diff --git a/.Rproj.user/23EE8BC9/pcs/source-pane.pper b/.Rproj.user/23EE8BC9/pcs/source-pane.pper new file mode 100644 index 0000000..28a3c2e --- /dev/null +++ b/.Rproj.user/23EE8BC9/pcs/source-pane.pper @@ -0,0 +1,3 @@ +{ + "activeTab": 3 +} \ No newline at end of file diff --git a/.gitignore b/.gitignore index 0c5eea4..b0e960f 100644 --- a/.gitignore +++ b/.gitignore @@ -6,3 +6,8 @@ __pycache__ output/* metadata/* venv/ +.Rproj.user +*/Rhistory +.Rhistory +*/test.ipynb +notebooks_jupyter/local_report_ethnicity.ipynb \ No newline at end of file diff --git a/README.md b/README.md index d28b1cd..c12bff9 100644 --- a/README.md +++ b/README.md @@ -1,22 +1,17 @@ # ethnicity-short-data-report -This is the code and configuration for ethnicity-short-data-report. - You can run this project via [Gitpod](https://gitpod.io) in a web browser by clicking on this badge: [![Gitpod ready-to-code](https://img.shields.io/badge/Gitpod-ready--to--code-908a85?logo=gitpod)](https://gitpod.io/#https://github.com/opensafely/ethnicity-short-data-report) -* The paper is [here]() -* Raw model outputs, including charts, crosstabs, etc, are in `released_outputs/` -* If you are interested in how we defined our variables, take a look at the [study definition](analysis/study_definition.py); this is written in `python`, but non-programmers should be able to understand what is going on there -* If you are interested in how we defined our code lists, look in the [codelists folder](./codelists/). -* Developers and epidemiologists interested in the framework should review [the OpenSAFELY documentation](https://docs.opensafely.org) +[View on OpenSAFELY](https://jobs.opensafely.org/datalab/ethnicity-short-data-report/) + +Details of the purpose and any published outputs from this project can be found at the link above. -# About the OpenSAFELY framework +The contents of this repository MUST NOT be considered an accurate or valid representation of the study or its purpose. This repository may reflect an incomplete or incorrect analysis with no further ongoing work. The content has ONLY been made public to support the OpenSAFELY [open science and transparency principles](https://www.opensafely.org/about/#contributing-to-best-practice-around-open-science) and to support the sharing of re-usable code for other subsequent users. No clinical, policy or safety conclusions must be drawn from the contents of this repository. -The OpenSAFELY framework is a Trusted Research Environment (TRE) for electronic -health records research in the NHS, with a focus on public accountability and -research quality. +About the OpenSAFELY framework +The OpenSAFELY framework is a Trusted Research Environment (TRE) for electronic health records research in the NHS, with a focus on public accountability and research quality. -Read more at [OpenSAFELY.org](https://opensafely.org). +Read more at [OpenSAFELY.org](https://opensafely.org/). -# Licences -As standard, research projects have a MIT license. +Licences +As standard, research projects have a MIT license. diff --git a/analysis/.DS_Store b/analysis/.DS_Store deleted file mode 100644 index 5008ddf..0000000 Binary files a/analysis/.DS_Store and /dev/null differ diff --git a/analysis/00_trim_snomed_codelist.do b/analysis/00_trim_snomed_codelist.do deleted file mode 100644 index 2d4b80c..0000000 --- a/analysis/00_trim_snomed_codelist.do +++ /dev/null @@ -1,39 +0,0 @@ -/*============================================================================== -DO FILE NAME: 00_trim_snomed_codeslit -PROJECT: Ethnicity short data report -DATE: 20 July 2021 -AUTHOR: R Mathur -DESCRIPTION OF FILE: generate smaller csv files -DATASETS USED: opensafely-ethnicity-uk-categories.csv - -DATASETS CREATED: smaller codelist