docs/MultiCurieQueries.ipynb

{
 "cells": [
  {
   "cell_type": "markdown",
   "source": [
    "# Multi-CURIE Query wrapper for Monarch SemSimian"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "329f4b248d901a29"
  },
  {
   "cell_type": "code",
   "outputs": [],
   "source": [
    "import requests\n",
    "import json"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:19.719520Z",
     "start_time": "2024-06-05T20:33:19.615475Z"
    }
   },
   "id": "7693693334ca4f9c",
   "execution_count": 1
  },
  {
   "cell_type": "markdown",
   "source": [
    "## Local 'development' MMCQ query endpoint"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "1808e333dc528fce"
  },
  {
   "cell_type": "code",
   "outputs": [],
   "source": [
    "MMCQ = \"http://localhost:8080/1.5\""
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:20.094580Z",
     "start_time": "2024-06-05T20:33:20.079593Z"
    }
   },
   "id": "a2e9ed8d1bd228b0",
   "execution_count": 2
  },
  {
   "cell_type": "markdown",
   "source": [
    "## Monarch Multi-CURIE Query: \"Meta Knowledge Graph\""
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "160d90e38e6941c"
  },
  {
   "cell_type": "code",
   "outputs": [],
   "source": [
    "MMCQ_MKG = f\"{MMCQ}/meta_knowledge_graph\""
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:20.147531Z",
     "start_time": "2024-06-05T20:33:20.106848Z"
    }
   },
   "id": "28be218cec9b3e7a",
   "execution_count": 3
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  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "{\n",
      "    \"nodes\": {\n",
      "        \"biolink:PhenotypicFeature\": {\n",
      "            \"id_prefixes\": [\n",
      "                \"HP\"\n",
      "            ]\n",
      "        },\n",
      "        \"biolink:Disease\": {\n",
      "            \"id_prefixes\": [\n",
      "                \"MONDO\"\n",
      "            ]\n",
      "        }\n",
      "    },\n",
      "    \"edges\": [\n",
      "        {\n",
      "            \"subject\": \"biolink:PhenotypicFeature\",\n",
      "            \"predicate\": \"biolink:has_member\",\n",
      "            \"object\": \"biolink:PhenotypicFeature\",\n",
      "            \"association\": \"biolink:PhenotypicFeatureToPhenotypicFeatureAssociation\"\n",
      "        },\n",
      "        {\n",
      "            \"subject\": \"biolink:Disease\",\n",
      "            \"predicate\": \"biolink:has_phenotype\",\n",
      "            \"object\": \"biolink:PhenotypicFeature\",\n",
      "            \"association\": \"biolink:DiseaseToPhenotypicFeatureAssociation\"\n",
      "        },\n",
      "        {\n",
      "            \"subject\": \"biolink:PhenotypicFeature\",\n",
      "            \"predicate\": \"biolink:similar_to\",\n",
      "            \"object\": \"biolink:PhenotypicFeature\",\n",
      "            \"association\": \"biolink:PhenotypicFeatureToPhenotypicFeatureAssociation\"\n",
      "        }\n",
      "    ]\n",
      "}\n"
     ]
    }
   ],
   "source": [
    "response = requests.get( MMCQ_MKG )\n",
    "print(json.dumps(response.json(), indent=4)) if response.status_code == 200 else print(f\"MMCQ not accessible, HTTP code == {response.status_code}\")"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:20.240988Z",
     "start_time": "2024-06-05T20:33:20.211197Z"
    }
   },
   "id": "527c9e5646decf0b",
   "execution_count": 4
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "id": "8ce22607-8e7a-4091-a9c8-475cbaee2686",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:20.319311Z",
     "start_time": "2024-06-05T20:33:20.255341Z"
    }
   },
   "outputs": [],
   "source": [
    "MMCQ_QUERY = f\"{MMCQ}/query\""
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "id": "3e93637c-9443-4744-99dd-adecdce06a9c",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:20.397070Z",
     "start_time": "2024-06-05T20:33:20.320353Z"
    }
   },
   "outputs": [],
   "source": [
    "def generate_trapi_query(input_node_type,output_node_type,input_curies,predicate,input_is_subject=True,set_interpretation=\"MANY\"):\n",
    "    envelope = {\"message\":{\"query_graph\": {\"nodes\":{\"input\":{},\"output\":{}}, \"edges\":{\"edge_0\":{}}}}}\n",
    "    input_node = envelope[\"message\"][\"query_graph\"][\"nodes\"][\"input\"]\n",
    "    input_node[\"categories\"] = [input_node_type]\n",
    "    input_node[\"is_set\"] = True\n",
    "    input_node[\"set_interpretation\"]=set_interpretation\n",
    "    input_node[\"ids\"] = [\"uuid:1\"]\n",
    "    input_node[\"member_ids\"] = input_curies\n",
    "    output_node = envelope[\"message\"][\"query_graph\"][\"nodes\"][\"output\"]\n",
    "    output_node[\"categories\"] = [output_node_type]\n",
    "    query_edge = envelope[\"message\"][\"query_graph\"][\"edges\"][\"edge_0\"]\n",
    "    if input_is_subject:\n",
    "        query_edge[\"subject\"] = \"input\"\n",
    "        query_edge[\"object\"] = \"output\"\n",
    "    else:\n",
    "        query_edge[\"subject\"] = \"output\"\n",
    "        query_edge[\"object\"] = \"input\"\n",
    "    query_edge[\"predicates\"]  = [ predicate ]\n",
    "    #query_edge[\"knowledge_type\"] = \"inferred\"\n",
    "    return envelope"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 7,
   "id": "39699889-ef49-44f9-a23f-6106c2ce6227",
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     "end_time": "2024-06-05T20:33:20.485300Z",
     "start_time": "2024-06-05T20:33:20.398113Z"
    }
   },
   "outputs": [],
   "source": [
    "def phenotypes_to_disease(phenotypes, set_interpretation=\"MANY\"):\n",
    "    #Phenotype to Disease\n",
    "    input_type = \"biolink:PhenotypicFeature\"\n",
    "    output_type = \"biolink:Disease\"\n",
    "    predicate = \"biolink:has_phenotype\"\n",
    "    input_is_subject = \"False\"\n",
    "    query = generate_trapi_query( input_type, output_type, phenotypes, predicate, input_is_subject, set_interpretation=set_interpretation)\n",
    "    p2d_response = requests.post( MMCQ_QUERY, json = query )\n",
    "    print(p2d_response.status_code)\n",
    "    return p2d_response.json()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 8,
   "id": "f44861fd-b83c-4bc0-a289-df6c6bf034bc",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:23.910330Z",
     "start_time": "2024-06-05T20:33:20.487487Z"
    }
   },
   "outputs": [],
   "source": [
    "# The phenotypes-to-geno use case isn't yet supported by the MMCQ (but could be sometime soon?) \n",
    "# \n",
    "# def phenotypes_to_gene(phenotypes):\n",
    "#     #Phenotype to Gene\n",
    "#     input_type = \"biolink:PhenotypicFeature\"\n",
    "#     output_type = \"biolink:Gene\"\n",
    "#     predicate = \"biolink:genetically_associated_with\"\n",
    "#     input_is_subject = \"True\"\n",
    "#     query = generate_trapi_query( input_type, output_type, phenotypes, predicate, input_is_subject)\n",
    "#     response = requests.post( MMCQ_QUERY, json = query )\n",
    "#     print(response.status_code)\n",
    "#     return response.json()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 9,
   "id": "235d05ea-e5b2-4954-9075-3265c093edf5",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:24.031433Z",
     "start_time": "2024-06-05T20:33:23.912329Z"
    }
   },
   "outputs": [],
   "source": [
    "def print_results(resp):\n",
    "    for result in resp[\"message\"][\"results\"]:\n",
    "        nb = result[\"node_bindings\"][\"output\"][0][\"id\"]\n",
    "        name = resp[\"message\"][\"knowledge_graph\"][\"nodes\"][nb][\"name\"]\n",
    "        print(nb, name) "
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "## Sample query: Leigh Disease"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "93b0911e222618f8"
  },
  {
   "cell_type": "code",
   "execution_count": 10,
   "id": "25e83c2c-bcfa-4670-b4c0-72588a9e61a6",
   "metadata": {
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     "end_time": "2024-06-05T20:33:24.108643Z",
     "start_time": "2024-06-05T20:33:24.033172Z"
    }
   },
   "outputs": [],
   "source": [
    "leigh_phenotypes = [\"HP:0000739\", #| Anxiety, \n",
    "                    \"HP:0001288\", # | Gait disturbance, \n",
    "                    \"HP:0001252\", # | Hypotonia, \n",
    "                    \"HP:0001250\", # | Seizure, \n",
    "                    \"HP:0000750\", # | Delayed speech and language development, \n",
    "                    \"HP:0002378\", # | Hand tremor, \n",
    "                    \"HP:0002019\", # | Constipation, \n",
    "                    \"HP:0007146\"] # | Bilateral basal ganglia lesions"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'MANY'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "628fe9a21e623ca5"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(leigh_phenotypes)"
   ],
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:26.867409Z",
     "start_time": "2024-06-05T20:33:24.110326Z"
    }
   },
   "id": "877c9650-b9cc-460d-8a0e-1e4423db32f9",
   "execution_count": 11
  },
  {
   "cell_type": "markdown",
   "source": [
    "### Raw TRAPI response"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "d0b63327b289b4f0"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "{\n",
      "    \"message\": {\n",
      "        \"query_graph\": {\n",
      "            \"nodes\": {\n",
      "                \"input\": {\n",
      "                    \"ids\": [\n",
      "                        \"uuid:1\"\n",
      "                    ],\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\"\n",
      "                    ],\n",
      "                    \"set_interpretation\": \"MANY\",\n",
      "                    \"constraints\": [],\n",
      "                    \"member_ids\": [\n",
      "                        \"HP:0000739\",\n",
      "                        \"HP:0001288\",\n",
      "                        \"HP:0001252\",\n",
      "                        \"HP:0001250\",\n",
      "                        \"HP:0000750\",\n",
      "                        \"HP:0002378\",\n",
      "                        \"HP:0002019\",\n",
      "                        \"HP:0007146\"\n",
      "                    ],\n",
      "                    \"is_set\": true\n",
      "                },\n",
      "                \"output\": {\n",
      "                    \"ids\": null,\n",
      "                    \"categories\": [\n",
      "                        \"biolink:Disease\"\n",
      "                    ],\n",
      "                    \"set_interpretation\": \"BATCH\",\n",
      "                    \"constraints\": [],\n",
      "                    \"member_ids\": []\n",
      "                }\n",
      "            },\n",
      "            \"edges\": {\n",
      "                \"edge_0\": {\n",
      "                    \"subject\": \"input\",\n",
      "                    \"object\": \"output\",\n",
      "                    \"knowledge_type\": null,\n",
      "                    \"predicates\": [\n",
      "                        \"biolink:has_phenotype\"\n",
      "                    ],\n",
      "                    \"attribute_constraints\": [],\n",
      "                    \"qualifier_constraints\": []\n",
      "                }\n",
      "            }\n",
      "        },\n",
      "        \"knowledge_graph\": {\n",
      "            \"nodes\": {\n",
      "                \"uuid:1\": {\n",
      "                    \"members\": [\n",
      "                        \"HP:0000739\",\n",
      "                        \"HP:0001288\",\n",
      "                        \"HP:0001252\",\n",
      "                        \"HP:0001250\",\n",
      "                        \"HP:0000750\",\n",
      "                        \"HP:0002378\",\n",
      "                        \"HP:0002019\",\n",
      "                        \"HP:0007146\"\n",
      "                    ],\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": true,\n",
      "                    \"provided_by\": [\n",
      "                        \"infores:user-interface\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0000739\": {\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": [\n",
      "                        \"infores:user-interface\"\n",
      "                    ],\n",
      "                    \"name\": \"Anxiety\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001288\": {\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": [\n",
      "                        \"infores:user-interface\"\n",
      "                    ],\n",
      "                    \"name\": \"Gait disturbance\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001252\": {\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": [\n",
      "                        \"infores:user-interface\"\n",
      "                    ],\n",
      "                    \"name\": \"Hypotonia\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001250\": {\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": [\n",
      "                        \"infores:user-interface\"\n",
      "                    ],\n",
      "                    \"name\": \"Seizure\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0000750\": {\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": [\n",
      "                        \"infores:user-interface\"\n",
      "                    ],\n",
      "                    \"name\": \"Delayed speech and language development\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002378\": {\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": [\n",
      "                        \"infores:user-interface\"\n",
      "                    ],\n",
      "                    \"name\": \"Hand tremor\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002019\": {\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": [\n",
      "                        \"infores:user-interface\"\n",
      "                    ],\n",
      "                    \"name\": \"Constipation\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0007146\": {\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": [\n",
      "                        \"infores:user-interface\"\n",
      "                    ],\n",
      "                    \"name\": \"Bilateral basal ganglia lesions\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"MONDO:0007496\": {\n",
      "                    \"name\": \"dystonia 12\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:Disease\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": \"infores:upheno\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001270\": {\n",
      "                    \"name\": \"Motor delay\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001290\": {\n",
      "                    \"name\": \"Generalized hypotonia\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002066\": {\n",
      "                    \"name\": \"Gait ataxia\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002015\": {\n",
      "                    \"name\": \"Dysphagia\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002322\": {\n",
