-
Notifications
You must be signed in to change notification settings - Fork 2
Expand file tree
/
Copy pathusing_github.html
More file actions
230 lines (209 loc) · 8.31 KB
/
using_github.html
File metadata and controls
230 lines (209 loc) · 8.31 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
<!DOCTYPE html>
<html lang="en">
<head>
<title>Using GitHub for openMetaAnalysis</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8" />
<style>
.wrapper
{
width: 860px;
margin-top: 0px;
margin-right: auto;
margin-bottom: 0px;
margin-left: auto;
}
//Menu from http://codepen.io/philhoyt/pen/ujHzd
#primary_nav_wrap
{
margin-top:15px
}
#primary_nav_wrap ul
{
list-style:none;
position:relative;
float:left;
margin:0;
padding:0
}
#primary_nav_wrap ul a
{
display:block;
background-color:#6DC6E7;
color:#FFFFFF;
text-decoration:none;
font-weight:bold;
//font-weight:700;
//font-size:12px;
line-height:32px;
padding:0 15px;
//font-family:"HelveticaNeue","Helvetica Neue",Helvetica,Arial,sans-serif
}
#primary_nav_wrap ul li
{
position:relative;
float:left;
margin:0;
padding:0
}
#primary_nav_wrap ul li.current-menu-item
{
background:#0022B4;
color:#FFFFFF;
}
#primary_nav_wrap ul a:hover
{
background:#0022B4;
color:#FFFFFF;
}
#primary_nav_wrap ul ul
{
display:none;
position:absolute;
top:100%;
left:0;
background-color:#6DC6E7;
color:#FFFFFF;
padding:0
}
#primary_nav_wrap ul ul li
{
float:none;
width:200px
}
#primary_nav_wrap ul ul a
{
line-height:120%;
padding:10px 15px;
}
#primary_nav_wrap ul ul ul
{
top:0;
left:100%
}
#primary_nav_wrap ul li:hover > ul
{
display:block
}
</style>
</head>
<body>
<!--
http://jquery-csv.googlecode.com/git/examples/basic-usage.html
http://jquery-csv.googlecode.com/git/examples/flot.html -> seems best and most stable without reticulating spines error
http://code.google.com/p/jquery-csv/wiki/API -> instructions
-->
<div class="wrapper">
<div class="page-header">
<div style="color:#0022B4">
<h1>openMetaAnalysis: <span style="font-size:50%">collaborative and continuous</span></h1>
</div>
<nav id="primary_nav_wrap">
<ul id="menu">
<li class="listitem"><a href="http://openmetaanalysis.github.io/" class="menuitem">Home</a></li>
<li class="listitem"><a href="#" class="menuitem">Editors</a>
<ul>
<li><a href="https://openmetaanalysis.ocpu.io/home/www/editor.html" class="menuitem">Intervention</a></li>
<li><a href="https://openmetaanalysis.ocpu.io/home/www/editor-dx.html" class="menuitem">Diagnosis</a></li>
<li class="listitem"><a href="https://openmetaanalysis.ocpu.io/home/www/arrows.html" class="menuitem">Arrows Plot</a></li>
</ul>
</li>
<li class="listitem"><a href="http://openmetaanalysis.github.io/methods.html" class="menuitem">Methods</a></li>
<li class="listitem"><a href="http://openmetaanalysis.github.io/using_github.html" class="menuitem">Get involved</a></li>
</ul>
</nav>
</div>
<div style="clear:both"> </div>
<h1 style="color:#0022B4">Get involved</h1>
<h3>To contribute to an existing openMetaAnalysis</h3>
<div>Explore possible revisions by using the <a id="showeditor" href="https://openmetaanalysis.ocpu.io/home/www/editor.html">editor</a> and <a href="https://github.com/openMetaAnalysis/Vitamin-D-for-fracture-prevention/blob/master/data/all%20trials.csv">this example</a> or any <a href="https://github.com/openMetaAnalysis">other</a> data set. To do this:</div>
<ul>
<li>Click the '<a href="https://raw.githubusercontent.com/openMetaAnalysis/Vitamin-D-for-fracture-prevention/master/data/all%20trials.csv">raw view</a>' of the example dataset</li>
<li>Paste into the <a href="https://openmetaanalysis.ocpu.io/home/www/editor.html">editor</a></li>
<li>Remove the column labels from the top line</li>
<li>Click the link, "Click here to add commas"</li>
<li>Click the button, "Update Plot"</li>
</ul>
<div>Then, if you have a good revision:</div>
<ul>
<li>Revise the data, by copying ('<a href="https://help.github.com/articles/fork-a-repo">forking</a>') the repository to a new repository, then:
<ul>
<li>Edit or update the data files.</li>
<li>Revising images such as forest plots or GRADE Profiles requires the GitHub client for <a href="https://windows.github.com/">Windows</a> or <a href="https://mac.github.com/">Mac</a>.