csvs -OTHER OUTPUT: logfiles, printed to folder $Logdir -USER-INSTALLED ADO: - (place .ado file(s) in analysis folder) -==============================================================================*/ - -* Open a log file -cap log close -log using ./logs/00_trim_snomed_codelist, replace t - -import delimited ./codelists/opensafely-ethnicity-uk-categories.csv, clear -save ./codelists/opensafely-ethnicity-uk-categories.dta, replace - -*gen groups of 50 codes -tostring code, replace -format code %20.0f -gen group=[_n] -replace group=group/61 -replace group=ceil(group) -tab group - - preserve - foreach i of num 1/10 { - keep if group == `i' - drop group - tostring code, replace - export delimited ./codelists/group`i'.csv, replace novarnames - restore, preserve - } - - log close diff --git a/analysis/00_trim_snomed_codelist.r b/analysis/00_trim_snomed_codelist.r new file mode 100644 index 0000000..424b714 --- /dev/null +++ b/analysis/00_trim_snomed_codelist.r @@ -0,0 +1,67 @@ +## splits the PRIMIS, CTV3 and SNOMED ethnicity codelists into 5 and 16 group categories + +library('tidyverse') +library('sf') + +# # import data +df_input <- read_csv(here::here("codelists","opensafely-ethnicity.csv")) +group_split<-df_input %>% + group_split(Grouping_6) + +ethnicities<-c('white','mixed','asian','black','other') + +for (i in 1:5){ + list<-group_split[i][[1]] %>% select(Code,Description) + write_csv(list,here::here("codelists",paste0("ethnicity_5_",ethnicities[i],".csv"))) +} + +df_input <- read_csv(here::here("codelists","opensafely-ethnicity-snomed-0removed.csv")) %>% + filter(Grouping_6!=0) +group_split<-df_input %>% + group_split(Grouping_6) + +for (i in 1:5){ + list<-group_split[i][[1]] %>% select(snomedcode,Ethnicity) %>% rename(Code = snomedcode) + write_csv(list,here::here("codelists",paste0("ethnicity_new_5_",ethnicities[i],".csv"))) +} + +df_input <- read_csv(here::here("codelists","primis-covid19-vacc-uptake-eth2001.csv")) +group_split<-df_input %>% + group_split(grouping_6_id) + +for (i in 1:5){ + list<-group_split[i][[1]] %>% select(code,term) %>% rename(Code=code) + write_csv(list,here::here("codelists",paste0("ethnicity_primis_5_",ethnicities[i],".csv"))) +} + +### group 16 +df_input <- read_csv(here::here("codelists","opensafely-ethnicity.csv")) +group_split<-df_input %>% + group_split(Grouping_16) + +ethnicities_16<-c('White_British','White_Irish','Other_White','White_and_Black_Caribbean','White_and_Black_African','White_and_Asian','Other_Mixed','Indian','Pakistani','Bangladeshi','Other_Asian','Caribbean','African','Other_Black','Chinese','Any_other_ethnic_group') + +for (i in 1:16){ + list<-group_split[i][[1]] %>% select(Code,Description) + write_csv(list,here::here("codelists",paste0("ethnicity_16_",ethnicities_16[i],".csv"))) +} + +df_input <- read_csv(here::here("codelists","opensafely-ethnicity-snomed-0removed.csv")) %>% + filter(Grouping_16!=0) + +group_split<-df_input %>% + group_split(Grouping_16) + +for (i in 1:16){ + list<-group_split[i][[1]] %>% select(snomedcode,Ethnicity) %>% rename(Code = snomedcode) + write_csv(list,here::here("codelists",paste0("ethnicity_new_16_",ethnicities_16[i],".csv"))) +} + +df_input <- read_csv(here::here("codelists","primis-covid19-vacc-uptake-eth2001.csv")) +group_split<-df_input %>% + group_split(grouping_16_id) + +for (i in 1:16){ + list<-group_split[i][[1]] %>% select(code,term) %>% rename(Code=code) + write_csv(list,here::here("codelists",paste0("ethnicity_primis_16_",ethnicities_16[i],".csv"))) +} \ No newline at end of file diff --git a/analysis/01_describe_snomed_ethnicity.do b/analysis/01_describe_snomed_ethnicity.do deleted file mode 100644 index a18e4ee..0000000 --- a/analysis/01_describe_snomed_ethnicity.do +++ /dev/null @@ -1,78 +0,0 @@ -/*============================================================================== -DO FILE NAME: 00_describe_snomed_ethnicity -PROJECT: Ethnicity short data report -DATE: 20 July 2021 -AUTHOR: R Mathur -DESCRIPTION OF FILE: generate counts of each ethnicity SNOMED code in TPP -DATASETS USED: input.csv - -DATASETS CREATED: snomed_ethnicity_counts.dta -OTHER OUTPUT: logfiles, printed to folder $Logdir -USER-INSTALLED ADO: - (place .ado file(s) in analysis folder) -==============================================================================*/ -sysdir set PLUS ./analysis/adofiles -adopath + ./analysis/adofiles -sysdir - -* Open a log file -cap log close -log using ./logs/01_describe_snomed_ethnicity, replace t - -*create stata version of codelists for merging -import delimited ./codelists/opensafely-ethnicity-uk-categories.csv, clear -format code %20.0f -tostring code, gen(snomedcode) format(%20.0g) -save ./output/opensafely-ethnicity-uk-categories_formerge.dta, replace - -clear - -*import csv for each group and save as dta -import delimited using ./output/input.csv, clear -gen group=1 -save ./output/input1.dta, replace - -forvalues i=2/10 { - import delimited ./output/input_`i'.csv, clear - gen group=`i' - save ./output/input`i'.dta, replace -} - -forvalues i=1/10 { - use ./output/input`i'.dta, clear - - *collapse count of each ethnicity code - collapse (sum) eth_* (min) group - - *reshape long - gen ethnicity=1 - reshape long eth_ , i(ethnicity) j(snomedcode) - ren eth_ snomedcode_count - - format snomedcode %20.0f - tostring snomedcode, replace format(%20.0g) - - *merge with codelist for descriptors - merge 1:1 snomedcode using ./output/opensafely-ethnicity-uk-categories_formerge.dta, keep(match) - - gen include=0 - replace include=1 if _merge==3 - replace include=0 if snomedcode_count==0 - tab include - drop code - save ./output/snomed_ethnicity_count_`i'.dta, replace -} - -*append all 10 files -use ./output/snomed_ethnicity_count_1.dta -forvalues i=2/10 { - append using ./output/snomed_ethnicity_count_`i'.dta -} - -gsort -include snomedcode - -order snomedcode -tab group -tab include -export delimited using ./output/snomed_ethnicity_counts.csv, replace -log close diff --git a/analysis/codelists.py b/analysis/codelists.py index ce123eb..d62491b 100644 --- a/analysis/codelists.py +++ b/analysis/codelists.py @@ -2,68 +2,229 @@ codelist, codelist_from_csv, ) -ethnicity_codes = codelist_from_csv( - "codelists/opensafely-ethnicity-uk-categories.csv", - system="snomed", - column="code", +from itertools import product + +definitions_ctv3 = ["ethnicity_5"] +definitions_ctv3_16 = ["ethnicity_16"] + +definitions_snomed = ["ethnicity_new_5", "ethnicity_primis_5"] +definitions_snomed_16 = ["ethnicity_new_16", "ethnicity_primis_16"] + +other_vars = ["white", "mixed", "asian", "black", "other"] +other_vars_16 = [ + "Indian", + "Pakistani", + "Bangladeshi", + "Other_Asian", + "Caribbean", + "African", + "Other_Black", + "White_and_Black_Caribbean", + "White_and_Black_African", + "White_and_Asian", + "Other_Mixed", + "White_British", + "White_Irish", + "Other_White", + "Chinese", + "Any_other_ethnic_group", +] + +ethnicity_combinations_ctv3 = [ + f"{definition}_{other_var}" + for definition, other_var in product(definitions_ctv3, other_vars) +] +ethnicity_combinations_snomed = [ + f"{definition}_{other_var}" + for definition, other_var in product(definitions_snomed, other_vars) +] + +ethnicity_combinations_ctv3_16 = [ + f"{definition}_{other_var}" + for definition, other_var in product(definitions_ctv3_16, other_vars_16) +] +ethnicity_combinations_snomed_16 = [ + f"{definition}_{other_var}" + for definition, other_var in product(definitions_snomed_16, other_vars_16) +] + +ethnicity_combinations_ctv3 = ( + ethnicity_combinations_ctv3 + ethnicity_combinations_ctv3_16 +) +ethnicity_combinations_snomed = ( + ethnicity_combinations_snomed + ethnicity_combinations_snomed_16 +) + +codelists_ctv3 = { + name: codelist_from_csv( + f"codelists/{name}.csv", + system="ctv3", + column="Code", + ) + for name in ethnicity_combinations_ctv3 +} +locals().update(codelists_ctv3) + +codelists_snomed = { + name: codelist_from_csv( + f"codelists/{name}.csv", + system="snomed", + column="Code", + ) + for name in ethnicity_combinations_snomed +} +locals().update(codelists_snomed) + + +# ---------------- +# Ethnicity codes +# ---------------- + +ethnicity_codes_ctv3 = codelist_from_csv( + "codelists/opensafely-ethnicity.csv", + system="ctv3", + column="Code", + category_column="Grouping_6", ) -group1 = codelist_from_csv( - "codelists/user-rohini-mathur-ethnicity_group1.csv", + +ethnicity_codes_ctv3_16 = codelist_from_csv( + "codelists/opensafely-ethnicity.csv", + system="ctv3", + column="Code", + category_column="Grouping_16", +) + +ethnicity_codes_snomed = codelist_from_csv( + "codelists/opensafely-ethnicity-snomed-0removed.csv", system="snomed", - column="code", + column="snomedcode", + category_column="Grouping_6", ) -group2 = codelist_from_csv( - "codelists/user-rohini-mathur-ethnicity_group2.csv", +ethnicity_codes_individual_snomed = codelist_from_csv( + "codelists/opensafely-ethnicity-snomed-0removed.csv", system="snomed", - column="code", + column="snomedcode", + category_column="Ethnicity", ) -group3 = codelist_from_csv( - "codelists/user-rohini-mathur-ethnicity_group3.csv", +ethnicity_codes_snomed_16 = codelist_from_csv( + "codelists/opensafely-ethnicity-snomed-0removed.csv", system="snomed", - column="code", + column="snomedcode", + category_column="Grouping_16", ) -group4 = codelist_from_csv( - "codelists/user-rohini-mathur-ethnicity_group4.csv", +# Ethnicity codes +eth2001 = codelist_from_csv( + "codelists/primis-covid19-vacc-uptake-eth2001.csv", system="snomed", column="code", + category_column="grouping_6_id", ) -group5 = codelist_from_csv( - "codelists/user-rohini-mathur-ethnicity_group5.csv", +eth2001_16 = codelist_from_csv( + "codelists/primis-covid19-vacc-uptake-eth2001.csv", system="snomed", column="code", + category_column="grouping_16_id", ) -group6 = codelist_from_csv( - "codelists/user-rohini-mathur-ethnicity_group6.csv", +# Any other ethnicity code +non_eth2001 = codelist_from_csv( + "codelists/primis-covid19-vacc-uptake-non_eth2001.csv", system="snomed", column="code", ) -group7 = codelist_from_csv( - "codelists/user-rohini-mathur-ethnicity_group7.csv", +# Ethnicity not given - patient refused +eth_notgiptref = codelist_from_csv( + "codelists/primis-covid19-vacc-uptake-eth_notgiptref.csv", system="snomed", column="code", ) -group8 = codelist_from_csv( - "codelists/user-rohini-mathur-ethnicity_group8.csv", +# Ethnicity not stated +eth_notstated = codelist_from_csv( + "codelists/primis-covid19-vacc-uptake-eth_notstated.csv", system="snomed", column="code", ) -group9 = codelist_from_csv( - "codelists/user-rohini-mathur-ethnicity_group9.csv", +# Ethnicity no record +eth_norecord = codelist_from_csv( + "codelists/primis-covid19-vacc-uptake-eth_norecord.csv", system="snomed", column="code", ) -group10 = codelist_from_csv( - "codelists/user-rohini-mathur-ethnicity_group10.csv", +# -------------------- +# Clinical conditions +# -------------------- +# Chronic cardiac disease +chronic_cardiac_dis_codes = codelist_from_csv( + "codelists/opensafely-chronic-cardiac-disease-snomed.csv", + system="snomed", + column="id", +) +# Chronic kidney disease +chronic_kidney_dis_codes = codelist_from_csv( + "codelists/opensafely-chronic-kidney-disease-snomed.csv", + system="snomed", + column="id", +) +# Chronic