      "                    \"name\": \"Resting tremor\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001272\": {\n",
      "                    \"name\": \"Cerebellar atrophy\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"MONDO:0044637\": {\n",
      "                    \"name\": \"infantile-onset generalized dyskinesia with orofacial involvement\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:Disease\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": \"infores:upheno\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0100248\": {\n",
      "                    \"name\": \"Hemiballismus\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0008936\": {\n",
      "                    \"name\": \"Axial hypotonia\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002317\": {\n",
      "                    \"name\": \"Unsteady gait\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0011968\": {\n",
      "                    \"name\": \"Feeding difficulties\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001337\": {\n",
      "                    \"name\": \"Tremor\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"MONDO:0957203\": {\n",
      "                    \"name\": \"intellectual developmental disorder, X-linked 111\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:Disease\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": \"infores:upheno\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001257\": {\n",
      "                    \"name\": \"Spasticity\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0034295\": {\n",
      "                    \"name\": \"Reduced cerebral white matter volume\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"MONDO:0008590\": {\n",
      "                    \"name\": \"tremor, hereditary essential, 1\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:Disease\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": \"infores:upheno\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001260\": {\n",
      "                    \"name\": \"Dysarthria\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002345\": {\n",
      "                    \"name\": \"Action tremor\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002174\": {\n",
      "                    \"name\": \"Postural tremor\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"MONDO:0010313\": {\n",
      "                    \"name\": \"intellectual disability, X-linked 63\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:Disease\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": \"infores:upheno\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001347\": {\n",
      "                    \"name\": \"Hyperreflexia\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0000729\": {\n",
      "                    \"name\": \"Autistic behavior\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0000252\": {\n",
      "                    \"name\": \"Microcephaly\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"MONDO:0859257\": {\n",
      "                    \"name\": \"intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:Disease\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": \"infores:upheno\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001332\": {\n",
      "                    \"name\": \"Dystonia\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002069\": {\n",
      "                    \"name\": \"Bilateral tonic-clonic seizure\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002063\": {\n",
      "                    \"name\": \"Rigidity\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0031825\": {\n",
      "                    \"name\": \"Freezing of gait\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0034316\": {\n",
      "                    \"name\": \"Thinning of the substantia nigra pars compacta\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"MONDO:0013708\": {\n",
      "                    \"name\": \"intellectual disability, autosomal recessive 25\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:Disease\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": \"infores:upheno\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002342\": {\n",
      "                    \"name\": \"Intellectual disability, moderate\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"MONDO:0859211\": {\n",
      "                    \"name\": \"neurodevelopmental disorder with hyperkinetic movements and dyskinesia\",\n",
      "                    \"categories\": [\n",
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      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": \"infores:upheno\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001263\": {\n",
      "                    \"name\": \"Global developmental delay\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0033725\": {\n",
      "                    \"name\": \"Thin corpus callosum\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"MONDO:0020762\": {\n",
      "                    \"name\": \"diencephalic-mesencephalic junction dysplasia syndrome 2\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:Disease\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
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      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": \"infores:upheno\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001344\": {\n",
      "                    \"name\": \"Absent speech\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002510\": {\n",
      "                    \"name\": \"Spastic tetraplegia\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002540\": {\n",
      "                    \"name\": \"Inability to walk\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0008872\": {\n",
      "                    \"name\": \"Feeding difficulties in infancy\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0002134\": {\n",
      "                    \"name\": \"Abnormal basal ganglia morphology\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"MONDO:0020846\": {\n",
      "                    \"name\": \"intellectual disability, autosomal recessive 64\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:Disease\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"is_set\": false,\n",
      "                    \"provided_by\": \"infores:upheno\",\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0000718\": {\n",
      "                    \"name\": \"Aggressive behavior\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                },\n",
      "                \"HP:0001350\": {\n",
      "                    \"name\": \"Slurred speech\",\n",
      "                    \"categories\": [\n",
      "                        \"biolink:PhenotypicFeature\",\n",
      "                        \"biolink:DiseaseOrPhenotypicFeature\",\n",
      "                        \"biolink:BiologicalEntity\",\n",
      "                        \"biolink:NamedThing\",\n",
      "                        \"biolink:Entity\"\n",
      "                    ],\n",
      "                    \"attributes\": []\n",
      "                }\n",
      "            },\n",
      "            \"edges\": {\n",
      "                \"e0001\": {\n",
      "                    \"subject\": \"HP:0000739\",\n",
      "                    \"predicate\": \"biolink:member_of\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:user-interface\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"manual_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0002\": {\n",
      "                    \"subject\": \"HP:0001288\",\n",
      "                    \"predicate\": \"biolink:member_of\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
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      "                            \"resource_id\": \"infores:user-interface\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                        },\n",
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      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
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      "                        },\n",
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      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
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      "                },\n",
      "                \"e0003\": {\n",
      "                    \"subject\": \"HP:0001252\",\n",
      "                    \"predicate\": \"biolink:member_of\",\n",
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      "                    \"sources\": [\n",
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      "                            \"resource_id\": \"infores:user-interface\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
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      "                        },\n",
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      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
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      "                        }\n",
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      "                },\n",
      "                \"e0004\": {\n",
      "                    \"subject\": \"HP:0001250\",\n",
      "                    \"predicate\": \"biolink:member_of\",\n",
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      "                    \"sources\": [\n",
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      "                            \"resource_id\": \"infores:user-interface\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"manual_agent\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0005\": {\n",
      "                    \"subject\": \"HP:0000750\",\n",
      "                    \"predicate\": \"biolink:member_of\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:user-interface\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:user-interface\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"manual_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0006\": {\n",
      "                    \"subject\": \"HP:0002378\",\n",
      "                    \"predicate\": \"biolink:member_of\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:user-interface\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:user-interface\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"manual_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0007\": {\n",
      "                    \"subject\": \"HP:0002019\",\n",
      "                    \"predicate\": \"biolink:member_of\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:user-interface\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:user-interface\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"manual_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0008\": {\n",
      "                    \"subject\": \"HP:0007146\",\n",
      "                    \"predicate\": \"biolink:member_of\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:user-interface\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:user-interface\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"manual_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0025\": {\n",
      "                    \"subject\": \"MONDO:0007496\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:score\",\n",
      "                            \"value\": 12.172652978735602,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:support_graphs\",\n",
      "                            \"value\": [\n",
      "                                \"sg-e0025\"\n",
      "                            ],\n",
      "                            \"value_type_id\": \"linkml:String\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
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      "                \"e0009\": {\n",
      "                    \"subject\": \"HP:0000739\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 17.191454466846494,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000739\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0010\": {\n",
      "                    \"subject\": \"MONDO:0007496\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                    \"subject\": \"HP:0001270\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 13.38409954478889,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0012758\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
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      "                \"e0012\": {\n",
      "                    \"subject\": \"MONDO:0007496\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001270\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
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      "                \"e0013\": {\n",
      "                    \"subject\": \"HP:0001250\",\n",
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      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 9.748510970997767,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001250\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0014\": {\n",
      "                    \"subject\": \"MONDO:0007496\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0015\": {\n",
      "                    \"subject\": \"HP:0001290\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0001252\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 14.38409954478889,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001252\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                    \"subject\": \"MONDO:0007496\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001290\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
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      "                            \"resource_role\": \"supporting_data_source\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
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      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.982001101217545,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001288\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                    \"subject\": \"MONDO:0007496\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002066\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
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      "                    \"sources\": [\n",
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      "                            \"source_record_urls\": null,\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 10.924667926151594,\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0025032\",\n",
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      "                        },\n",
      "                        {\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                    \"subject\": \"MONDO:0007496\",\n",
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      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
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      "                        {\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
