diff --git a/R/configuration.R b/R/configuration.R index be0eca58..ac64654b 100644 --- a/R/configuration.R +++ b/R/configuration.R @@ -80,7 +80,8 @@ configuration <- function(config) { # check that multi-host dimensions are ensured multihost_check <- - multihost_checks(infected_file_list, host_file_list, competency_table, pest_host_table) + multihost_checks(config$infected_file_list, config$host_file_list, config$competency_table, + config$pest_host_table) if (multihost_check$checks_passed) { config$host_names <- multihost_check$host_names config$pest_host_table_list <- multihost_check$pest_host_table_list