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ne-dmnd-blast.xml
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<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
<BlastOutput_program>blastx</BlastOutput_program>
<BlastOutput_version>BLASTX 2.2.29+</BlastOutput_version>
<BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
<BlastOutput_db>/tmp/cablastp-fine-search-db168516435/blastdb-fine</BlastOutput_db>
<BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
<BlastOutput_query-def>YAL001C TFC3 SGDID:S000000001, Chr I from 151006-147594,151166-151097, Genome Release 64-1-1, reverse complement, Verified ORF, "Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauB domain of TFIIIC that binds DNA at the BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding"</BlastOutput_query-def>
<BlastOutput_query-len>3483</BlastOutput_query-len>
<BlastOutput_param>
<Parameters>
<Parameters_matrix>BLOSUM62</Parameters_matrix>
<Parameters_expect>10</Parameters_expect>
<Parameters_gap-open>11</Parameters_gap-open>
<Parameters_gap-extend>1</Parameters_gap-extend>
<Parameters_filter>L;</Parameters_filter>
</Parameters>
</BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
<Iteration_iter-num>1</Iteration_iter-num>
<Iteration_query-ID>Query_1</Iteration_query-ID>
<Iteration_query-def>YAL001C TFC3 SGDID:S000000001, Chr I from 151006-147594,151166-151097, Genome Release 64-1-1, reverse complement, Verified ORF, "Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauB domain of TFIIIC that binds DNA at the BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding"</Iteration_query-def>
<Iteration_query-len>3483</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gnl|BL_ORD_ID|0</Hit_id>
<Hit_def>YAL001C TFC3 SGDID:S000000001, Chr I from 151006-147594,151166-151097, Genome Release 64-1-1, reverse complement, Verified ORF, "Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauB domain of TFIIIC that binds DNA at the BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding"</Hit_def>
<Hit_accession>0</Hit_accession>
<Hit_len>1160</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>2265.73</Hsp_bit-score>
<Hsp_score>5870</Hsp_score>
<Hsp_evalue>0</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>3480</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>1160</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>1160</Hsp_identity>
<Hsp_positive>1160</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>1160</Hsp_align-len>
<Hsp_qseq>MVLTIYPDELVQIVSDKIASNKGKITLNQLWDISGKYFDLSDKKVKQFVLSCVILKKDIEVYCDGAITTKNVTDIIGDANHSYSVGITEDSLWTLLTGYTKKESTIGNSAFELLLEVAKSGEKGINTMDLAQVTGQDPRSVTGRIKKINHLLTSSQLIYKGHVVKQLKLKKFSHDGVDSNPYINIRDHLATIVEVVKRSKNGIRQIIDLKRELKFDKEKRLSKAFIAAIAWLDEKEYLKKVLVVSPKNPAIKIRCVKYVKDIPDSKGSPSFEYDSNSADEDSVSDSKAAFEDEDLVEGLDNFNATDLLQNQGLVMEEKEDAVKNEVLLNRFYPLQNQTYDIADKSGLKGISTMDVVNRITGKEFQRAFTKSSEYYLESVDKQKENTGGYRLFRIYDFEGKKKFFRLFTAQNFQKLTNAEDEISVPKGFDELGKSRTDLKTLNEDNFVALNNTVRFTTDSDGQDIFFWHGELXXXXXXXXXXXXXXXXRQVKNSTNASVAGNISNPKRIKLEQHVSTAQEPKSAEDSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKVMNTIGGVAYLREQFYESVSKYMGSTTTLDKKTVRGDVDLMVESEKLGARTEPVSGRKIIFLPTVGEDAIQRYILKEKDSKKATFTDVIHDTEIYFFDQTEKNRFHRGKKSVERIRKFQNRQKNAKIKASDDAISKKSTSVNVSDGKIKRRDKKVSAGRTTVVVENTKEDKTVYHAGTKDGVQALIRAVVVTKSIKNEIMWDKITKLFPNNSLDNLKKKWTARRVRMGHSGWRAYVDKWKKMLVLAIKSEKISLRDVEELDLIKLLDIWTSFDEKEIKRPLFLYKNYEENRKKFTLVRDDTLTHSGNDLAMSSMIQREISSLKKTYTRKISASTKDLSKSQSDDYIRTVIRSILIESPSTTRNEIEALKNVGNESIDNVIMDMAKEKQIYLHGSKLECTDTLPDILENRGNYKDFGVAFQYRCKVNELLEAGNAIVINQEPSDISSWVLIDLISGELLNMDVIPMVRNVRPLTYTSRRFEIRTLTPPLIIYANSQTKLNTARKSAVKVPLGKPFSRLWVNGSGSIRPNIWKQVVTMVVNEIIFHPGITLSRLQSRCREVLSLHEISEICKWLLERQVLITTDFDGYWVNHNWYSIYEST</Hsp_qseq>
<Hsp_hseq>MVLTIYPDELVQIVSDKIASNKGKITLNQLWDISGKYFDLSDKKVKQFVLSCVILKKDIEVYCDGAITTKNVTDIIGDANHSYSVGITEDSLWTLLTGYTKKESTIGNSAFELLLEVAKSGEKGINTMDLAQVTGQDPRSVTGRIKKINHLLTSSQLIYKGHVVKQLKLKKFSHDGVDSNPYINIRDHLATIVEVVKRSKNGIRQIIDLKRELKFDKEKRLSKAFIAAIAWLDEKEYLKKVLVVSPKNPAIKIRCVKYVKDIPDSKGSPSFEYDSNSADEDSVSDSKAAFEDEDLVEGLDNFNATDLLQNQGLVMEEKEDAVKNEVLLNRFYPLQNQTYDIADKSGLKGISTMDVVNRITGKEFQRAFTKSSEYYLESVDKQKENTGGYRLFRIYDFEGKKKFFRLFTAQNFQKLTNAEDEISVPKGFDELGKSRTDLKTLNEDNFVALNNTVRFTTDSDGQDIFFWHGELKIPPNSKKTPNKNKRKRQVKNSTNASVAGNISNPKRIKLEQHVSTAQEPKSAEDSPSSNGGTVVKGKVVNFGGFSARSLRSLQRQRAILKVMNTIGGVAYLREQFYESVSKYMGSTTTLDKKTVRGDVDLMVESEKLGARTEPVSGRKIIFLPTVGEDAIQRYILKEKDSKKATFTDVIHDTEIYFFDQTEKNRFHRGKKSVERIRKFQNRQKNAKIKASDDAISKKSTSVNVSDGKIKRRDKKVSAGRTTVVVENTKEDKTVYHAGTKDGVQALIRAVVVTKSIKNEIMWDKITKLFPNNSLDNLKKKWTARRVRMGHSGWRAYVDKWKKMLVLAIKSEKISLRDVEELDLIKLLDIWTSFDEKEIKRPLFLYKNYEENRKKFTLVRDDTLTHSGNDLAMSSMIQREISSLKKTYTRKISASTKDLSKSQSDDYIRTVIRSILIESPSTTRNEIEALKNVGNESIDNVIMDMAKEKQIYLHGSKLECTDTLPDILENRGNYKDFGVAFQYRCKVNELLEAGNAIVINQEPSDISSWVLIDLISGELLNMDVIPMVRNVRPLTYTSRRFEIRTLTPPLIIYANSQTKLNTARKSAVKVPLGKPFSRLWVNGSGSIRPNIWKQVVTMVVNEIIFHPGITLSRLQSRCREVLSLHEISEICKWLLERQVLITTDFDGYWVNHNWYSIYEST</Hsp_hseq>
<Hsp_midline>MVLTIYPDELVQIVSDKIASNKGKITLNQLWDISGKYFDLSDKKVKQFVLSCVILKKDIEVYCDGAITTKNVTDIIGDANHSYSVGITEDSLWTLLTGYTKKESTIGNSAFELLLEVAKSGEKGINTMDLAQVTGQDPRSVTGRIKKINHLLTSSQLIYKGHVVKQLKLKKFSHDGVDSNPYINIRDHLATIVEVVKRSKNGIRQIIDLKRELKFDKEKRLSKAFIAAIAWLDEKEYLKKVLVVSPKNPAIKIRCVKYVKDIPDSKGSPSFEYDSNSADEDSVSDSKAAFEDEDLVEGLDNFNATDLLQNQGLVMEEKEDAVKNEVLLNRFYPLQNQTYDIADKSGLKGISTMDVVNRITGKEFQRAFTKSSEYYLESVDKQKENTGGYRLFRIYDFEGKKKFFRLFTAQNFQKLTNAEDEISVPKGFDELGKSRTDLKTLNEDNFVALNNTVRFTTDSDGQDIFFWHGELKIPPNSKKTPNKNKRKRQVKNSTNASVAGNISNPKRIKLEQHVSTAQEPKSAEDSPSSNGGTVVKGKVVNFGGFSARSLRSLQRQRAILKVMNTIGGVAYLREQFYESVSKYMGSTTTLDKKTVRGDVDLMVESEKLGARTEPVSGRKIIFLPTVGEDAIQRYILKEKDSKKATFTDVIHDTEIYFFDQTEKNRFHRGKKSVERIRKFQNRQKNAKIKASDDAISKKSTSVNVSDGKIKRRDKKVSAGRTTVVVENTKEDKTVYHAGTKDGVQALIRAVVVTKSIKNEIMWDKITKLFPNNSLDNLKKKWTARRVRMGHSGWRAYVDKWKKMLVLAIKSEKISLRDVEELDLIKLLDIWTSFDEKEIKRPLFLYKNYEENRKKFTLVRDDTLTHSGNDLAMSSMIQREISSLKKTYTRKISASTKDLSKSQSDDYIRTVIRSILIESPSTTRNEIEALKNVGNESIDNVIMDMAKEKQIYLHGSKLECTDTLPDILENRGNYKDFGVAFQYRCKVNELLEAGNAIVINQEPSDISSWVLIDLISGELLNMDVIPMVRNVRPLTYTSRRFEIRTLTPPLIIYANSQTKLNTARKSAVKVPLGKPFSRLWVNGSGSIRPNIWKQVVTMVVNEIIFHPGITLSRLQSRCREVLSLHEISEICKWLLERQVLITTDFDGYWVNHNWYSIYEST</Hsp_midline>
</Hsp>
<Hsp>
<Hsp_num>2</Hsp_num>
<Hsp_bit-score>25.7942</Hsp_bit-score>
<Hsp_score>55</Hsp_score>
<Hsp_evalue>0.810432</Hsp_evalue>
<Hsp_query-from>1836</Hsp_query-from>
<Hsp_query-to>1898</Hsp_query-to>
<Hsp_hit-from>608</Hsp_hit-from>
<Hsp_hit-to>628</Hsp_hit-to>
<Hsp_query-frame>-2</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>10</Hsp_identity>
<Hsp_positive>12</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>21</Hsp_align-len>
<Hsp_qseq>LWMASSPTVGRKMIFLPLTGS</Hsp_qseq>
<Hsp_hseq>LGARTEPVSGRKIIFLPTVGE</Hsp_hseq>
<Hsp_midline>L + P GRK+IFLP G </Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gnl|BL_ORD_ID|92</Hit_id>
<Hit_def>YAR015W ADE1 SGDID:S000000070, Chr I from 169375-170295, Genome Release 64-1-1, Verified ORF, "N-succinyl-5-aminoimidazole-4-carboxamide ribotide (SAICAR) synthetase, required for 'de novo' purine nucleotide biosynthesis; red pigment accumulates in mutant cells deprived of adenine"</Hit_def>
<Hit_accession>92</Hit_accession>
<Hit_len>306</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>25.0238</Hsp_bit-score>
<Hsp_score>53</Hsp_score>
<Hsp_evalue>1.12994</Hsp_evalue>
<Hsp_query-from>661</Hsp_query-from>
<Hsp_query-to>885</Hsp_query-to>
<Hsp_hit-from>120</Hsp_hit-from>
<Hsp_hit-to>187</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>20</Hsp_identity>
<Hsp_positive>33</Hsp_positive>
<Hsp_gaps>7</Hsp_gaps>
<Hsp_align-len>75</Hsp_align-len>
<Hsp_qseq>LSKAFIAAIAWLDEKEYLKKVLVVSPKNPAIKIRCVKYVKDIPDSKGSPSFEYDSNSADEDSVSDSKAAFEDEDL</Hsp_qseq>
<Hsp_hseq>IVRGYITGSAW---KEYVKTGTVHGLKQP----QGLKESQEFPEPIFTPSTKAEQGEHDENISPAQAAELVGEDL</Hsp_hseq>
<Hsp_midline>+ + +I AW KEY+K V K P + +K ++ P+ +PS + + DE+ A EDL</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>gnl|BL_ORD_ID|25</Hit_id>
<Hit_def>YAL024C LTE1 SGDID:S000000022, Chr I from 105872-101565, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein similar to GDP/GTP exchange factors but without detectable GEF activity; required for asymmetric localization of Bfa1p at daughter-directed spindle pole bodies and for mitotic exit at low temperatures"</Hit_def>
<Hit_accession>25</Hit_accession>
<Hit_len>1435</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>22.7126</Hsp_bit-score>
<Hsp_score>47</Hsp_score>
<Hsp_evalue>7.01658</Hsp_evalue>
<Hsp_query-from>2755</Hsp_query-from>
<Hsp_query-to>2889</Hsp_query-to>
<Hsp_hit-from>254</Hsp_hit-from>
<Hsp_hit-to>298</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>15</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>45</Hsp_align-len>
<Hsp_qseq>PSTTRNEIEALKNVGNESIDNVIMDMAKEKQIYLHGSKLECTDTL</Hsp_qseq>
<Hsp_hseq>PDNTSNVYSKHRIAKEPSVDNESEDMSDSKQKISHLSKVTLVSTL</Hsp_hseq>
<Hsp_midline>P T N + S+DN DM+ KQ H SK+ TL</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>4</Hit_num>
<Hit_id>gnl|BL_ORD_ID|62</Hit_id>
<Hit_def>YAL054C ACS1 SGDID:S000000050, Chr I from 45022-42881, Genome Release 64-1-1, reverse complement, Verified ORF, "Acetyl-coA synthetase isoform which, along with Acs2p, is the nuclear source of acetyl-coA for histone acetylation; expressed during growth on nonfermentable carbon sources and under aerobic conditions"</Hit_def>
<Hit_accession>62</Hit_accession>
<Hit_len>713</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>22.7126</Hsp_bit-score>
<Hsp_score>47</Hsp_score>
<Hsp_evalue>7.79744</Hsp_evalue>
<Hsp_query-from>1354</Hsp_query-from>
<Hsp_query-to>1413</Hsp_query-to>
<Hsp_hit-from>344</Hsp_hit-from>
<Hsp_hit-to>363</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>8</Hsp_identity>
<Hsp_positive>15</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>20</Hsp_align-len>
<Hsp_qseq>TVRFTTDSDGQDIFFWHGEL</Hsp_qseq>
<Hsp_hseq>TMRYTFDTHQEDVFFTAGDI</Hsp_hseq>
<Hsp_midline>T+R+T D+ +D+FF G++</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>5</Hit_num>
<Hit_id>gnl|BL_ORD_ID|16</Hit_id>
<Hit_def>YAL016W TPD3 SGDID:S000000014, Chr I from 124879-126786, Genome Release 64-1-1, Verified ORF, "Regulatory subunit A of the heterotrimeric protein phosphatase 2A (PP2A), which also contains regulatory subunit Cdc55p and either catalytic subunit Pph21p or Pph22p; required for cell morphogenesis and transcription by RNA polymerase III"</Hit_def>
<Hit_accession>16</Hit_accession>
<Hit_len>635</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>22.3274</Hsp_bit-score>
<Hsp_score>46</Hsp_score>
<Hsp_evalue>8.98102</Hsp_evalue>
<Hsp_query-from>2281</Hsp_query-from>
<Hsp_query-to>2319</Hsp_query-to>
<Hsp_hit-from>94</Hsp_hit-from>
<Hsp_hit-to>106</Hsp_hit-to>
<Hsp_query-frame>-1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>8</Hsp_identity>
<Hsp_positive>10</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>13</Hsp_align-len>
<Hsp_qseq>AVVGEQLGDLVPH</Hsp_qseq>
<Hsp_hseq>AVLAEQLGKFVPY</Hsp_hseq>
<Hsp_midline>AV+ EQLG VP+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>105</Statistics_db-num>
<Statistics_db-len>46739</Statistics_db-len>
<Statistics_hsp-len>72</Statistics_hsp-len>
<Statistics_eff-space>42807501</Statistics_eff-space>
<Statistics_kappa>0.041</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>2</Iteration_iter-num>
<Iteration_query-ID>Query_2</Iteration_query-ID>
<Iteration_query-def>YAL002W VPS8 SGDID:S000000002, Chr I from 143707-147531, Genome Release 64-1-1, Verified ORF, "Membrane-associated protein that interacts with Vps21p to facilitate soluble vacuolar protein localization; component of the CORVET complex; required for localization and trafficking of the CPY sorting receptor; contains RING finger motif"</Iteration_query-def>
<Iteration_query-len>3825</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gnl|BL_ORD_ID|1</Hit_id>
<Hit_def>YAL002W VPS8 SGDID:S000000002, Chr I from 143707-147531, Genome Release 64-1-1, Verified ORF, "Membrane-associated protein that interacts with Vps21p to facilitate soluble vacuolar protein localization; component of the CORVET complex; required for localization and trafficking of the CPY sorting receptor; contains RING finger motif"</Hit_def>
