diff --git a/src/ontology/Makefile b/src/ontology/Makefile index 6b35b9b..d55bb95 100644 --- a/src/ontology/Makefile +++ b/src/ontology/Makefile @@ -1,7 +1,7 @@ # ---------------------------------------- # Makefile for wbls # Generated using ontology-development-kit -# ODK Version: v1.4.2 +# ODK Version: v1.4.3 # ---------------------------------------- # IMPORTANT: DO NOT EDIT THIS FILE. To override default make goals, use wbls.Makefile instead @@ -43,7 +43,7 @@ REPORT_PROFILE_OPTS = OBO_FORMAT_OPTIONS = SPARQL_VALIDATION_CHECKS = owldef-self-reference iri-range label-with-iri multiple-replaced_by SPARQL_EXPORTS = basic-report class-count-by-prefix edges xrefs obsoletes synonyms -ODK_VERSION_MAKEFILE = v1.4.2 +ODK_VERSION_MAKEFILE = v1.4.3 TODAY ?= $(shell date +%Y-%m-%d) OBODATE ?= $(shell date +'%d:%m:%Y %H:%M') diff --git a/src/ontology/imports/ro_import.owl b/src/ontology/imports/ro_import.owl index 3e5c1d4..3799187 100644 --- a/src/ontology/imports/ro_import.owl +++ b/src/ontology/imports/ro_import.owl @@ -7,9 +7,9 @@ Prefix(rdfs:=) Ontology( - + Annotation( ) -Annotation(owl:versionInfo "2023-09-26") +Annotation(owl:versionInfo "2024-01-16") Declaration(Class()) Declaration(Class()) diff --git a/wbls-base.json b/wbls-base.json index f409cde..76b5f78 100644 --- a/wbls-base.json +++ b/wbls-base.json @@ -40,9 +40,9 @@ "val" : "Version: 1.04" }, { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-09-26" + "val" : "2024-01-16" } ], - "version" : "http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls-base.json" + "version" : "http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls-base.json" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/BFO_0000050", diff --git a/wbls-base.obo b/wbls-base.obo index 28a4e37..8944e07 100644 --- a/wbls-base.obo +++ b/wbls-base.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: wbls/releases/2023-09-26/wbls-base.owl +data-version: wbls/releases/2024-01-16/wbls-base.owl date: 15:11:2017 12:24 saved-by: chris-grove auto-generated-by: OBO-Edit 2.2-rc1 @@ -12,7 +12,7 @@ property_value: http://purl.org/dc/elements/1.1/title "C. elegans Development On property_value: http://purl.org/dc/elements/1.1/type IAO:8000001 property_value: http://purl.org/dc/terms/license "http://creativecommons.org/licenses/by/4.0/" xsd:string property_value: IAO:0000700 WBls:0000075 -property_value: owl:versionInfo "2023-09-26" xsd:string +property_value: owl:versionInfo "2024-01-16" xsd:string [Term] id: WBls:0000001 diff --git a/wbls-base.owl b/wbls-base.owl index 3e5a6c6..f06a827 100644 --- a/wbls-base.owl +++ b/wbls-base.owl @@ -12,7 +12,7 @@ xmlns:dcterms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + Ontology about the development and life stages of the C. elegans C. elegans Development Ontology @@ -25,7 +25,7 @@ chris-grove Editors: Wen J. Chen & Daniela Raciti, Raymond Lee, Chris Grove, WormBase, Caltech. Jane Lomax, Wellcome Trust Sanger Institute. Version: 1.04 - 2023-09-26 + 2024-01-16 @@ -25467,5 +25467,5 @@ - + diff --git a/wbls-full.json b/wbls-full.json index 371ad86..25f6826 100644 --- a/wbls-full.json +++ b/wbls-full.json @@ -37,9 +37,9 @@ "val" : "Version: 1.04" }, { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-09-26" + "val" : "2024-01-16" } ], - "version" : "http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls-full.json" + "version" : "http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls-full.json" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/IAO_0000125", diff --git a/wbls-full.obo b/wbls-full.obo index a82eb1d..0ba5d7c 100644 --- a/wbls-full.obo +++ b/wbls-full.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: wbls/releases/2023-09-26/wbls-full.owl +data-version: wbls/releases/2024-01-16/wbls-full.owl date: 15:11:2017 12:24 saved-by: chris-grove auto-generated-by: OBO-Edit 2.2-rc1 @@ -19,7 +19,7 @@ property_value: http://purl.org/dc/elements/1.1/description "Ontology about the property_value: http://purl.org/dc/elements/1.1/title "C. elegans Development Ontology" xsd:string property_value: http://purl.org/dc/terms/license "http://creativecommons.org/licenses/by/4.0/" xsd:string property_value: IAO:0000700 WBls:0000075 -property_value: owl:versionInfo "2023-09-26" xsd:string +property_value: owl:versionInfo "2024-01-16" xsd:string [Term] id: BFO:0000002 @@ -9874,7 +9874,7 @@ subset: http://purl.obolibrary.org/obo/valid_for_gocam subset: ro-eco property_value: IAO:0000114 IAO:0000125 property_value: RO:0001900 RO:0001901 -holds_over_chain: BFO:0000051 part_of {http://purl.obolibrary.org/obo/RO_0002582="true"} +holds_over_chain: BFO:0000051 part_of {RO:0002582="true"} holds_over_chain: BFO:0000051 RO:0002131 holds_over_chain: part_of part_of is_symmetric: true @@ -10002,7 +10002,7 @@ def: "c stands in this relationship to p if and only if there exists some p' suc property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "has function in" xsd:string property_value: seeAlso http://purl.obolibrary.org/obo/ro/docs/reflexivity/ -holds_over_chain: RO:0002215 part_of {http://purl.obolibrary.org/obo/RO_0002582="true"} +holds_over_chain: RO:0002215 part_of {RO:0002582="true"} is_a: RO:0002328 ! functionally related to is_a: RO:0002500 ! causal agent in process @@ -10137,7 +10137,7 @@ property_value: IAO:0000118 "inheres in part of" xsd:string property_value: IAO:0000119 http://www.ncbi.nlm.nih.gov/pubmed/20064205 property_value: RO:0001900 RO:0001901 property_value: seeAlso http://purl.obolibrary.org/obo/ro/docs/reflexivity/ -holds_over_chain: RO:0000052 part_of {http://purl.obolibrary.org/obo/RO_0002582="true"} +holds_over_chain: RO:0000052 part_of {RO:0002582="true"} is_a: RO:0002502 ! depends on transitive_over: part_of ! part_of @@ -10188,7 +10188,7 @@ name: part of structure that is capable of def: "this relation holds between c and p when c is part of some c', and c' is capable of p." [] property_value: IAO:0000117 https://orcid.org/0000-0002-6601-2165 property_value: IAO:0000118 "false" xsd:boolean -holds_over_chain: part_of RO:0002215 {http://purl.obolibrary.org/obo/RO_0002581="true"} +holds_over_chain: part_of RO:0002215 {RO:0002581="true"} is_a: RO:0002328 ! functionally related to [Typedef] diff --git a/wbls-full.owl b/wbls-full.owl index d6925cd..c0c3076 100644 --- a/wbls-full.owl +++ b/wbls-full.owl @@ -19,7 +19,7 @@ xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + Ontology about the development and life stages of the C. elegans C. elegans Development Ontology @@ -31,7 +31,7 @@ chris-grove Editors: Wen J. Chen & Daniela Raciti, Raymond Lee, Chris Grove, WormBase, Caltech. Jane Lomax, Wellcome Trust Sanger Institute. Version: 1.04 - 2023-09-26 + 2024-01-16 @@ -30904,5 +30904,5 @@ e.g. if GP X enables ATPase coupled transporter activity' and 'ATPase - + diff --git a/wbls-simple.json b/wbls-simple.json index 723b127..923efa3 100644 --- a/wbls-simple.json +++ b/wbls-simple.json @@ -37,9 +37,9 @@ "val" : "Version: 1.04" }, { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-09-26" + "val" : "2024-01-16" } ], - "version" : "http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls-simple.json" + "version" : "http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls-simple.json" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/BFO_0000050", diff --git a/wbls-simple.obo b/wbls-simple.obo index d6ad027..642a0b4 100644 --- a/wbls-simple.obo +++ b/wbls-simple.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: wbls/releases/2023-09-26/wbls-simple.owl +data-version: wbls/releases/2024-01-16/wbls-simple.owl date: 15:11:2017 12:24 saved-by: chris-grove auto-generated-by: OBO-Edit 2.2-rc1 diff --git a/wbls-simple.owl b/wbls-simple.owl index d127415..3b67b7d 100644 --- a/wbls-simple.owl +++ b/wbls-simple.owl @@ -11,7 +11,7 @@ xmlns:terms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + Ontology about the development and life stages of the C. elegans C. elegans Development Ontology @@ -25853,5 +25853,5 @@ A continuant cannot be part of an occurrent: use 'participates in'. An - + diff --git a/wbls.json b/wbls.json index bf66dea..a06d823 100644 --- a/wbls.json +++ b/wbls.json @@ -37,9 +37,9 @@ "val" : "Version: 1.04" }, { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2023-09-26" + "val" : "2024-01-16" } ], - "version" : "http://purl.obolibrary.org/obo/wbls/releases/2023-09-26/wbls.json" + "version" : "http://purl.obolibrary.org/obo/wbls/releases/2024-01-16/wbls.json" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/IAO_0000125", diff --git a/wbls.obo b/wbls.obo index d6ad027..642a0b4 100644 --- a/wbls.obo +++ b/wbls.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: wbls/releases/2023-09-26/wbls-simple.owl +data-version: wbls/releases/2024-01-16/wbls-simple.owl date: 15:11:2017 12:24 saved-by: chris-grove auto-generated-by: OBO-Edit 2.2-rc1 diff --git a/wbls.owl b/wbls.owl index ddc065e..3a35928 100644 --- a/wbls.owl +++ b/wbls.owl @@ -19,7 +19,7 @@ xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + Ontology about the development and life stages of the C. elegans C. elegans Development Ontology @@ -31,7 +31,7 @@ chris-grove Editors: Wen J. Chen & Daniela Raciti, Raymond Lee, Chris Grove, WormBase, Caltech. Jane Lomax, Wellcome Trust Sanger Institute. Version: 1.04 - 2023-09-26 + 2024-01-16 @@ -30904,5 +30904,5 @@ e.g. if GP X enables ATPase coupled transporter activity' and 'ATPase - +