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      "                    \"sources\": [\n",
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      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
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      "                        },\n",
      "                        {\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                    \"attributes\": [\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
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      "                        {\n",
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      "                            \"value\": \"automated_agent\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                    \"subject\": \"MONDO:0007496\",\n",
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      "                    \"sources\": [\n",
      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                    \"attributes\": [\n",
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      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
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      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
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      "                        {\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
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      "                    \"sources\": [\n",
      "                        {\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 9.014034928857258,\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
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      "                            \"value\": \"HP:0012443\",\n",
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      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0024\": {\n",
      "                    \"subject\": \"MONDO:0007496\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001272\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0042\": {\n",
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      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
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      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
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      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
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      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:score\",\n",
      "                            \"value\": 12.056729703763917,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:support_graphs\",\n",
      "                            \"value\": [\n",
      "                                \"sg-e0042\"\n",
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      "                            \"value_type_id\": \"linkml:String\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
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      "                \"e0040\": {\n",
      "                    \"subject\": \"HP:0100248\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0007146\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.833902462228412,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0002134\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0041\": {\n",
      "                    \"subject\": \"MONDO:0044637\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0100248\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0028\": {\n",
      "                    \"subject\": \"HP:0001270\",\n",
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      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 13.38409954478889,\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0012758\",\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                    \"subject\": \"MONDO:0044637\",\n",
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      "                    \"object\": \"HP:0001270\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
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      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                                \"infores:upheno\"\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 9.748510970997767,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001250\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0031\": {\n",
      "                    \"subject\": \"MONDO:0044637\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 14.38409954478889,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001252\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0033\": {\n",
      "                    \"subject\": \"MONDO:0044637\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0008936\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0034\": {\n",
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      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.982001101217545,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001288\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0035\": {\n",
      "                    \"subject\": \"MONDO:0044637\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002317\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0036\": {\n",
      "                    \"subject\": \"HP:0011968\",\n",
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      "                    \"object\": \"HP:0002019\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.284563871237976,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0011458\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0037\": {\n",
      "                    \"subject\": \"MONDO:0044637\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0011968\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 13.869526371959132,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001337\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
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      "                \"e0039\": {\n",
      "                    \"subject\": \"MONDO:0044637\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001337\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0057\": {\n",
      "                    \"subject\": \"MONDO:0957203\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:score\",\n",
      "                            \"value\": 12.016015777609521,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:support_graphs\",\n",
      "                            \"value\": [\n",
      "                                \"sg-e0057\"\n",
      "                            ],\n",
      "                            \"value_type_id\": \"linkml:String\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0043\": {\n",
      "                    \"subject\": \"HP:0000739\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 17.191454466846494,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000739\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0044\": {\n",
      "                    \"subject\": \"MONDO:0957203\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
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      "                \"e0045\": {\n",
      "                    \"subject\": \"HP:0000750\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 14.869526371959132,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000750\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0046\": {\n",
      "                    \"subject\": \"MONDO:0957203\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
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      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0047\": {\n",
      "                    \"subject\": \"HP:0001250\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 9.748510970997767,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001250\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0048\": {\n",
      "                    \"subject\": \"MONDO:0957203\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0049\": {\n",
      "                    \"subject\": \"HP:0001257\",\n",
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      "                    \"object\": \"HP:0001252\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.519029124874999,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0003808\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0050\": {\n",
      "                    \"subject\": \"MONDO:0957203\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001257\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0051\": {\n",
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      "                    \"object\": \"HP:0001288\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.982001101217545,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001288\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0052\": {\n",
      "                    \"subject\": \"MONDO:0957203\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002317\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                },\n",
      "                \"e0053\": {\n",
      "                    \"subject\": \"HP:0011968\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0002019\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.284563871237976,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0011458\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0054\": {\n",
      "                    \"subject\": \"MONDO:0957203\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0011968\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                },\n",
      "                \"e0055\": {\n",
      "                    \"subject\": \"HP:0034295\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0007146\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 11.477208949180373,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0010993\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0056\": {\n",
      "                    \"subject\": \"MONDO:0957203\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0034295\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0070\": {\n",
      "                    \"subject\": \"MONDO:0008590\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:score\",\n",
      "                            \"value\": 11.989449318044176,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:support_graphs\",\n",
      "                            \"value\": [\n",
      "                                \"sg-e0070\"\n",
      "                            ],\n",
      "                            \"value_type_id\": \"linkml:String\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0066\": {\n",
      "                    \"subject\": \"HP:0002378\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0002378\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 18.191454466846494,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0002378\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0067\": {\n",
      "                    \"subject\": \"MONDO:0008590\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002378\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0060\": {\n",
      "                    \"subject\": \"HP:0001260\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.732022848209198,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0002167\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0061\": {\n",
      "                    \"subject\": \"MONDO:0008590\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001260\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0062\": {\n",
      "                    \"subject\": \"HP:0002345\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 7.556643416674778,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0012638\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0063\": {\n",
      "                    \"subject\": \"MONDO:0008590\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002345\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                },\n",
      "                \"e0068\": {\n",
      "                    \"subject\": \"HP:0002174\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0007146\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 6.650842058596965,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000707\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0069\": {\n",
      "                    \"subject\": \"MONDO:0008590\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002174\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0085\": {\n",
      "                    \"subject\": \"MONDO:0010313\",\n",
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      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:score\",\n",
      "                            \"value\": 11.940112687712082,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:support_graphs\",\n",
      "                            \"value\": [\n",
      "                                \"sg-e0085\"\n",
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      "                            \"value_type_id\": \"linkml:String\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0071\": {\n",
      "                    \"subject\": \"HP:0000739\",\n",
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      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 17.191454466846494,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000739\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0072\": {\n",
      "                    \"subject\": \"MONDO:0010313\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0073\": {\n",
      "                    \"subject\": \"HP:0000750\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 14.869526371959132,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000750\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
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      "                \"e0074\": {\n",
      "                    \"subject\": \"MONDO:0010313\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                },\n",
      "                \"e0075\": {\n",
      "                    \"subject\": \"HP:0001252\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0001252\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 14.38409954478889,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001252\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0076\": {\n",
      "                    \"subject\": \"MONDO:0010313\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001252\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0081\": {\n",
      "                    \"subject\": \"HP:0001347\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0002378\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 10.416667407245322,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0100022\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0082\": {\n",
      "                    \"subject\": \"MONDO:0010313\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001347\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0079\": {\n",
      "                    \"subject\": \"HP:0000729\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0002019\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 5.132448071645384,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"UPHENO:0002332\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0080\": {\n",
      "                    \"subject\": \"MONDO:0010313\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000729\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                },\n",
      "                \"e0083\": {\n",
      "                    \"subject\": \"HP:0000252\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0007146\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 10.098697325926643,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0002060\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0084\": {\n",
      "                    \"subject\": \"MONDO:0010313\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000252\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0102\": {\n",
      "                    \"subject\": \"MONDO:0859257\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:score\",\n",
      "                            \"value\": 11.915884368866529,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:support_graphs\",\n",
      "                            \"value\": [\n",
      "                                \"sg-e0102\"\n",
      "                            ],\n",
      "                            \"value_type_id\": \"linkml:String\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0086\": {\n",
      "                    \"subject\": \"HP:0001332\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 8.693602629895377,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000708\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0087\": {\n",
      "                    \"subject\": \"MONDO:0859257\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001332\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0088\": {\n",
      "                    \"subject\": \"HP:0000750\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 14.869526371959132,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000750\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0089\": {\n",
      "                    \"subject\": \"MONDO:0859257\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0090\": {\n",
      "                    \"subject\": \"HP:0002069\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 9.748510970997767,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001250\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0091\": {\n",
      "                    \"subject\": \"MONDO:0859257\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002069\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0092\": {\n",
      "                    \"subject\": \"HP:0002063\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0001252\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.519029124874999,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0003808\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0093\": {\n",
      "                    \"subject\": \"MONDO:0859257\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002063\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0094\": {\n",
      "                    \"subject\": \"HP:0031825\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0001288\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.982001101217545,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001288\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0095\": {\n",
      "                    \"subject\": \"MONDO:0859257\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0031825\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                },\n",
      "                \"e0096\": {\n",
      "                    \"subject\": \"HP:0011968\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0002019\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.284563871237976,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0011458\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0097\": {\n",
      "                    \"subject\": \"MONDO:0859257\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0011968\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0098\": {\n",
      "                    \"subject\": \"HP:0002174\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0002378\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 13.869526371959132,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001337\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0099\": {\n",
      "                    \"subject\": \"MONDO:0859257\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002174\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0100\": {\n",
      "                    \"subject\": \"HP:0034316\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0007146\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.833902462228412,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0002134\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0101\": {\n",
      "                    \"subject\": \"MONDO:0859257\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0034316\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0113\": {\n",
      "                    \"subject\": \"MONDO:0013708\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:score\",\n",
      "                            \"value\": 11.888120701586349,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:support_graphs\",\n",
      "                            \"value\": [\n",
      "                                \"sg-e0113\"\n",
      "                            ],\n",
      "                            \"value_type_id\": \"linkml:String\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0103\": {\n",
      "                    \"subject\": \"HP:0000739\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 17.191454466846494,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000739\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0104\": {\n",
      "                    \"subject\": \"MONDO:0013708\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0105\": {\n",
      "                    \"subject\": \"HP:0000750\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 14.869526371959132,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000750\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0106\": {\n",
      "                    \"subject\": \"MONDO:0013708\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0107\": {\n",
      "                    \"subject\": \"HP:0002342\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 7.556643416674778,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0012638\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0108\": {\n",
      "                    \"subject\": \"MONDO:0013708\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002342\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0111\": {\n",
      "                    \"subject\": \"HP:0001270\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0002019\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 5.132448071645384,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"UPHENO:0002332\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0112\": {\n",
      "                    \"subject\": \"MONDO:0013708\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001270\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0128\": {\n",
      "                    \"subject\": \"MONDO:0859211\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:score\",\n",
      "                            \"value\": 11.838198857289107,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:support_graphs\",\n",
      "                            \"value\": [\n",
      "                                \"sg-e0128\"\n",
      "                            ],\n",
      "                            \"value_type_id\": \"linkml:String\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0114\": {\n",
      "                    \"subject\": \"HP:0000739\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 17.191454466846494,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000739\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0115\": {\n",
      "                    \"subject\": \"MONDO:0859211\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0116\": {\n",
      "                    \"subject\": \"HP:0000750\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 14.869526371959132,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000750\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0117\": {\n",
      "                    \"subject\": \"MONDO:0859211\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0118\": {\n",
      "                    \"subject\": \"HP:0001263\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
      "                            ]\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 7.556643416674778,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0012638\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0119\": {\n",
      "                    \"subject\": \"MONDO:0859211\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001263\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
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      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0120\": {\n",
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      "                    \"object\": \"HP:0001252\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 14.38409954478889,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001252\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0121\": {\n",
      "                    \"subject\": \"MONDO:0859211\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0008936\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
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      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                    \"object\": \"HP:0001288\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 10.416667407245322,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0100022\",\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0123\": {\n",
      "                    \"subject\": \"MONDO:0859211\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001332\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                    \"sources\": [\n",
      "                        {\n",
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      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 13.869526371959132,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001337\",\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0125\": {\n",
      "                    \"subject\": \"MONDO:0859211\",\n",
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      "                    \"object\": \"HP:0001337\",\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
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      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0126\": {\n",
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      "                    \"object\": \"HP:0007146\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:semsimian-kp\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 11.477208949180373,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0010993\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0127\": {\n",
      "                    \"subject\": \"MONDO:0859211\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0033725\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
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      "                },\n",
      "                \"e0143\": {\n",
      "                    \"subject\": \"MONDO:0020762\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                                \"infores:upheno\"\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:score\",\n",
      "                            \"value\": 11.835866208806532,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:support_graphs\",\n",
      "                            \"value\": [\n",
      "                                \"sg-e0143\"\n",
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      "                            \"value_type_id\": \"linkml:String\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0131\": {\n",
      "                    \"subject\": \"HP:0001344\",\n",
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      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
      "                        }\n",
      "                    ],\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 14.869526371959132,\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000750\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0132\": {\n",
      "                    \"subject\": \"MONDO:0020762\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001344\",\n",
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      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0133\": {\n",
      "                    \"subject\": \"HP:0001332\",\n",
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      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                                \"infores:upheno\"\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 7.556643416674778,\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0012638\",\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
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      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0134\": {\n",
      "                    \"subject\": \"MONDO:0020762\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001332\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                    \"sources\": [\n",
      "                        {\n",
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      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.519029124874999,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0003808\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
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      "                \"e0136\": {\n",
      "                    \"subject\": \"MONDO:0020762\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002510\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0137\": {\n",
      "                    \"subject\": \"HP:0002540\",\n",
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      "                    \"object\": \"HP:0001288\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.982001101217545,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001288\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0138\": {\n",
      "                    \"subject\": \"MONDO:0020762\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002540\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
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      "                    \"sources\": [\n",
