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Error: package 'BayesFactor' required by 'yarrr' could not be found #49

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larsheemskerk opened this issue Oct 30, 2018 · 5 comments
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@larsheemskerk
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Hello, I want to run the Yarrr package in Rstudio but I keep on receiving the following error message:

Error: package 'BayesFactor' required by 'yarrr' could not be found In addition: Warning message: package 'yarrr' was built under R version 3.5.0

I installed the BayesFactor package serveral times via package archive and the CRAN repository without succes. Could someone advice how to proceed?

@ndphillips
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Darn, 99.999% of the time installing BayesFactor directly does the trick. Are you able to load BayesFactor after installing it? Did you restart RStudio?

If you're still having issues, can you send me a screenshot of the exact errors you get when installing / loading yarrr?

@DylanMG
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DylanMG commented Mar 15, 2019

I am having this issue too:
image

Session info for reference:
image

I just want to play with the diamonds lm()'s! Thanks for all your hard work.

@ndphillips
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Easy fix: install BayesFactor manually with install.packages('BayesFactor'), then reinstall yarrr. That should fix it!

I've seen this issue often on PCs not sure why it occurs though...

@dhimrich
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I am having what appears to be a similar issue today. The last part of the messages from the compile process:

/usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__m128i’} [-Wignored-attributes]
cc1plus: some warnings being treated as errors
make: *** [/usr/lib/R/etc/Makeconf:204: RcppCallback.o] Error 1
ERROR: compilation failed for package ‘BayesFactor’
* removing ‘/home/david/R/x86_64-pc-linux-gnu-library/4.4/BayesFactor’
Warning in install.packages :
  installation of package ‘BayesFactor’ had non-zero exit status

I confirmed that my rcppeigen package is up to date, and I have also tried "install.packages("BayesFactor")" from the console.

My session info:

R version 4.4.1 (2024-06-14)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 22.04.4 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.10.0 
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.10.0

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8    LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

time zone: America/Chicago
tzcode source: system (glibc)

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
 [1] compiler_4.4.1    fastmap_1.2.0     cli_3.6.3         tools_4.4.1       htmltools_0.5.8.1 rstudioapi_0.16.0
 [7] rmarkdown_2.28    knitr_1.48        xfun_0.47         digest_0.6.29     rlang_1.1.4       evaluate_0.16   

@dhimrich
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I found that using pak::pak("yarrr") did successfully install yarr and all the dependencies. It took about 47 minutes with my setup. I don't know why it's successful and the base R function was not.

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