-
-
Notifications
You must be signed in to change notification settings - Fork 14
73 lines (63 loc) · 2.22 KB
/
R-CMD-check.yaml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macOS-latest, r: 'release', rtools: ''}
- {os: windows-latest, r: 'release', rtools: '42'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release', rtools: ''}
- {os: ubuntu-latest, r: 'release', rtools: ''}
- {os: ubuntu-latest, r: 'oldrel-1', rtools: ''}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v2
- uses: n1hility/cancel-previous-runs@v2
with:
token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2.2.6
with:
r-version: ${{ matrix.config.r }}
rtools-version: ${{ matrix.config.rtools }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
# As cmdstanr is not yet on CRAN, configure the action to only install the
# 'Depends' packages by default and then manually specify the 'Suggests'
# packages that are needed for R CMD CHECK
- uses: r-lib/actions/setup-r-dependencies@v2
with:
dependencies: NA
extra-packages: |
knitr
collapse
rmarkdown
ggplot2
rjags
coda
runjags
stan-dev/cmdstanr
testthat
usethis
rcmdcheck
- name: Build Cmdstan
run: |
cmdstanr::check_cmdstan_toolchain(fix = TRUE)
cmdstanr::install_cmdstan()
shell: Rscript {0}
- uses: r-lib/actions/check-r-package@v2
with:
build_args: 'c("--no-manual", "--no-build-vignettes")'
args: 'c("--no-manual", "--as-cran", "--ignore-vignettes")'