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app.R
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# import libraries ####
library(shiny)
library(rsconnect)
library(shinyWidgets)
library(tidyverse)
library(dplyr)
library(readxl)
library(data.table)
library(vroom)
library(shinythemes)
library(ggplot2)
library(plotly)
library(sortable)
library(shinyjs)
library(shinyBS)
library(shinyalert)
options(app_idle_timeout = 0, shiny.maxRequestSize = 3000*1024^2)
# Load Data ####
#
# sg_ref <- as.data.frame(read_csv('sg_ref.csv')) %>%
# filter(desirability > 4) %>%
# filter(Northeast == 1)
#
# primesp <- sg_ref %>%
# filter(desirability == 1) %>%
# pull(cname,Gen_sp)
#
# secsp <- sg_ref %>%
# filter(desirability == 2) %>%
# pull(cname,Gen_sp)
#
# tertsp <- sg_ref %>%
# filter(desirability == 3) %>%
# pull(cname,Gen_sp)
#
# hwdf <- sg_ref %>%
# filter(HW_SW == "HW")
#
# swdf <- sg_ref %>%
# filter(HW_SW == 'SW')
# function builder ####
## functions for calculating stocking percentages ####
C_lineBA <- function(DBH, SG){
a = 0.00015# constants from Ducey&knapp 2010 relative density measure
b = 0.00218 # constants from Ducey&knapp 2010 relative density measure
c = 0.4 #c-line stocking
k = pi/40000 #metric constant for area
BA <- (((25^1.6*c*k)/(a+b*SG))*(DBH*2.54)^0.4)*4.356
}
B_lineBA <- function(DBH, SG){
a = 0.00015
b = 0.00218
c = 0.6 #c-line stocking
k = pi/40000 #metric constant for area
BA <- (((25^1.6*c*k)/(a+b*SG))*(DBH*2.54)^0.4)*4.356
}
A_lineBA <- function(DBH, SG){
a = 0.00015
b = 0.00218
c = 1 #c-line stocking
k = pi/40000 #metric constant for area
BA <- (((25^1.6*c*k)/(a+b*SG))*(DBH*2.54)^0.4)*4.356
}
## function to read in and calculate deg for a FVS output ####
fvs_calc <- function(data, prime,sec,tert){
# SG_ref <- vroom("SG_ref.csv", col_types = "ffnn")
removedSp <- c("ACSA3","FAGR","TSCA","PIRU","BEAL2","ACRU","ABBA","ACPE")
sg_ref()$splist <- sub("^0+", "", sg_ref()$splist)
#remove rows that have plant ID instead of fia sp codes
data<- data[!grepl(paste(removedSp, collapse="|"), data$Species),]
#remove leading zeros in fia species cods
data$Species <- sub("^0+", "", data$Species)
#join fvs data SG ref so we have specific gravity for all species
df1 <- data%>%
full_join(sg_ref(), by = c("Species" = "splist"))
#create coloumns for tree factor, relative density, and counting trees by desirability.