      "                        {\n",
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      "                        {\n",
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      "                        {\n",
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      "                            \"value\": \"HP:0011458\",\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0140\": {\n",
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      "                        {\n",
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      "                        },\n",
      "                        {\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
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      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
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      "                    \"sources\": [\n",
      "                        {\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"value\": 12.833902462228412,\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0002134\",\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0142\": {\n",
      "                    \"subject\": \"MONDO:0020762\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0002134\",\n",
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      "                        {\n",
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      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            ]\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
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      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0158\": {\n",
      "                    \"subject\": \"MONDO:0020846\",\n",
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      "                    \"object\": \"uuid:1\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
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      "                                \"infores:upheno\"\n",
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      "                        {\n",
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      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
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      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:score\",\n",
      "                            \"value\": 11.71849075169778,\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:support_graphs\",\n",
      "                            \"value\": [\n",
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      "                            \"value_type_id\": \"linkml:String\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\",\n",
      "                            \"original_attribute_name\": \"\"\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0144\": {\n",
      "                    \"subject\": \"HP:0000718\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0000739\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\",\n",
      "                                \"infores:upheno\"\n",
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      "                        {\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 12.732022848209198,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:match\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0100851\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
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      "                \"e0145\": {\n",
      "                    \"subject\": \"MONDO:0020846\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000718\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0146\": {\n",
      "                    \"subject\": \"HP:0001344\",\n",
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      "                    \"object\": \"HP:0000750\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
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      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
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      "                    \"attributes\": [\n",
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      "                            \"attribute_type_id\": \"biolink:score\",\n",
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      "                            \"value\": 14.869526371959132,\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
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      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0000750\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0147\": {\n",
      "                    \"subject\": \"MONDO:0020846\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001344\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
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      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0148\": {\n",
      "                    \"subject\": \"HP:0001250\",\n",
      "                    \"predicate\": \"biolink:similar_to\",\n",
      "                    \"object\": \"HP:0001250\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 9.748510970997767,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0001250\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0149\": {\n",
      "                    \"subject\": \"MONDO:0020846\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
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      "                        },\n",
      "                        {\n",
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      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
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      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                    \"sources\": [\n",
      "                        {\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                            \"attribute_type_id\": \"biolink:score\",\n",
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      "                            \"value\": 12.519029124874999,\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0003808\",\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0151\": {\n",
      "                    \"subject\": \"MONDO:0020846\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0001257\",\n",
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      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
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      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
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      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                        {\n",
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      "                    \"sources\": [\n",
      "                        {\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                            \"attribute_type_id\": \"biolink:score\",\n",
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      "                            \"value\": \"HP:0011458\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0153\": {\n",
      "                    \"subject\": \"MONDO:0020846\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0011968\",\n",
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      "                        {\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
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      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                    \"sources\": [\n",
      "                        {\n",
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      "                            \"source_record_urls\": null,\n",
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      "                                \"infores:upheno\"\n",
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      "                        },\n",
      "                        {\n",
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      "                            \"source_record_urls\": null,\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
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      "                    \"attributes\": [\n",
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      "                            \"attribute_type_id\": \"biolink:score\",\n",
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      "                            \"value\": 10.75682623920977,\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
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      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0011442\",\n",
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      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
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      "                \"e0155\": {\n",
      "                    \"subject\": \"MONDO:0020846\",\n",
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      "                    \"object\": \"HP:0001350\",\n",
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      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
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      "                            \"upstream_resource_ids\": [\n",
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      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
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      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
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      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
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      "                \"e0156\": {\n",
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      "                    \"object\": \"HP:0007146\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:semsimian-kp\",\n",
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      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                                \"infores:upheno\"\n",
      "                            ]\n",
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      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"supporting_data_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:upheno\",\n",
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      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
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      "                            ]\n",
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      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:score\",\n",
      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.score\",\n",
      "                            \"value\": 10.098697325926643,\n",
      "                            \"value_type_id\": \"linkml:Float\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
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      "                            \"original_attribute_name\": \"semsimian:object_best_matches.*.similarity.ancestor_id\",\n",
      "                            \"value\": \"HP:0002060\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:semsimian-kp\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"e0157\": {\n",
      "                    \"subject\": \"MONDO:0020846\",\n",
      "                    \"predicate\": \"biolink:has_phenotype\",\n",
      "                    \"object\": \"HP:0000252\",\n",
      "                    \"sources\": [\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:hpo-annotations\",\n",
      "                            \"resource_role\": \"primary_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": null\n",
      "                        },\n",
      "                        {\n",
      "                            \"resource_id\": \"infores:monarchinitiative\",\n",
      "                            \"resource_role\": \"aggregator_knowledge_source\",\n",
      "                            \"source_record_urls\": null,\n",
      "                            \"upstream_resource_ids\": [\n",
      "                                \"infores:hpo-annotations\"\n",
      "                            ]\n",
      "                        }\n",
      "                    ],\n",
      "                    \"attributes\": [\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:has_evidence\",\n",
      "                            \"value\": \"ECO:0000304\",\n",
      "                            \"value_type_id\": \"linkml:Uriorcurie\",\n",
      "                            \"attribute_source\": \"infores:hpo-annotations\",\n",
      "                            \"original_attribute_name\": \"\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:agent_type\",\n",
      "                            \"value\": \"automated_agent\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        },\n",
      "                        {\n",
      "                            \"attribute_type_id\": \"biolink:knowledge_level\",\n",
      "                            \"value\": \"knowledge_assertion\",\n",
      "                            \"original_attribute_name\": \"\",\n",
      "                            \"value_type_id\": \"EDAM:data_0006\"\n",
      "                        }\n",
      "                    ]\n",
      "                }\n",
      "            }\n",
      "        },\n",
      "        \"results\": [\n",
      "            {\n",
      "                \"node_bindings\": {\n",
      "                    \"input\": [\n",
      "                        {\n",
      "                            \"id\": \"uuid:1\"\n",
      "                        }\n",
      "                    ],\n",
      "                    \"output\": [\n",
      "                        {\n",
      "                            \"id\": \"MONDO:0007496\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"analyses\": [\n",
      "                    {\n",
      "                        \"resource_id\": \"infores:monarchinitiative\",\n",
      "                        \"edge_bindings\": {\n",
      "                            \"e01\": [\n",
      "                                {\n",
      "                                    \"id\": \"e0025\"\n",
      "                                }\n",
      "                            ]\n",
      "                        }\n",
      "                    }\n",
      "                ]\n",
      "            },\n",
      "            {\n",
      "                \"node_bindings\": {\n",
      "                    \"input\": [\n",
      "                        {\n",
      "                            \"id\": \"uuid:1\"\n",
      "                        }\n",
      "                    ],\n",
      "                    \"output\": [\n",
      "                        {\n",
      "                            \"id\": \"MONDO:0044637\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"analyses\": [\n",
      "                    {\n",
      "                        \"resource_id\": \"infores:monarchinitiative\",\n",
      "                        \"edge_bindings\": {\n",
      "                            \"e01\": [\n",