<Hit_accession>1</Hit_accession>
<Hit_len>1274</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>2542.69</Hsp_bit-score>
<Hsp_score>6589</Hsp_score>
<Hsp_evalue>0</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>3822</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>1274</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>1274</Hsp_identity>
<Hsp_positive>1274</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>1274</Hsp_align-len>
<Hsp_qseq>MEQNGLDHDSRSSIDTTINDTQKTFLEFRSYTQLSEKLASSSSYTAPPLNEDGPKGVASAVSQGSESVVSWTTLTHVYSILGAYGGPTCLYPTATYFLMGTSKGCVLIFNYNEHLQTILVPTLSEDPSIHSIRSPVKSIVICSDGTHVAASYETGNICIWNLNVGYRVKPTSEPTNGMTPTPALPAVLHIDDHVNKEITGLDFFGARHTALIVSDRTGKVSLYNGYRRGFWQLVYNSKKILDVNSSKEKLIRSKLSPLISREKISTNLLSVLTTTHFALILLSPHVSLMFQETVEPSVQNSLVVNSSISWTQNCSRVAYXXXXXXXXXXXXXXXXXXQSASHSPEFAESILSIQWIDQLLLGVLTISHQFLVLHPQHDFKILLRLDFLIHDLMIPPNKYFVISRRSFYLLTNYSFKIGKFVSWSDITLRHILKGDYLGALEFIESLLQPYCPLANLLKLDNNTEERTKQLMEPFYNLSLAALRFLIKKDNADYNRXXXXXXXXXXXXXXSSKKLDSIPSLDVFLEQGLEFFELKDNAVYFEVVANIVAQGSVTSISPVLFRSIIDYYAKEENLKVIEDLIIMLNPTTLDVDLAVKLCQKYNLFDLLIYIWNKIFDDYQTPVVDLIYRISNQSEKCVIFNGPQVPPETTIFDYVTYILTGRQYPQNLSISPSDKCSKIQRELSAFIFSGFSIKWPSNSNHKLYICENPEEEPAFPYFHLLLKSNPSRFLAMLNEVFEASLFNDDNDMVASVGEAELVSRQYVIDLLLDAMKDTGNSDNIRVLVAIFIATSISKYPQFIKVSNQALDCVVNTICSSRVQGIYEISQIALESLLPYYHSRTTENFILELKEKNFNKVLFHIYKSENKYASALSLILETKDIEKEYNTDIVSITDYILKKCPPGSLECGKVTEVIETNFDLLLSRIGIEKCVTIFSDFDYNLHQEILEVKNEETQQKYLDKLFSTPNINNKVDKRLRNLHIELNCKYKSKREMILWLNGTVLSNAESLQILDLLNQDSNFEAAAIIHERLESFNLAVRDLLSFIEQCLNEGKTNISTLLESLRRAFDDCNSAGTEKKSCWILLITFLITLYGKYPSHDERKDLCNKLLQEAFLGLVRSKSSSQKDSGGEFWEIMSSVLEHQDVILMKVQDLKQLLLNVFNTYKLERSLSELIQKIIEDSSQDLVQQYRKFLSEGWSIHTDDCEICGKKIWGAGLDPLLFLAWENVQRHQDMISVDLKTPLVIFKCHHGFHQTCLENLAQKPDEYSCLICQTESNPKIV</Hsp_qseq>
<Hsp_hseq>MEQNGLDHDSRSSIDTTINDTQKTFLEFRSYTQLSEKLASSSSYTAPPLNEDGPKGVASAVSQGSESVVSWTTLTHVYSILGAYGGPTCLYPTATYFLMGTSKGCVLIFNYNEHLQTILVPTLSEDPSIHSIRSPVKSIVICSDGTHVAASYETGNICIWNLNVGYRVKPTSEPTNGMTPTPALPAVLHIDDHVNKEITGLDFFGARHTALIVSDRTGKVSLYNGYRRGFWQLVYNSKKILDVNSSKEKLIRSKLSPLISREKISTNLLSVLTTTHFALILLSPHVSLMFQETVEPSVQNSLVVNSSISWTQNCSRVAYSVNNKISVISISSSDFNVQSASHSPEFAESILSIQWIDQLLLGVLTISHQFLVLHPQHDFKILLRLDFLIHDLMIPPNKYFVISRRSFYLLTNYSFKIGKFVSWSDITLRHILKGDYLGALEFIESLLQPYCPLANLLKLDNNTEERTKQLMEPFYNLSLAALRFLIKKDNADYNRVYQLLMVVVRVLQQSSKKLDSIPSLDVFLEQGLEFFELKDNAVYFEVVANIVAQGSVTSISPVLFRSIIDYYAKEENLKVIEDLIIMLNPTTLDVDLAVKLCQKYNLFDLLIYIWNKIFDDYQTPVVDLIYRISNQSEKCVIFNGPQVPPETTIFDYVTYILTGRQYPQNLSISPSDKCSKIQRELSAFIFSGFSIKWPSNSNHKLYICENPEEEPAFPYFHLLLKSNPSRFLAMLNEVFEASLFNDDNDMVASVGEAELVSRQYVIDLLLDAMKDTGNSDNIRVLVAIFIATSISKYPQFIKVSNQALDCVVNTICSSRVQGIYEISQIALESLLPYYHSRTTENFILELKEKNFNKVLFHIYKSENKYASALSLILETKDIEKEYNTDIVSITDYILKKCPPGSLECGKVTEVIETNFDLLLSRIGIEKCVTIFSDFDYNLHQEILEVKNEETQQKYLDKLFSTPNINNKVDKRLRNLHIELNCKYKSKREMILWLNGTVLSNAESLQILDLLNQDSNFEAAAIIHERLESFNLAVRDLLSFIEQCLNEGKTNISTLLESLRRAFDDCNSAGTEKKSCWILLITFLITLYGKYPSHDERKDLCNKLLQEAFLGLVRSKSSSQKDSGGEFWEIMSSVLEHQDVILMKVQDLKQLLLNVFNTYKLERSLSELIQKIIEDSSQDLVQQYRKFLSEGWSIHTDDCEICGKKIWGAGLDPLLFLAWENVQRHQDMISVDLKTPLVIFKCHHGFHQTCLENLAQKPDEYSCLICQTESNPKIV</Hsp_hseq>
<Hsp_midline>MEQNGLDHDSRSSIDTTINDTQKTFLEFRSYTQLSEKLASSSSYTAPPLNEDGPKGVASAVSQGSESVVSWTTLTHVYSILGAYGGPTCLYPTATYFLMGTSKGCVLIFNYNEHLQTILVPTLSEDPSIHSIRSPVKSIVICSDGTHVAASYETGNICIWNLNVGYRVKPTSEPTNGMTPTPALPAVLHIDDHVNKEITGLDFFGARHTALIVSDRTGKVSLYNGYRRGFWQLVYNSKKILDVNSSKEKLIRSKLSPLISREKISTNLLSVLTTTHFALILLSPHVSLMFQETVEPSVQNSLVVNSSISWTQNCSRVAYSVNNKISVISISSSDFNVQSASHSPEFAESILSIQWIDQLLLGVLTISHQFLVLHPQHDFKILLRLDFLIHDLMIPPNKYFVISRRSFYLLTNYSFKIGKFVSWSDITLRHILKGDYLGALEFIESLLQPYCPLANLLKLDNNTEERTKQLMEPFYNLSLAALRFLIKKDNADYNRVYQLLMVVVRVLQQSSKKLDSIPSLDVFLEQGLEFFELKDNAVYFEVVANIVAQGSVTSISPVLFRSIIDYYAKEENLKVIEDLIIMLNPTTLDVDLAVKLCQKYNLFDLLIYIWNKIFDDYQTPVVDLIYRISNQSEKCVIFNGPQVPPETTIFDYVTYILTGRQYPQNLSISPSDKCSKIQRELSAFIFSGFSIKWPSNSNHKLYICENPEEEPAFPYFHLLLKSNPSRFLAMLNEVFEASLFNDDNDMVASVGEAELVSRQYVIDLLLDAMKDTGNSDNIRVLVAIFIATSISKYPQFIKVSNQALDCVVNTICSSRVQGIYEISQIALESLLPYYHSRTTENFILELKEKNFNKVLFHIYKSENKYASALSLILETKDIEKEYNTDIVSITDYILKKCPPGSLECGKVTEVIETNFDLLLSRIGIEKCVTIFSDFDYNLHQEILEVKNEETQQKYLDKLFSTPNINNKVDKRLRNLHIELNCKYKSKREMILWLNGTVLSNAESLQILDLLNQDSNFEAAAIIHERLESFNLAVRDLLSFIEQCLNEGKTNISTLLESLRRAFDDCNSAGTEKKSCWILLITFLITLYGKYPSHDERKDLCNKLLQEAFLGLVRSKSSSQKDSGGEFWEIMSSVLEHQDVILMKVQDLKQLLLNVFNTYKLERSLSELIQKIIEDSSQDLVQQYRKFLSEGWSIHTDDCEICGKKIWGAGLDPLLFLAWENVQRHQDMISVDLKTPLVIFKCHHGFHQTCLENLAQKPDEYSCLICQTESNPKIV</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gnl|BL_ORD_ID|58</Hit_id>
<Hit_def>YAL048C GEM1 SGDID:S000000046, Chr I from 54789-52801, Genome Release 64-1-1, reverse complement, Verified ORF, "Evolutionarily-conserved tail-anchored outer mitochondrial membrane GTPase which regulates mitochondrial morphology; cells lacking Gem1p contain collapsed, globular, or grape-like mitochondria; not required for pheromone-induced cell death"</Hit_def>
<Hit_accession>58</Hit_accession>
<Hit_len>662</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>23.483</Hsp_bit-score>
<Hsp_score>49</Hsp_score>
<Hsp_evalue>4.59653</Hsp_evalue>
<Hsp_query-from>2092</Hsp_query-from>
<Hsp_query-to>2310</Hsp_query-to>
<Hsp_hit-from>173</Hsp_hit-from>
<Hsp_hit-to>255</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>22</Hsp_identity>
<Hsp_positive>34</Hsp_positive>
<Hsp_gaps>16</Hsp_gaps>
<Hsp_align-len>86</Hsp_align-len>
<Hsp_qseq>NHKLYICENPEEEPAFPYFHLLLKSNPSRFLAMLNEVFEASLFN-----DDNDMVA--------SVGEAELVSRQYVIDLLLDAMK</Hsp_qseq>
<Hsp_hseq>NQAFYLCQRAITHPISPLFDAMVGELKPLAVMALKRIFLLSDLNQDSYLDDNEILGLQKKCFNKSIDVNEL---NFIKDLLLDISK</Hsp_hseq>
<Hsp_midline>N Y+C+ P P F ++ + L +F S N DDN+++ S+ EL ++ DLLLD K</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>gnl|BL_ORD_ID|48</Hit_id>
<Hit_def>YAL041W CDC24 SGDID:S000000039, Chr I from 62840-65404, Genome Release 64-1-1, Verified ORF, "Guanine nucleotide exchange factor (GEF or GDP-release factor) for Cdc42p; required for polarity establishment and maintenance, and mutants have morphological defects in bud formation and shmooing"</Hit_def>
<Hit_accession>48</Hit_accession>
<Hit_len>854</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>23.483</Hsp_bit-score>
<Hsp_score>49</Hsp_score>
<Hsp_evalue>4.75072</Hsp_evalue>
<Hsp_query-from>1753</Hsp_query-from>
<Hsp_query-to>1866</Hsp_query-to>
<Hsp_hit-from>150</Hsp_hit-from>
<Hsp_hit-to>187</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>10</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>38</Hsp_align-len>
<Hsp_qseq>PTTLDVDLAVKLCQKYNLFDLLIYIWNKIFDDYQTPVV</Hsp_qseq>
<Hsp_hseq>PITMDCDPVTQLSQLFQQGAPLCILFNSVKPQFKLPVI</Hsp_hseq>
<Hsp_midline>P T+D D +L Q + L ++N + ++ PV+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>4</Hit_num>
<Hit_id>gnl|BL_ORD_ID|19</Hit_id>
<Hit_def>YAL019W FUN30 SGDID:S000000017, Chr I from 114919-118314, Genome Release 64-1-1, Verified ORF, "Conserved member of the Snf2p family with ATP-dependent chromatin remodeling activity; has a role in silencing; potential Cdc28p substrate; authentic, non-tagged protein is detected in purified mitochondria in high-throughput studies"</Hit_def>
<Hit_accession>19</Hit_accession>
<Hit_len>1131</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>23.0978</Hsp_bit-score>
<Hsp_score>48</Hsp_score>
<Hsp_evalue>6.57083</Hsp_evalue>
<Hsp_query-from>1882</Hsp_query-from>
<Hsp_query-to>2031</Hsp_query-to>
<Hsp_hit-from>154</Hsp_hit-from>
<Hsp_hit-to>201</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>17</Hsp_identity>
<Hsp_positive>29</Hsp_positive>
<Hsp_gaps>10</Hsp_gaps>
<Hsp_align-len>54</Hsp_align-len>
<Hsp_qseq>ISNQSEKCVIFNGPQVPPETTIFDYVTYILTGRQY----PQNLSISPSDKCSKI</Hsp_qseq>
<Hsp_hseq>INNKSSKITV-----AKQKTSIFDRYSNVINQKQYTFELPTNLNID-SEALSKL</Hsp_hseq>
<Hsp_midline>I+N+S K + +T+IFD + ++ +QY P NL+I S+ SK+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>5</Hit_num>
<Hit_id>gnl|BL_ORD_ID|86</Hit_id>
<Hit_def>YAR003W SWD1 SGDID:S000000064, Chr I from 155005-156285, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7"</Hit_def>
<Hit_accession>86</Hit_accession>
<Hit_len>426</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>22.7126</Hsp_bit-score>
<Hsp_score>47</Hsp_score>
<Hsp_evalue>9.00466</Hsp_evalue>
<Hsp_query-from>169</Hsp_query-from>
<Hsp_query-to>447</Hsp_query-to>
<Hsp_hit-from>150</Hsp_hit-from>
<Hsp_hit-to>230</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>25</Hsp_identity>
<Hsp_positive>45</Hsp_positive>
<Hsp_gaps>22</Hsp_gaps>
<Hsp_align-len>98</Hsp_align-len>
<Hsp_qseq>VASAVSQGSESVVSWTTLTHVYSILGAYGGPTCLYPTA--TYFLMGTSKGCVLIFNYNEHLQTILVPTLSEDPSIHSIR---SPVKSIVICSDGTHVA</Hsp_qseq>
<Hsp_hseq>VASLLSKSDEKQLS-STPDHGYVLV-------CTVHTKHPNIIIVGTSKGWLDFYKFHSLYQT---------ECIHSLKITSSNIKHLIVSQNGERLA</Hsp_hseq>
<Hsp_midline>VAS +S+ E +S +T H Y ++ C T ++GTSKG + + ++ QT IHS++ S +K +++ +G +A</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>105</Statistics_db-num>
<Statistics_db-len>46739</Statistics_db-len>
<Statistics_hsp-len>72</Statistics_hsp-len>
<Statistics_eff-space>47288727</Statistics_eff-space>
<Statistics_kappa>0.041</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>3</Iteration_iter-num>
<Iteration_query-ID>Query_3</Iteration_query-ID>
<Iteration_query-def>YAL003W EFB1 SGDID:S000000003, Chr I from 142174-142253,142620-143160, Genome Release 64-1-1, Verified ORF, "Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site"</Iteration_query-def>
<Iteration_query-len>621</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gnl|BL_ORD_ID|2</Hit_id>
<Hit_def>YAL003W EFB1 SGDID:S000000003, Chr I from 142174-142253,142620-143160, Genome Release 64-1-1, Verified ORF, "Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site"</Hit_def>
<Hit_accession>2</Hit_accession>
<Hit_len>206</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>295.434</Hsp_bit-score>
<Hsp_score>755</Hsp_score>
<Hsp_evalue>1.20397e-103</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>618</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>206</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>206</Hsp_identity>
<Hsp_positive>206</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>206</Hsp_align-len>
<Hsp_qseq>MASTDFSKIETLKQLNASLADKSYIEGTAVSQADVTVFKAFQSAYPEFSRWFNHIASKXXXXXXXXXXXXXXXXXXXXXXVDLFGSXXXXXXXXXXKLKAERIXXXXXXXXXXXXXXXXXSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQSIEEDEDHVQSTDIAAMQKL</Hsp_qseq>
<Hsp_hseq>MASTDFSKIETLKQLNASLADKSYIEGTAVSQADVTVFKAFQSAYPEFSRWFNHIASKADEFDSFPAASAAAAEEEEDDDVDLFGSDDEEADAEAEKLKAERIAAYNAKKAAKPAKPAAKSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQSIEEDEDHVQSTDIAAMQKL</Hsp_hseq>
<Hsp_midline>MASTDFSKIETLKQLNASLADKSYIEGTAVSQADVTVFKAFQSAYPEFSRWFNHIASKADEFDSFPAASAAAAEEEEDDDVDLFGSDDEEADAEAEKLKAERIAAYNAKKAAKPAKPAAKSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQSIEEDEDHVQSTDIAAMQKL</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gnl|BL_ORD_ID|81</Hit_id>
<Hit_def>YAL068C PAU8 SGDID:S000002142, Chr I from 2169-1807, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions"</Hit_def>
<Hit_accession>81</Hit_accession>
<Hit_len>120</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>20.4014</Hsp_bit-score>
<Hsp_score>41</Hsp_score>
<Hsp_evalue>3.94955</Hsp_evalue>
<Hsp_query-from>426</Hsp_query-from>
<Hsp_query-to>479</Hsp_query-to>
<Hsp_hit-from>94</Hsp_hit-from>
<Hsp_hit-to>111</Hsp_hit-to>
<Hsp_query-frame>-2</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>6</Hsp_identity>
<Hsp_positive>14</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>18</Hsp_align-len>
<Hsp_qseq>GMNWWAPQVRPSISMAFT</Hsp_qseq>
<Hsp_hseq>GVPWYSSRLKPAISSALS</Hsp_hseq>
<Hsp_midline>G+ W++ +++P+IS A +</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>gnl|BL_ORD_ID|62</Hit_id>
<Hit_def>YAL054C ACS1 SGDID:S000000050, Chr I from 45022-42881, Genome Release 64-1-1, reverse complement, Verified ORF, "Acetyl-coA synthetase isoform which, along with Acs2p, is the nuclear source of acetyl-coA for histone acetylation; expressed during growth on nonfermentable carbon sources and under aerobic conditions"</Hit_def>
<Hit_accession>62</Hit_accession>
<Hit_len>713</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>20.4014</Hsp_bit-score>
<Hsp_score>41</Hsp_score>
<Hsp_evalue>4.80138</Hsp_evalue>
<Hsp_query-from>118</Hsp_query-from>
<Hsp_query-to>162</Hsp_query-to>
<Hsp_hit-from>524</Hsp_hit-from>
<Hsp_hit-to>540</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>8</Hsp_identity>
<Hsp_positive>12</Hsp_positive>
<Hsp_gaps>2</Hsp_gaps>
<Hsp_align-len>17</Hsp_align-len>
<Hsp_qseq>AFQSAYPEFSR--WFNH</Hsp_qseq>
<Hsp_hseq>AVKAAWPSFARTIWKNH</Hsp_hseq>
<Hsp_midline>A ++A+P F+R W NH</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>4</Hit_num>
<Hit_id>gnl|BL_ORD_ID|66</Hit_id>
<Hit_def>YAL056W GPB2 SGDID:S000000052, Chr I from 39259-41901, Genome Release 64-1-1, Verified ORF, "Multistep regulator of cAMP-PKA signaling; inhibits PKA downstream of Gpa2p and Cyr1p, thereby increasing cAMP dependency; inhibits Ras activity through direct interactions with Ira1p/2p; regulated by G-alpha protein Gpa2p; homolog of Gpb1p"</Hit_def>
<Hit_accession>66</Hit_accession>
<Hit_len>880</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>20.4014</Hsp_bit-score>
<Hsp_score>41</Hsp_score>
<Hsp_evalue>5.59908</Hsp_evalue>
<Hsp_query-from>91</Hsp_query-from>
<Hsp_query-to>165</Hsp_query-to>
<Hsp_hit-from>421</Hsp_hit-from>
<Hsp_hit-to>445</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>8</Hsp_identity>
<Hsp_positive>14</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>25</Hsp_align-len>
<Hsp_qseq>SQADVTVFKAFQSAYPEFSRWFNHI</Hsp_qseq>
<Hsp_hseq>TKIDIIVQPSKYNAYPTMSSRFGHL</Hsp_hseq>
<Hsp_midline>++ D+ V + +AYP S F H+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>105</Statistics_db-num>
<Statistics_db-len>46739</Statistics_db-len>
<Statistics_hsp-len>58</Statistics_hsp-len>
<Statistics_eff-space>6076071</Statistics_eff-space>
<Statistics_kappa>0.041</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>4</Iteration_iter-num>
<Iteration_query-ID>Query_4</Iteration_query-ID>
<Iteration_query-def>YAL004W YAL004W SGDID:S000002136, Chr I from 140760-141407, Genome Release 64-1-1, Dubious ORF, "Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps verified gene SSA1/YAL005C"</Iteration_query-def>
<Iteration_query-len>648</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gnl|BL_ORD_ID|3</Hit_id>
<Hit_def>YAL004W YAL004W SGDID:S000002136, Chr I from 140760-141407, Genome Release 64-1-1, Dubious ORF, "Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps verified gene SSA1/YAL005C"</Hit_def>
<Hit_accession>3</Hit_accession>
<Hit_len>215</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>389.808</Hsp_bit-score>
<Hsp_score>1000</Hsp_score>
<Hsp_evalue>1.47667e-140</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>645</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>215</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>215</Hsp_identity>
<Hsp_positive>215</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>215</Hsp_align-len>
<Hsp_qseq>MGVTSGGLNFKDTVFNGQQRDIESTTTQVENQDVFFLTLLVQTVSNGSGGRFVNNTQDIQTSNGTSILGSLSLRIVEVSWDSDDSVIDLGSQVRFGSFLHLTQDHGGDLFWGKVLGFTLKFNLNLRLTVNIDQLEWEVLHVSLHFWVVEVSTDQTLSVENGXXXXXXXXXXXXXTNQSFSVSESDKRWSGSVTLIVGNNVHTIISKVSNTRVCCT</Hsp_qseq>
<Hsp_hseq>MGVTSGGLNFKDTVFNGQQRDIESTTTQVENQDVFFLTLLVQTVSNGSGGRFVNNTQDIQTSNGTSILGSLSLRIVEVSWDSDDSVIDLGSQVRFGSFLHLTQDHGGDLFWGKVLGFTLKFNLNLRLTVNIDQLEWEVLHVSLHFWVVEVSTDQTLSVENGIRRIHSSLILSSITNQSFSVSESDKRWSGSVTLIVGNNVHTIISKVSNTRVCCT</Hsp_hseq>
<Hsp_midline>MGVTSGGLNFKDTVFNGQQRDIESTTTQVENQDVFFLTLLVQTVSNGSGGRFVNNTQDIQTSNGTSILGSLSLRIVEVSWDSDDSVIDLGSQVRFGSFLHLTQDHGGDLFWGKVLGFTLKFNLNLRLTVNIDQLEWEVLHVSLHFWVVEVSTDQTLSVENGIRRIHSSLILSSITNQSFSVSESDKRWSGSVTLIVGNNVHTIISKVSNTRVCCT</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gnl|BL_ORD_ID|4</Hit_id>
<Hit_def>YAL005C SSA1 SGDID:S000000004, Chr I from 141431-139503, Genome Release 64-1-1, reverse complement, Verified ORF, "ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall; 98% identical with Ssa2p, but subtle differences between the two proteins provide functional specificity with respect to propagation of yeast [URE3] prions and vacuolar-mediated degradations of gluconeogenesis enzymes"</Hit_def>
<Hit_accession>4</Hit_accession>
<Hit_len>642</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>117.857</Hsp_bit-score>
<Hsp_score>294</Hsp_score>
<Hsp_evalue>1.759e-32</Hsp_evalue>
<Hsp_query-from>241</Hsp_query-from>
<Hsp_query-to>645</Hsp_query-to>
<Hsp_hit-from>10</Hsp_hit-from>
<Hsp_hit-to>144</Hsp_hit-to>
<Hsp_query-frame>-1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>62</Hsp_identity>
<Hsp_positive>97</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>135</Hsp_align-len>
<Hsp_qseq>GAAHPGVAHLADDGVHVVAHDQGXXXXXXXXXXXXXXXXVGXXXXXXXXXXXXXXVLHAQGLVGAHLHHPEVQAHVQHLPLQLVDVHGQPQVQVELQGEAQHLAPEQVAAVVLGQVQEAAEPHLAAQVDHAVVAV</Hsp_qseq>
<Hsp_hseq>GTTYSCVAHFANDRVDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPSNTVFDAKRLIGRNFNDPEVQADMKHFPFKLIDVDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTV</Hsp_hseq>
<Hsp_midline>G + VAH A+D V ++A+DQG+ P VA E L+GDAA++QAA++P + V A+ L+G + + PEVQA ++H P +L+DV G+PQ+QVE +GE ++ PEQ++++VLG+++E AE +L A+V+ AVV V</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>gnl|BL_ORD_ID|16</Hit_id>
<Hit_def>YAL016W TPD3 SGDID:S000000014, Chr I from 124879-126786, Genome Release 64-1-1, Verified ORF, "Regulatory subunit A of the heterotrimeric protein phosphatase 2A (PP2A), which also contains regulatory subunit Cdc55p and either catalytic subunit Pph21p or Pph22p; required for cell morphogenesis and transcription by RNA polymerase III"</Hit_def>
<Hit_accession>16</Hit_accession>
<Hit_len>635</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>23.483</Hsp_bit-score>
<Hsp_score>49</Hsp_score>
<Hsp_evalue>0.571885</Hsp_evalue>
<Hsp_query-from>601</Hsp_query-from>
<Hsp_query-to>633</Hsp_query-to>
<Hsp_hit-from>560</Hsp_hit-from>
<Hsp_hit-to>570</Hsp_hit-to>
<Hsp_query-frame>-1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>8</Hsp_identity>
<Hsp_positive>10</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>11</Hsp_align-len>
