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Add support for RNAse-R effect correction #105

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3 tasks
nictru opened this issue Mar 18, 2024 · 0 comments
Open
3 tasks

Add support for RNAse-R effect correction #105

nictru opened this issue Mar 18, 2024 · 0 comments
Labels
feature-request Request for a new pipeline feature first-timers-only Good for newcomers
Milestone
Before release pr...

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@nictru
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nictru commented Mar 18, 2024

Description of feature

This should be an optional column in the samplesheet. If available, it should be used in detection tools like CIRI.

The following things need to be done:

  • Add definition to the input schema
  • Update samplesheet processing here and here
  • Pass data through the necessary channels to the detection tools and utilize if available
@nictru nictru added the enhancement Improvement for existing functionality label Mar 18, 2024
@nictru nictru added feature-request Request for a new pipeline feature first-timers-only Good for newcomers and removed enhancement Improvement for existing functionality labels Jun 9, 2024
@nictru nictru added this to the Before release process milestone Jun 9, 2024
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feature-request Request for a new pipeline feature first-timers-only Good for newcomers
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Before release process
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