      "                                {\n",
      "                                    \"id\": \"e0042\"\n",
      "                                }\n",
      "                            ]\n",
      "                        }\n",
      "                    }\n",
      "                ]\n",
      "            },\n",
      "            {\n",
      "                \"node_bindings\": {\n",
      "                    \"input\": [\n",
      "                        {\n",
      "                            \"id\": \"uuid:1\"\n",
      "                        }\n",
      "                    ],\n",
      "                    \"output\": [\n",
      "                        {\n",
      "                            \"id\": \"MONDO:0957203\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"analyses\": [\n",
      "                    {\n",
      "                        \"resource_id\": \"infores:monarchinitiative\",\n",
      "                        \"edge_bindings\": {\n",
      "                            \"e01\": [\n",
      "                                {\n",
      "                                    \"id\": \"e0057\"\n",
      "                                }\n",
      "                            ]\n",
      "                        }\n",
      "                    }\n",
      "                ]\n",
      "            },\n",
      "            {\n",
      "                \"node_bindings\": {\n",
      "                    \"input\": [\n",
      "                        {\n",
      "                            \"id\": \"uuid:1\"\n",
      "                        }\n",
      "                    ],\n",
      "                    \"output\": [\n",
      "                        {\n",
      "                            \"id\": \"MONDO:0008590\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"analyses\": [\n",
      "                    {\n",
      "                        \"resource_id\": \"infores:monarchinitiative\",\n",
      "                        \"edge_bindings\": {\n",
      "                            \"e01\": [\n",
      "                                {\n",
      "                                    \"id\": \"e0070\"\n",
      "                                }\n",
      "                            ]\n",
      "                        }\n",
      "                    }\n",
      "                ]\n",
      "            },\n",
      "            {\n",
      "                \"node_bindings\": {\n",
      "                    \"input\": [\n",
      "                        {\n",
      "                            \"id\": \"uuid:1\"\n",
      "                        }\n",
      "                    ],\n",
      "                    \"output\": [\n",
      "                        {\n",
      "                            \"id\": \"MONDO:0010313\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"analyses\": [\n",
      "                    {\n",
      "                        \"resource_id\": \"infores:monarchinitiative\",\n",
      "                        \"edge_bindings\": {\n",
      "                            \"e01\": [\n",
      "                                {\n",
      "                                    \"id\": \"e0085\"\n",
      "                                }\n",
      "                            ]\n",
      "                        }\n",
      "                    }\n",
      "                ]\n",
      "            },\n",
      "            {\n",
      "                \"node_bindings\": {\n",
      "                    \"input\": [\n",
      "                        {\n",
      "                            \"id\": \"uuid:1\"\n",
      "                        }\n",
      "                    ],\n",
      "                    \"output\": [\n",
      "                        {\n",
      "                            \"id\": \"MONDO:0859257\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"analyses\": [\n",
      "                    {\n",
      "                        \"resource_id\": \"infores:monarchinitiative\",\n",
      "                        \"edge_bindings\": {\n",
      "                            \"e01\": [\n",
      "                                {\n",
      "                                    \"id\": \"e0102\"\n",
      "                                }\n",
      "                            ]\n",
      "                        }\n",
      "                    }\n",
      "                ]\n",
      "            },\n",
      "            {\n",
      "                \"node_bindings\": {\n",
      "                    \"input\": [\n",
      "                        {\n",
      "                            \"id\": \"uuid:1\"\n",
      "                        }\n",
      "                    ],\n",
      "                    \"output\": [\n",
      "                        {\n",
      "                            \"id\": \"MONDO:0013708\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"analyses\": [\n",
      "                    {\n",
      "                        \"resource_id\": \"infores:monarchinitiative\",\n",
      "                        \"edge_bindings\": {\n",
      "                            \"e01\": [\n",
      "                                {\n",
      "                                    \"id\": \"e0113\"\n",
      "                                }\n",
      "                            ]\n",
      "                        }\n",
      "                    }\n",
      "                ]\n",
      "            },\n",
      "            {\n",
      "                \"node_bindings\": {\n",
      "                    \"input\": [\n",
      "                        {\n",
      "                            \"id\": \"uuid:1\"\n",
      "                        }\n",
      "                    ],\n",
      "                    \"output\": [\n",
      "                        {\n",
      "                            \"id\": \"MONDO:0859211\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"analyses\": [\n",
      "                    {\n",
      "                        \"resource_id\": \"infores:monarchinitiative\",\n",
      "                        \"edge_bindings\": {\n",
      "                            \"e01\": [\n",
      "                                {\n",
      "                                    \"id\": \"e0128\"\n",
      "                                }\n",
      "                            ]\n",
      "                        }\n",
      "                    }\n",
      "                ]\n",
      "            },\n",
      "            {\n",
      "                \"node_bindings\": {\n",
      "                    \"input\": [\n",
      "                        {\n",
      "                            \"id\": \"uuid:1\"\n",
      "                        }\n",
      "                    ],\n",
      "                    \"output\": [\n",
      "                        {\n",
      "                            \"id\": \"MONDO:0020762\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"analyses\": [\n",
      "                    {\n",
      "                        \"resource_id\": \"infores:monarchinitiative\",\n",
      "                        \"edge_bindings\": {\n",
      "                            \"e01\": [\n",
      "                                {\n",
      "                                    \"id\": \"e0143\"\n",
      "                                }\n",
      "                            ]\n",
      "                        }\n",
      "                    }\n",
      "                ]\n",
      "            },\n",
      "            {\n",
      "                \"node_bindings\": {\n",
      "                    \"input\": [\n",
      "                        {\n",
      "                            \"id\": \"uuid:1\"\n",
      "                        }\n",
      "                    ],\n",
      "                    \"output\": [\n",
      "                        {\n",
      "                            \"id\": \"MONDO:0020846\"\n",
      "                        }\n",
      "                    ]\n",
      "                },\n",
      "                \"analyses\": [\n",
      "                    {\n",
      "                        \"resource_id\": \"infores:monarchinitiative\",\n",
      "                        \"edge_bindings\": {\n",
      "                            \"e01\": [\n",
      "                                {\n",
      "                                    \"id\": \"e0158\"\n",
      "                                }\n",
      "                            ]\n",
      "                        }\n",
      "                    }\n",
      "                ]\n",
      "            }\n",
      "        ],\n",
      "        \"auxiliary_graphs\": {\n",
      "            \"sg-e0025\": {\n",
      "                \"edges\": [\n",
      "                    \"e0009\",\n",
      "                    \"e0010\",\n",
      "                    \"e0001\",\n",
      "                    \"e0011\",\n",
      "                    \"e0012\",\n",
      "                    \"e0005\",\n",
      "                    \"e0013\",\n",
      "                    \"e0014\",\n",
      "                    \"e0004\",\n",
      "                    \"e0015\",\n",
      "                    \"e0016\",\n",
      "                    \"e0003\",\n",
      "                    \"e0017\",\n",
      "                    \"e0018\",\n",
      "                    \"e0002\",\n",
      "                    \"e0019\",\n",
      "                    \"e0020\",\n",
      "                    \"e0007\",\n",
      "                    \"e0021\",\n",
      "                    \"e0022\",\n",
      "                    \"e0006\",\n",
      "                    \"e0023\",\n",
      "                    \"e0024\",\n",
      "                    \"e0008\"\n",
      "                ]\n",
      "            },\n",
      "            \"sg-e0042\": {\n",
      "                \"edges\": [\n",
      "                    \"e0040\",\n",
      "                    \"e0041\",\n",
      "                    \"e0008\",\n",
      "                    \"e0028\",\n",
      "                    \"e0029\",\n",
      "                    \"e0005\",\n",
      "                    \"e0030\",\n",
      "                    \"e0031\",\n",
      "                    \"e0004\",\n",
      "                    \"e0032\",\n",
      "                    \"e0033\",\n",
      "                    \"e0003\",\n",
      "                    \"e0034\",\n",
      "                    \"e0035\",\n",
      "                    \"e0002\",\n",
      "                    \"e0036\",\n",
      "                    \"e0037\",\n",
      "                    \"e0007\",\n",
      "                    \"e0038\",\n",
      "                    \"e0039\",\n",
      "                    \"e0006\"\n",
      "                ]\n",
      "            },\n",
      "            \"sg-e0057\": {\n",
      "                \"edges\": [\n",
      "                    \"e0043\",\n",
      "                    \"e0044\",\n",
      "                    \"e0001\",\n",
      "                    \"e0045\",\n",
      "                    \"e0046\",\n",
      "                    \"e0005\",\n",
      "                    \"e0047\",\n",
      "                    \"e0048\",\n",
      "                    \"e0004\",\n",
      "                    \"e0049\",\n",
      "                    \"e0050\",\n",
      "                    \"e0003\",\n",
      "                    \"e0051\",\n",
      "                    \"e0052\",\n",
      "                    \"e0002\",\n",
      "                    \"e0053\",\n",
      "                    \"e0054\",\n",
      "                    \"e0007\",\n",
      "                    \"e0055\",\n",
      "                    \"e0056\",\n",
      "                    \"e0008\"\n",
      "                ]\n",
      "            },\n",
      "            \"sg-e0070\": {\n",
      "                \"edges\": [\n",
      "                    \"e0066\",\n",
      "                    \"e0067\",\n",
      "                    \"e0006\",\n",
      "                    \"e0060\",\n",
      "                    \"e0061\",\n",
      "                    \"e0005\",\n",
      "                    \"e0062\",\n",
      "                    \"e0063\",\n",
      "                    \"e0004\",\n",
      "                    \"e0068\",\n",
      "                    \"e0069\",\n",
      "                    \"e0008\"\n",
      "                ]\n",
      "            },\n",
      "            \"sg-e0085\": {\n",
      "                \"edges\": [\n",
      "                    \"e0071\",\n",
      "                    \"e0072\",\n",
      "                    \"e0001\",\n",
      "                    \"e0073\",\n",
      "                    \"e0074\",\n",
      "                    \"e0005\",\n",
      "                    \"e0075\",\n",
      "                    \"e0076\",\n",
      "                    \"e0003\",\n",
      "                    \"e0081\",\n",
      "                    \"e0082\",\n",
      "                    \"e0006\",\n",
      "                    \"e0079\",\n",
      "                    \"e0080\",\n",
      "                    \"e0007\",\n",
      "                    \"e0083\",\n",
      "                    \"e0084\",\n",
      "                    \"e0008\"\n",
      "                ]\n",
      "            },\n",
      "            \"sg-e0102\": {\n",
      "                \"edges\": [\n",
      "                    \"e0086\",\n",
      "                    \"e0087\",\n",
      "                    \"e0001\",\n",
      "                    \"e0088\",\n",
      "                    \"e0089\",\n",
      "                    \"e0005\",\n",
      "                    \"e0090\",\n",
      "                    \"e0091\",\n",
      "                    \"e0004\",\n",
      "                    \"e0092\",\n",
      "                    \"e0093\",\n",
      "                    \"e0003\",\n",
      "                    \"e0094\",\n",
      "                    \"e0095\",\n",
      "                    \"e0002\",\n",
      "                    \"e0096\",\n",
      "                    \"e0097\",\n",
      "                    \"e0007\",\n",
      "                    \"e0098\",\n",
      "                    \"e0099\",\n",
      "                    \"e0006\",\n",
      "                    \"e0100\",\n",
      "                    \"e0101\",\n",
      "                    \"e0008\"\n",
      "                ]\n",
      "            },\n",
      "            \"sg-e0113\": {\n",
      "                \"edges\": [\n",
      "                    \"e0103\",\n",
      "                    \"e0104\",\n",
      "                    \"e0001\",\n",
      "                    \"e0105\",\n",
      "                    \"e0106\",\n",
      "                    \"e0005\",\n",
      "                    \"e0107\",\n",
      "                    \"e0108\",\n",
      "                    \"e0004\",\n",
      "                    \"e0111\",\n",
      "                    \"e0112\",\n",
      "                    \"e0007\"\n",
      "                ]\n",