liver disease +chronic_liver_dis_codes = codelist_from_csv( + "codelists/opensafely-chronic-liver-disease-snomed.csv", + system="snomed", + column="id", +) +# Chronic respiratory disease +chronic_respiratory_dis_codes = codelist_from_csv( + "codelists/opensafely-chronic-respiratory-disease-snomed.csv", + system="snomed", + column="id", +) +# Cancer (Haemotological) +cancer_haem_codes = codelist_from_csv( + "codelists/opensafely-haematological-cancer-snomed.csv", + system="snomed", + column="id", +) +# Cancer (Lung) +cancer_lung_codes = codelist_from_csv( + "codelists/opensafely-lung-cancer-snomed.csv", system="snomed", column="id" +) +# Cancer (Other) +cancer_other_codes = codelist_from_csv( + "codelists/opensafely-cancer-excluding-lung-and-haematological-snomed.csv", + system="snomed", + column="id", +) +# Dementia +dementia_codes = codelist_from_csv( + "codelists/opensafely-dementia-snomed.csv", system="snomed", column="id" +) +# Diabetes +diabetes_codes = codelist_from_csv( + "codelists/opensafely-diabetes-snomed.csv", system="snomed", column="id" +) +# Housebound +housebound_codes = codelist_from_csv( + "codelists/opensafely-housebound.csv", system="snomed", column="code" +) +# Hypertension +hypertension_codes = codelist_from_csv( + "codelists/opensafely-hypertension-snomed.csv", system="snomed", column="id" +) +# Learning disability +wider_ld_codes = codelist_from_csv( + "codelists/primis-covid19-vacc-uptake-learndis.csv", system="snomed", column="code" +) +# Severe obesity +sev_obesity_codes = codelist_from_csv( + "codelists/primis-covid19-vacc-uptake-sev_obesity.csv", system="snomed", column="code", ) diff --git a/analysis/common_variables.py b/analysis/common_variables.py deleted file mode 100644 index 919b604..0000000 --- a/analysis/common_variables.py +++ /dev/null @@ -1,111 +0,0 @@ -from cohortextractor import patients -from codelists import * - - -demographic_variables = dict( - age_group=patients.categorised_as( - { - "0-17": "age < 18", - "18-24": "age >= 18 AND age < 25", - "25-34": "age >= 25 AND age < 35", - "35-44": "age >= 35 AND age < 45", - "45-54": "age >= 45 AND age < 55", - "55-69": "age >= 55 AND age < 70", - "70-79": "age >= 70 AND age < 80", - "80+": "age >= 80", - "missing": "DEFAULT", - }, - return_expectations={ - "rate": "universal", - "category": { - "ratios": { - "0-17": 0.1, - "18-24": 0.1, - "25-34": 0.1, - "35-44": 0.1, - "45-54": 0.2, - "55-69": 0.2, - "70-79": 0.1, - "80+": 0.1, - } - }, - }, - age=patients.age_as_of("index_date"), - ), - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } - ), - region=patients.registered_practice_as_of( - "index_date", - returning="nuts1_region_name", - return_expectations={ - "rate": "universal", - "category": { - "ratios": { - "North East": 0.1, - "North West": 0.1, - "Yorkshire and The Humber": 0.1, - "East Midlands": 0.1, - "West Midlands": 0.1, - "East": 0.1, - "London": 0.2, - "South East": 0.1, - "South West": 0.1, - }, - }, - }, - ), - imd=patients.categorised_as( - { - "0": "DEFAULT", - "1": """index_of_multiple_deprivation >=1 AND index_of_multiple_deprivation < 32844*1/5""", - "2": """index_of_multiple_deprivation >= 32844*1/5 AND index_of_multiple_deprivation < 32844*2/5""", - "3": """index_of_multiple_deprivation >= 32844*2/5 AND index_of_multiple_deprivation < 32844*3/5""", - "4": """index_of_multiple_deprivation >= 32844*3/5 AND index_of_multiple_deprivation < 32844*4/5""", - "5": """index_of_multiple_deprivation >= 32844*4/5 AND index_of_multiple_deprivation < 32844""", - }, - index_of_multiple_deprivation=patients.address_as_of( - "index_date", - returning="index_of_multiple_deprivation", - round_to_nearest=100, - ), - return_expectations={ - "rate": "universal", - "category": { - "ratios": { - "0": 0.05, - "1": 0.19, - "2": 0.19, - "3": 0.19, - "4": 0.19, - "5": 0.19, - } - }, - }, - ), - previous_covid=patients.categorised_as( - { - "COVID positive": """ - (sgss_positive OR primary_care_covid) - AND NOT hospital_covid - """, - "COVID hospitalised": "hospital_covid", - "No COVID code": "DEFAULT", - }, - return_expectations={ - "incidence": 1, - "category": { - "ratios": { - "COVID positive": 0.4, - "COVID hospitalised": 0.4, - "No COVID code": 0.2, - } - }, - }, - ), -) - - diff --git a/analysis/config.py b/analysis/config.py new file mode 100644 index 0000000..27477db --- /dev/null +++ b/analysis/config.py @@ -0,0 +1 @@ +index_date = "2022-01-01" \ No newline at end of file diff --git a/analysis/create_variables.py b/analysis/create_variables.py new file mode 100644 index 0000000..99b0929 --- /dev/null +++ b/analysis/create_variables.py @@ -0,0 +1,743 @@ +from cohortextractor import patients +from codelists import * +from config import * + + +def with_these_clinical_events_date_X(name, codelist, index_date, n, return_expectations): + + def var_signature(name, codelist, on_or_after, return_expectations): + return { + name: patients.with_these_clinical_events( + codelist, + returning="date", + on_or_after=on_or_after, + date_format="YYYY-MM-DD", + find_first_match_in_period=True, + return_expectations=return_expectations + ), + } + variables = var_signature(f"{name}_1", codelist, index_date, return_expectations) + for i in range(2, n+1): + variables.update(var_signature(f"{name}_{i}", codelist, f"{name}_{i-1} + 1 day", return_expectations)) + return variables + +ethnicity_overtime_variables = dict( + + **with_these_clinical_events_date_X( + name="ethnicity_new_5_date", + codelist=ethnicity_codes_snomed, + index_date="1800-01-01", + n=5, + return_expectations={ + "date": {"earliest": "1900-01-01", "latest": "2022-01-01"}, + "rate": "uniform", + "incidence": 0.99, + }, + ), + + ethnicity_new_5_latest=patients.with_these_clinical_events( + ethnicity_codes_snomed, + returning="date", + find_last_match_in_period=True, + date_format="YYYY-MM-DD", + include_date_of_match=False, + return_expectations={ + "date": {"earliest": "1900-01-01", "latest": "2022-01-01"}, + "rate": "exponential_increase", + "incidence": 0.99, + }, + ), + + ethnicity_new_5_first=patients.with_these_clinical_events( + ethnicity_codes_snomed, + returning="date", + find_first_match_in_period=True, + date_format="YYYY-MM-DD", + include_date_of_match=False, + return_expectations={ + "date": {"earliest": "1900-01-01", "latest": "2022-01-01"}, + "rate": "uniform", + "incidence": 0.99, + }, + ), + +) + +ethnicity_16_variables = dict( + ethnicity_new_16=patients.with_these_clinical_events( + ethnicity_codes_snomed_16, + returning="category", + find_last_match_in_period=True, + include_date_of_match=False, + return_expectations={ + "category": { + "ratios": { + "1": 0.0625, + "2": 0.0625, + "3": 0.0625, + "4": 0.0625, + "5": 0.0625, + "6": 0.0625, + "7": 0.0625, + "8": 0.0625, + "9": 0.0625, + "10": 0.0625, + "11": 0.0625, + "12": 0.0625, + "13": 0.0625, + "14": 0.0625, + "15": 0.0625, + "16": 0.0625, + } + }, + "incidence": 0.75, + }, + ), + ethnicity_16=patients.with_these_clinical_events( + ethnicity_codes_ctv3_16, + returning="category", + find_last_match_in_period=True, + include_date_of_match=False, + return_expectations={ + "category": { + "ratios": { + "1": 0.0625, + "2": 0.0625, + "3": 0.0625, + "4": 0.0625, + "5": 0.0625, + "6": 0.0625, + "7": 0.0625, + "8": 0.0625, + "9": 0.0625, + "10": 0.0625, + "11": 0.0625, + "12": 0.0625, + "13": 0.0625, + "14": 0.0625, + "15": 0.0625, + "16": 0.0625, + } + }, + "incidence": 