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tetomontiAndrew Chen
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Andrew Chen
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hits list modified to have space-comma-space as separator (it is now simply comma, which is often ambiguous)
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R/hyper_enrichment.R

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@@ -42,7 +42,8 @@
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geneset=n.genesets,
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overlap=n.hits,
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background=background,
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hits=sapply(genesets, function(x, y) paste(intersect(x, y), collapse=','), signature.found),
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#hits=sapply(genesets, function(x, y) paste(intersect(x, y), collapse=','), signature.found),
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hits=sapply(genesets, function(x, y) paste(intersect(x, y), collapse=' , '), signature.found),
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stringsAsFactors=FALSE)
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# Handle plots

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