      "            },\n",
      "            \"sg-e0128\": {\n",
      "                \"edges\": [\n",
      "                    \"e0114\",\n",
      "                    \"e0115\",\n",
      "                    \"e0001\",\n",
      "                    \"e0116\",\n",
      "                    \"e0117\",\n",
      "                    \"e0005\",\n",
      "                    \"e0118\",\n",
      "                    \"e0119\",\n",
      "                    \"e0004\",\n",
      "                    \"e0120\",\n",
      "                    \"e0121\",\n",
      "                    \"e0003\",\n",
      "                    \"e0122\",\n",
      "                    \"e0123\",\n",
      "                    \"e0002\",\n",
      "                    \"e0124\",\n",
      "                    \"e0125\",\n",
      "                    \"e0006\",\n",
      "                    \"e0126\",\n",
      "                    \"e0127\",\n",
      "                    \"e0008\"\n",
      "                ]\n",
      "            },\n",
      "            \"sg-e0143\": {\n",
      "                \"edges\": [\n",
      "                    \"e0131\",\n",
      "                    \"e0132\",\n",
      "                    \"e0005\",\n",
      "                    \"e0133\",\n",
      "                    \"e0134\",\n",
      "                    \"e0004\",\n",
      "                    \"e0135\",\n",
      "                    \"e0136\",\n",
      "                    \"e0003\",\n",
      "                    \"e0137\",\n",
      "                    \"e0138\",\n",
      "                    \"e0002\",\n",
      "                    \"e0139\",\n",
      "                    \"e0140\",\n",
      "                    \"e0007\",\n",
      "                    \"e0141\",\n",
      "                    \"e0142\",\n",
      "                    \"e0008\"\n",
      "                ]\n",
      "            },\n",
      "            \"sg-e0158\": {\n",
      "                \"edges\": [\n",
      "                    \"e0144\",\n",
      "                    \"e0145\",\n",
      "                    \"e0001\",\n",
      "                    \"e0146\",\n",
      "                    \"e0147\",\n",
      "                    \"e0005\",\n",
      "                    \"e0148\",\n",
      "                    \"e0149\",\n",
      "                    \"e0004\",\n",
      "                    \"e0150\",\n",
      "                    \"e0151\",\n",
      "                    \"e0003\",\n",
      "                    \"e0152\",\n",
      "                    \"e0153\",\n",
      "                    \"e0007\",\n",
      "                    \"e0154\",\n",
      "                    \"e0155\",\n",
      "                    \"e0006\",\n",
      "                    \"e0156\",\n",
      "                    \"e0157\",\n",
      "                    \"e0008\"\n",
      "                ]\n",
      "            }\n",
      "        }\n",
      "    },\n",
      "    \"log_level\": null,\n",
      "    \"workflow\": [\n",
      "        {\n",
      "            \"id\": \"lookup\",\n",
      "            \"parameters\": null,\n",
      "            \"runner_parameters\": null\n",
      "        }\n",
      "    ],\n",
      "    \"bypass_cache\": null\n",
      "}\n"
     ]
    }
   ],
   "source": [
    "print(json.dumps(response, indent=4))"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:26.899017Z",
     "start_time": "2024-06-05T20:33:26.869569Z"
    }
   },
   "id": "e5a1fcde4b7a6677",
   "execution_count": 12
  },
  {
   "cell_type": "markdown",
   "source": [
    "### List of Diseases Matched"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "2b0c34dc9bc2b623"
  },
  {
   "cell_type": "code",
   "execution_count": 13,
   "id": "367042ff-94bd-47e6-a715-d760ec46a5ca",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:26.960843Z",
     "start_time": "2024-06-05T20:33:26.900034Z"
    }
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "MONDO:0007496 dystonia 12\n",
      "MONDO:0044637 infantile-onset generalized dyskinesia with orofacial involvement\n",
      "MONDO:0957203 intellectual developmental disorder, X-linked 111\n",
      "MONDO:0008590 tremor, hereditary essential, 1\n",
      "MONDO:0010313 intellectual disability, X-linked 63\n",
      "MONDO:0859257 intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism\n",
      "MONDO:0013708 intellectual disability, autosomal recessive 25\n",
      "MONDO:0859211 neurodevelopmental disorder with hyperkinetic movements and dyskinesia\n",
      "MONDO:0020762 diencephalic-mesencephalic junction dysplasia syndrome 2\n",
      "MONDO:0020846 intellectual disability, autosomal recessive 64\n"
     ]
    }
   ],
   "source": [
    "print_results(response)"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'ALL'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "2910581172a98747"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0007496 dystonia 12\n",
      "MONDO:0044637 infantile-onset generalized dyskinesia with orofacial involvement\n",
      "MONDO:0859211 neurodevelopmental disorder with hyperkinetic movements and dyskinesia\n",
      "MONDO:0020846 intellectual disability, autosomal recessive 64\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(leigh_phenotypes, set_interpretation='ALL')\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:29.543834Z",
     "start_time": "2024-06-05T20:33:26.961878Z"
    }
   },
   "id": "b8f5fbe0269988d0",
   "execution_count": 14
  },
  {
   "cell_type": "code",
   "execution_count": 15,
   "id": "ba572bcf-889c-42c7-8b22-f9026cf07b6a",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:29.559125Z",
     "start_time": "2024-06-05T20:33:29.545466Z"
    }
   },
   "outputs": [],
   "source": [
    "# See above, 'phenotypes to gene' matching is not yet implemented in MMCQ\n",
    "# response = phenotypes_to_gene(leigh_phenotypes)\n",
    "# print_results(response)"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "## Sotos-2 (Malan syndrome)"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "85c3900b7597e455"
  },
  {
   "cell_type": "code",
   "execution_count": 16,
   "id": "954c7c16-6eb7-4dd7-918b-7001fb59cf9b",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:29.636219Z",
     "start_time": "2024-06-05T20:33:29.560127Z"
    }
   },
   "outputs": [],
   "source": [
    "sotos_2_phenotypes = [\n",
    "    \"HP:0000718\", # aggression         | 2 yrs - present\n",
    "    \"HP:0000739\", #anxiety                | 2 yrs - present\n",
    "    \"HP:0002616\", # Aortic root aneurysm HP:0002616 | 10 yrs - present\n",
    "    \"HP:0002019\", #constipation (occasional) HP:0002019 |        birth - present\n",
    "    #occasional bright lime-green stool | 5 yrs - present\n",
    "    \"HP:0000678\", #crowded teeth        HP:0000678         \n",
    "    \"HP:0000886\", # Deformed rib cage HP:0000886 | 6 months - present\n",
    "    \"HP:0002046\", #heat intolerance        HP:0002046 \n",
    "    \"HP:0002705\", #high arched palate        HP:0002705 \n",
    "    \"HP:0001290\", #hypotonia        HP:0001290 |        birth - present\n",
    "    \"HP:0000737\", # irritable        HP:0000737 |        2 yrs - present\n",
    "    \"HP:0001382\", # Joint hypermobility HP:0001382 | birth - present\n",
    "    \"HP:0000720\", # mood swings        HP:0000720 |        2 yrs - present\n",
    "    \"HP:0012801\", # narrow jaw        HP:0012801\n",
    "    \"HP:0010865\", # Oppositional defiant disorder HP:0010865 | 2 yrs - present\n",
    "    #Destructive tendencies | 3 yrs - present\n",
    "    \"HP:0002172\", # Postural instability HP:0002172 | birth - present\n",
    "    \"HP:0001250\", # seizures        HP:0001250 |        7 yrs - present\n",
    "    \"HP:0001649\", # Tachycardia HP:0001649 | 1 yr - present\n",
    "    \"HP:0001337\", # tremor        HP:0001337 | in hands 11 yrs - present\n",
    "    #Vascular skin abnormality (superficial blood vessels that rupture easily) HP:0011276 |  birth - present\n",
    "    \"HP:0001123\" # Visual field defect HP:0001123 | birth - present\n",
    "    # Seasonal allergies | birth - present\n",
    "    #Food allergy | 4 yrs - present\n",
    "]"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'MANY'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "5bde45f225b477cd"
  },
  {
   "cell_type": "code",
   "execution_count": 17,
   "id": "ce04922a-36c7-4db8-b8c7-850152eaa54b",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:33.335674Z",
     "start_time": "2024-06-05T20:33:29.637221Z"
    }
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0017782 developmental and speech delay due to SOX5 deficiency\n",
      "MONDO:0018670 symptomatic form of fragile X syndrome in female carrier\n",
      "MONDO:0014950 aortic aneurysm, familial thoracic 10\n",
      "MONDO:0030051 intellectual developmental disorder with autistic features and language delay, with or without seizures\n",
      "MONDO:0007496 dystonia 12\n",
      "MONDO:0957576 parkinson disease 25, autosomal recessive early-onset, with impaired intellectual development\n",
      "MONDO:0017279 young-onset Parkinson disease\n",
      "MONDO:0018546 serotonin syndrome\n",
      "MONDO:0016305 atypical pantothenate kinase-associated neurodegeneration\n",
      "MONDO:0032698 neurodevelopmental disorder with central and peripheral motor dysfunction\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(sotos_2_phenotypes)\n",
    "print_results(response)"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'ALL'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "153bb26f38a76233"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(sotos_2_phenotypes,set_interpretation='ALL')\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:37.131869Z",
     "start_time": "2024-06-05T20:33:33.336720Z"
    }
   },
   "id": "5c2ef227f40a573b",
   "execution_count": 18
  },
  {
   "cell_type": "code",
   "execution_count": 19,
   "id": "e4847942-1ae6-48cc-9355-edd1f4fbffeb",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:37.147019Z",
     "start_time": "2024-06-05T20:33:37.133404Z"
    }
   },
   "outputs": [],
   "source": [
    "# response = phenotypes_to_gene(phenotypes_2)\n",
    "# print_results(response)"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "## TBCD"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "485ee3bac4a13a86"
  },
  {
   "cell_type": "code",
   "execution_count": 20,
   "id": "050880bb-5140-4962-9a4c-d22c929c55a1",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:37.210035Z",
     "start_time": "2024-06-05T20:33:37.148054Z"
    }
   },
   "outputs": [],
   "source": [
    "tbcd_phenotypes=[\n",
    "    \"HP:0002098\", # | Respiratory distress, \n",
    "    \"HP:0001252\", # | Hypotonia, \n",
    "    \"HP:0001250\" # | Seizure\n",
    "]"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'MANY'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "336db6d1f78b765b"
  },
  {
   "cell_type": "code",
   "execution_count": 21,
   "id": "6b1f0e68-0811-4032-b5f0-022d84192745",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:39.663574Z",
     "start_time": "2024-06-05T20:33:37.211138Z"
    }
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0017049 obsolete hypomyelination neuropathy-arthrogryposis syndrome\n",
      "MONDO:0024508 epilepsy, hot water, 1\n",
      "MONDO:0014582 congenital myasthenic syndrome 2C\n",
      "MONDO:0017856 X-linked spasticity-intellectual disability-epilepsy syndrome\n",
      "MONDO:0007147 obstructive sleep apnea syndrome\n",
      "MONDO:0008845 atonic-astatic syndrome of Foerster\n",
      "MONDO:0008027 muscular atrophy, malignant neurogenic\n",
      "MONDO:0859263 developmental delay, impaired speech, and behavioral abnormalities, with or without seizures\n",
      "MONDO:0009186 epilepsy, photogenic, with spastic diplegia and intellectual disability\n",
      "MONDO:0010451 intellectual disability, X-linked 41\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(tbcd_phenotypes)\n",
    "print_results(response)"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'ALL'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "72892727ff35e3d9"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0017049 obsolete hypomyelination neuropathy-arthrogryposis syndrome\n",
      "MONDO:0014582 congenital myasthenic syndrome 2C\n",
      "MONDO:0859263 developmental delay, impaired speech, and behavioral abnormalities, with or without seizures\n",
      "MONDO:0010451 intellectual disability, X-linked 41\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(tbcd_phenotypes,set_interpretation='ALL')\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:42.145975Z",
     "start_time": "2024-06-05T20:33:39.664625Z"
    }
   },
   "id": "96499c2f9ebffe13",
   "execution_count": 22
  },
  {
   "cell_type": "code",
   "execution_count": 23,
   "id": "1e2dc7e2-219d-4a61-9d05-2f518022dfcf",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:42.161717Z",
     "start_time": "2024-06-05T20:33:42.149090Z"
    }
   },
   "outputs": [],
   "source": [
    "# response = phenotypes_to_gene(tbcd_phenotypes)\n",
    "# print_results(response)"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "## WDFY3 mutations are associated with MICROCEPHALY 18, PRIMARY, AUTOSOMAL DOMINANT; MCPH18 (MIM 617520)"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "682c2d8aac692299"
  },
  {
   "cell_type": "code",
   "execution_count": 24,
   "id": "c7230bc3-4dd1-4bec-9ad5-a40346ce06aa",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:42.238526Z",
     "start_time": "2024-06-05T20:33:42.162754Z"
    }
   },
   "outputs": [],
   "source": [
    "wdyf_phenotypes = [\n",
    "    #Global developmental delay \n",
    "    \"HP:0001263\",\n",
    "    #Seizure \n",
    "    \"HP:0001250\",\n",
    "    #Neurodevelopmental delay \n",
    "    \"HP:0012758\",\n",
    "    #Delayed social development \n",
    "    \"HP:0012434\"\n",
    "]"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'MANY'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "2a2bf402c8617afb"
  },
  {
   "cell_type": "code",
   "execution_count": 25,
   "id": "c0e79e06-e9f7-4aec-9ae0-e03fc7c6faa1",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:44.576693Z",
     "start_time": "2024-06-05T20:33:42.240144Z"
    }
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0010450 intellectual disability, X-linked 89\n",
      "MONDO:0007366 seizures, benign familial neonatal, 2\n",
      "MONDO:0013705 intellectual disability, autosomal recessive 19\n",
      "MONDO:0030958 dystonia 35, childhood-onset\n",
      "MONDO:0010413 intellectual disability, X-linked 95\n",
      "MONDO:0013706 intellectual disability, autosomal recessive 23\n",
      "MONDO:0010454 intellectual disability, X-linked 88\n",
      "MONDO:0014815 intellectual disability, autosomal recessive 52\n",
      "MONDO:0859261 attention deficit-hyperactivity disorder 8\n",
      "MONDO:0012618 intellectual disability, autosomal recessive 10\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(wdyf_phenotypes)\n",