0.75, + }, + ), + + ethnicity_primis_16=patients.with_these_clinical_events( + eth2001_16, + returning="category", + find_last_match_in_period=True, + include_date_of_match=False, + return_expectations={ + "category": { + "ratios": { + "1": 0.0625, + "2": 0.0625, + "3": 0.0625, + "4": 0.0625, + "5": 0.0625, + "6": 0.0625, + "7": 0.0625, + "8": 0.0625, + "9": 0.0625, + "10": 0.0625, + "11": 0.0625, + "12": 0.0625, + "13": 0.0625, + "14": 0.0625, + "15": 0.0625, + "16": 0.0625, + } + }, + "incidence": 0.75, + }, + ), + + ethnicity_sus_16=patients.with_ethnicity_from_sus( + returning="group_16", + use_most_frequent_code=True, + return_expectations={ + "category": { + "ratios": { + "1": 0.0625, + "2": 0.0625, + "3": 0.0625, + "4": 0.0625, + "5": 0.0625, + "6": 0.0625, + "7": 0.0625, + "8": 0.0625, + "9": 0.0625, + "10": 0.0625, + "11": 0.0625, + "12": 0.0625, + "13": 0.0625, + "14": 0.0625, + "15": 0.0625, + "16": 0.0625, + } + }, + "incidence": 0.75, + }, + ), + + ethnicity_sus_16_Other_White= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='3'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + + ethnicity_sus_16_White_and_Black_Caribbean= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='4'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + + ethnicity_sus_16_White_and_Black_African= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='5'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_White_and_Asian= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='6'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_Other_Mixed= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='7'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_Indian= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='8'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_Pakistani= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='9'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_Bangladeshi= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='10'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_Other_Asian= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='11'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_Caribbean= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='12'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + + ethnicity_sus_16_African= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='13'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_Other_Black= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='14'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_Chinese= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='15'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_Any_other_ethnic_group= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='16'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + ethnicity_sus_16_White_British= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='1'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + + ethnicity_sus_16_White_Irish= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_16='2'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), +) + +ethnicity_5_variables = dict( + # ---- + # Ethnicity_CTV3 + # ---- + # Ethnicity using CTV3 codes - returns latest in period + + ethnicity_new_5_date=patients.with_these_clinical_events( + ethnicity_codes_snomed, + returning="date", + find_last_match_in_period=True, + include_date_of_match=False, + return_expectations={ + "date": {"earliest": "1900-01-01", "latest": "2022-01-01"}, + "rate": "exponential_increase", + "incidence": 0.99, + }, + ), + ethnicity_5=patients.with_these_clinical_events( + ethnicity_codes_ctv3, + returning="category", + find_last_match_in_period=True, + include_date_of_match=False, + return_expectations={ + "category": {"ratios": {"1": 0.2, "2": 0.2, "3": 0.2, "4": 0.2, "5": 