df1.2 <- df1%>%
mutate(TPH = TPA*2.47105,
TF = TPH/`Total Plots`,
RD = TF*(0.00015+0.00218*sg)*((DBH*2.54)/25)^1.6,
prime_AGS = Gen_sp %in% prime & `Ags Ugs` == "AGS", # next four lines create boolians for if a tree is a primary AGS or secondary/tertiary
sec_AGS = Gen_sp %in% sec & `Ags Ugs` == "AGS",
tert_AGS = Gen_sp %in% tert & `Ags Ugs` == "AGS",
UGS = `Ags Ugs` == "UGS")
standRD <- df1.2%>%
group_by(StandID)%>%
summarise(PrimeRD = sum(if_else(prime_AGS == TRUE,RD,0)),
SecRD = sum(if_else(sec_AGS == TRUE,RD,0)),
TertRD = sum(if_else(tert_AGS == TRUE,RD,0)),
UGSRD = sum(if_else(UGS == TRUE,RD,0))
)
standRD.Table <- as.data.table(standRD)
standRD.Table <- standRD.Table[, `:=` (Deg = case_when(PrimeRD >= 0.4 ~ 1,
PrimeRD + SecRD >= 0.4~ 2,
PrimeRD + SecRD + TertRD >= 0.4 ~ 3,
PrimeRD + SecRD + TertRD + UGSRD >= 0.4 ~4,
TRUE ~ 5)), by = .(StandID)]
dfStandRD <- as.data.frame(standRD.Table)
dfStandRD_v2 <- dfStandRD%>%
distinct()%>%
na.omit()
return(dfStandRD_v2)
}
createhw_input_pair_ui <- function(hwspecies_name, hwsci_name) {
fluidRow(style = "overflow-y:scroll; max-height: 400px; position:relative;",
column(6, align = "center",
h5(strong(hwspecies_name)),
h6(hwsci_name),
column(6, align = "center", numericInput(
inputId = hwsci_name,
label = "AGS",
value = 0,
min = 0,
width = validateCssUnit(200)
)),
column(6, align = "center", numericInput(
inputId = paste0(hwsci_name, "UGS",sep = ''),
label = "UGS",
value = 0,
min = 0,
width = validateCssUnit(200)
))
)
)
}
createsw_input_pair_ui <- function(swspecies_name, swsci_name) {
fluidRow(style = "overflow-y:scroll; max-height: 400px; position:relative;",
column(6, align = "center",
h5(strong(swspecies_name)),
h6(swsci_name),
column(6, align = "center", numericInput(
inputId = swsci_name,
label = "AGS",
value = 0,
min = 0,
width = validateCssUnit(200)
)),
column(6, align = "center", numericInput(
inputId = paste0(swsci_name, "UGS", sep = ''),
label = "UGS",
value = 0,
min = 0,
width = validateCssUnit(200)
))
)
)
}
createhwslider_input_pair_ui <- function(hwspecies_name, hwsci_name) {
fluidRow(style = "overflow-y:scroll; max-height: 400px; position:relative;",
column(6, align = "center",
h5(strong(hwspecies_name)),
h6(hwsci_name),
column(6, align = "center", numericInput(
inputId = hwsci_name,
label = "Basal Area Proportion",
value = 0,
min = 0,
max = 1,
width = validateCssUnit(200)
)),
column(6, align = "center", sliderInput(
inputId = paste0(hwsci_name, "AGS", sep = ''),
label = "Proportion AGS",
value = 0,
min = 0,
max = 1,
width = validateCssUnit(200)
))
)
)
}
createswslider_input_pair_ui <- function(swspecies_name, swsci_name) {
fluidRow(style = "overflow-y:scroll; max-height: 400px; position:relative;",
column(6, align = "center",
h5(strong(swspecies_name)),
h6(swsci_name),
column(6, align = "center", numericInput(
inputId = swsci_name,
label = "Basal Area Proportion",
value = 0,
min = 0,
max = 1,
width = validateCssUnit(200)
)),
column(6, align = "center", sliderInput(
inputId = paste0(swsci_name, "AGS", sep = ''),
label = "Proportion AGS",
value = 0,
min = 0,
max = 1,
width = validateCssUnit(200)
))
)
)
}
# Define UI #####
shinyApp(
ui = tagList(
useShinyjs(),
tags$head(
tags$link(rel="stylesheet", type="text/css",
href="slick-1.8.1/slick/slick-theme.css"),
tags$link(rel="stylesheet", type="text/css",
href="slick-1.8.1/slick/slick.css"),
tags$script(type="text/javascript",
src="slick-1.8.1/slick/slick.js"),
tags$script(HTML(
"$(document).ready(function(){
$('#images').slick({
arrows: true,
dots:true
});
});")),
tags$style(HTML(
"#images .slick-prev {
position:default;
}
#images .slick-next {
position:default;
}
.slick-prev:before, .slick-next:before {
color:#2c3e50 ;
font-size: 20px;
}
.content {
margin: auto;
padding: auto;
width: auto;
}"))
),
navbarPage(
theme = shinytheme("flatly"),
"Degradation Calculator",
## How To ####
tabPanel("How To",
fluidRow(align = "center",
tags$div(
class = "content",
tags$div(
id = "images",
tags$img(
src = "Welcome.jpg",
width = "auto",
height = "auto"
),
tags$img(
src = "HowitWorks1.jpg",
width = "auto",
height = "auto"
),
tags$img(