<ul>
<li>The client will let you copy all of the repository to your computer.</li>
<li>Then, replace the images you downloaded with the new ones you create and synchronize to upload.</li>
</ul>
</li>
</ul>
</li>
<li>Lastly, either initiate a '<a href="https://help.github.com/articles/using-pull-requests">pull request</a>' for your revisions to be pulled back into the original repository or keep your analysis as a new, stand-alone analysis.</li>
</ul>
<h3>To create a new openMetaAnalysis</h3>
<div>Find an existing openMetaAnalysis review this is the most similar to what you want. Copy the url of the review. For example:</div>
<ul>
<li>A full review: <a href="https://github.com/openMetaAnalysis/Hypertonic-Saline-for-Bronchiolitis">https://github.com/openMetaAnalysis/Hypertonic-Saline-for-Bronchiolitis</a></li>
<li>A data-only review: <a href="https://github.com/openMetaAnalysis/TPO-agonists-for-ITP">https://github.com/openMetaAnalysis/TPO-agonists-for-ITP</a></li>
</ul>
<div>Create your GitHub account</div>
<ul>
<li>Click the tab to see your repositories tab</li>
<li>Create your public web site for viewing your reviews over the Internet while you are developing
<ul>
<li>Click the <span style="color:green;font-weight:bold">green 'New' button</span> to create a new repository called <i>your_username.github.io</i></li>
<li>Repository name is </i>your_username</i>.github.io</li>
<li>Click the <span style="color:green;font-weight:bold">green 'Import code' button</span> button to import from <i>https://github.com/openMetaAnalysis/openMetaAnalysis.github.io</i></li>
</ul>
</li>
<li>Create your new review with content from the review you selected above.
<ul>
<li>Return to your page of repositories</li>
<li>Click the <span style="color:green;font-weight:bold">green 'New' button</span> to create a new repository for your review</li>
<li>Enter review name in the box "Repository name"</li>
<li>Accept all defaults</li>
<li>Click <span style="color:green;font-weight:bold">green "Create repository button"</span</li>
<li>On the next page, click "Import code" from the bottom of the page</li>
<li>On the next page, enter the url of the review you selected above</li>
<li>Follow instructions</li>
</ul>
</li>
<li>Now browse to <i>http://your_username.github.io</i>
<ul>
<li>Click the <span style="color:green;font-weight:bold">green 'New' button</span> to create a new repository called <i>your_username.github.io</i></li>
<li>Add the name of your new review to the url, replacing any spaces in the name with dashes. For example, if you review is named "new review", then browse to <i>http://your_username.github.io/new-review</i></li>
</ul>
</li>
</ul>
<h3>To revise the methods of openMetaAnalysis</h3>
<ul>
<li>To revise the methods or display of <a href="https://github.com/openMetaAnalysis/home/">openMetaAnalysis</a> itself:
<ul>
<li>Edit any of the <a href="https://github.com/openMetaAnalysis/home/">repository files for openMetaAnalysis</a> to improve the display and method of analysis.</li>
<li>Please see <a href="https://github.com/openMetaAnalysis/openMetaAnalysis.github.io/issues">open issues</a></li>
</ul>
</li>
</ul>
<h3>To cite or re-use content</h3>
<ul><li><a href="https://github.com/openMetaAnalysis/openMetaAnalysis.github.io/blob/master/reusing.MD">Details, including citing for your own scholarly credit</a></li></ul>
<div> </div>
<script>
//For gh-pages
//Page history and edit
var pagename = location.pathname.split('/').slice(-1);
if (pagename.toString().length < 1){pagename = "index.html"}
document.write("<div style='text-align:center'><a href='https://github.com/openMetaAnalysis/openMetaAnalysis.github.io/blob/master/" + pagename + "'>Edit this page</a> - <a href='https://github.com/openMetaAnalysis/openMetaAnalysis.github.io/commits/master/" + pagename + "'>Page history</a></div>")
</script>
</div>
<script src="javascripts/scale.fix.js"></script>
<script type="text/javascript">
var gaJsHost = (("https:" == document.location.protocol) ? "https://ssl." : "http://www.");
document.write(unescape("%3Cscript src='" + gaJsHost + "google-analytics.com/ga.js' type='text/javascript'%3E%3C/script%3E"));
</script>
<script type="text/javascript">
try {
var pageTracker = _gat._getTracker("UA-56740469-1");
pageTracker._trackPageview();
} catch(err) {}
</script>
</body>
</html>