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data.txt
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data.txt
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mockClinical.push({ Tumor_Sample_Barcode: "SampleA-1",
Biopsy_Time: "1",
Treatment: "TreatmentA"})
mockClinical.push({ Tumor_Sample_Barcode: "SampleA-2",
Biopsy_Time: "2",
Treatment: "TreatmentB"})
var mutationA_1 = {
Hugo_Symbol: "TP53",
Entrez_Gene_Id: "7157",
NCBI_Build: "GRCh38.p2",
Chromosome: "chr17",
Start_Position: "100",
End_Position: "101",
Strand: "+",
Reference_Allele: "A",
Tumor_Seq_Allele1: "T",
Tumor_Sample_Barcode: "SampleA-1",
Score: "0.1"
};
// Copy the same mutation but gives a different barcode and score
var mutationA_2 = angular.copy(mutationA_1);
mutationA_2.Tumor_Sample_Barcode = "SampleA-2";
mutationA_2.Score = "0.2";
// New mutation, same sample as SampleA-1.
var mutationB_1 = {
Hugo_Symbol: "AKT1",
Entrez_Gene_Id: "7121",
NCBI_Build: "GRCh38.p2",
Chromosome: "chr11",
Start_Position: "700",
End_Position: "701",
Strand: "+",
Reference_Allele: "A",
Tumor_Seq_Allele1: "T",
Tumor_Sample_Barcode: "SampleA-1",
Score: "0.4"
};
// mutationB_2, same mutation as B but different time sample
var mutationB_2 = angular.copy(mutationB_1);
mutationB_2.Tumor_Sample_Barcode = "SampleA-2";
mutationB_2.Score = "0.6";