    "print_results(response)"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'ALL'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "2aafe95a44502b36"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(wdyf_phenotypes,set_interpretation='ALL')\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:46.816357Z",
     "start_time": "2024-06-05T20:33:44.577729Z"
    }
   },
   "id": "8e2c74cccd018b27",
   "execution_count": 26
  },
  {
   "cell_type": "code",
   "execution_count": 27,
   "id": "291818f7-0c74-48e6-8396-fd4b970cfb7a",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:46.832122Z",
     "start_time": "2024-06-05T20:33:46.817396Z"
    }
   },
   "outputs": [],
   "source": [
    "# response = phenotypes_to_gene(wdyf_phenotypes)\n",
    "# print_results(response)"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "## Recurrent fever AND 2 Gene Mutations (AFG3L2 and TNFRSF13B)"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "cd177c8b9b15cf82"
  },
  {
   "cell_type": "code",
   "execution_count": 28,
   "id": "85533c48-c88c-41d2-b0af-eea30852d0d0",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:46.910121Z",
     "start_time": "2024-06-05T20:33:46.833307Z"
    }
   },
   "outputs": [],
   "source": [
    "twogene_phenotypes = [\n",
    "    #Recurrent fever \n",
    "    \"HP:0001954\",\n",
    "    #hip dysplasia        \n",
    "    \"HP:0001385\",\n",
    "    #joint hypermobility        \n",
    "    \"HP:0001382\",\n",
    "    #optic disc pallor        \n",
    "    \"HP:0000543\",        \n",
    "    #recurrent infections        \n",
    "    \"HP:0002719\",        \n",
    "    #thin corpus callosum        \n",
    "    \"HP:0002079\",\n",
    "    #Global developmental delay \n",
    "    \"HP:0001263\",\n",
    "    #Abnormality of vision \n",
    "    \"HP:0000504\",\n",
    "    #Nystagmus \n",
    "    \"HP:0000639\",\n",
    "    #Drooling \n",
    "    \"HP:0002307\",\n",
    "    #Dysphagia \n",
    "    \"HP:0002015\",\n",
    "    #Hypotonia \n",
    "    \"HP:0001252\"\n",
    "    #Eczema \n",
    "    \"HP:0000964\",\n",
    "    #Inability to walk \n",
    "    \"HP:0002540\",\n",
    "    #Septo-optic dysplasia \n",
    "    \"HP:0100842\"\n",
    "    #Postural instability \n",
    "    \"HP:0002172\"\n",
    "]"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'MANY'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "7bee92c6af1364d0"
  },
  {
   "cell_type": "code",
   "execution_count": 29,
   "id": "37c6c855-cc09-4a2b-bfc0-4be30633c970",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:50.344759Z",
     "start_time": "2024-06-05T20:33:46.911145Z"
    }
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0859313 neurodevelopmental disorder with speech impairment and with or without seizures\n",
      "MONDO:0011897 leukoencephalopathy-ataxia-hypodontia-hypomyelination syndrome\n",
      "MONDO:0020777 congenital disorder of glycosylation with defective fucosylation 2\n",
      "MONDO:0013165 hereditary spastic paraplegia 45\n",
      "MONDO:0014979 myoclonus, intractable, neonatal\n",
      "MONDO:0859250 neurodevelopmental disorder with microcephaly, hypotonia, nystagmus, and seizures\n",
      "MONDO:0054782 leukodystrophy, hypomyelinating, 15\n",
      "MONDO:0054791 leukodystrophy, hypomyelinating, 16\n",
      "MONDO:0859221 Yoon-Bellen neurodevelopmental syndrome\n",
      "MONDO:0013722 hypomyelinating leukodystrophy 8 with or without oligodontia and-or hypogonadotropic hypogonadism\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(twogene_phenotypes)\n",
    "print_results(response)"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'ALL'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "ca7fbca4f154c8ac"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(twogene_phenotypes,set_interpretation='ALL')\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:53.571088Z",
     "start_time": "2024-06-05T20:33:50.345803Z"
    }
   },
   "id": "a227220be1e51b52",
   "execution_count": 30
  },
  {
   "cell_type": "code",
   "execution_count": 31,
   "id": "b28ce8d5-177f-4678-9e05-6bb4a39e6ac9",
   "metadata": {
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:53.586263Z",
     "start_time": "2024-06-05T20:33:53.572193Z"
    }
   },
   "outputs": [],
   "source": [
    "# response = phenotypes_to_gene(twogene_phenotypes)\n",
    "# print_results(response)"
   ]
  },
  {
   "cell_type": "markdown",
   "source": [
    "## Autism, SON-related disorder"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "8c08dfedded148f0"
  },
  {
   "cell_type": "code",
   "outputs": [],
   "source": [
    "autism_phenotypes = [\n",
    "    # Autistic behavior\n",
    "    \"HP:0000729\",\n",
    "    # Neurodevelopmental delay\n",
    "    \"HP:0012758\",\n",
    "    # Intellectual disability\n",
    "    \"HP:0001249\",\n",
    "    # Ventricular septal defect\n",
    "    \"HP:0001629\",\n",
    "    # Abnormal facial shape\n",
    "    \"HP:0001999\",\n",
    "    # high arched palate\n",
    "    \"HP:0002705\",\n",
    "    # high nasal bridge\n",
    "    \"HP:0000426\",\n",
    "    # shallow orbits\n",
    "    \"HP:0000586\",\n",
    "    # Abnormality of the palmar creases\n",
    "    \"HP:0010490\"\n",
    "]"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:53.679646Z",
     "start_time": "2024-06-05T20:33:53.587296Z"
    }
   },
   "id": "a767c02d684b710d",
   "execution_count": 32
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'MANY'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "572f7920e3bb739"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0010344 intellectual disability, X-linked 45\n",
      "MONDO:0010398 syndromic X-linked intellectual disability 14\n",
      "MONDO:0030674 Teebi hypertelorism syndrome 2\n",
      "MONDO:0011538 frontoocular syndrome\n",
      "MONDO:0032697 Houge-Janssens syndrome 3\n",
      "MONDO:0019767 hamel cerebro-palato-cardiac syndrome\n",
      "MONDO:0010039 congenital heart defect-round face-developmental delay syndrome\n",
      "MONDO:0013528 intellectual disability, autosomal recessive 14\n",
      "MONDO:0010194 Weill-Marchesani syndrome 1\n",
      "MONDO:0032786 Noonan syndrome 11\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(autism_phenotypes)\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:56.746869Z",
     "start_time": "2024-06-05T20:33:53.680673Z"
    }
   },
   "id": "1032b63a0e54e3d",
   "execution_count": 33
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'ALL'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "df60533f458195aa"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0011538 frontoocular syndrome\n",
      "MONDO:0032697 Houge-Janssens syndrome 3\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(autism_phenotypes,set_interpretation='ALL')\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:59.707327Z",
     "start_time": "2024-06-05T20:33:56.747905Z"
    }
   },
   "id": "ed32645fa819735e",
   "execution_count": 34
  },
  {
   "cell_type": "markdown",
   "source": [
    "## MED12 and SPG7"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "aeb8704e906b8bca"
  },
  {
   "cell_type": "code",
   "outputs": [],
   "source": [
    "med12_spg7_phenotypes = [\n",
    "    \"HP:0033454\", # Tube feeding,\n",
    "    \"HP:0001601\", # Laryngomalacia,\n",
    "    \"HP:0001263\", # Global developmental delay,\n",
    "    \"HP:0000508\", # Ptosis,\n",
    "    \"HP:0001770\", # Toe syndactyly,\n",
    "    \"HP:0000365\", # Hearing impairment,\n",
    "    \"HP:0001999\", # Abnormal facial shape,\n",
    "    \"HP:0012448\", # Delayed myelination,\n",
    "    \"HP:0033725\"  # Thin corpus callosum\n",
    "]"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:33:59.722995Z",
     "start_time": "2024-06-05T20:33:59.708376Z"
    }
   },
   "id": "2926a6c2a579bb79",
   "execution_count": 35
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'MANY'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "aaa99e3caee4b48b"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0859313 neurodevelopmental disorder with speech impairment and with or without seizures\n",
      "MONDO:0012623 intellectual disability, autosomal recessive 4\n",
      "MONDO:0013858 pontine tegmental cap dysplasia\n",
      "MONDO:0859266 neurodevelopmental disorder with severe motor impairment, absent language, cerebral hypomyelination, and brain atrophy\n",
      "MONDO:0012368 aminoacylase 1 deficiency\n",
      "MONDO:0032596 myasthenic syndrome, congenital, 23, presynaptic\n",
      "MONDO:0033667 Delpire-McNeill syndrome\n",
      "MONDO:0033311 Joubert syndrome 33\n",
      "MONDO:0014664 Joubert syndrome 23\n",
      "MONDO:0859221 Yoon-Bellen neurodevelopmental syndrome\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(med12_spg7_phenotypes)\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:34:02.628256Z",
     "start_time": "2024-06-05T20:33:59.724031Z"
    }
   },
   "id": "b17d6a5017caa006",
   "execution_count": 36
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'ALL'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "4d627827650925d2"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0012368 aminoacylase 1 deficiency\n",
      "MONDO:0859221 Yoon-Bellen neurodevelopmental syndrome\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(med12_spg7_phenotypes, set_interpretation='ALL')\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:34:06.762679Z",
     "start_time": "2024-06-05T20:34:02.629387Z"
    }
   },
   "id": "7eaccd8cb9ba50bb",
   "execution_count": 37
  },
  {
   "cell_type": "markdown",
   "source": [
    "## Undiagnosed"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "c871b8d1a03df127"
  },
  {
   "cell_type": "code",
   "outputs": [],
   "source": [
    "undiagnosed_phenotypes = [\n",
    "    \"HP:0001263\", # Global developmental delay,\n",
    "    \"HP:0001250\", # Hearing impairment,\n",
    "    \"HP:0002020\", # Gastroesophageal reflux,\n",
    "    \"HP:0033454\", # Tube feeding,\n",
    "    \"HP:0000097\", # Focal segmental glomerulosclerosis,\n",
    "    \"HP:0001276\", # Hypertonia,\n",
    "    \"HP:0012469\", # Infantile spasms,\n",
    "    \"HP:0002521\", # Hypsarrhythmia,\n",
    "    \"HP:0100704\", # Cerebral visual impairment,\n",
    "    \"HP:0006970\", # Periventricular leukomalacia,\n",
    "    \"HP:0002059\" # Cerebral atrophy\n",
    "]"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:34:06.777479Z",
     "start_time": "2024-06-05T20:34:06.763757Z"
    }
   },
   "id": "cedae2995d082f6",
   "execution_count": 38
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'MANY'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "fe455683567f550a"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0032710 developmental and epileptic encephalopathy, 72\n",
      "MONDO:0033371 developmental and epileptic encephalopathy, 62\n",
      "MONDO:0030046 neurodevelopmental disorder and structural brain anomalies with or without seizures and spasticity\n",
      "MONDO:0014947 developmental and epileptic encephalopathy, 46\n",
      "MONDO:0013277 developmental and epileptic encephalopathy, 5\n",
      "MONDO:0032768 developmental and epileptic encephalopathy, 76\n",
      "MONDO:0014942 developmental and epileptic encephalopathy, 45\n",
      "MONDO:0013351 infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly\n",
      "MONDO:0015205 isolated lissencephaly type 1 without known genetic defects\n",
      "MONDO:0859313 neurodevelopmental disorder with speech impairment and with or without seizures\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(undiagnosed_phenotypes)\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:34:09.809932Z",
     "start_time": "2024-06-05T20:34:06.778540Z"
    }
   },
   "id": "3c823c944dd1c515",
   "execution_count": 39
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'ALL'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "6211f3988cd1685d"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(undiagnosed_phenotypes,set_interpretation=\"ALL\")\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:34:12.768853Z",
     "start_time": "2024-06-05T20:34:09.810922Z"
    }
   },
   "id": "4dac2c77ecaacb5b",
   "execution_count": 40
  },
  {
   "cell_type": "markdown",
   "source": [
    "## Rett syndrome, GABA-A related disorder"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "c34561ca58693af5"
  },
  {
   "cell_type": "code",
   "outputs": [],
   "source": [
    "rett_phenotypes = [\n",
    "    \"HP:0002013\", # Vomiting,\n",
    "    \"HP:0001252\", # Hypotonia,\n",
    "    \"HP:0001263\", # Global developmental delay,\n",
    "    \"HP:0100543\", # Cognitive impairment,\n",
    "    \"HP:0000750\", # Delayed speech and language development,\n",
    "    \"HP:0001250\", # Seizure,\n",
    "    \"HP:0033044\" # Motor regression \n",
    "]"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:34:12.784699Z",
     "start_time": "2024-06-05T20:34:12.770093Z"
    }
   },
   "id": "7f729b21dd868243",
   "execution_count": 41
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'MANY'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "4158cb0395f1be57"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0010451 intellectual disability, X-linked 41\n",
      "MONDO:0859086 intellectual developmental disorder, X-linked 110\n",
      "MONDO:0013697 intellectual disability, autosomal recessive 29\n",
      "MONDO:0014524 intellectual disability, autosomal recessive 47\n",
      "MONDO:0054861 intellectual disability, autosomal recessive 63\n",
      "MONDO:0010450 intellectual disability, X-linked 89\n",
      "MONDO:0010413 intellectual disability, X-linked 95\n",
      "MONDO:0030911 intellectual disability, autosomal dominant 46\n",
      "MONDO:0013705 intellectual disability, autosomal recessive 19\n",
      "MONDO:0011710 specific language impairment 1\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(rett_phenotypes)\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:34:15.162909Z",
     "start_time": "2024-06-05T20:34:12.785717Z"
    }
   },
   "id": "6db560f35e218034",
   "execution_count": 42
  },
  {
   "cell_type": "markdown",
   "source": [
    "### set_interpretation == 'ALL'"
   ],
   "metadata": {
    "collapsed": false
   },
   "id": "bbdc183581afd612"
  },
  {
   "cell_type": "code",
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "200\n",
      "MONDO:0030911 intellectual disability, autosomal dominant 46\n"
     ]
    }
   ],
   "source": [
    "response = phenotypes_to_disease(rett_phenotypes, set_interpretation=\"ALL\")\n",
    "print_results(response)"
   ],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:34:17.546754Z",
     "start_time": "2024-06-05T20:34:15.164202Z"
    }
   },
   "id": "dc2c603d18153c7",
   "execution_count": 43
  },
  {
   "cell_type": "code",
   "outputs": [],
   "source": [],
   "metadata": {
    "collapsed": false,
    "ExecuteTime": {
     "end_time": "2024-06-05T20:34:17.562466Z",
     "start_time": "2024-06-05T20:34:17.547937Z"
    }
   },
   "id": "2de8e7d1d0ef6f33",
   "execution_count": 43
  }
 ],
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