src = "HowitWorks2.jpg",
width = "auto",
height = "auto"
),
tags$img(
src = "PlotInput.jpg",
width = "auto",
height = "auto"
),
tags$img(
src = "TreeListInput.jpg",
width = "auto",
height = "auto"
),
tags$img(
src = "TreeCatSelector.jpg",
width = "auto",
height = "auto"
)
)
)
)
),
## Prism Plots #####
tabPanel("Plot Input",
### Sidebar Panel ####
sidebarPanel(
#input if a Basal area prism is going to be used or known basal area by species
selectInput('region','Plese Select Region', choices = c("Northeast",'Mid-Atlantic'),selected = 'Northeast'),
selectInput('BAInput','1. Prism Plot Data or Known Basal Area (sqft/acre) by Species?',
choices = c('Prism Plot Data','Known Basal Area by Species','Basal Area percentage'),selected = "Prism Plot Data"),
bsTooltip("BAInput", "Choose if you are entering 1. Data directly from a prism plot2. The known basal area (sqft/acre) by species in the stand3. The percent basal area of each species.",
"right", options = list(container = "body")),
uiOutput('basalArea'),
bsTooltip("basalArea", "Enter the basal area factor prism you are using to conduct the prism plot",
"right", options = list(container = "body")),
uiOutput('basalArea2'),
bsTooltip("basalArea2", "Enter the number of prism plots you conducted in the stand",
"right", options = list(container = "body")),
uiOutput('totalBA'),
bsTooltip("totalBA", "Enter the total basal area of the stand",
"right", options = list(container = "body")),
#input wether stand avg dbh or stand class size will be used
selectInput("dbhInput", "2. Select Stand Class Size or Mean DBH of Stand",
c("Stand Class Size","Mean DBH of Stand")),
bsTooltip("dbhInput", "Choose whether you are going to use the average stand size class to calculate DBH or if you have calculated the mean DBH of the stand",
"right", options = list(container = "body")),
uiOutput("ui"),
uiOutput('KnownBANote'),
fluidPage(
uiOutput("HWTrDtInputs"),
uiOutput('SWTrDtInputs')
)
### Main panel#####
),
mainPanel(
fluidRow(style = "padding-left: 200px",align = "center",
plotlyOutput("plot",width = 600, height = 700),
#tableOutput("Testdf"),
verbatimTextOutput("allInputs")
),
fluidRow(style = "padding: 50px,50px,50px,50px", align = "center",
htmlOutput("degValue")
)
)
),
## FVS Outputs #####
tabPanel("Tree List Input",
sidebarPanel(
tags$head(tags$style(type="text/css", "
.loading {
display: inline-block;
overflow: hidden;
height: 1.3em;
margin-top: -0.3em;
line-height: 1.5em;
vertical-align: text-bottom;
box-sizing: border-box;
}
.loading.dots::after {
text-rendering: geometricPrecision;
content: '.\\A..\\A...\\A....';
animation: spin10 2s steps(10) infinite;
animation-duration: 2s;
animation-timing-function: steps(10);
animation-delay: 0s;
animation-iteration-count: infinite;
animation-direction: normal;
animation-fill-mode: none;
animation-play-state: running;
animation-name: spin10;
}
.loading::after {
display: inline-table;
white-space: pre;
text-align: left;
}
@keyframes spin10 { to { transform: translateY(-15.0em); } }
'
")),
# paste("Select FVS file to upload. File must be no larger than 3Gb and must be a csv"),
fileInput("FVS_Sheet", "Upload Tree List",
accept = ".csv",
multiple = FALSE,
width = 750),
downloadButton("downloadData", "Download")
),
mainPanel(
conditionalPanel(condition="$('html').hasClass('shiny-busy')",
tags$div("Please Wait While App is Working", id = "UpdateAnimate", class = "loading dots")),
# dataTableOutput("treelist_checker")
dataTableOutput("FVS")
)
),
## Tree Category Selector#####
tabPanel("Tree Category Selector",
fluidRow(align = "center",
h3("Change species desirablity categories"),
h5("Click and drag species into prefered desirability boxes. To reset species, simply refresh app")
),
uiOutput('list'),
fluidRow(align = "center",
h6("Default Species Categories"),
tags$div(
class = "content",
tags$div(
id = "images",
tags$img(
src = "SpeciesCat.jpg",
width = "auto"
)
)
)
)
)
)
),
# SERVER #####
server = function(input, output) {
## reactive objects ####
SpDataframe <- reactive({
as.data.frame(read_csv('sg_ref.csv')) %>%
filter(desirability < 4)
})
sg_ref <- reactive({
