_pkgdown.yml

url: https://natverse.org/malevnc/
template:
  bootstrap: 5
navbar:
  structure:
    left:
    - home
    - intro
    - reference
    - articles
    - tutorials
    - news
    - help
    right:
    - natverse
    - github
  components:
    home:
      icon: fas fa-home fa-lg
      href: index.html
    reference:
      text: Reference
      href: reference/index.html
    github:
      icon: fab fa-github fa-lg
      href: https://github.com/natverse/malevnc/
    natverse:
      text: natverse
      href: https://natverse.github.io
    help:
      text: Help
      href: SUPPORT.html

reference:
- title: General package functions
  contents:
  - '`malevnc-package`'
  - '`dr_manc`'
- title: Server connections and Neuroglancer URLs
  contents:
  - '`choose_malevnc_dataset`'
  - '`manc_neuprint`'
  - '`manc_dvid_node`'
  - '`manc_scene`'
  - '`dvid_tools`'
  - '`flyem_shorten_url`'
- title: Body information and ids
  contents:
  - '`manc_ids`'
  - '`manc_xyz2bodyid`'
  - '`manc_islatest`'
  - '`manc_size`'
  - '`manc_mutations`'
  - '`manc_somapos`'
- title: Read annotations
  contents:
  - '`manc_body_annotations`'
  - '`manc_dvid_annotations`'
  - '`manc_point_annotations`'
  - '`manc_meta`'
  - '`manc_neuprint_meta`'
  - '`manc_user_annotations`'
  - '`clio_auth`'
- title: Make annotations
  contents:
  - '`manc_annotate_body`'
  - '`manc_annotate_soma`'
  - '`manc_set_lrgroup`'
  - '`manc_check_group_complete`'
  - '`manc_set_dvid_instance`'
- title: Connectivity
  contents:
  - '`manc_connection_table`'
  - '`manc_leg_summary`'
- title: Meshes, Skeletons and Geometry
  contents:
  - '`read_draco_meshes`'
  - '`manc_read_neurons`'
  - '`mirror_manc`'
  - '`manc_lr_position`'
  - '`manc_view3d`'
  - '`download_manc_registrations`'
- title: Cartoon summaries
  contents:
  - '`colour_leg_muscles`'
- title: Data objects
  contents:
  - '`mancneckseeds`'
  - '`mancsomapos`'
  - '`MANC.surf`'
  - '`MANC.tissue.surf`'
  - '`MANC.tracts`'
  - '`MANCsym`'