<Hsp_qseq>PGVAHLADDGV</Hsp_qseq>
<Hsp_hseq>PFISHLADDGV</Hsp_hseq>
<Hsp_midline>P ++HLADDGV</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>4</Hit_num>
<Hit_id>gnl|BL_ORD_ID|29</Hit_id>
<Hit_def>YAL027W SAW1 SGDID:S000000025, Chr I from 94687-95472, Genome Release 64-1-1, Verified ORF, "Protein involved in Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during double-strand break repair via single-strand annealing; green fluorescent protein (GFP)-fusion protein localizes to the nucleus"</Hit_def>
<Hit_accession>29</Hit_accession>
<Hit_len>261</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>22.7126</Hsp_bit-score>
<Hsp_score>47</Hsp_score>
<Hsp_evalue>1.00986</Hsp_evalue>
<Hsp_query-from>154</Hsp_query-from>
<Hsp_query-to>327</Hsp_query-to>
<Hsp_hit-from>21</Hsp_hit-from>
<Hsp_hit-to>73</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>18</Hsp_identity>
<Hsp_positive>30</Hsp_positive>
<Hsp_gaps>5</Hsp_gaps>
<Hsp_align-len>58</Hsp_align-len>
<Hsp_qseq>FVNNTQDIQTSNGTSILGSLSLRIVEVSWDSDDSVIDLGSQVRFGSFLHLTQDHGGDL</Hsp_qseq>
<Hsp_hseq>FVNRKQILQTNDKTS--NKSNATIFEAPLLSNNSIICLKSP---NTRIYLSQQDKKNL</Hsp_hseq>
<Hsp_midline>FVN Q +QT++ TS + I E S++S+I L S + ++L+Q +L</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>5</Hit_num>
<Hit_id>gnl|BL_ORD_ID|27</Hit_id>
<Hit_def>YAL026C DRS2 SGDID:S000000024, Chr I from 99697-95630, Genome Release 64-1-1, reverse complement, Verified ORF, "Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secretory vesicles; contributes to clathrin-coated vesicle formation and endocytosis; mutations in human homolog ATP8B1 result in liver disease"</Hit_def>
<Hit_accession>27</Hit_accession>
<Hit_len>1355</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>21.9422</Hsp_bit-score>
<Hsp_score>45</Hsp_score>
<Hsp_evalue>1.83584</Hsp_evalue>
<Hsp_query-from>379</Hsp_query-from>
<Hsp_query-to>483</Hsp_query-to>
<Hsp_hit-from>565</Hsp_hit-from>
<Hsp_hit-to>597</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>23</Hsp_positive>
<Hsp_gaps>2</Hsp_gaps>
<Hsp_align-len>35</Hsp_align-len>
<Hsp_qseq>LTVNIDQLEWEVLHVSLHFWVVEVSTDQTLSVENG</Hsp_qseq>
<Hsp_hseq>LTRNI--MEFKSCSIAGHCYIDKIPEDKTATVEDG</Hsp_hseq>
<Hsp_midline>LT NI +E++ ++ H ++ ++ D+T +VE+G</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>6</Hit_num>
<Hit_id>gnl|BL_ORD_ID|1</Hit_id>
<Hit_def>YAL002W VPS8 SGDID:S000000002, Chr I from 143707-147531, Genome Release 64-1-1, Verified ORF, "Membrane-associated protein that interacts with Vps21p to facilitate soluble vacuolar protein localization; component of the CORVET complex; required for localization and trafficking of the CPY sorting receptor; contains RING finger motif"</Hit_def>
<Hit_accession>1</Hit_accession>
<Hit_len>1274</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>20.4014</Hsp_bit-score>
<Hsp_score>41</Hsp_score>
<Hsp_evalue>5.67911</Hsp_evalue>
<Hsp_query-from>315</Hsp_query-from>
<Hsp_query-to>365</Hsp_query-to>
<Hsp_hit-from>164</Hsp_hit-from>
<Hsp_hit-to>180</Hsp_hit-to>
<Hsp_query-frame>-2</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>7</Hsp_identity>
<Hsp_positive>11</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>17</Hsp_align-len>
<Hsp_qseq>LNFRVKPSTLPQNRSPP</Hsp_qseq>
<Hsp_hseq>VGYRVKPTSEPTNGMTP</Hsp_hseq>
<Hsp_midline>+ +RVKP++ P N P</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>7</Hit_num>
<Hit_id>gnl|BL_ORD_ID|40</Hit_id>
<Hit_def>YAL035W FUN12 SGDID:S000000033, Chr I from 76427-79435, Genome Release 64-1-1, Verified ORF, "GTPase, required for general translation initiation by promoting Met-tRNAiMet binding to ribosomes and ribosomal subunit joining; homolog of bacterial IF2"</Hit_def>
<Hit_accession>40</Hit_accession>
<Hit_len>1002</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>20.0162</Hsp_bit-score>
<Hsp_score>40</Hsp_score>
<Hsp_evalue>6.81525</Hsp_evalue>
<Hsp_query-from>300</Hsp_query-from>
<Hsp_query-to>431</Hsp_query-to>
<Hsp_hit-from>904</Hsp_hit-from>
<Hsp_hit-to>947</Hsp_hit-to>
<Hsp_query-frame>3</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>12</Hsp_identity>
<Hsp_positive>18</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>44</Hsp_align-len>
<Hsp_qseq>PDPGPRRRPVLGQGAGLHPEVQPEPEADREHRPAGVGGAAREPA</Hsp_qseq>
<Hsp_hseq>PTTKERQTLILGKVISLEINHQPVQEVKKGQTAAGVAVRLEDPS</Hsp_hseq>
<Hsp_midline>P R+ +LG+ L QP E + AGV +P+</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>105</Statistics_db-num>
<Statistics_db-len>46739</Statistics_db-len>
<Statistics_hsp-len>58</Statistics_hsp-len>
<Statistics_eff-space>6443082</Statistics_eff-space>
<Statistics_kappa>0.041</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>5</Iteration_iter-num>
<Iteration_query-ID>Query_5</Iteration_query-ID>
<Iteration_query-def>YAL005C SSA1 SGDID:S000000004, Chr I from 141431-139503, Genome Release 64-1-1, reverse complement, Verified ORF, "ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall; 98% identical with Ssa2p, but subtle differences between the two proteins provide functional specificity with respect to propagation of yeast [URE3] prions and vacuolar-mediated degradations of gluconeogenesis enzymes"</Iteration_query-def>
<Iteration_query-len>1929</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gnl|BL_ORD_ID|4</Hit_id>
<Hit_def>YAL005C SSA1 SGDID:S000000004, Chr I from 141431-139503, Genome Release 64-1-1, reverse complement, Verified ORF, "ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall; 98% identical with Ssa2p, but subtle differences between the two proteins provide functional specificity with respect to propagation of yeast [URE3] prions and vacuolar-mediated degradations of gluconeogenesis enzymes"</Hit_def>
<Hit_accession>4</Hit_accession>
<Hit_len>642</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>1153.27</Hsp_bit-score>
<Hsp_score>2982</Hsp_score>
<Hsp_evalue>0</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>1821</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>607</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>607</Hsp_identity>