sg_ref <- SpDataframe() %>%
filter(!!sym(input$region) == 1)
})
primesp <- reactive({
sg_ref() %>%
filter(desirability == 1) %>%
pull(cname,Gen_sp)
})
secsp <- reactive({sg_ref() %>%
filter(desirability == 2) %>%
pull(cname,Gen_sp)
})
tertsp <- reactive({
sg_ref() %>%
filter(desirability == 3) %>%
pull(cname,Gen_sp)
})
hwdf <-reactive({
sg_ref() %>%
filter(HW_SW == "HW")
})
swdf <- reactive({sg_ref() %>%
filter(HW_SW == 'SW')
})
datasetInput <- reactive({
file <- input$FVS_Sheet
ext <- tools::file_ext(file$datapath)
validate(need(ext == "csv",
"Please Upload a csv File, Results Will Appear Here"))
vroom(file$datapath, col_types = c("MgmtID" = "f","StandID" = "f", "Species" = "f"))
})
primaryInput <- reactive({
primarySp <- input$prime
})
SecondaryInput <- reactive({
secondarySp <- input$sec
})
TertiaryInput <- reactive({
tertiarySp <- input$tert
})
hw_inputs <- reactive({
# Apply the function to each row of the dataframe to create input pairs
inputhw_pairs_ui <- lapply(1:nrow(hwdf()), function(i) {
createhw_input_pair_ui(hwdf()$cname[i], hwdf()$Gen_sp[i])
})
# Combine input pairs into a single UI element
do.call(tagList, inputhw_pairs_ui)
})
sw_inputs <- reactive({
# Apply the function to each row of the dataframe to create input pairs
inputsw_pairs_ui <- lapply(1:nrow(swdf()), function(i) {
createsw_input_pair_ui(swdf()$cname[i], swdf()$Gen_sp[i])
})
# Combine input pairs into a single UI element
do.call(tagList, inputsw_pairs_ui)
})
perhw_inputs <- reactive({
# Apply the function to each row of the dataframe to create input pairs
inputhw_pairs_ui <- lapply(1:nrow(hwdf()), function(i) {
createhwslider_input_pair_ui(hwdf()$cname[i], hwdf()$Gen_sp[i])
})
# Combine input pairs into a single UI element
do.call(tagList, inputhw_pairs_ui)
})
persw_inputs <- reactive({
# Apply the function to each row of the dataframe to create input pairs
inputsw_pairs_ui <- lapply(1:nrow(swdf()), function(i) {
createswslider_input_pair_ui(swdf()$cname[i], swdf()$Gen_sp[i])
})
# Combine input pairs into a single UI element
do.call(tagList, inputsw_pairs_ui)
})
SpeciesDataInput <- reactive({
# sg_ref <- read_xlsx('SG_ref.xlsx',sheet = 2)
# data.frame(sp = sg_ref %>% pull(Gen_sp))
splist <- sg_ref() %>% pull(Gen_sp)
# Use lapply to iterate over the input IDs
data_list <- lapply(splist, function(id) {
# Check if the input has a non-null value
if (!is.null(input[[id]])){
# If value is not null, return a dataframe row
data.frame(Gen_sp = id, AGSValue = input[[id]],
UGSValue = ifelse(input$BAInput != 'Basal Area percentage',
input[[paste(id,'UGS',sep = "")]],
(1-input[[paste(id,'AGS',sep = '')]])*input[[id]]),
AGSProp = ifelse(input$BAInput == 'Basal Area percentage',
input[[id]]*input[[paste(id,"AGS",sep = '')]],
0))
} else {
# If value is null, return NULL
NULL
}
})
# Use Filter to remove NULL entries
data <- do.call(rbind, Filter(function(x) !is.null(x), data_list))
data <- data %>%
mutate(AGSBA = case_when(input$BAInput == 'Prism Plot Data'~ (AGSValue*input$BAF)/input$Nsweeps,
input$BAInput == 'Basal Area percentage'~ AGSProp*input$totBA,
TRUE~AGSValue),
UGSBA = case_when(input$BAInput == 'Prism Plot Data'~ (UGSValue*input$BAF)/input$Nsweeps,
input$BAInput == 'Basal Area percentage'~ UGSValue*input$totBA,
TRUE~UGSValue),
TOTBA = AGSBA+UGSBA) %>%
filter(AGSValue!=0) %>%
left_join(sg_ref(),by = join_by(Gen_sp))
return(data)
})
## renderUI inputs ####
output$basalArea <- renderUI({
if (is.null(input$BAInput))
return()
switch(input$BAInput,
"Prism Plot Data" = numericInput("BAF","1a. Basal Area Factor",value = 5),
"Known Basal Area by Species" = NULL,
"Basal Area percentage" = NULL
)
})
output$basalArea2 <- renderUI({
if (is.null(input$BAInput))
return()
switch(input$BAInput,
"Prism Plot Data" = numericInput("Nsweeps","1b. Number of prism points", value = 1),
"Known Basal Area by Species" = NULL,
"Basal Area percentage" = NULL
)
})
output$totalBA <- renderUI({
if (is.null(input$BAInput))
return()
switch(input$BAInput,
"Prism Plot Data" = NULL,
"Known Basal Area by Species" = numericInput("totBA","1a. Total Basal Area of Stand", value = 0),
"Basal Area percentage" = numericInput("totBA","1a. Total Basal Area of Stand", value = 0)
)
})
output$KnownBANote <- renderUI({
if (is.null(input$BAInput))
return()
switch(input$BAInput,
"Prism Plot Data" = fluidRow(
h5(strong("3. Input Tallied Trees by species")),
column(6, align = "center", h3(strong("Hardwood"))),
column(6, align = "center", h3(strong("Softwood")))
),
"Known Basal Area by Species" = fluidRow(
h5(strong("3. Input Basal Area by Species")),
column(6, align = "center", h3(strong("Hardwood"))),
column(6, align = "center", h3(strong("Softwood")))
),
"Basal Area percentage" = fluidRow(
h5(strong("3. Input Percent (in decimal) Basal Area by Species")),
column(6, align = "center", h3(strong("Hardwood"))),
column(6, align = "center", h3(strong("Softwood")))
)
)
})
output$ui <- renderUI({
if (is.null(input$dbhInput))
return()
switch(input$dbhInput,
"Stand Class Size" = selectInput("DBH","2a. Average Size Class in Plot",
choices = c('Sapling (1-5")',
'Pole (5-9")',
'Small Sawtimber (9-13")',
'Large Sawtimber (>13")')),
"Mean DBH of Stand" = numericInput("exactDBH","2a. Mean DBH of Stand", 0)
)
})
output$HWTrDtInputs <- renderUI({
if (is.null(input$BAInput))
return()
switch(input$BAInput,
"Prism Plot Data" = hw_inputs(),
"Known Basal Area by Species" = hw_inputs(),
'Basal Area percentage' = perhw_inputs()
)
})
output$SWTrDtInputs <- renderUI({
if (is.null(input$BAInput))
return()
switch(input$BAInput,
"Prism Plot Data" = sw_inputs(),
"Known Basal Area by Species" = sw_inputs(),
'Basal Area percentage' = persw_inputs()
)
})
output$list <-
renderUI({
fluidRow(align = "center",
bucket_list(
header = c(""),
add_rank_list(
text = "Primary",
labels = primesp(),
input_id = "prime"
),
add_rank_list(
text = "Secondary",
labels = secsp(),
input_id = "sec"
),
add_rank_list(
text = "Tertiary",
labels = tertsp(),
input_id = "tert"
),
group_name = "bucket_list_group"
)
)
})
### prism Tree sp. Inputs ######
# "Prism Plot Data" = fluidRow(style = "overflow-y:scroll; max-height: 400px; position:relative;",
# column(6, align = "center",
# h5(strong("American Beech")),
# h6("(Fagus grandifolia)"),
# column(6,align = "right",numericInput("Fagus_grandifolia", "AGS", 0, min = 0,width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Fagus_grandifoliaUGS", "UGS", 0, min = 0,width = validateCssUnit(100))),
#
# h5(strong("American Elm")),
# h6("(Ulmus americana)"),
# column(6,align = "right",numericInput("Ulmus_americana", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Ulmus_americanaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Balsam Poplar")),
# h6("(Populus balsamifera)"),
# column(6,align = "right", numericInput("Populus_balsamifera", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Populus_balsamiferaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Bigtooth Aspen")),
# h6("(Populus grandidentata)"),
# column(6,align = "right",numericInput("Populus_grandidentata", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Populus_grandidentataUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Black Birch")),
# h6("(Betula lenta)"),
# column(6,align = "right", numericInput("Betula_lenta", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Betula_lentaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Black Cherry")),
# h6("(Prunus serotina)"),
# column(6,align = "right",numericInput("Prunus_serotina", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Prunus_serotinaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Grey Birch")),
# h6("(Betual populifolia)"),
# column(6,align = "right",numericInput("Betula_populifolia", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Betula_populifoliaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Quaking Aspen")),
# h6("(Populaus tremuloides)"),
# column(6,align = "right",numericInput("Populus_tremuloides", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Populus_tremuloidesUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Red Maple")),
# h6("(Acer rubrum)"),
# column(6,align = "right",numericInput("Acer_rubrum", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Acer_rubrumUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Red