             self.command.add_callback("inbox", self.on_event)
             self.command.add_callback("router", self.on_router)
-            self.command.start()
+            self.command.init()
             self._logger.debug("Command node initialized")
 
             for node_id, node in self.tube.nodes.items():
@@ -718,10 +743,10 @@ def init(self) -> None:
                 [k for k, v in self.tube.nodes.items() if not isinstance(v, Return)]
             )
             self._logger.debug("Nodes ready")
-            self._running.set()
+            self._initialized.set()
 
     def deinit(self) -> None:
-        if not self.running:
+        if not self.initialized:
             return
 
         with self._init_lock:
@@ -746,12 +771,16 @@ def deinit(self) -> None:
                 proc.close()
             self.command.clear_callbacks()
             self.tube.scheduler.clear()
-            self._running.clear()
+            self._initialized.clear()
 
     def process(self, **kwargs: Any) -> ReturnNodeType:
-        if not self.running:
+        if not self.initialized:
             self._logger.info("Runner called process without calling `init`, initializing now.")
             self.init()
+        if self.running:
+            raise RuntimeError(
+                "Runner is already running in free run mode! use iter to gather results"
+            )
         input = self.tube.input_collection.validate_input(InputScope.process, kwargs)
 
         self._current_epoch = self.tube.scheduler.add_epoch()
@@ -768,6 +797,65 @@ def process(self, **kwargs: Any) -> ReturnNodeType:
         self._logger.debug("collecting return")
         return self.collect_return(self._current_epoch)
 
+    def iter(self, n: int | None = None) -> Generator[ReturnNodeType, None, None]:
+        """
+        Iterate over results as they are available.
+
+        Tube runs in free-run mode for n iterations,
+        This method is usually only useful for tubes with :class:`.Return` nodes.
+        This method yields only when return is available:
+        the tube will run more than n ``process`` calls if there are e.g. gather nodes
+        that cause the return value to be empty.
+
+        To call the tube a specific number of times and do something with the events
+        other than returning a value, use callbacks and :meth:`.run` !
+
+        Note that backpressure control is not yet implemented!!!
+        If the outer iter method is slow, or there is a bottleneck in your tube,
+        you might incur some serious memory usage!
+        Backpressure and observability is a WIP!
+
+        If you need a version of this method that *always* makes a fixed number of process calls,
+        raise an issue!
+        """
+        if not self.initialized:
+            raise RuntimeError(
+                "ZMQRunner must be explicitly initialized and deinitialized, "
+                "use the runner as a contextmanager or call `init()` and `deinit()`"
+            )
+        # TODO: after #125 is merged, raise error if tube required process scoped inputs
+        if self.running:
+            raise RuntimeError("Already Running!")
+
+        epoch = self._current_epoch
+        # start running without a limit - we'll check as we go.
+        self.command.start()
+        self._running.set()
+        current_iter = 0
+        try:
+            while n is None or current_iter < n:
+                ret = None
+                loop = 0
+                while ret is None:
+                    self._logger.debug("Awaiting epoch %s", epoch)
+                    self.tube.scheduler.await_epoch(epoch)
+                    epoch += 1
+                    ret = self.collect_return(epoch)
+                    if ret:
+                        self._logger.debug("Returning value from epoch %s", epoch)
+                    else:
+                        self._logger.debug("No return value for %s", epoch)
+                    if loop > self.max_iter_loops:
+                        raise RuntimeError("Reached maximum process calls per iteration")
+
+                yield ret
+                current_iter += 1
+
+        finally:
+            # FIXME: Separate stopping and deinit so we can pause running more cheaply.
+            self._running.clear()
+            self.deinit()
+
     def on_event(self, msg: Message) -> None:
         self._logger.debug("EVENT received: %s", msg)
         if msg.type_ != MessageType.event:
diff --git a/tests/test_pipelines/test_basic.py b/tests/test_pipelines/test_basic.py
index 4a8219ba..d74cbb77 100644
--- a/tests/test_pipelines/test_basic.py
+++ b/tests/test_pipelines/test_basic.py
@@ -102,7 +102,8 @@ def test_multi_signal(loaded_tube: Tube, sync_runner_cls):
     tube = Tube.from_specification("testing-multi-signal")
     runner = sync_runner_cls(tube)
 
-    for value in runner.iter(n=5):
-        assert isinstance(value, dict)
-        assert isinstance(value["word"], str)
-        assert value["count_sum"] == sum(value["counts"])
+    with runner:
+        for value in runner.iter(n=5):
+            assert isinstance(value, dict)
+            assert isinstance(value["word"], str)
+            assert value["count_sum"] == sum(value["counts"])

From 8b5c653bdc222cd72698275543d59da2eb26235b Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Thu, 15 Jan 2026 23:46:58 -0800
Subject: [PATCH 02/18] run and iter methods

---
 src/noob/network/message.py        |  12 +-
 src/noob/runner/base.py            |  15 ++-
 src/noob/runner/zmq.py             | 197 +++++++++++++++++++++++------
 src/noob/scheduler.py              |   6 +-
 src/noob/store.py                  |   8 ++
 src/noob/testing/nodes.py          |   2 +-
 tests/test_pipelines/test_basic.py |   2 +-
 tests/test_runners/test_zmq.py     |  94 ++++++++++++++
 tests/test_scheduler.py            |   4 +-
 tests/test_store.py                |  10 ++
 10 files changed, 304 insertions(+), 46 deletions(-)

diff --git a/src/noob/network/message.py b/src/noob/network/message.py
index 535fab42..c603b594 100644
--- a/src/noob/network/message.py
+++ b/src/noob/network/message.py
@@ -34,6 +34,7 @@ class MessageType(StrEnum):
     identify = "identify"
     process = "process"
     init = "init"
+    deinit = "deinit"
     start = "start"
     status = "status"
     stop = "stop"
@@ -127,11 +128,19 @@ class InitMsg(Message):
     value: None = None
 
 
+class DeinitMsg(Message):
+    """Deinitializes nodes within node runners"""
+
+    type_: Literal[MessageType.deinit] = Field(MessageType.deinit, alias="type")
+    value: None = None
+
+
 class StartMsg(Message):
     """Start free-running nodes"""
 
     type_: Literal[MessageType.start] = Field(MessageType.start, alias="type")
-    value: None = None
+    value: int | None = None
+
 
 class StatusMsg(Message):
     """Node updating its current status"""
@@ -204,6 +213,7 @@ def _type_discriminator(v: dict | Message) -> str:
     | A[IdentifyMsg, Tag("identify")]
     | A[ProcessMsg, Tag("process")]
     | A[InitMsg, Tag("init")]
+    | A[DeinitMsg, Tag("deinit")]
     | A[StartMsg, Tag("start")]
     | A[StatusMsg, Tag("status")]
     | A[StopMsg, Tag("stop")]
diff --git a/src/noob/runner/base.py b/src/noob/runner/base.py
index a84bdcf0..49b5bb37 100644
--- a/src/noob/runner/base.py
+++ b/src/noob/runner/base.py
@@ -13,7 +13,7 @@
 from datetime import UTC, datetime
 from functools import partial
 from logging import Logger
-from typing import TYPE_CHECKING, Any, ParamSpec, Self, TypeVar
+from typing import TYPE_CHECKING, Any, ParamSpec, Self, TypeVar, overload
 
 from noob import Tube, init_logger
 from noob.asset import AssetScope
@@ -180,7 +180,20 @@ def iter(self, n: int | None = None) -> Generator[ReturnNodeType, None, None]:
         finally:
             self.deinit()
 
+    @overload
+    def run(self, n: int) -> list[ReturnNodeType]: ...
+
+    @overload
+    def run(self, n: None) -> None: ...
+
     def run(self, n: int | None = None) -> None | list[ReturnNodeType]:
+        """
+        Run the tube infinitely or for a fixed number of iterations in a row.
+
+        Returns results if ``n`` is not ``None`` -
+        If ``n`` is ``None`` , we assume we are going to be running for a very long time,
+        and don't want to have an infinitely-growing collection in memory.
+        """
         try:
             _ = self.tube.input_collection.validate_input(InputScope.process, {})
         except InputMissingError as e:
diff --git a/src/noob/runner/zmq.py b/src/noob/runner/zmq.py
index 00aa30c2..13226fe2 100644
--- a/src/noob/runner/zmq.py
+++ b/src/noob/runner/zmq.py
@@ -22,6 +22,7 @@
 
 """
 
+import math
 import multiprocessing as mp
 import os
 import signal
@@ -34,7 +35,7 @@
 from multiprocessing.synchronize import Event as EventType
 from time import time
 from types import FrameType
-from typing import TYPE_CHECKING, Any, Literal, cast
+from typing import TYPE_CHECKING, Any, Literal, cast, overload
 
 from noob.network.loop import EventloopMixin
 
@@ -49,12 +50,14 @@
 from zmq.eventloop.zmqstream import ZMQStream
 
 from noob.config import config
-from noob.event import Event
+from noob.event import Event, MetaSignal
+from noob.exceptions import InputMissingError
 from noob.input import InputCollection, InputScope
 from noob.logging import init_logger
 from noob.network.message import (
     AnnounceMsg,
     AnnounceValue,
+    DeinitMsg,
     ErrorMsg,
     ErrorValue,
     EventMsg,
@@ -138,11 +141,18 @@ def init(self) -> None:
         self._init_sockets()
         self.logger.debug("Command runner started")
 
+    def deinit(self) -> None:
+        """Close the eventloop, stop processing messages, reset state"""
+        self.logger.debug("Deinitializing")
+        msg = DeinitMsg(node_id="command")
+        self._outbox.send_multipart([b"deinit", msg.to_bytes()])
+        self.stop_loop()
+        self.logger.debug("Deinitialized")
+
     def stop(self) -> None:
         self.logger.debug("Stopping command runner")
         msg = StopMsg(node_id="command")
         self._outbox.send_multipart([b"stop", msg.to_bytes()])
-        self.stop_loop()
         self.logger.debug("Command runner stopped")
 
     def _init_sockets(self) -> None:
@@ -182,11 +192,11 @@ def announce(self) -> None:
         )
         self._outbox.send_multipart([b"announce", msg.to_bytes()])
 
-    def start(self) -> None:
+    def start(self, n: int | None = None) -> None:
         """
         Start running in free-run mode
         """
-        self._outbox.send_multipart([b"start", StartMsg(node_id="command").to_bytes()])
+        self._outbox.send_multipart([b"start", StartMsg(node_id="command", value=n).to_bytes()])
         self.logger.debug("Sent start message")
 
     def process(self, epoch: int, input: dict | None = None) -> None:
@@ -375,6 +385,7 @@ def run(cls, spec: NodeSpecification, **kwargs: Any) -> None:
         try:
 
             def _handler(sig: int, frame: FrameType | None = None) -> None:
+                signal.signal(signal.SIGTERM, signal.SIG_DFL)
                 raise KeyboardInterrupt()
 
             signal.signal(signal.SIGTERM, _handler)
@@ -574,6 +585,9 @@ def on_inbox(self, msg: list[bytes]) -> None:
         elif message.type_ == MessageType.stop:
             message = cast(StopMsg, message)
             self.on_stop(message)
+        elif message.type_ == MessageType.deinit:
+            message = cast(DeinitMsg, message)
+            self.on_deinit(message)
         else:
             # log but don't throw - other nodes shouldn't be able to crash us
             self.logger.error(f"{message.type_} not implemented!")
@@ -619,7 +633,10 @@ def on_start(self, msg: StartMsg) -> None:
         """
         Start running in free mode
         """
-        self._freerun.set()
+        if msg.value is None:
+            self._freerun.set()
+        else:
+            self._to_process += msg.value
         self._process_one.set()
 
     def on_process(self, msg: ProcessMsg) -> None:
@@ -654,7 +671,19 @@ def on_process(self, msg: ProcessMsg) -> None:
         self._process_one.set()
 
     def on_stop(self, msg: StopMsg) -> None:
-        """Stop processing!"""
+        """Stop processing (but stay responsive)"""
+        self._process_one.clear()
+        self._to_process = 0
+        self._freerun.clear()
+        self.update_status(NodeStatus.stopped)
+        self.logger.debug("Stopped")
+
+    def on_deinit(self, msg: DeinitMsg) -> None:
+        """
+        Deinitialize the node, close networking thread.
+
+        Cause the main loop to end, which calls deinit
+        """
         self._process_quitting.set()
         pid = mp.current_process().pid
         if pid is None:
@@ -698,7 +727,7 @@ class ZMQRunner(TubeRunner):
     _running_lock: threading.Lock = field(default_factory=threading.Lock)
     _return_node: Return | None = None
     _to_throw: ErrorValue | None = None
-    _current_epoch: int | None = None
+    _current_epoch: int = 0
 
     @property
     def running(self) -> bool:
@@ -768,8 +797,15 @@ def deinit(self) -> None:
                     f"NodeRunner {proc.name} was still alive after timeout expired, killing it"
                 )
                 proc.kill()
-                proc.close()
+                try:
+                    proc.close()
+                except ValueError:
+                    self._logger.info(
+                        f"NodeRunner {proc.name} still not closed! making an unclean exit."
+                    )
+
             self.command.clear_callbacks()
+            self.command.deinit()
             self.tube.scheduler.clear()
             self._initialized.clear()
 
@@ -782,20 +818,25 @@ def process(self, **kwargs: Any) -> ReturnNodeType:
                 "Runner is already running in free run mode! use iter to gather results"
             )
         input = self.tube.input_collection.validate_input(InputScope.process, kwargs)
-
-        self._current_epoch = self.tube.scheduler.add_epoch()
-        # we want to mark 'input' as done if it's in the topo graph,
-        # but input can be present and only used as a param, so we can't check presence of inputs
-        if "input" in self.tube.scheduler._epochs[self._current_epoch].ready_nodes:
-            self.tube.scheduler.done(self._current_epoch, "input")
-        self.command = cast(CommandNode, self.command)
-        self.command.process(self._current_epoch, input)
-        self._logger.debug("awaiting epoch %s", self._current_epoch)
-        self.tube.scheduler.await_epoch(self._current_epoch)
-        if self._to_throw:
-            self._throw_error()
-        self._logger.debug("collecting return")
-        return self.collect_return(self._current_epoch)
+        self._running.set()
+        try:
+            self._current_epoch = self.tube.scheduler.add_epoch()
+            # we want to mark 'input' as done if it's in the topo graph,
+            # but input can be present and only used as a param,
+            # so we can't check presence of inputs in the input collection
+            if "input" in self.tube.scheduler._epochs[self._current_epoch].ready_nodes:
+                self.tube.scheduler.done(self._current_epoch, "input")
+            self.command = cast(CommandNode, self.command)
+            self.command.process(self._current_epoch, input)
+            self._logger.debug("awaiting epoch %s", self._current_epoch)
+            self.tube.scheduler.await_epoch(self._current_epoch)
+            if self._to_throw:
+                self._throw_error()
+            self._logger.debug("collecting return")
+
+            return self.collect_return(self._current_epoch)
+        finally:
+            self._running.clear()
 
     def iter(self, n: int | None = None) -> Generator[ReturnNodeType, None, None]:
         """
@@ -823,38 +864,115 @@ def iter(self, n: int | None = None) -> Generator[ReturnNodeType, None, None]:
                 "ZMQRunner must be explicitly initialized and deinitialized, "
                 "use the runner as a contextmanager or call `init()` and `deinit()`"
             )
-        # TODO: after #125 is merged, raise error if tube required process scoped inputs
+        try:
+            _ = self.tube.input_collection.validate_input(InputScope.process, {})
+        except InputMissingError as e:
+            raise InputMissingError(
+                "Can't use the `iter` method with tubes with process-scoped input "
+                "that was not provided when instantiating the tube! "
+                "Use `process()` directly, providing required inputs to each call."
+            ) from e
         if self.running:
             raise RuntimeError("Already Running!")
+        self.command = cast(CommandNode, self.command)
 
         epoch = self._current_epoch
+        start_epoch = epoch
+        stop_epoch = epoch + n if n is not None else epoch
         # start running without a limit - we'll check as we go.
-        self.command.start()
+        self.command.start(n)
         self._running.set()
         current_iter = 0
         try:
             while n is None or current_iter < n:
-                ret = None
+                ret = MetaSignal.NoEvent
                 loop = 0
-                while ret is None:
+                while ret is MetaSignal.NoEvent:
                     self._logger.debug("Awaiting epoch %s", epoch)
                     self.tube.scheduler.await_epoch(epoch)
-                    epoch += 1
                     ret = self.collect_return(epoch)
-                    if ret:
-                        self._logger.debug("Returning value from epoch %s", epoch)
-                    else:
-                        self._logger.debug("No return value for %s", epoch)
+                    self.store.clear(epoch)
+                    epoch += 1
+                    self._current_epoch = epoch
                     if loop > self.max_iter_loops:
                         raise RuntimeError("Reached maximum process calls per iteration")
-
-                yield ret
+                    # if we have run out of epochs to run, request some more with a cheap heuristic
+                    if n is not None and epoch >= stop_epoch:
+                        # if we get one return value every 5 epochs,
+                        # and we ran 5 epochs to get 1 result,
+                        # then we need to run 20 more to get the other 4,
+                        # or, (n remaining) * (epochs per result)
+                        # so...
+                        divisor = current_iter if current_iter > 0 else 1
+                        get_more = (n - current_iter) * math.ceil(
+                            (stop_epoch - start_epoch) / divisor
+                        )
+                        stop_epoch += get_more
+                        self.command.start(get_more)
+
+                # stop here in case we don't exhaust the iterator
+                if n is not None and current_iter >= n:
+                    self.command.stop()
                 current_iter += 1
+                yield ret
 
         finally:
-            # FIXME: Separate stopping and deinit so we can pause running more cheaply.
-            self._running.clear()
-            self.deinit()
+            self.stop()
+
+    @overload
+    def run(self, n: int) -> list[ReturnNodeType]: ...
+
+    @overload
+    def run(self, n: None = None) -> None: ...
+
+    def run(self, n: int | None = None) -> None | list[ReturnNodeType]:
+        """
+        Run the tube in freerun mode - every node runs as soon as its dependencies are satisfied,
+        not waiting for epochs to complete before starting the next epoch.
+
+        Blocks when ``n`` is not None -
+        This is for consistency with the synchronous/asyncio runners,
+        but may change in the future.
+
+        If ``n`` is None, does not block.
+        stop processing by calling :meth:`.stop` or deinitializing
+        (exiting the contextmanager, or calling :meth:`.deinit`)
+        """
+        if not self.initialized:
+            raise RuntimeError(
+                "ZMQRunner must be explicitly initialized and deinitialized, "
+                "use the runner as a contextmanager or call `init()` and `deinit()`"
+            )
+        if self.running:
+            raise RuntimeError("Already Running!")
+        try:
+            _ = self.tube.input_collection.validate_input(InputScope.process, {})
+        except InputMissingError as e:
+            raise InputMissingError(
+                "Can't use the `iter` method with tubes with process-scoped input "
+                "that was not provided when instantiating the tube! "
+                "Use `process()` directly, providing required inputs to each call."
+            ) from e
+        self.command = cast(CommandNode, self.command)
+
+        if n is None:
+            self.command.start()
+            self._running.set()
+            return None
+
+        else:
+            results = []
+            for res in self.iter(n):
+                results.append(res)
+            return results
+
+    def stop(self) -> None:
+        """
+        Stop running the tube.
+        """
+        self.command = cast(CommandNode, self.command)
+        self.command.stop()
+        self._running.clear()
 
     def on_event(self, msg: Message) -> None:
         self._logger.debug("EVENT received: %s", msg)
@@ -891,10 +1009,11 @@ def collect_return(self, epoch: int | None = None) -> Any:
         else:
             events = self.store.collect(self._return_node.edges, epoch)
             if events is None:
-                return None
+                return MetaSignal.NoEvent
             args, kwargs = self.store.split_args_kwargs(events)
             self._return_node.process(*args, **kwargs)
-            return self._return_node.get(keep=False)
+            ret = self._return_node.get(keep=False)
+            return ret
 
     def _handle_error(self, msg: ErrorMsg) -> None:
         """Cancel current epoch, stash error for process method to throw"""
diff --git a/src/noob/scheduler.py b/src/noob/scheduler.py
index 5bf26236..8c2efffa 100644
--- a/src/noob/scheduler.py
+++ b/src/noob/scheduler.py
@@ -66,7 +66,7 @@ def add_epoch(self, epoch: int | None = None) -> int:
         Add another epoch with a prepared graph to the scheduler.
         """
         with self._ready_condition:
-            if epoch:
+            if epoch is not None:
                 this_epoch = epoch
                 # ensure that the next iteration of the clock will return the next number
                 # if we create epochs out of order
@@ -316,7 +316,9 @@ def epoch_completed(self, epoch: int) -> bool:
         """
         with self._epoch_condition:
             previously_completed = (
-                len(self._epoch_log) > 0 and epoch not in self._epochs and epoch in self._epoch_log
+                len(self._epoch_log) > 0
+                and epoch not in self._epochs
+                and (epoch in self._epoch_log or epoch < min(self._epoch_log))
             )
             active_completed = epoch in self._epochs and not self._epochs[epoch].is_active()
             return previously_completed or active_completed
diff --git a/src/noob/store.py b/src/noob/store.py
index 56aa6595..37f9473e 100644
--- a/src/noob/store.py
+++ b/src/noob/store.py
@@ -3,6 +3,7 @@
 """
 
 from collections import defaultdict
+from collections.abc import Generator
 from dataclasses import dataclass, field
 from datetime import UTC, datetime
 from itertools import count
@@ -231,3 +232,10 @@ def split_args_kwargs(inputs: dict) -> tuple[tuple, dict]:
         # cast to tuple since `*args` is a tuple
         args_tuple = tuple(item[1] for item in sorted(args, key=lambda x: x[0]))
         return args_tuple, kwargs
+
+    def iter(self) -> Generator[Event, None, None]:
+        """Iterate through all events"""
+        for nodes in self.events.values():
+            for signals in nodes.values():
+                for events in signals.values():
+                    yield from events
diff --git a/src/noob/testing/nodes.py b/src/noob/testing/nodes.py
index b24962b2..9c9e6cad 100644
--- a/src/noob/testing/nodes.py
+++ b/src/noob/testing/nodes.py
@@ -157,7 +157,7 @@ def input_party(
 
 
 def long_add(value: float) -> float:
-    sleep(0.5)
+    sleep(0.25)
     return value + 1
 
 
diff --git a/tests/test_pipelines/test_basic.py b/tests/test_pipelines/test_basic.py
index d74cbb77..b2a93932 100644
--- a/tests/test_pipelines/test_basic.py
+++ b/tests/test_pipelines/test_basic.py
@@ -15,7 +15,7 @@ def test_basic_process(loaded_tube: Tube, runner: TubeRunner):
 
 
 @pytest.mark.parametrize("loaded_tube", ["testing-basic"], indirect=True)
-def test_basic(loaded_tube: Tube, runner: TubeRunner):
+def test_basic_run(loaded_tube: Tube, runner: TubeRunner):
     """The most basic tube! We can process a fixed number of events"""
     outputs = runner.run(n=5)
     assert len(outputs) == 5
diff --git a/tests/test_runners/test_zmq.py b/tests/test_runners/test_zmq.py
index 5606e847..c42cf1a7 100644
--- a/tests/test_runners/test_zmq.py
+++ b/tests/test_runners/test_zmq.py
@@ -191,3 +191,97 @@ def _event_cb(event: Message) -> None:
     assert runner.store.events[2]["a"]["value"][0]["value"] == 7 * 2
     assert runner.store.events[2]["b"]["value"][0]["value"] == 7
     assert runner.store.events[2]["d"]["value"][0]["value"] == 7 * 3 * 3
+
+
+@pytest.mark.asyncio
+async def test_run_freeruns():
+    """
+    When `run` is called, the zmq runner should "freerun" -
+    allow nodes to execute as quickly as they can, whenever their deps are satisfied.
+    """
+    tube = Tube.from_specification("testing-long-add")
+    runner = ZMQRunner(tube)
+
+    # events = []
+    #
+    # def _event_cb(event: Message) -> None:
+    #     nonlocal events
+    #     events.append(event)
+
+    with runner:
+        runner.run()
+        assert runner.running
+        await sleep(0.5)
+        runner.stop()
+
+    # main thing we're testing here is whether we freerun -
+    # i.e. that nodes don't wait for an epoch to complete before running, if they're ready.
+    # so we should have way more events from the source node than from the long_add nodes,
+    # which sleep and take a long time on purpose.
+    # since there are way more long_add nodes than the single count node,
+    # if we ran epoch by epoch, we would expect there to be more non-count events.
+    count_events = []
+    non_count_events = []
+    for event in runner.store.iter():
+        if event["node_id"] == "count":
+            count_events.append(event)
+        else:
+            non_count_events.append(event)
+
+    assert len(count_events) > 0
+    assert len(non_count_events) > 0
+    assert len(count_events) > len(non_count_events)
+    # we should theoretically get only 2 epochs from the long add nodes,
+    # but allow up to 5 in the case of network latency, this is not that important
+    assert len(set(e["epoch"] for e in non_count_events)) < 5
+    # it should be in the hundreds, but all we care about is that it's more than 1 greater
+    # 10 is a good number.
+    assert len(set(e["epoch"] for e in count_events)) > 10
+
+
+@pytest.mark.xfail()
+def test_start_stop():
+    """
+    The runner can be started and stopped without deinitializing
+    """
+    raise NotImplementedError()
+
+
+@pytest.mark.xfail()
+def test_iter_gather():
+    """
+    itering over gather should heuristically request more iterations as we go
+    """
+    raise NotImplementedError()
+
+
+@pytest.mark.xfail()
+def test_noderunner_stores_clear():
+    """
+    Stores in the noderunners should clear after they use the events from an epoch
+    """
+    raise NotImplementedError()
+
+
+@pytest.mark.xfail()
+def test_zmqrunner_stores_clear_process():
+    """
+    ZMQRunner stores clear after returning values from process
+    """
+    raise NotImplementedError()
+
+
+@pytest.mark.xfail()
+def test_zmqrunner_stores_clear_iter():
+    """
+    ZMQRunner stores clear after returning values while iterating
+    """
+    raise NotImplementedError()
+
+
+@pytest.mark.xfail()
+def test_zmqrunner_stores_clear_freerun():
+    """
+    ZMQRunner doesn't store events while freerunning.
+    """
+    raise NotImplementedError()
diff --git a/tests/test_scheduler.py b/tests/test_scheduler.py
index 407b6a65..c839f31e 100644
--- a/tests/test_scheduler.py
+++ b/tests/test_scheduler.py
@@ -6,6 +6,7 @@
 
 from noob import SynchronousRunner, Tube
 from noob.event import Event, MetaEventType
+from noob.exceptions import EpochCompletedError
 from noob.toposort import TopoSorter
 
 
@@ -178,8 +179,9 @@ def test_clear_ended_epochs():
             assert len(scheduler._epochs) == 2
         else:
             assert scheduler[1]
-            with pytest.raises(KeyError):
+            with pytest.raises(EpochCompletedError):
                 _ = scheduler[0]
+            assert len(scheduler._epochs) == 1
 
 
 @pytest.mark.xfail(raises=Empty)
diff --git a/tests/test_store.py b/tests/test_store.py
index 5c78c466..d806e1ba 100644
--- a/tests/test_store.py
+++ b/tests/test_store.py
@@ -1,5 +1,7 @@
 from datetime import UTC, datetime
 
+import pytest
+
 from noob.event import Event
 from noob.store import EventStore
 
@@ -22,3 +24,11 @@ def test_store_get_by_epoch():
     event = store.get(node_id="a", signal="b", epoch=-1)
     assert event
     assert event["epoch"] == 4
+
+
+@pytest.mark.xfail()
+def test_store_iter():
+    """
+    Store can iterate over all events in its nested dictionary
+    """
+    raise NotImplementedError()

From 60e0fb6bff78eb559ef8389e9dc80674f65e2e85 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Thu, 22 Jan 2026 18:51:06 -0800
Subject: [PATCH 03/18] deconflict logging handlers between processes

---
 src/noob/logging.py | 65 ++++++++++++++++++++++++---------------------
 1 file changed, 35 insertions(+), 30 deletions(-)

diff --git a/src/noob/logging.py b/src/noob/logging.py
index 98d17016..1eb33f65 100644
--- a/src/noob/logging.py
+++ b/src/noob/logging.py
@@ -8,7 +8,7 @@
 from pathlib import Path
 from typing import Any, Literal
 
-from rich import get_console
+from rich.console import Console
 from rich.logging import RichHandler
 
 from noob.config import LOG_LEVELS, config
@@ -85,30 +85,6 @@ def init_logger(
     logger = logging.getLogger(name)
     logger.setLevel(min_level)
 
-    # if run from a forked process, need to add different handlers to not collide
-    if mp.parent_process() is not None:
-        handler_name = f"{name}_{mp.current_process().pid}"
-        if log_dir is not False and not any([h.name == handler_name for h in logger.handlers]):
-            logger.addHandler(
-                _file_handler(
-                    name=f"{name}_{mp.current_process().pid}",
-                    file_level=file_level,
-                    log_dir=log_dir,
-                    log_file_n=log_file_n,
-                    log_file_size=log_file_size,
-                )
-            )
-
-        if not any(
-            [
-                handler_name in h.keywords
-                for h in logger.handlers
-                if isinstance(h, RichHandler) and h.keywords is not None
-            ]
-        ):
-            logger.addHandler(_rich_handler(level, keywords=[handler_name], width=width))
-        logger.propagate = False
-
     return logger
 
 
@@ -121,6 +97,18 @@ def _init_root(
     width: int | None = None,
 ) -> None:
     root_logger = logging.getLogger("noob")
+
+    # ensure each root logger has fresh handlers in subprocesses
+    if mp.parent_process() is not None:
+        current_pid = mp.current_process().pid
+        file_name = f"noob_{current_pid}"
+        rich_name = f"{file_name}_rich"
+    else:
+        file_name = "noob"
+        rich_name = "noob_rich"
+
+    root_logger.handlers = [h for h in root_logger.handlers if h.name in (rich_name, file_name)]
+
     file_handlers = [
         handler for handler in root_logger.handlers if isinstance(handler, RotatingFileHandler)
     ]
@@ -131,7 +119,7 @@ def _init_root(
     if log_dir is not False and not file_handlers:
         root_logger.addHandler(
             _file_handler(
-                "noob",
+                file_name,
                 file_level,
                 log_dir,
                 log_file_n,
@@ -143,7 +131,7 @@ def _init_root(
             file_handler.setLevel(file_level)
 
     if not stream_handlers:
-        root_logger.addHandler(_rich_handler(stdout_level, width=width))
+        root_logger.addHandler(_rich_handler(stdout_level, name=rich_name, width=width))
     else:
         for stream_handler in stream_handlers:
             stream_handler.setLevel(stdout_level)
@@ -165,18 +153,22 @@ def _file_handler(
     file_handler = RotatingFileHandler(
         str(filename), mode="a", maxBytes=log_file_size, backupCount=log_file_n
     )
+    file_handler._pid = mp.current_process().pid
     file_formatter = logging.Formatter("[%(asctime)s] %(levelname)s [%(name)s]: %(message)s")
     file_handler.setLevel(file_level)
     file_handler.setFormatter(file_formatter)
     return file_handler
 
 
-def _rich_handler(level: LOG_LEVELS, width: int | None = None, **kwargs: Any) -> RichHandler:
-    console = get_console()
+def _rich_handler(
+    level: LOG_LEVELS, name: str, width: int | None = None, **kwargs: Any
+) -> RichHandler:
+    console = _get_console()
     if width:
         console.width = width
 
-    rich_handler = RichHandler(rich_tracebacks=True, markup=True, **kwargs)
+    rich_handler = RichHandler(console=console, rich_tracebacks=True, markup=True, **kwargs)
+    rich_handler.name = name
     rich_formatter = logging.Formatter(
         r"[bold green]\[%(name)s][/bold green] %(message)s",
         datefmt="[%y-%m-%dT%H:%M:%S]",
@@ -184,3 +176,16 @@ def _rich_handler(level: LOG_LEVELS, width: int | None = None, **kwargs: Any) ->
     rich_handler.setFormatter(rich_formatter)
     rich_handler.setLevel(level)
     return rich_handler
+
+
+_console_by_pid: dict[int, Console] = {}
+
+
+def _get_console() -> Console:
+    """get a console that was spawned in this process"""
+    global _console_by_pid
+    current_pid = mp.current_process().pid
+    console = _console_by_pid.get(current_pid)
+    if console is None:
+        _console_by_pid[current_pid] = console = Console()
+    return console

From 39e80683978b8f8538d7b88f05deef39d9191388 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Thu, 22 Jan 2026 19:21:18 -0800
Subject: [PATCH 04/18] ping for status and timeout

---
 src/noob/network/message.py |  8 ++++++
 src/noob/runner/zmq.py      | 53 ++++++++++++++++++++++++++-----------
 2 files changed, 45 insertions(+), 16 deletions(-)

diff --git a/src/noob/network/message.py b/src/noob/network/message.py
index c603b594..dad8d5c0 100644
--- a/src/noob/network/message.py
+++ b/src/noob/network/message.py
@@ -35,6 +35,7 @@ class MessageType(StrEnum):
     process = "process"
     init = "init"
     deinit = "deinit"
+    ping = "ping"
     start = "start"
     status = "status"
     stop = "stop"
@@ -113,6 +114,13 @@ class IdentifyMsg(Message):
     value: IdentifyValue
 
 
+class PingMsg(Message):
+    """Request other nodes to identify themselves and report their status"""
+
+    type_: Literal[MessageType.ping] = Field(MessageType.ping, alias="type")
+    value: None = None
+
+
 class ProcessMsg(Message):
     """Process a single iteration of the graph"""
 
diff --git a/src/noob/runner/zmq.py b/src/noob/runner/zmq.py
index 13226fe2..633bce01 100644
--- a/src/noob/runner/zmq.py
+++ b/src/noob/runner/zmq.py
@@ -66,6 +66,7 @@
     Message,
     MessageType,
     NodeStatus,
+    PingMsg,
     ProcessMsg,
     StartMsg,
     StatusMsg,
@@ -192,6 +193,11 @@ def announce(self) -> None:
         )
         self._outbox.send_multipart([b"announce", msg.to_bytes()])
 
+    def ping(self) -> None:
+        """Send a ping message asking everyone to identify themselves"""
+        msg = PingMsg(node_id="command")
+        self._outbox.send_multipart([b"ping", msg.to_bytes()])
+
     def start(self, n: int | None = None) -> None:
         """
         Start running in free-run mode
@@ -222,27 +228,40 @@ def add_callback(self, type_: Literal["inbox", "router"], cb: Callable[[Message]
     def clear_callbacks(self) -> None:
         self._callbacks = defaultdict(list)
 
-    def await_ready(self, node_ids: list[NodeID]) -> None:
+    def await_ready(self, node_ids: list[NodeID], timeout: float = 5) -> None:
         """
         Wait until all the node_ids have announced themselves
         """
-        with self._ready_condition:
-            if set(node_ids) == set(self._nodes):
-                return
 
-            def _is_ready() -> bool:
-                ready_nodes = {
-                    node_id for node_id, state in self._nodes.items() if state["status"] == "ready"
-                }
-                waiting_for = set(node_ids)
-                self.logger.debug(
-                    "Checking if ready, ready nodes are: %s, waiting for %s",
-                    ready_nodes,
-                    waiting_for,
-                )
-                return waiting_for == ready_nodes
+        def _ready_nodes() -> set[str]:
+            return {node_id for node_id, state in self._nodes.items() if state["status"] == "ready"}
 
-            self._ready_condition.wait_for(_is_ready)
+        def _is_ready() -> bool:
+            ready_nodes = _ready_nodes()
+            waiting_for = set(node_ids)
+            self.logger.debug(
+                "Checking if ready, ready nodes are: %s, waiting for %s",
+                ready_nodes,
+                waiting_for,
+            )
+            return waiting_for.issubset(ready_nodes)
+
+        with self._ready_condition:
+            # ping periodically for identifications in case we have slow subscribers
+            start_time = time()
+            ready = False
+            while time() < start_time + timeout and not ready:
+                ready = self._ready_condition.wait_for(_is_ready, timeout=1)
+                if not ready:
+                    self.ping()
+
+        # if still not ready, timeout
+        if not ready:
+            raise TimeoutError(
+                f"Nodes were not ready after the timeout. "
+                f"Waiting for: {set(node_ids)}, "
+                f"ready: {_ready_nodes()}"
+            )
 
     def on_router(self, msg: list[bytes]) -> None:
         try:
@@ -588,6 +607,8 @@ def on_inbox(self, msg: list[bytes]) -> None:
         elif message.type_ == MessageType.deinit:
             message = cast(DeinitMsg, message)
             self.on_deinit(message)
+        elif message.type_ == MessageType.ping:
+            self.identify()
         else:
             # log but don't throw - other nodes shouldn't be able to crash us
             self.logger.error(f"{message.type_} not implemented!")

From 5c4ef571e8acf9f63e08812be31300a543c73279 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Thu, 22 Jan 2026 19:23:58 -0800
Subject: [PATCH 05/18] ping message in the discriminator

---
 src/noob/network/message.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/src/noob/network/message.py b/src/noob/network/message.py
index dad8d5c0..339986ec 100644
--- a/src/noob/network/message.py
+++ b/src/noob/network/message.py
@@ -222,6 +222,7 @@ def _type_discriminator(v: dict | Message) -> str:
     | A[ProcessMsg, Tag("process")]
     | A[InitMsg, Tag("init")]
     | A[DeinitMsg, Tag("deinit")]
+    | A[PingMsg, Tag("ping")]
     | A[StartMsg, Tag("start")]
     | A[StatusMsg, Tag("status")]
     | A[StopMsg, Tag("stop")]

From ee830535e3c6da2043838ce439ea149b8603422e Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Thu, 22 Jan 2026 19:26:47 -0800
Subject: [PATCH 06/18] mypy

---
 src/noob/logging.py | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/src/noob/logging.py b/src/noob/logging.py
index 1eb33f65..255b71cc 100644
--- a/src/noob/logging.py
+++ b/src/noob/logging.py
@@ -153,7 +153,6 @@ def _file_handler(
     file_handler = RotatingFileHandler(
         str(filename), mode="a", maxBytes=log_file_size, backupCount=log_file_n
     )
-    file_handler._pid = mp.current_process().pid
     file_formatter = logging.Formatter("[%(asctime)s] %(levelname)s [%(name)s]: %(message)s")
     file_handler.setLevel(file_level)
     file_handler.setFormatter(file_formatter)
@@ -178,7 +177,7 @@ def _rich_handler(
     return rich_handler
 
 
-_console_by_pid: dict[int, Console] = {}
+_console_by_pid: dict[int | None, Console] = {}
 
 
 def _get_console() -> Console:

From b37b79c85798c0dabdf5df68f3cac493cd981c6d Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Thu, 22 Jan 2026 19:48:31 -0800
Subject: [PATCH 07/18] more logging, quitting zmqrunner on timeout in command
 node

---
 src/noob/runner/zmq.py | 24 ++++++++++++++++++++----
 1 file changed, 20 insertions(+), 4 deletions(-)

diff --git a/src/noob/runner/zmq.py b/src/noob/runner/zmq.py
index 633bce01..c595f90b 100644
--- a/src/noob/runner/zmq.py
+++ b/src/noob/runner/zmq.py
@@ -502,6 +502,8 @@ def identify(self) -> None:
                 "Node was not initialized by the time we tried to "
                 "identify ourselves to the command node."
             )
+
+        self.logger.debug("Identifying")
         with self._status_lock:
             ann = IdentifyMsg(
                 node_id=self.spec.id,
@@ -520,10 +522,12 @@ def identify(self) -> None:
 
     def update_status(self, status: NodeStatus) -> None:
         """Update our internal status and announce it to the command node"""
+        self.logger.debug("Updating status as %s", status)
         with self._status_lock:
             self.status = status
             msg = StatusMsg(node_id=self.spec.id, value=status)
             self._dealer.send_multipart([msg.to_bytes()])
+            self.logger.debug("Updated status")
 
     def start_sockets(self) -> None:
         self.start_loop()
@@ -619,12 +623,16 @@ def on_announce(self, msg: AnnounceMsg) -> None:
         Store map, connect to the nodes we depend on
         """
         self._node = cast(Node, self._node)
+        self.logger.debug("Processing announce")
         with self._status_lock:
             depended_nodes = {edge.source_node for edge in self._node.edges}
+            if depended_nodes:
+                self.logger.debug("Should subscribe to %s", depended_nodes)
             for node_id in msg.value["nodes"]:
                 if node_id in depended_nodes and node_id not in self._nodes:
                     # TODO: a way to check if we're already connected, without storing it locally?
                     outbox = msg.value["nodes"][node_id]["outbox"]
+                    self.logger.debug("Subscribing to %s at %s", node_id, outbox)
                     self._inbox.connect(outbox)
                     self.logger.debug("Subscribed to %s at %s", node_id, outbox)
             self._nodes = msg.value["nodes"]
@@ -744,7 +752,7 @@ class ZMQRunner(TubeRunner):
 
     _initialized: EventType = field(default_factory=mp.Event)
     _running: EventType = field(default_factory=mp.Event)
-    _init_lock: threading.Lock = field(default_factory=threading.Lock)
+    _init_lock: threading.Lock = field(default_factory=threading.RLock)
     _running_lock: threading.Lock = field(default_factory=threading.Lock)
     _return_node: Return | None = None
     _to_throw: ErrorValue | None = None
@@ -789,9 +797,17 @@ def init(self) -> None:
                 )
                 self.node_procs[node_id].start()
             self._logger.debug("Started node processes, awaiting ready")
-            self.command.await_ready(
-                [k for k, v in self.tube.nodes.items() if not isinstance(v, Return)]
-            )
+            try:
+                self.command.await_ready(
+                    [k for k, v in self.tube.nodes.items() if not isinstance(v, Return)]
+                )
+            except TimeoutError as e:
+                self._logger.debug("Timeouterror, deinitializing before throwing")
+                self._initialized.set()
+                self.deinit()
+                self._logger.exception(e)
+                raise
+
             self._logger.debug("Nodes ready")
             self._initialized.set()
 

From 4bf6723efd9cdb2de5648c8b0b302d175d1c3bfb Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Thu, 22 Jan 2026 20:05:00 -0800
Subject: [PATCH 08/18] releasing thread in async from sync

---
 src/noob/runner/base.py | 12 ++++++++++--
 1 file changed, 10 insertions(+), 2 deletions(-)

diff --git a/src/noob/runner/base.py b/src/noob/runner/base.py
index 49b5bb37..876dd65c 100644
--- a/src/noob/runner/base.py
+++ b/src/noob/runner/base.py
@@ -553,25 +553,33 @@ def call_async_from_sync(
 
     result_future: asyncio.Future[_TReturn] = asyncio.Future()
     work_ready = threading.Condition()
+    finished = False
 
     # Closures because this code should never escape the containment tomb of this crime against god
     async def _wrap(call_result: asyncio.Future[_TReturn], fn: Coroutine) -> None:
+        nonlocal finished
         try:
             result = await fn
             call_result.set_result(result)
         except Exception as e:
             call_result.set_exception(e)
+        finally:
+            finished = True
 
     def _done(_: ConcurrentFuture) -> None:
+        nonlocal finished
+
+        finished = True
         with work_ready:
             work_ready.notify_all()
 
     future_inner = executor.submit(asyncio.run, _wrap(result_future, coro))
     future_inner.add_done_callback(_done)
 
-    with work_ready:
-        work_ready.wait()
     try:
+        while not finished and not future_inner.done():
+            with work_ready:
+                work_ready.wait(timeout=1)
         res = result_future.result()
         return res
     finally:

From a71cd8521ecf8cd7228cda94ee0707dcd22afcc6 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Thu, 22 Jan 2026 20:19:49 -0800
Subject: [PATCH 09/18] can we not debug log always pretty please

---
 tests/conftest.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/conftest.py b/tests/conftest.py
index b0dbf590..44350224 100644
--- a/tests/conftest.py
+++ b/tests/conftest.py
@@ -32,7 +32,7 @@ def _config_sources(cls: type[ConfigYAMLMixin]) -> list[Path]:
 def patch_env_config(monkeypatch_session: MonkeyPatch) -> None:
     """Patch env settings, e.g. setting log levels and etc."""
 
-    monkeypatch_session.setenv("NOOB_LOGS__LEVEL", "DEBUG")
+    # monkeypatch_session.setenv("NOOB_LOGS__LEVEL", "DEBUG")
 
 
 def pytest_collection_modifyitems(config: pytest.Config, items: list[pytest.Item]) -> None:

From eb9de9e1b3d3543df5a29a0e17f0ac47479c8c66 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Thu, 22 Jan 2026 20:24:59 -0800
Subject: [PATCH 10/18] mypy

---
 src/noob/runner/zmq.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/noob/runner/zmq.py b/src/noob/runner/zmq.py
index c595f90b..b2bfa5f0 100644
--- a/src/noob/runner/zmq.py
+++ b/src/noob/runner/zmq.py
@@ -752,7 +752,7 @@ class ZMQRunner(TubeRunner):
 
     _initialized: EventType = field(default_factory=mp.Event)
     _running: EventType = field(default_factory=mp.Event)
-    _init_lock: threading.Lock = field(default_factory=threading.RLock)
+    _init_lock: threading.RLock = field(default_factory=threading.RLock)
     _running_lock: threading.Lock = field(default_factory=threading.Lock)
     _return_node: Return | None = None
     _to_throw: ErrorValue | None = None

From abada36386c1c030abe1e2f22a104f91b7a09fe7 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Fri, 23 Jan 2026 15:50:01 -0800
Subject: [PATCH 11/18] completing tests for zmq freerun, stores clear by
 default

---
 pylock.toml                                   | 851 +++++++++---------
 pyproject.toml                                |   1 +
 src/noob/node/base.py                         |  10 +-
 src/noob/runner/zmq.py                        |  72 +-
 src/noob/store.py                             |   4 +-
 src/noob/testing/__init__.py                  |   2 +
 src/noob/testing/nodes.py                     |  20 +
 tests/data/pipelines/special/count_inits.yaml |   7 +
 tests/test_runners/test_zmq.py                | 182 +++-
 9 files changed, 689 insertions(+), 460 deletions(-)
 create mode 100644 tests/data/pipelines/special/count_inits.yaml

diff --git a/pylock.toml b/pylock.toml
index cd949d6b..a2129172 100644
--- a/pylock.toml
+++ b/pylock.toml
@@ -12,17 +12,52 @@ created-by = "pdm"
 
 [[packages]]
 name = "faker"
-version = "40.1.2"
+version = "39.0.0"
 requires-python = ">=3.10"
-sdist = {name = "faker-40.1.2.tar.gz", url = "https://files.pythonhosted.org/packages/5e/77/1c3ff07b6739b9a1d23ca01ec0a90a309a33b78e345a3eb52f9ce9240e36/faker-40.1.2.tar.gz", hashes = {sha256 = "b76a68163aa5f171d260fc24827a8349bc1db672f6a665359e8d0095e8135d30"}}
+sdist = {name = "faker-39.0.0.tar.gz", url = "https://files.pythonhosted.org/packages/30/b9/0897fb5888ddda099dc0f314a8a9afb5faa7e52eaf6865c00686dfb394db/faker-39.0.0.tar.gz", hashes = {sha256 = "ddae46d3b27e01cea7894651d687b33bcbe19a45ef044042c721ceac6d3da0ff"}}
 wheels = [
-    {name = "faker-40.1.2-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/46/ec/91a434c8a53d40c3598966621dea9c50512bec6ce8e76fa1751015e74cef/faker-40.1.2-py3-none-any.whl",hashes = {sha256 = "93503165c165d330260e4379fd6dc07c94da90c611ed3191a0174d2ab9966a42"}},
+    {name = "faker-39.0.0-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/eb/5a/26cdb1b10a55ac6eb11a738cea14865fa753606c4897d7be0f5dc230df00/faker-39.0.0-py3-none-any.whl",hashes = {sha256 = "c72f1fca8f1a24b8da10fcaa45739135a19772218ddd61b86b7ea1b8c790dce7"}},
 ]
 marker = "\"dev\" in extras or \"docs\" in extras or \"tests\" in extras"
 
 [packages.tool.pdm]
 dependencies = [
-    "tzdata; platform_system == \"Windows\"",
+    "tzdata",
+]
+
+[[packages]]
+name = "autodoc-pydantic"
+version = "2.2.0"
+requires-python = "<4.0.0,>=3.8.1"
+wheels = [
+    {name = "autodoc_pydantic-2.2.0-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/7b/df/87120e2195f08d760bc5cf8a31cfa2381a6887517aa89453b23f1ae3354f/autodoc_pydantic-2.2.0-py3-none-any.whl",hashes = {sha256 = "8c6a36fbf6ed2700ea9c6d21ea76ad541b621fbdf16b5a80ee04673548af4d95"}},
+]
+marker = "\"dev\" in extras or \"docs\" in extras"
+
+[packages.tool.pdm]
+dependencies = [
+    "Sphinx>=4.0",
+    "importlib-metadata>1; python_version <= \"3.8\"",
+    "pydantic<3.0.0,>=2.0",
+    "pydantic-settings<3.0.0,>=2.0",
+]
+
+[[packages]]
+name = "pydantic"
+version = "2.12.5"
+requires-python = ">=3.9"
+sdist = {name = "pydantic-2.12.5.tar.gz", url = "https://files.pythonhosted.org/packages/69/44/36f1a6e523abc58ae5f928898e4aca2e0ea509b5aa6f6f392a5d882be928/pydantic-2.12.5.tar.gz", hashes = {sha256 = "4d351024c75c0f085a9febbb665ce8c0c6ec5d30e903bdb6394b7ede26aebb49"}}
+wheels = [
+    {name = "pydantic-2.12.5-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/5a/87/b70ad306ebb6f9b585f114d0ac2137d792b48be34d732d60e597c2f8465a/pydantic-2.12.5-py3-none-any.whl",hashes = {sha256 = "e561593fccf61e8a20fc46dfc2dfe075b8be7d0188df33f221ad1f0139180f9d"}},
+]
+marker = "\"default\" in dependency_groups or \"dev\" in extras or \"docs\" in extras"
+
+[packages.tool.pdm]
+dependencies = [
+    "annotated-types>=0.6.0",
+    "pydantic-core==2.41.5",
+    "typing-extensions>=4.14.1",
+    "typing-inspection>=0.4.2",
 ]
 
 [[packages]]
@@ -57,54 +92,87 @@ dependencies = [
 ]
 
 [[packages]]
-name = "autodoc-pydantic"
-version = "2.2.0"
-requires-python = "<4.0.0,>=3.8.1"
+name = "typing-extensions"
+version = "4.15.0"
+requires-python = ">=3.9"
+sdist = {name = "typing_extensions-4.15.0.tar.gz", url = "https://files.pythonhosted.org/packages/72/94/1a15dd82efb362ac84269196e94cf00f187f7ed21c242792a923cdb1c61f/typing_extensions-4.15.0.tar.gz", hashes = {sha256 = "0cea48d173cc12fa28ecabc3b837ea3cf6f38c6d1136f85cbaaf598984861466"}}
 wheels = [
-    {name = "autodoc_pydantic-2.2.0-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/7b/df/87120e2195f08d760bc5cf8a31cfa2381a6887517aa89453b23f1ae3354f/autodoc_pydantic-2.2.0-py3-none-any.whl",hashes = {sha256 = "8c6a36fbf6ed2700ea9c6d21ea76ad541b621fbdf16b5a80ee04673548af4d95"}},
+    {name = "typing_extensions-4.15.0-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/18/67/36e9267722cc04a6b9f15c7f3441c2363321a3ea07da7ae0c0707beb2a9c/typing_extensions-4.15.0-py3-none-any.whl",hashes = {sha256 = "f0fa19c6845758ab08074a0cfa8b7aecb71c999ca73d62883bc25cc018c4e548"}},
 ]
-marker = "\"dev\" in extras or \"docs\" in extras"
+marker = "\"default\" in dependency_groups or \"dev\" in extras or \"docs\" in extras or \"mypy\" in extras or \"tests\" in extras"
+
+[packages.tool.pdm]
+dependencies = []
+
+[[packages]]
+name = "black"
+version = "25.12.0"
+requires-python = ">=3.10"
+sdist = {name = "black-25.12.0.tar.gz", url = "https://files.pythonhosted.org/packages/c4/d9/07b458a3f1c525ac392b5edc6b191ff140b596f9d77092429417a54e249d/black-25.12.0.tar.gz", hashes = {sha256 = "8d3dd9cea14bff7ddc0eb243c811cdb1a011ebb4800a5f0335a01a68654796a7"}}
+wheels = [
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+    {name = "black-25.12.0-cp314-cp314-macosx_11_0_arm64.whl",url = "https://files.pythonhosted.org/packages/41/37/68accadf977672beb8e2c64e080f568c74159c1aaa6414b4cd2aef2d7906/black-25.12.0-cp314-cp314-macosx_11_0_arm64.whl",hashes = {sha256 = "2355bbb6c3b76062870942d8cc450d4f8ac71f9c93c40122762c8784df49543f"}},
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+]
+marker = "\"dev\" in extras"
 
 [packages.tool.pdm]
 dependencies = [
-    "Sphinx>=4.0",
-    "importlib-metadata>1; python_version <= \"3.8\"",
-    "pydantic<3.0.0,>=2.0",
-    "pydantic-settings<3.0.0,>=2.0",
+    "click>=8.0.0",
+    "mypy-extensions>=0.4.3",
+    "packaging>=22.0",
+    "pathspec>=0.9.0",
+    "platformdirs>=2",
+    "pytokens>=0.3.0",
+    "tomli>=1.1.0; python_version < \"3.11\"",
+    "typing-extensions>=4.0.1; python_version < \"3.11\"",
 ]
 
 [[packages]]
-name = "pydantic"
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 ]
 marker = "\"dev\" in extras or \"docs\" in extras"
 
@@ -2699,7 +2724,7 @@ sdist = {name = "tzdata-2025.3.tar.gz", url = "https://files.pythonhosted.org/pa
 wheels = [
     {name = "tzdata-2025.3-py2.py3-none-any.whl",url = "https://files.pythonhosted.org/packages/c7/b0/003792df09decd6849a5e39c28b513c06e84436a54440380862b5aeff25d/tzdata-2025.3-py2.py3-none-any.whl",hashes = {sha256 = "06a47e5700f3081aab02b2e513160914ff0694bce9947d6b76ebd6bf57cfc5d1"}},
 ]
-marker = "\"dev\" in extras and platform_system == \"Windows\" or \"docs\" in extras and platform_system == \"Windows\" or \"tests\" in extras and platform_system == \"Windows\""
+marker = "\"dev\" in extras or \"docs\" in extras or \"tests\" in extras"
 
 [packages.tool.pdm]
 dependencies = []
@@ -2718,7 +2743,7 @@ marker = "\"dev\" in extras or \"docs\" in extras"
 dependencies = []
 
 [tool.pdm]
-hashes = {sha256 = "06cadfeb160c3da38784a855b7e6581dddc2b7ad36d78afeeb824ad5252e23ea"}
+hashes = {sha256 = "734c4e3c3ea45903c6017895e6b7a055141eec94fc7a5c991fefa918fa8da5db"}
 strategy = ["inherit_metadata", "static_urls"]
 
 [[tool.pdm.targets]]
diff --git a/pyproject.toml b/pyproject.toml
index cab1da12..4d98b50e 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -67,6 +67,7 @@ tests = [
     "pytest-timeout>=2.4.0",
     "pytest-asyncio>=1.3.0",
     "pytest-codspeed>=4.2.0",
+    "pytest-mock>=3.15.1",
 ]
 docs = [
     "sphinx>=8.2.3,<9.0.0", # until myst parser catches up and stops emitting invalid references
diff --git a/src/noob/node/base.py b/src/noob/node/base.py
index 78b8f48f..b5b3e9a2 100644
--- a/src/noob/node/base.py
+++ b/src/noob/node/base.py
@@ -12,7 +12,6 @@
     cast,
     get_args,
     get_origin,
-    overload,
 )
 
 from pydantic import (
@@ -26,7 +25,6 @@
 
 from noob.introspection import is_optional, is_union
 from noob.node.spec import NodeSpecification
-from noob.types import RunnerContext
 from noob.utils import resolve_python_identifier
 
 if TYPE_CHECKING:
@@ -195,14 +193,8 @@ def model_post_init(self, __context: Any) -> None:
         if inspect.isgeneratorfunction(self.process):
             self._wrap_generator(self.process)
 
-    @overload
-    def init(self) -> None: ...
-
-    @overload
-    def init(self, context: RunnerContext) -> None: ...
-
     # TODO: Support dependency injection in mypy plugin
-    def init(self) -> None:  # type: ignore[misc]
+    def init(self) -> None:
         """
         Start producing, processing, or receiving data.
 
diff --git a/src/noob/runner/zmq.py b/src/noob/runner/zmq.py
index b2bfa5f0..6d749743 100644
--- a/src/noob/runner/zmq.py
+++ b/src/noob/runner/zmq.py
@@ -463,6 +463,8 @@ def await_inputs(self) -> Generator[tuple[tuple[Any], dict[str, Any], int]]:
             if inputs is None:
                 inputs = {}
             args, kwargs = self.store.split_args_kwargs(inputs)
+            # clear events for this epoch, since we have consumed what we need here.
+            self.store.clear(ready["epoch"])
             yield args, kwargs, ready["epoch"]
 
     def update_graph(self, events: list[Event]) -> None:
@@ -662,6 +664,7 @@ def on_start(self, msg: StartMsg) -> None:
         """
         Start running in free mode
         """
+        self.update_status(NodeStatus.running)
         if msg.value is None:
             self._freerun.set()
         else:
@@ -749,11 +752,17 @@ class ZMQRunner(TubeRunner):
     quit_timeout: float = 10
     """time in seconds to wait after calling deinit to wait before killing runner processes"""
     store: EventStore = field(default_factory=EventStore)
+    autoclear_store: bool = True
+    """
+    If ``True`` (default), clear the event store after events are processed and returned.
+    If ``False`` , don't clear events from the event store
+    """
 
     _initialized: EventType = field(default_factory=mp.Event)
     _running: EventType = field(default_factory=mp.Event)
     _init_lock: threading.RLock = field(default_factory=threading.RLock)
     _running_lock: threading.Lock = field(default_factory=threading.Lock)
+    _ignore_events: bool = False
     _return_node: Return | None = None
     _to_throw: ErrorValue | None = None
     _current_epoch: int = 0
@@ -928,28 +937,19 @@ def iter(self, n: int | None = None) -> Generator[ReturnNodeType, None, None]:
                     self._logger.debug("Awaiting epoch %s", epoch)
                     self.tube.scheduler.await_epoch(epoch)
                     ret = self.collect_return(epoch)
-                    self.store.clear(epoch)
                     epoch += 1
                     self._current_epoch = epoch
                     if loop > self.max_iter_loops:
                         raise RuntimeError("Reached maximum process calls per iteration")
                     # if we have run out of epochs to run, request some more with a cheap heuristic
                     if n is not None and epoch >= stop_epoch:
-                        # if we get one return value every 5 epochs,
-                        # and we ran 5 epochs to get 1 result,
-                        # then we need to run 20 more to get the other 4,
-                        # or, (n remaining) * (epochs per result)
-                        # so...
-                        divisor = current_iter if current_iter > 0 else 1
-                        get_more = (n - current_iter) * math.ceil(
-                            (stop_epoch - start_epoch) / divisor
+                        stop_epoch += self._request_more(
+                            n=n, current_iter=current_iter, n_epochs=stop_epoch - start_epoch
                         )
-                        stop_epoch += get_more
-                        self.command.start(get_more)
 
-                # stop here in case we don't exhaust the iterator
-                if n is not None and current_iter >= n:
-                    self.command.stop()
+                # # stop here in case we don't exhaust the iterator
+                # if n is not None and current_iter >= n:
+                #     self.command.stop()
                 current_iter += 1
                 yield ret
 
@@ -993,6 +993,8 @@ def run(self, n: int | None = None) -> None | list[ReturnNodeType]:
         self.command = cast(CommandNode, self.command)
 
         if n is None:
+            if self.autoclear_store:
+                self._ignore_events = True
             self.command.start()
             self._running.set()
             return None
@@ -1008,6 +1010,7 @@ def stop(self) -> None:
         Stop running the tube.
         """
         self.command = cast(CommandNode, self.command)
+        self._ignore_events = False
         self.command.stop()
         self._running.clear()
 
@@ -1018,8 +1021,10 @@ def on_event(self, msg: Message) -> None:
             return
 
         msg = cast(EventMsg, msg)
-        for event in msg.value:
-            self.store.add(event)
+        # store events (if we are not in freerun mode, where we don't want to store infinite events)
+        if not self._ignore_events:
+            for event in msg.value:
+                self.store.add(event)
         self.tube.scheduler.update(msg.value)
         if self._return_node is not None:
             # mark the return node done if we've received the expected events for an epoch
@@ -1050,6 +1055,8 @@ def collect_return(self, epoch: int | None = None) -> Any:
             args, kwargs = self.store.split_args_kwargs(events)
             self._return_node.process(*args, **kwargs)
             ret = self._return_node.get(keep=False)
+            if self.autoclear_store:
+                self.store.clear(epoch)
             return ret
 
     def _handle_error(self, msg: ErrorMsg) -> None:
@@ -1086,6 +1093,39 @@ def _throw_error(self) -> None:
 
         raise err
 
+    def _request_more(self, n: int, current_iter: int, n_epochs: int) -> int:
+        """
+        During iteration with cardinality-reducing nodes,
+        if we haven't gotten the requested n return values in n epochs,
+        request more epochs based on how many return values we got for n iterations
+
+        Args:
+            n (int): number of requested return values
+            current_iter (int): current number of return values that have been collected
+            n_epochs (int): number of epochs that have run
+        """
+        self.command = cast(CommandNode, self.command)
+        n_remaining = n - current_iter
+        if n_remaining <= 0:
+            self._logger.warning(
+                "Asked to request more epochs, but already collected enough return values. "
+                "Ignoring. "
+                "Requested n: %s, collected n: %s",
+                n,
+                current_iter,
+            )
+            return 0
+
+        # if we get one return value every 5 epochs,
+        # and we ran 5 epochs to get 1 result,
+        # then we need to run 20 more to get the other 4,
+        # or, (n remaining) * (epochs per result)
+        # so...
+        divisor = current_iter if current_iter > 0 else 1
+        get_more = math.ceil(n_remaining * (n_epochs / divisor))
+        self.command.start(get_more)
+        return get_more
+
     def enable_node(self, node_id: str) -> None:
         raise NotImplementedError()
 
diff --git a/src/noob/store.py b/src/noob/store.py
index 37f9473e..1dae0089 100644
--- a/src/noob/store.py
+++ b/src/noob/store.py
@@ -2,6 +2,7 @@
 Tube runners for running tubes
 """
 
+import contextlib
 from collections import defaultdict
 from collections.abc import Generator
 from dataclasses import dataclass, field
@@ -193,7 +194,8 @@ def clear(self, epoch: int | None = None) -> None:
         if epoch is None:
             self.events = _make_event_dict()
         else:
-            del self.events[epoch]
+            with contextlib.suppress(KeyError):
+                del self.events[epoch]
 
     @staticmethod
     def transform_events(edges: list[Edge], events: list[Event]) -> dict:
diff --git a/src/noob/testing/__init__.py b/src/noob/testing/__init__.py
index dffdf022..cd182695 100644
--- a/src/noob/testing/__init__.py
+++ b/src/noob/testing/__init__.py
@@ -2,6 +2,7 @@
 from noob.testing.nodes import (
     CountSource,
     CountSourceDecor,
+    InitCounter,
     Multiply,
     Now,
     NumberToLetterCls,
@@ -56,6 +57,7 @@
     "Multiply",
     "VolumeProcess",
     "Volume",
+    "InitCounter",
     "Now",
     "NumberToLetterCls",
     "StatefulMultiply",
diff --git a/src/noob/testing/nodes.py b/src/noob/testing/nodes.py
index 9c9e6cad..1996f88f 100644
--- a/src/noob/testing/nodes.py
+++ b/src/noob/testing/nodes.py
@@ -224,3 +224,23 @@ def increment(
 
 def passthrough(value: Any) -> Any:
     return value
+
+
+class InitCounter(Node):
+    """Count how many times we have been initialized and deinitalized"""
+
+    def __init__(self, *args: Any, **kwargs: Any):
+        super().__init__(*args, **kwargs)
+        self._inits = 0
+        self._deinits = 0
+
+    def process(self) -> tuple[A[int, Name("inits")], A[int, Name("deinits")]]:
+        # sleep to just not have this flood the networking modules.
+        sleep(0.01)
+        return self._inits, self._deinits
+
+    def init(self) -> None:
+        self._inits += 1
+
+    def deinit(self) -> None:
+        self._deinits += 1
diff --git a/tests/data/pipelines/special/count_inits.yaml b/tests/data/pipelines/special/count_inits.yaml
new file mode 100644
index 00000000..5ac62559
--- /dev/null
+++ b/tests/data/pipelines/special/count_inits.yaml
@@ -0,0 +1,7 @@
+noob_id: testing-count-init
+noob_model: noob.tube.TubeSpecification
+noob_version: 0.1.1.dev86+gcf9e11b.d20250725
+
+nodes:
+  counter:
+    type: noob.testing.InitCounter
diff --git a/tests/test_runners/test_zmq.py b/tests/test_runners/test_zmq.py
index c42cf1a7..647f9ebf 100644
--- a/tests/test_runners/test_zmq.py
+++ b/tests/test_runners/test_zmq.py
@@ -1,4 +1,5 @@
 from asyncio import sleep
+from datetime import UTC, datetime
 from time import time
 from typing import cast
 
@@ -6,8 +7,10 @@
 
 from noob import Tube
 from noob.event import Event
+from noob.input import InputCollection
 from noob.network.message import EventMsg, IdentifyMsg, IdentifyValue, Message, NodeStatus
-from noob.runner.zmq import ZMQRunner
+from noob.node.spec import NodeSpecification
+from noob.runner.zmq import NodeRunner, ZMQRunner
 
 pytestmark = pytest.mark.zmq_runner
 
@@ -81,7 +84,7 @@ def _event_cb(event: Message) -> None:
         event = cast(EventMsg, event)
         events.extend(event.value)
 
-    runner = ZMQRunner(tube=tube)
+    runner = ZMQRunner(tube=tube, autoclear_store=False)
     with runner:
         runner.command.add_callback("inbox", _event_cb)
         # skip first epoch
@@ -144,7 +147,7 @@ def _event_cb(event: Message) -> None:
         event = cast(EventMsg, event)
         events.extend(event.value)
 
-    runner = ZMQRunner(tube=tube)
+    runner = ZMQRunner(tube=tube, autoclear_store=False)
     for i in range(3):
         runner.tube.scheduler.add_epoch(i)
         runner.tube.scheduler.done(i, "input")
@@ -200,7 +203,7 @@ async def test_run_freeruns():
     allow nodes to execute as quickly as they can, whenever their deps are satisfied.
     """
     tube = Tube.from_specification("testing-long-add")
-    runner = ZMQRunner(tube)
+    runner = ZMQRunner(tube, autoclear_store=False)
 
     # events = []
     #
@@ -239,49 +242,186 @@ async def test_run_freeruns():
     assert len(set(e["epoch"] for e in count_events)) > 10
 
 
-@pytest.mark.xfail()
-def test_start_stop():
+@pytest.mark.asyncio
+async def test_start_stop():
     """
     The runner can be started and stopped without deinitializing
     """
-    raise NotImplementedError()
+    tube = Tube.from_specification("testing-count-init")
+    events: list[Event] = []
+    router_events: list[Message] = []
 
+    def _event_cb(event: Message) -> None:
+        nonlocal events
+        event = cast(EventMsg, event)
+        events.extend(event.value)
+
+    def _router_cb(msg: Message) -> None:
+        nonlocal router_events
+        router_events.append(msg)
 
-@pytest.mark.xfail()
-def test_iter_gather():
+    runner = ZMQRunner(tube=tube)
+    with runner:
+        runner.command.add_callback("inbox", _event_cb)
+        runner.command.add_callback("router", _router_cb)
+        runner.run()
+        await sleep(0.1)
+        runner.stop()
+        await sleep(0.1)
+        runner.run()
+        await sleep(0.2)
+
+    # sometimes we get the last stop event,
+    # sometimes we dont - we don't wait for it
+    assert 4 >= len(router_events) >= 3
+    assert router_events[1].value == "stopped"
+    first_events = [e for e in events if e["timestamp"] < router_events[1].timestamp]
+    stopped_events = [
+        e
+        for e in events
+        if e["timestamp"] > router_events[1].timestamp
+        and e["timestamp"] < router_events[2].timestamp
+    ]
+    end_events = [e for e in events if e["timestamp"] > router_events[2].timestamp]
+
+    # with the node's sleep, there are time for ~10 runs if there was no latency,
+    # so say we should at least do 5 (10 events)
+    assert len(first_events) > 10
+    # there can be one additional run of the node after the stopped message is sent
+    # if the node is already running when the stop message is received.
+    # (two events, because the node emits two signals)
+    assert len(stopped_events) <= 2
+    assert len(end_events) > 10
+
+    # even though we stopped and started, the nodes should have stated initialized
+    # (and not been deinit'd and reinit'd)
+    inits = [e for e in events if e["signal"] == "inits"]
+    deinits = [e for e in events if e["signal"] == "deinits"]
+    assert len(inits) > 0
+    assert len(deinits) > 0
+    assert all(e["value"] == 1 for e in inits)
+    assert all(e["value"] == 0 for e in deinits)
+
+
+def test_iter_gather(mocker):
     """
     itering over gather should heuristically request more iterations as we go
     """
-    raise NotImplementedError()
+    tube = Tube.from_specification("testing-gather-n")
+    runner = ZMQRunner(tube=tube)
+    # the gather_n pipeline only returns every 5 epochs.
+    # so we are going to request 11 return values, which should require 55 epochs
+    # after we run 11 epochs, (after returning two results)
+    # we should notice that we haven't returned the correct amount yet
+    # and request more.
+    spy = mocker.spy(runner, "_request_more")
+    stop_spy = mocker.spy(runner, "stop")
+    results = []
+    with runner:
+        for result in runner.iter(11):
+            results.append(result)
+
+        # after exhausting the iterator, but before deinit, we should have called stop
+        stop_spy.assert_called_once()
+
+    # for cases like this with deterministic n_gather, only should need to call once.
+    assert spy.call_count == 1
+    spy.assert_called_once_with(n=11, current_iter=2, n_epochs=11)
+    # we don't get an *exact* number of iters to run,
+    # e.g. here we have chosen 11 since it isn't a multiple of 5,
+    # and all we see is "we've run 11 times and gotten 2 results,"
+    # so if 11 epochs yields 2 results, and we want 9 more,
+    # then a reasonable amount of additional times to run might be
+    # ceil((11/2)*9) = 50
+    assert spy.spy_return == 50
 
 
-@pytest.mark.xfail()
 def test_noderunner_stores_clear():
     """
     Stores in the noderunners should clear after they use the events from an epoch
     """
-    raise NotImplementedError()
+    spec = NodeSpecification(
+        id="test_node",
+        type="noob.testing.multiply",
+        depends=[{"left": "other.left"}, {"right": "other.right"}],
+    )
+    runner = NodeRunner(
+        spec=spec,
+        runner_id="testing",
+        command_outbox="/notreal/unused",
+        command_router="/notreal/unused",
+        input_collection=InputCollection(),
+    )
+    runner.init_node()
 
+    # fake a few events
+    events = []
+    for i in range(3):
 
-@pytest.mark.xfail()
-def test_zmqrunner_stores_clear_process():
+        msg = EventMsg(
+            node_id="other",
+            value=[
+                Event(
+                    id=i * 2,
+                    timestamp=datetime.now(UTC),
+                    signal="left",
+                    value=i * 2,
+                    node_id="other",
+                    epoch=i,
+                ),
+                Event(
+                    id=(i * 2) + 1,
+                    timestamp=datetime.now(UTC),
+                    signal="right",
+                    value=(i * 2) + 1,
+                    node_id="other",
+                    epoch=i,
+                ),
+            ],
+        )
+        runner.on_event(msg)
+        events.append(msg)
+
+    runner._freerun.set()
+    assert len(runner.store.events) == 3
+    args, kwargs, epoch = next(runner.await_inputs())
+    assert len(runner.store.events) == 2
+    assert epoch not in runner.store.events
+
+
+@pytest.fixture
+def _zmq_runner_basic() -> ZMQRunner:
+    tube = Tube.from_specification("testing-basic")
+    runner = ZMQRunner(tube=tube)
+    runner.init()
+    yield runner
+    runner.deinit()
+
+
+def test_zmqrunner_stores_clear_process(_zmq_runner_basic):
     """
     ZMQRunner stores clear after returning values from process
     """
-    raise NotImplementedError()
+    runner = _zmq_runner_basic
+    runner.process()
+    assert len(runner.store.events) == 0
 
 
-@pytest.mark.xfail()
-def test_zmqrunner_stores_clear_iter():
+def test_zmqrunner_stores_clear_iter(_zmq_runner_basic):
     """
     ZMQRunner stores clear after returning values while iterating
     """
-    raise NotImplementedError()
+    runner = _zmq_runner_basic
+    for _ in runner.iter(5):
+        assert len(runner.store.events) == 0
 
 
-@pytest.mark.xfail()
-def test_zmqrunner_stores_clear_freerun():
+@pytest.mark.asyncio
+async def test_zmqrunner_stores_clear_freerun(_zmq_runner_basic):
     """
     ZMQRunner doesn't store events while freerunning.
     """
-    raise NotImplementedError()
+    runner = _zmq_runner_basic
+    runner.run()
+    await sleep(0.1)
+    assert len(runner.store.events) == 0

From 65858c72b740d834eb279ac666e2a3694332b98f Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Fri, 23 Jan 2026 15:54:07 -0800
Subject: [PATCH 12/18] iter mode runs ahead of the top-level iterator

---
 tests/test_runners/test_zmq.py | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/tests/test_runners/test_zmq.py b/tests/test_runners/test_zmq.py
index 647f9ebf..d8d445b1 100644
--- a/tests/test_runners/test_zmq.py
+++ b/tests/test_runners/test_zmq.py
@@ -412,8 +412,10 @@ def test_zmqrunner_stores_clear_iter(_zmq_runner_basic):
     ZMQRunner stores clear after returning values while iterating
     """
     runner = _zmq_runner_basic
-    for _ in runner.iter(5):
-        assert len(runner.store.events) == 0
+    for i, _ in enumerate(runner.iter(5)):
+        # we will receive more events from epochs that run ahead of our processing
+        # but we should clear the epoch as we return it from iter
+        assert i not in runner.store.events
 
 
 @pytest.mark.asyncio

From 0e2c75e1969a37155efb899b267b6e6752073a52 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Fri, 23 Jan 2026 16:00:03 -0800
Subject: [PATCH 13/18] why would we be getting extra router events

---
 tests/test_runners/test_zmq.py | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/tests/test_runners/test_zmq.py b/tests/test_runners/test_zmq.py
index d8d445b1..791087c1 100644
--- a/tests/test_runners/test_zmq.py
+++ b/tests/test_runners/test_zmq.py
@@ -271,9 +271,12 @@ def _router_cb(msg: Message) -> None:
         runner.run()
         await sleep(0.2)
 
+    router_events = [
+        e for e in router_events if e.type_ == "status" and e.value in ("stopped", "running")
+    ]
     # sometimes we get the last stop event,
     # sometimes we dont - we don't wait for it
-    assert 4 >= len(router_events) >= 3
+    assert 4 >= len(router_events) >= 3, router_events
     assert router_events[1].value == "stopped"
     first_events = [e for e in events if e["timestamp"] < router_events[1].timestamp]
     stopped_events = [

From be6e797577336535c684d175b85d8ec211bf72c3 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Fri, 23 Jan 2026 16:02:22 -0800
Subject: [PATCH 14/18] update lockfile

---
 pylock.toml | 1048 ++++++++++++++++++++++++++-------------------------
 1 file changed, 525 insertions(+), 523 deletions(-)

diff --git a/pylock.toml b/pylock.toml
index a2129172..bc29f41a 100644
--- a/pylock.toml
+++ b/pylock.toml
@@ -12,52 +12,17 @@ created-by = "pdm"
 
 [[packages]]
 name = "faker"
-version = "39.0.0"
+version = "40.1.2"
 requires-python = ">=3.10"
-sdist = {name = "faker-39.0.0.tar.gz", url = "https://files.pythonhosted.org/packages/30/b9/0897fb5888ddda099dc0f314a8a9afb5faa7e52eaf6865c00686dfb394db/faker-39.0.0.tar.gz", hashes = {sha256 = "ddae46d3b27e01cea7894651d687b33bcbe19a45ef044042c721ceac6d3da0ff"}}
+sdist = {name = "faker-40.1.2.tar.gz", url = "https://files.pythonhosted.org/packages/5e/77/1c3ff07b6739b9a1d23ca01ec0a90a309a33b78e345a3eb52f9ce9240e36/faker-40.1.2.tar.gz", hashes = {sha256 = "b76a68163aa5f171d260fc24827a8349bc1db672f6a665359e8d0095e8135d30"}}
 wheels = [
-    {name = "faker-39.0.0-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/eb/5a/26cdb1b10a55ac6eb11a738cea14865fa753606c4897d7be0f5dc230df00/faker-39.0.0-py3-none-any.whl",hashes = {sha256 = "c72f1fca8f1a24b8da10fcaa45739135a19772218ddd61b86b7ea1b8c790dce7"}},
+    {name = "faker-40.1.2-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/46/ec/91a434c8a53d40c3598966621dea9c50512bec6ce8e76fa1751015e74cef/faker-40.1.2-py3-none-any.whl",hashes = {sha256 = "93503165c165d330260e4379fd6dc07c94da90c611ed3191a0174d2ab9966a42"}},
 ]
 marker = "\"dev\" in extras or \"docs\" in extras or \"tests\" in extras"
 
 [packages.tool.pdm]
 dependencies = [
-    "tzdata",
-]
-
-[[packages]]
-name = "autodoc-pydantic"
-version = "2.2.0"
-requires-python = "<4.0.0,>=3.8.1"
-wheels = [
-    {name = "autodoc_pydantic-2.2.0-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/7b/df/87120e2195f08d760bc5cf8a31cfa2381a6887517aa89453b23f1ae3354f/autodoc_pydantic-2.2.0-py3-none-any.whl",hashes = {sha256 = "8c6a36fbf6ed2700ea9c6d21ea76ad541b621fbdf16b5a80ee04673548af4d95"}},
-]
-marker = "\"dev\" in extras or \"docs\" in extras"
-
-[packages.tool.pdm]
-dependencies = [
-    "Sphinx>=4.0",
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+    {name = "psutil-7.2.1-cp36-abi3-musllinux_1_2_x86_64.whl",url = "https://files.pythonhosted.org/packages/1c/15/dd6fd869753ce82ff64dcbc18356093471a5a5adf4f77ed1f805d473d859/psutil-7.2.1-cp36-abi3-musllinux_1_2_x86_64.whl",hashes = {sha256 = "99a4cd17a5fdd1f3d014396502daa70b5ec21bf4ffe38393e152f8e449757d67"}},
 ]
 marker = "\"dev\" in extras or \"docs\" in extras"
 
@@ -2692,11 +2694,11 @@ dependencies = []
 
