From 3fdd6f536c2f3b4e86e56cceceaf3c3c72fd8be4 Mon Sep 17 00:00:00 2001 From: maxulysse Date: Wed, 23 Aug 2023 14:58:23 +0200 Subject: [PATCH 1/2] update schema_ignore_params to validationSchemaIgnoreParams --- conf/test.config | 2 +- conf/test_full.config | 3 ++- 2 files changed, 3 insertions(+), 2 deletions(-) diff --git a/conf/test.config b/conf/test.config index 322dd7ae..961ab069 100644 --- a/conf/test.config +++ b/conf/test.config @@ -29,7 +29,7 @@ params { protocol = '10XV2' // Ignore `--input` as otherwise the parameter validation will throw an error - schema_ignore_params = 'genomes,input_paths,input' + validationSchemaIgnoreParams = 'genomes' } process { diff --git a/conf/test_full.config b/conf/test_full.config index 13c716d8..dd838978 100644 --- a/conf/test_full.config +++ b/conf/test_full.config @@ -21,5 +21,6 @@ params { genome = 'GRCh38' aligner = 'star' protocol = '10XV2' - schema_ignore_params = 'genomes' + + validationSchemaIgnoreParams = 'genomes' } From 18b26f2b80c3c863616c1a7865609e7a6dfa3ee5 Mon Sep 17 00:00:00 2001 From: Maxime U Garcia Date: Wed, 23 Aug 2023 16:29:05 +0200 Subject: [PATCH 2/2] Update conf/test.config --- conf/test.config | 1 - 1 file changed, 1 deletion(-) diff --git a/conf/test.config b/conf/test.config index 961ab069..45ee54c8 100644 --- a/conf/test.config +++ b/conf/test.config @@ -28,7 +28,6 @@ params { aligner = 'star' protocol = '10XV2' - // Ignore `--input` as otherwise the parameter validation will throw an error validationSchemaIgnoreParams = 'genomes' }