<Hsp_positive>607</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>607</Hsp_align-len>
<Hsp_qseq>MSKAVGIDLGTTYSCVAHFANDRVDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPSNTVFDAKRLIGRNFNDPEVQADMKHFPFKLIDVDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKGKEEHVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEXXXXXXXXXXXILTGDESSKTQDXXXXXXXXXXXGIETAGGVMTKLIPRNSTIPTKKSEIFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILNVSAVEKGTGKSNKITITNDKGRLSKEDIEKMVXXXXXXXXXXXXXSQRIASKNQLESIAYSLKNTISEAGDKLEQADKDTVTKKAEETISWLDSNTTASKEEFDDKLKELQDIANPIMSKLYQ</Hsp_qseq>
<Hsp_hseq>MSKAVGIDLGTTYSCVAHFANDRVDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPSNTVFDAKRLIGRNFNDPEVQADMKHFPFKLIDVDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKGKEEHVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEIFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILNVSAVEKGTGKSNKITITNDKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNTISEAGDKLEQADKDTVTKKAEETISWLDSNTTASKEEFDDKLKELQDIANPIMSKLYQ</Hsp_hseq>
<Hsp_midline>MSKAVGIDLGTTYSCVAHFANDRVDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPSNTVFDAKRLIGRNFNDPEVQADMKHFPFKLIDVDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKGKEEHVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEIFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILNVSAVEKGTGKSNKITITNDKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNTISEAGDKLEQADKDTVTKKAEETISWLDSNTTASKEEFDDKLKELQDIANPIMSKLYQ</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gnl|BL_ORD_ID|61</Hit_id>
<Hit_def>YAL053W FLC2 SGDID:S000000049, Chr I from 45899-48250, Genome Release 64-1-1, Verified ORF, "Putative FAD transporter; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance"</Hit_def>
<Hit_accession>61</Hit_accession>
<Hit_len>783</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>23.0978</Hsp_bit-score>
<Hsp_score>48</Hsp_score>
<Hsp_evalue>3.39069</Hsp_evalue>
<Hsp_query-from>250</Hsp_query-from>
<Hsp_query-to>333</Hsp_query-to>
<Hsp_hit-from>614</Hsp_hit-from>
<Hsp_hit-to>641</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>17</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>28</Hsp_align-len>
<Hsp_qseq>DMKHFPFKLIDVDGKPQIQVEFKGETKN</Hsp_qseq>
<Hsp_hseq>DVRYQPMKDDRVSFIPKIQNDFDGKNKN</Hsp_hseq>
<Hsp_midline>D+++ P K V P+IQ +F G+ KN</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>gnl|BL_ORD_ID|101</Hit_id>
<Hit_def>YAR029W YAR029W SGDID:S000000077, Chr I from 186321-186545, Genome Release 64-1-1, Uncharacterized ORF, "Member of DUP240 gene family but contains no transmembrane domains; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern"</Hit_def>
<Hit_accession>101</Hit_accession>
<Hit_len>74</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>21.557</Hsp_bit-score>
<Hsp_score>44</Hsp_score>
<Hsp_evalue>3.73908</Hsp_evalue>
<Hsp_query-from>595</Hsp_query-from>
<Hsp_query-to>696</Hsp_query-to>
<Hsp_hit-from>33</Hsp_hit-from>
<Hsp_hit-to>66</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>12</Hsp_identity>
<Hsp_positive>17</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>34</Hsp_align-len>
<Hsp_qseq>GGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDN</Hsp_qseq>
<Hsp_hseq>GRTFEKPTSNAEENVQETEAGESFTLNPGEDFQN</Hsp_hseq>
<Hsp_midline>G TF+ + E+ + E +A T GEDF N</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>105</Statistics_db-num>
<Statistics_db-len>46739</Statistics_db-len>
<Statistics_hsp-len>67</Statistics_hsp-len>
<Statistics_eff-space>22944384</Statistics_eff-space>
<Statistics_kappa>0.041</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>6</Iteration_iter-num>
<Iteration_query-ID>Query_6</Iteration_query-ID>
<Iteration_query-def>YAL007C ERP2 SGDID:S000000005, Chr I from 138345-137698, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein that forms a heterotrimeric complex with Erp1p, Emp24p, and Erv25p; member, along with Emp24p and Erv25p, of the p24 family involved in ER to Golgi transport and localized to COPII-coated vesicles"</Iteration_query-def>
<Iteration_query-len>648</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gnl|BL_ORD_ID|5</Hit_id>
<Hit_def>YAL007C ERP2 SGDID:S000000005, Chr I from 138345-137698, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein that forms a heterotrimeric complex with Erp1p, Emp24p, and Erv25p; member, along with Emp24p and Erv25p, of the p24 family involved in ER to Golgi transport and localized to COPII-coated vesicles"</Hit_def>
<Hit_accession>5</Hit_accession>
<Hit_len>215</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>310.457</Hsp_bit-score>
<Hsp_score>794</Hsp_score>
<Hsp_evalue>2.94478e-109</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>645</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>215</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>215</Hsp_identity>
<Hsp_positive>215</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>215</Hsp_align-len>
<Hsp_qseq>MIKSTIALPSFFXXXXXXXXXXXXXXXXXXXXXXXLPAFSKECLYYDMVTEDDSLAVGYQVLTGGNFEIDFDITAPDGSVITSEKQKKYSDFLLKSFGVGKYTFCFSNNYGTALKKVEITLEKEKTLTDEHEXXXXXXXXXXXXXXEEIDRNLNKITKTLNYLRAREWRNMSTVNSTESRLTWXXXXXXXXXXXXXXXXXXXXQFLFTGRQKNYV</Hsp_qseq>
<Hsp_hseq>MIKSTIALPSFFIVLILALVNSVAASSSYAPVAISLPAFSKECLYYDMVTEDDSLAVGYQVLTGGNFEIDFDITAPDGSVITSEKQKKYSDFLLKSFGVGKYTFCFSNNYGTALKKVEITLEKEKTLTDEHEADVNNDDIIANNAVEEIDRNLNKITKTLNYLRAREWRNMSTVNSTESRLTWLSILIIIIIAVISIAQVLLIQFLFTGRQKNYV</Hsp_hseq>
<Hsp_midline>MIKSTIALPSFFIVLILALVNSVAASSSYAPVAISLPAFSKECLYYDMVTEDDSLAVGYQVLTGGNFEIDFDITAPDGSVITSEKQKKYSDFLLKSFGVGKYTFCFSNNYGTALKKVEITLEKEKTLTDEHEADVNNDDIIANNAVEEIDRNLNKITKTLNYLRAREWRNMSTVNSTESRLTWLSILIIIIIAVISIAQVLLIQFLFTGRQKNYV</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gnl|BL_ORD_ID|17</Hit_id>
<Hit_def>YAL017W PSK1 SGDID:S000000015, Chr I from 120225-124295, Genome Release 64-1-1, Verified ORF, "One of two (see also PSK2) PAS domain containing S/T protein kinases; coordinately regulates protein synthesis and carbohydrate metabolism and storage in response to a unknown metabolite that reflects nutritional status"</Hit_def>