 [[packages]]
 name = "pycparser"
-version = "2.23"
-requires-python = ">=3.8"
-sdist = {name = "pycparser-2.23.tar.gz", url = "https://files.pythonhosted.org/packages/fe/cf/d2d3b9f5699fb1e4615c8e32ff220203e43b248e1dfcc6736ad9057731ca/pycparser-2.23.tar.gz", hashes = {sha256 = "78816d4f24add8f10a06d6f05b4d424ad9e96cfebf68a4ddc99c65c0720d00c2"}}
+version = "3.0"
+requires-python = ">=3.10"
+sdist = {name = "pycparser-3.0.tar.gz", url = "https://files.pythonhosted.org/packages/1b/7d/92392ff7815c21062bea51aa7b87d45576f649f16458d78b7cf94b9ab2e6/pycparser-3.0.tar.gz", hashes = {sha256 = "600f49d217304a5902ac3c37e1281c9fe94e4d0489de643a9504c5cdfdfc6b29"}}
 wheels = [
-    {name = "pycparser-2.23-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/a0/e3/59cd50310fc9b59512193629e1984c1f95e5c8ae6e5d8c69532ccc65a7fe/pycparser-2.23-py3-none-any.whl",hashes = {sha256 = "e5c6e8d3fbad53479cab09ac03729e0a9faf2bee3db8208a550daf5af81a5934"}},
+    {name = "pycparser-3.0-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/0c/c3/44f3fbbfa403ea2a7c779186dc20772604442dde72947e7d01069cbe98e3/pycparser-3.0-py3-none-any.whl",hashes = {sha256 = "b727414169a36b7d524c1c3e31839a521725078d7b2ff038656844266160a992"}},
 ]
 marker = "\"dev\" in extras and implementation_name != \"PyPy\" or \"docs\" in extras and implementation_name != \"PyPy\" or \"tests\" in extras and implementation_name != \"PyPy\" or \"zmq\" in extras and implementation_name != \"PyPy\""
 
@@ -2724,18 +2726,18 @@ sdist = {name = "tzdata-2025.3.tar.gz", url = "https://files.pythonhosted.org/pa
 wheels = [
     {name = "tzdata-2025.3-py2.py3-none-any.whl",url = "https://files.pythonhosted.org/packages/c7/b0/003792df09decd6849a5e39c28b513c06e84436a54440380862b5aeff25d/tzdata-2025.3-py2.py3-none-any.whl",hashes = {sha256 = "06a47e5700f3081aab02b2e513160914ff0694bce9947d6b76ebd6bf57cfc5d1"}},
 ]
-marker = "\"dev\" in extras or \"docs\" in extras or \"tests\" in extras"
+marker = "\"dev\" in extras and platform_system == \"Windows\" or \"docs\" in extras and platform_system == \"Windows\" or \"tests\" in extras and platform_system == \"Windows\""
 
 [packages.tool.pdm]
 dependencies = []
 
 [[packages]]
 name = "wcwidth"
-version = "0.2.14"
-requires-python = ">=3.6"
-sdist = {name = "wcwidth-0.2.14.tar.gz", url = "https://files.pythonhosted.org/packages/24/30/6b0809f4510673dc723187aeaf24c7f5459922d01e2f794277a3dfb90345/wcwidth-0.2.14.tar.gz", hashes = {sha256 = "4d478375d31bc5395a3c55c40ccdf3354688364cd61c4f6adacaa9215d0b3605"}}
+version = "0.3.2"
+requires-python = ">=3.8"
+sdist = {name = "wcwidth-0.3.2.tar.gz", url = "https://files.pythonhosted.org/packages/05/07/0b5bcc9812b1b2fd331cc88289ef4d47d428afdbbf0216bb7d53942d93d6/wcwidth-0.3.2.tar.gz", hashes = {sha256 = "d469b3059dab6b1077def5923ed0a8bf5738bd4a1a87f686d5e2de455354c4ad"}}
 wheels = [
-    {name = "wcwidth-0.2.14-py2.py3-none-any.whl",url = "https://files.pythonhosted.org/packages/af/b5/123f13c975e9f27ab9c0770f514345bd406d0e8d3b7a0723af9d43f710af/wcwidth-0.2.14-py2.py3-none-any.whl",hashes = {sha256 = "a7bb560c8aee30f9957e5f9895805edd20602f2d7f720186dfd906e82b4982e1"}},
+    {name = "wcwidth-0.3.2-py3-none-any.whl",url = "https://files.pythonhosted.org/packages/72/c6/1452e716c5af065c018f75d42ca97517a04ac6aae4133722e0424649a07c/wcwidth-0.3.2-py3-none-any.whl",hashes = {sha256 = "817abc6a89e47242a349b5d100cbd244301690d6d8d2ec6335f26fe6640a6315"}},
 ]
 marker = "\"dev\" in extras or \"docs\" in extras"
 
@@ -2743,7 +2745,7 @@ marker = "\"dev\" in extras or \"docs\" in extras"
 dependencies = []
 
 [tool.pdm]
-hashes = {sha256 = "734c4e3c3ea45903c6017895e6b7a055141eec94fc7a5c991fefa918fa8da5db"}
+hashes = {sha256 = "c6cc2d8206ca50bb2f0477bf7bece34c4d4842d43e85a4fe1da3b202b5df6570"}
 strategy = ["inherit_metadata", "static_urls"]
 
 [[tool.pdm.targets]]

From 0e47394ee0d0d7d3dc4a800246e42fddc7e8e2fe Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Fri, 23 Jan 2026 16:02:32 -0800
Subject: [PATCH 15/18] pytest truncating my debugging output

---
 tests/test_runners/test_zmq.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tests/test_runners/test_zmq.py b/tests/test_runners/test_zmq.py
index 791087c1..5ca8125b 100644
--- a/tests/test_runners/test_zmq.py
+++ b/tests/test_runners/test_zmq.py
@@ -276,7 +276,7 @@ def _router_cb(msg: Message) -> None:
     ]
     # sometimes we get the last stop event,
     # sometimes we dont - we don't wait for it
-    assert 4 >= len(router_events) >= 3, router_events
+    assert 4 >= len(router_events) >= 3, str(router_events)
     assert router_events[1].value == "stopped"
     first_events = [e for e in events if e["timestamp"] < router_events[1].timestamp]
     stopped_events = [

From b72c7d8b1f7ab50e3edbd543c7b4204c34bcf013 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Fri, 23 Jan 2026 16:07:05 -0800
Subject: [PATCH 16/18] just get state transitions

---
 tests/test_runners/test_zmq.py | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/tests/test_runners/test_zmq.py b/tests/test_runners/test_zmq.py
index 5ca8125b..e94a55e2 100644
--- a/tests/test_runners/test_zmq.py
+++ b/tests/test_runners/test_zmq.py
@@ -274,6 +274,12 @@ def _router_cb(msg: Message) -> None:
     router_events = [
         e for e in router_events if e.type_ == "status" and e.value in ("stopped", "running")
     ]
+    # we can get duplicate status messages if the command node has to ping to wake up the sockets
+    # so filter just to the transitions
+    router_events = [
+        e for i, e in enumerate(router_events) if i == 0 or router_events[i - 1].value != e.value
+    ]
+
     # sometimes we get the last stop event,
     # sometimes we dont - we don't wait for it
     assert 4 >= len(router_events) >= 3, str(router_events)

From bd4eb65b6bdc97361478be34e5e2fb8e2cb697e6 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Fri, 23 Jan 2026 16:11:26 -0800
Subject: [PATCH 17/18] increase timeouts

---
 src/noob/runner/zmq.py         | 2 +-
 tests/test_runners/test_zmq.py | 7 ++++---
 2 files changed, 5 insertions(+), 4 deletions(-)

diff --git a/src/noob/runner/zmq.py b/src/noob/runner/zmq.py
index 6d749743..2c65205e 100644
--- a/src/noob/runner/zmq.py
+++ b/src/noob/runner/zmq.py
@@ -228,7 +228,7 @@ def add_callback(self, type_: Literal["inbox", "router"], cb: Callable[[Message]
     def clear_callbacks(self) -> None:
         self._callbacks = defaultdict(list)
 
-    def await_ready(self, node_ids: list[NodeID], timeout: float = 5) -> None:
+    def await_ready(self, node_ids: list[NodeID], timeout: float = 10) -> None:
         """
         Wait until all the node_ids have announced themselves
         """
diff --git a/tests/test_runners/test_zmq.py b/tests/test_runners/test_zmq.py
index e94a55e2..f49f2114 100644
--- a/tests/test_runners/test_zmq.py
+++ b/tests/test_runners/test_zmq.py
@@ -294,13 +294,14 @@ def _router_cb(msg: Message) -> None:
     end_events = [e for e in events if e["timestamp"] > router_events[2].timestamp]
 
     # with the node's sleep, there are time for ~10 runs if there was no latency,
-    # so say we should at least do 5 (10 events)
-    assert len(first_events) > 10
+    # but all we really care about is that we got any
+    # (macos runner on gh is very slow to process events, and we don't want to increase wait time)
+    assert len(first_events) > 0
     # there can be one additional run of the node after the stopped message is sent
     # if the node is already running when the stop message is received.
     # (two events, because the node emits two signals)
     assert len(stopped_events) <= 2
-    assert len(end_events) > 10
+    assert len(end_events) > 0
 
     # even though we stopped and started, the nodes should have stated initialized
     # (and not been deinit'd and reinit'd)

From 197fbd08c5725e73420e16e5aaf0f9c4eed49a58 Mon Sep 17 00:00:00 2001
From: sneakers-the-rat <sneakers-the-rat@protonmail.com>
Date: Fri, 23 Jan 2026 16:27:28 -0800
Subject: [PATCH 18/18] cleanup

---
 src/noob/logging.py    | 7 +++++++
 src/noob/runner/zmq.py | 3 ---
 tests/conftest.py      | 7 -------
 3 files changed, 7 insertions(+), 10 deletions(-)

diff --git a/src/noob/logging.py b/src/noob/logging.py
index 255b71cc..54a27191 100644
--- a/src/noob/logging.py
+++ b/src/noob/logging.py
@@ -29,6 +29,13 @@ def init_logger(
     Log to a set of rotating files in the ``log_dir`` according to ``name`` ,
     as well as using the :class:`~rich.RichHandler` for pretty-formatted stdout logs.
 
+    If this method is called from a process that isn't the root process,
+    it will create new rich and file handlers in the root noob logger to avoid
+    deadlocks from threading locks that are copied on forked processes.
+    Since the handlers will be different across processes,
+    to avoid file access conflicts, logging files will have the process's ``pid``
+    appended (e.g. ``noob_12345.log`` )
+
     Args:
         name (str): Name of this logger. Ideally names are hierarchical
             and indicate what they are logging for, eg. ``noob.api.auth``
diff --git a/src/noob/runner/zmq.py b/src/noob/runner/zmq.py
index 2c65205e..ac85991d 100644
--- a/src/noob/runner/zmq.py
+++ b/src/noob/runner/zmq.py
@@ -947,9 +947,6 @@ def iter(self, n: int | None = None) -> Generator[ReturnNodeType, None, None]:
                             n=n, current_iter=current_iter, n_epochs=stop_epoch - start_epoch
                         )
 
-                # # stop here in case we don't exhaust the iterator
-                # if n is not None and current_iter >= n:
-                #     self.command.stop()
                 current_iter += 1
                 yield ret
 
diff --git a/tests/conftest.py b/tests/conftest.py
index 44350224..5265c3bb 100644
--- a/tests/conftest.py
+++ b/tests/conftest.py
@@ -28,13 +28,6 @@ def _config_sources(cls: type[ConfigYAMLMixin]) -> list[Path]:
     monkeypatch_session.setattr(ConfigYAMLMixin, "config_sources", classmethod(_config_sources))
 
 
-@pytest.fixture(scope="session", autouse=True)
-def patch_env_config(monkeypatch_session: MonkeyPatch) -> None:
-    """Patch env settings, e.g. setting log levels and etc."""
-
-    # monkeypatch_session.setenv("NOOB_LOGS__LEVEL", "DEBUG")
-
-
 def pytest_collection_modifyitems(config: pytest.Config, items: list[pytest.Item]) -> None:
     # While zmq runner uses IPC, can't run on windows
     if platform.system() == "Windows":