Oak")),
# h6("(Quercus rubra)"),
# column(6,align = "right",numericInput("Quercus_rubra", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Quercus_rubraUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Sugar Maple")),
# h6("(Acer saccharum)"),
# column(6,align = "right",numericInput("Acer_saccharum", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Acer_saccharumUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("White Ash")),
# h6("(Fraxinus americana)"),
# column(6,align = "right",numericInput("Fraxinus_americana", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Fraxinus_americanaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("White Birch")),
# h6("(Betula papyrifera)"),
# column(6,align = "right",numericInput("Betula_papyrifera", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Betula_papyriferaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("White Oak")),
# h6("(Quercus alba)"),
# column(6,align = "right",numericInput("Quercus_alba", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Quercus_albaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Yellow Birch")),
# h6("(Betula alleghaniensis)"),
# column(6,align = "right",numericInput("Betula_alleghaniensis", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Betula_alleghaniensisUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
# ),
# column(6, align = "center",
# h5(strong("Arborvitae")),
# h6("(Thuja occidentailis)"),
# column(6,align = "right",numericInput("Thuja_occidentalis", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Thuja_occidentalisUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Balsam Fir")),
# h6("(Abies balsamea)"),
# column(6,align = "right",numericInput("Abies_balsamea", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Abies_balsameaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Black Spruce")),
# h6("(Picea Mariana)"),
# column(6,align = "right",numericInput("Picea_mariana", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Picea_marianaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Eastern Hemlock")),
# h6("(Tsuga canadensis)"),
# column(6,align = "right",numericInput("Tsuga_canadensis", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Tsuga_canadensisUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Eastern Tamarack")),
# h6("(Larix laricina)"),
# column(6,align = "right",numericInput("Larix_laricina", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Larix_laricinaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Red Pine")),
# h6("(Pinus resinosa)"),
# column(6,align = "right",numericInput("Pinus_resinosa", "AGS", 0, min = 0, width = validateCssUnit(150))),
# column(6,align = "left",numericInput("Pinus_resinosaUGS", "UGS", 0, min = 0, width = validateCssUnit(150))),
#
# h5(strong("Red Spruce")),
# h6("(Picea rubens)"),
# column(6,align = "right",numericInput("Picea_rubens", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Picea_rubensUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("White Pine")),
# h6("(Pinus strobus)"),
# column(6,align = "right",numericInput("Pinus_strobus", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Pinus_strobusUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("White Spruce")),
# h6("(Picea glauca)"),
# column(6,align = "right",numericInput("Picea_glauca", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Picea_glaucaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
#
# )
# ),
### Known BATree sp. Inputs ######
# "Known Basal Area by Species" = fluidRow(style = "overflow-y:scroll; max-height: 400px; position:relative;",
# column(6, align = "center",
# h5(strong("American Beech")),
# h6("(Fagus grandifolia)"),
# column(6,align = "right",numericInput("Fagus_grandifolia", "AGS", 0, min = 0,width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Fagus_grandifoliaUGS", "UGS", 0, min = 0,width = validateCssUnit(100))),
#
# h5(strong("American Elm")),
# h6("(Ulmus americana)"),
# column(6,align = "right",numericInput("Ulmus_americana", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Ulmus_americanaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Balsam