From bddb8b837dbf3b507bde408fda3e81c9c9c4ddc7 Mon Sep 17 00:00:00 2001 From: alessandrofelder Date: Fri, 24 Oct 2025 17:47:13 +0100 Subject: [PATCH 1/2] small formatting tweaks these fix the ERRORs, but not the WARNINGs for me locally --- docs/source/index.md | 2 +- docs/source/user_guide/key_concepts.md | 4 +--- 2 files changed, 2 insertions(+), 4 deletions(-) diff --git a/docs/source/index.md b/docs/source/index.md index cff54a3..b8ffd95 100644 --- a/docs/source/index.md +++ b/docs/source/index.md @@ -7,7 +7,7 @@ A Python package for reconstructing movies of rotating samples acquired with a l On the left, the mean image of a 3-photon movie in which the head of the animal was rotating. In the center, the mean image after derotation, and on the left the mean image of the derotated movie after suite2p registration. As you can see, already after derotation the cells are visible and have well defined shapes. ``` -::::{grid} 1 2 2 +::::{grid} 1 2 2 2 :gutter: 2 :::{grid-item-card} 📘 User guide diff --git a/docs/source/user_guide/key_concepts.md b/docs/source/user_guide/key_concepts.md index 00e4cfb..07d2c69 100644 --- a/docs/source/user_guide/key_concepts.md +++ b/docs/source/user_guide/key_concepts.md @@ -78,7 +78,7 @@ The following inputs are required: - A **CSV file** describing speeds and directions of rotation in the following format: - ```csv + ```text speed,direction 200,-1 200,1 @@ -171,5 +171,3 @@ You can find different examples on how to use the Rotator and SyntheticData clas - [Use the Rotator to create elliptically rotated data](../examples/elliptical_rotations.rst) - [Find center of rotation with synthetic data](../examples/find_center_of_rotation.rst) - [Simple rotation and derotation of an image stack](../examples/rotate_and_derotate_a_square.rst) - ---- From e0de78508d01f44369bced87cda138fa70696a68 Mon Sep 17 00:00:00 2001 From: lauraporta Date: Tue, 28 Oct 2025 14:11:10 +0000 Subject: [PATCH 2/2] Add a bit more spacing --- docs/source/index.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/docs/source/index.md b/docs/source/index.md index b8ffd95..7a91714 100644 --- a/docs/source/index.md +++ b/docs/source/index.md @@ -7,8 +7,8 @@ A Python package for reconstructing movies of rotating samples acquired with a l On the left, the mean image of a 3-photon movie in which the head of the animal was rotating. In the center, the mean image after derotation, and on the left the mean image of the derotated movie after suite2p registration. As you can see, already after derotation the cells are visible and have well defined shapes. ``` -::::{grid} 1 2 2 2 -:gutter: 2 +::::{grid} 2 +:gutter: 4 :::{grid-item-card} 📘 User guide :link: user_guide/index