<Hit_accession>17</Hit_accession>
<Hit_len>1356</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.2534</Hsp_bit-score>
<Hsp_score>51</Hsp_score>
<Hsp_evalue>0.392042</Hsp_evalue>
<Hsp_query-from>193</Hsp_query-from>
<Hsp_query-to>387</Hsp_query-to>
<Hsp_hit-from>1069</Hsp_hit-from>
<Hsp_hit-to>1135</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>20</Hsp_identity>
<Hsp_positive>32</Hsp_positive>
<Hsp_gaps>10</Hsp_gaps>
<Hsp_align-len>71</Hsp_align-len>
<Hsp_qseq>GNFEIDFDITAPDGSVITSEKQKKYSDFL-LKSFGVGKY---TFCFS--NNYGTALKKVEITLEKEKTLTD</Hsp_qseq>
<Hsp_hseq>GNQPVSTFLRTPEKNIGAQKHVKKFSDFVSLQKMGEGAYGKVNLCIHKKNRYIVVIKMI----FKERILVD</Hsp_hseq>
<Hsp_midline>GN + + P+ ++ + KK+SDF+ L+ G G Y C N Y +K + KE+ L D</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>3</Hit_num>
<Hit_id>gnl|BL_ORD_ID|7</Hit_id>
<Hit_def>YAL009W SPO7 SGDID:S000000007, Chr I from 135854-136633, Genome Release 64-1-1, Verified ORF, "Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology, premeiotic replication, and sporulation"</Hit_def>
<Hit_accession>7</Hit_accession>
<Hit_len>259</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>21.557</Hsp_bit-score>
<Hsp_score>44</Hsp_score>
<Hsp_evalue>2.27678</Hsp_evalue>
<Hsp_query-from>262</Hsp_query-from>
<Hsp_query-to>351</Hsp_query-to>
<Hsp_hit-from>74</Hsp_hit-from>
<Hsp_hit-to>106</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>11</Hsp_identity>
<Hsp_positive>19</Hsp_positive>
<Hsp_gaps>3</Hsp_gaps>
<Hsp_align-len>33</Hsp_align-len>
<Hsp_qseq>KYSDFLLKSFGVGKYTF---CFSNNYGTALKKV</Hsp_qseq>
<Hsp_hseq>QFTLFLASMAGVGAFTFYELYFTSDYVKGLHRV</Hsp_hseq>
<Hsp_midline>+++ FL GVG +TF F+++Y L +V</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>105</Statistics_db-num>
<Statistics_db-len>46739</Statistics_db-len>
<Statistics_hsp-len>58</Statistics_hsp-len>
<Statistics_eff-space>6443082</Statistics_eff-space>
<Statistics_kappa>0.041</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>7</Iteration_iter-num>
<Iteration_query-ID>Query_7</Iteration_query-ID>
<Iteration_query-def>YAL008W FUN14 SGDID:S000000006, Chr I from 136914-137510, Genome Release 64-1-1, Verified ORF, "Mitochondrial protein of unknown function"</Iteration_query-def>
<Iteration_query-len>597</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gnl|BL_ORD_ID|6</Hit_id>
<Hit_def>YAL008W FUN14 SGDID:S000000006, Chr I from 136914-137510, Genome Release 64-1-1, Verified ORF, "Mitochondrial protein of unknown function"</Hit_def>
<Hit_accession>6</Hit_accession>
<Hit_len>198</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>327.791</Hsp_bit-score>
<Hsp_score>839</Hsp_score>
<Hsp_evalue>1.29722e-116</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>594</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>198</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>198</Hsp_identity>
<Hsp_positive>198</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>198</Hsp_align-len>
<Hsp_qseq>MTLAFNMQRLVFRNLNVGKRMFKNVPLWRFNVANKLGKPLTRSXXXXXXXXXXXXFYLMNRQPSKLIFNDSLGAAVKQQGPLEPTVGNSTAITEERRNKISSHKQMFLGSLFGVVLGVTVAKISILFMYVGITSMLLCEWLRYKGWIRINLKNIKSXXXXXXXXXXXXXXXXXXXTEYMGFKVFFTLSFVLASLNANK</Hsp_qseq>
<Hsp_hseq>MTLAFNMQRLVFRNLNVGKRMFKNVPLWRFNVANKLGKPLTRSVGLGGAGIVAGGFYLMNRQPSKLIFNDSLGAAVKQQGPLEPTVGNSTAITEERRNKISSHKQMFLGSLFGVVLGVTVAKISILFMYVGITSMLLCEWLRYKGWIRINLKNIKSVIVLKDVDLKKLLIDGLLGTEYMGFKVFFTLSFVLASLNANK</Hsp_hseq>
<Hsp_midline>MTLAFNMQRLVFRNLNVGKRMFKNVPLWRFNVANKLGKPLTRSVGLGGAGIVAGGFYLMNRQPSKLIFNDSLGAAVKQQGPLEPTVGNSTAITEERRNKISSHKQMFLGSLFGVVLGVTVAKISILFMYVGITSMLLCEWLRYKGWIRINLKNIKSVIVLKDVDLKKLLIDGLLGTEYMGFKVFFTLSFVLASLNANK</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gnl|BL_ORD_ID|25</Hit_id>
<Hit_def>YAL024C LTE1 SGDID:S000000022, Chr I from 105872-101565, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein similar to GDP/GTP exchange factors but without detectable GEF activity; required for asymmetric localization of Bfa1p at daughter-directed spindle pole bodies and for mitotic exit at low temperatures"</Hit_def>
<Hit_accession>25</Hit_accession>
<Hit_len>1435</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>24.2534</Hsp_bit-score>
<Hsp_score>51</Hsp_score>
<Hsp_evalue>0.304545</Hsp_evalue>
<Hsp_query-from>181</Hsp_query-from>
<Hsp_query-to>330</Hsp_query-to>
<Hsp_hit-from>246</Hsp_hit-from>
<Hsp_hit-to>296</Hsp_hit-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>0</Hsp_hit-frame>
<Hsp_identity>16</Hsp_identity>
<Hsp_positive>25</Hsp_positive>
<Hsp_gaps>1</Hsp_gaps>
<Hsp_align-len>51</Hsp_align-len>
<Hsp_qseq>RQPSKLIFNDSLGAAV-KQQGPLEPTVGNSTAITEERRNKISSHKQMFLGS</Hsp_qseq>
<Hsp_hseq>RSPSMLLFPDNTSNVYSKHRIAKEPSVDNESEDMSDSKQKISHLSKVTLVS</Hsp_hseq>
<Hsp_midline>R PS L+F D+ K + EP+V N + + + KIS ++ L S</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
</Iteration_hits>
<Iteration_stat>
<Statistics>
<Statistics_db-num>105</Statistics_db-num>
<Statistics_db-len>46739</Statistics_db-len>
<Statistics_hsp-len>58</Statistics_hsp-len>
<Statistics_eff-space>5749839</Statistics_eff-space>
<Statistics_kappa>0.041</Statistics_kappa>
<Statistics_lambda>0.267</Statistics_lambda>
<Statistics_entropy>0.14</Statistics_entropy>
</Statistics>
</Iteration_stat>
</Iteration>
<Iteration>
<Iteration_iter-num>8</Iteration_iter-num>
<Iteration_query-ID>Query_8</Iteration_query-ID>
<Iteration_query-def>YAL009W SPO7 SGDID:S000000007, Chr I from 135854-136633, Genome Release 64-1-1, Verified ORF, "Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology, premeiotic replication, and sporulation"</Iteration_query-def>
<Iteration_query-len>780</Iteration_query-len>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gnl|BL_ORD_ID|7</Hit_id>
<Hit_def>YAL009W SPO7 SGDID:S000000007, Chr I from 135854-136633, Genome Release 64-1-1, Verified ORF, "Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology, premeiotic replication, and sporulation"</Hit_def>
<Hit_accession>7</Hit_accession>
<Hit_len>259</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>513.842</Hsp_bit-score>