Poplar")),
# h6("(Populus balsamifera)"),
# column(6,align = "right", numericInput("Populus_balsamifera", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Populus_balsamiferaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Bigtooth Aspen")),
# h6("(Populus grandidentata)"),
# column(6,align = "right",numericInput("Populus_grandidentata", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Populus_grandidentataUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Black Birch")),
# h6("(Betula lenta)"),
# column(6,align = "right", numericInput("Betula_lenta", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Betula_lentaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Black Cherry")),
# h6("(Prunus serotina)"),
# column(6,align = "right",numericInput("Prunus_serotina", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Prunus_serotinaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Grey Birch")),
# h6("(Betual populifolia)"),
# column(6,align = "right",numericInput("Betula_populifolia", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Betula_populifoliaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Quaking Aspen")),
# h6("(Populaus tremuloides)"),
# column(6,align = "right",numericInput("Populus_tremuloides", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Populus_tremuloidesUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Red Maple")),
# h6("(Acer rubrum)"),
# column(6,align = "right",numericInput("Acer_rubrum", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Acer_rubrumUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Red Oak")),
# h6("(Quercus rubra)"),
# column(6,align = "right",numericInput("Quercus_rubra", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Quercus_rubraUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Sugar Maple")),
# h6("(Acer saccharum)"),
# column(6,align = "right",numericInput("Acer_saccharum", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Acer_saccharumUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("White Ash")),
# h6("(Fraxinus americana)"),
# column(6,align = "right",numericInput("Fraxinus_americana", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Fraxinus_americanaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("White Birch")),
# h6("(Betula papyrifera)"),
# column(6,align = "right",numericInput("Betula_papyrifera", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Betula_papyriferaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("White Oak")),
# h6("(Quercus alba)"),
# column(6,align = "right",numericInput("Quercus_alba", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Quercus_albaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Yellow Birch")),
# h6("(Betula alleghaniensis)"),
# column(6,align = "right",numericInput("Betula_alleghaniensis", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Betula_alleghaniensisUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
# ),
# column(6, align = "center",
# h5(strong("Arborvitae")),
# h6("(Thuja occidentailis)"),
# column(6,align = "right",numericInput("Thuja_occidentalis", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Thuja_occidentalisUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Balsam Fir")),
# h6("(Abies balsamea)"),
# column(6,align = "right",numericInput("Abies_balsamea", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Abies_balsameaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Black Spruce")),
# h6("(Picea Mariana)"),
# column(6,align = "right",numericInput("Picea_mariana", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Picea_marianaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Eastern Hemlock")),
# h6("(Tsuga canadensis)"),
# column(6,align = "right",numericInput("Tsuga_canadensis", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Tsuga_canadensisUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Eastern Tamarack")),
# h6("(Larix laricina)"),
# column(6,align = "right",numericInput("Larix_laricina", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Larix_laricinaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("Red Pine")),
# h6("(Pinus resinosa)"),
# column(6,align = "right",numericInput("Pinus_resinosa", "AGS", 0, min = 0, width = validateCssUnit(150))),
# column(6,align = "left",numericInput("Pinus_resinosaUGS", "UGS", 0, min = 0, width = validateCssUnit(150))),
#
# h5(strong("Red Spruce")),
# h6("(Picea rubens)"),
# column(6,align = "right",numericInput("Picea_rubens", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Picea_rubensUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("White Pine")),
# h6("(Pinus strobus)"),
# column(6,align = "right",numericInput("Pinus_strobus", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Pinus_strobusUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
# h5(strong("White Spruce")),
# h6("(Picea glauca)"),
# column(6,align = "right",numericInput("Picea_glauca", "AGS", 0, min = 0, width = validateCssUnit(100))),
# column(6,align = "left",numericInput("Picea_glaucaUGS", "UGS", 0, min = 0, width = validateCssUnit(100))),
#
#
# )
# ),
### BA perc Tree sp. Inputs ######
# 'Basal Area percentage' = fluidRow(style = "overflow-y:scroll; max-height: 400px; position:relative;",
# column(6, align = "center",
# h5(strong("American Beech")),
# h6("(Fagus grandifolia)"),
# column(6,align = "right",numericInput("Fagus_grandifolia", "BA percentage", 0, min = 0, max = 1)),
# column(6,align = "left", sliderInput("Fagus_grandifoliaAGS", "percentAGS", 0, min = 0, max = 1, step = 0.1)),
#
# h5(strong("American Elm")),
# h6("(Ulmus americana)"),
# column(6,align = "right",numericInput("Ulmus_americana", "BA percentage", 0, min = 0, max = 1)),
# column(6,align = "left",sliderInput("Ulmus_americanaAGS", "percentAGS", 0, min = 0, max = 1, step = 0.1)),
#
# h5(strong("Balsam Poplar")),
# h6("(Populus balsamifera)"),
# column(6,align = "right", numericInput("Populus_balsamifera", "BA percentage", 0, min = 0, max = 1)),
# column(6,align = "left",sliderInput("Populus_balsamiferaAGS", "percentAGS", 0, min = 0, max = 1, step = 0.1)),
#
# h5(strong("Bigtooth Aspen")),
# h6("(Populus grandidentata)"),
# column(6,align = "right",numericInput("Populus_grandidentata", "BA percentage", 0, min = 0, max = 1)),
# column(6,align = "left",sliderInput("Populus_grandidentataAGS", "percentAGS", 0, min = 0, max = 1, step = 0.1)),
#
# h5(strong("Black Birch")),
# h6("(Betula lenta)"),
# column(6,align = "right", numericInput("Betula_lenta", "BA percentage", 0, min = 0, max = 1)),
# column(6,align = "left",sliderInput("Betula_lentaAGS", "percentAGS", 0, min = 0, max = 1, step = 0.1)),
#
# h5(strong("Black Cherry")),
# h6("(Prunus serotina)"),
# column(6,align = "right",numericInput("Prunus_serotina", "BA percentage", 0, min = 0, max = 1)),
# column(6,align = "left",sliderInput("Prunus_serotinaAGS", "percentAGS", 0, min = 0, max = 1, step = 0.1)),
#
# h5(strong("Grey Birch")),
# h6("(Betual populifolia)"),
# column(6,align = "right",numericInput("Betula_populifolia", "BA percentage", 0, min = 0, max = 1)),
# column(6,align = "left",sliderInput("Betula_populifoliaAGS", "percentAGS", 0, min = 0, max = 1, step = 0.1)),
#
# h5(strong("Quaking Aspen")),
# h6("(Populaus tremuloides)"),
# column(6,align = "right",numericInput("Populus_tremuloides", "BA percentage", 0, min = 0, max = 1)),
# column(6,align = "left",sliderInput("Populus_tremuloidesAGS", "percentAGS", 0, min = 0, max = 1, step = 0.1)),
#
# h5(strong("Red Maple")),
# h6("(Acer rubrum)"),
# column(6,align = "right",numericInput("Acer_rubrum", "BA percentage", 0, min = 0, max = 1)),
# column(6,align = "left",sliderInput("Acer_rubrumAGS", "percentAGS", 0, min = 0, max = 1, step = 0.1)),
#
# h5(strong("Red Oak")),
# h6("(Quercus rubra)"),
# column(6,align = "right",numericInput("Quercus_rubra", "BA percentage", 0, min = 0, max = 1)),
# column(6,align = "left",sliderInput("Quercus_rubraAGS", "percentAGS", 0, min = 0, max = 1, step = 0.1)),
#
# h5(strong("Sugar Maple")),
# h6("(Acer saccharum)"),
# column(6,align = "right",numericInput("Acer_saccharum", "BA percentage", 0, min = 0, max = 1)),