nf-core/fetchngs: Changelog

The format is based on Keep a Changelog and this project adheres to Semantic Versioning.

[1.1] - 2021-06-22

[#12] - Error when using singularity - /etc/resolv.conf doesn't exist in container
Added --sample_mapping_fields parameter to create a separate id_mappings.csv and multiqc_config.yml with selected fields that can be used to rename samples in general and in MultiQC

Initial release of nf-core/fetchngs, created with the nf-core template.

Via a single file of ids, provided one-per-line the pipeline performs the following steps:

Resolve database ids back to appropriate experiment-level ids and to be compatible with the ENA API
Fetch extensive id metadata including direct download links to FastQ files via ENA API
Download FastQ files in parallel via curl and perform md5sum check
Collate id metadata and paths to FastQ files in a single samplesheet

Currently, the following types of example identifiers are supported: