From c1d2e170da745bb92f7dedc6f1ad903e920275a6 Mon Sep 17 00:00:00 2001 From: Richard Neher Date: Sun, 9 Feb 2020 03:35:20 +0100 Subject: [PATCH] version bump --- changelog.md | 8 ++++++++ treetime/__init__.py | 2 +- 2 files changed, 9 insertions(+), 1 deletion(-) diff --git a/changelog.md b/changelog.md index 20a00372..61bdfe21 100644 --- a/changelog.md +++ b/changelog.md @@ -1,3 +1,11 @@ +# 0.7.2 -- weights in discrete trait reconstruction +This release implements a more consistent handling of weights (fixed equilibrium frequencies) in discrete state reconstruction. +It also fixes a number of problems in who the arguments were processed. +TreeTime now allows + * unobserved discrete states + * uses expected time-in-tree instead of observed time-in-tree in GTR estimation when weights are fixed. The former resulted in very unstable rate estimates. + + # 0.7.0 -- restructuring ## Major changes diff --git a/treetime/__init__.py b/treetime/__init__.py index 9a742118..75371395 100644 --- a/treetime/__init__.py +++ b/treetime/__init__.py @@ -1,5 +1,5 @@ from __future__ import print_function, division, absolute_import -version="0.7.1" +version="0.7.2" class TreeTimeError(Exception): """TreeTimeError class"""