diff --git a/docs/cli.rst b/docs/cli.rst index 5093bacdd0..3124e7fb49 100644 --- a/docs/cli.rst +++ b/docs/cli.rst @@ -1265,6 +1265,12 @@ facilitates rapid iterations, inspections of any pipeline as well as debugging. $ nextflow run nextflow-io/hello -with-tower +- Invoke the nextflow pipeline execution with a custom parameters ``YAML/JSON`` file. +The parameters which are specified through this mechanism are merged with the resolved configuration (base configuration and profiles) and only the common fields are overwritten by the ``YAML/JSON`` file.:: + + $ nextflow run main.nf -params-file pipeline_params.yml + + -------------------- self-update -------------------- @@ -1284,7 +1290,7 @@ Update the nextflow runtime to the latest available version. **Description** -The ``self-update`` command directs the ``nextflow`` cli to update itself to the latest stable release. +The ``self-update`` command directs the ``nextflow`` cli to update itself to the latest stable release. **Examples**