0.2}}, + "incidence": 0.75, + }, + ), + ethnicity_5_date=patients.with_these_clinical_events( + ethnicity_codes_ctv3, + returning="date", + find_last_match_in_period=True, + return_expectations={ + "date": {"earliest": "1960-01-01", "latest": "2022-01-02"} + }, + ), + + ethnicity_individual_new=patients.with_these_clinical_events( + ethnicity_codes_individual_snomed, + returning="category", + find_last_match_in_period=True, + include_date_of_match=False, + return_expectations={ + "category": {"ratios": {"Guamians": 0.6, "Fijian": 0.1, "Oceanian": 0.1, "Samoan": 0.1, "Senegalese": 0.1}}, + "incidence": 0.75, + }, + ), + + ethnicity_new_5=patients.with_these_clinical_events( + ethnicity_codes_snomed, + returning="category", + find_last_match_in_period=True, + include_date_of_match=False, + return_expectations={ + "category": {"ratios": {"1": 0.6, "2": 0.1, "3": 0.1, "4": 0.1, "5": 0.1}}, + "incidence": 0.75, + }, + ), + + + + # Ethnicity using SNOMED codes - returns latest in period + ethnicity_primis_5=patients.with_these_clinical_events( + eth2001, + returning="category", + find_last_match_in_period=True, + include_date_of_match=False, + return_expectations={ + "category": {"ratios": {"1": 0.2, "2": 0.2, "3": 0.2, "4": 0.2, "5": 0.2}}, + "incidence": 0.75, + }, + ), + ethnicity_primis_5_date=patients.with_these_clinical_events( + eth2001, + returning="date", + find_last_match_in_period=True, + return_expectations={ + "date": {"earliest": "1960-01-01", "latest": "2022-01-02"} + }, + ), + + ethnicity_sus_5 = patients.with_ethnicity_from_sus( + returning="group_6", + use_most_frequent_code=True, + return_expectations={ + "category": {"ratios": {"1": 0.2, "2": 0.2, "3": 0.2, "4": 0.2, "5": 0.2}}, + "incidence": 0.75, + }, + ), + + ethnicity_sus_5_white= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_5='1'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + + ethnicity_sus_5_mixed= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_5='2'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + + ethnicity_sus_5_asian= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_5='3'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + + ethnicity_sus_5_black= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_5='4'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + + ethnicity_sus_5_other= patients.categorised_as( + {"0": "DEFAULT", + "1": "ethnicity_sus_5='5'",}, + return_expectations={ + "category": { + "ratios": { + "1": 1, + } + }, + "incidence": 0.2, + }, + ), + + + ) + +clinical_variables = dict( + # ------------------- + # Clinical conditions + # ------------------- + # Chronic cardiac disease + chronic_cardiac_disease=patients.with_these_clinical_events( + chronic_cardiac_dis_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Chronic kidney disease + chronic_kidney_disease=patients.with_these_clinical_events( + chronic_kidney_dis_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Chronic liver disease + chronic_liver_disease=patients.with_these_clinical_events( + chronic_liver_dis_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Chronic respiratory disease + chronic_respiratory_disease=patients.with_these_clinical_events( + chronic_respiratory_dis_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Cancer (Haemotological) + cancer_haem=patients.with_these_clinical_events( + cancer_haem_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Cancer (Lung) + cancer_lung=patients.with_these_clinical_events( + cancer_lung_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Cancer (Other) + cancer_other=patients.with_these_clinical_events( + cancer_other_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Dementia + dementia=patients.with_these_clinical_events( + dementia_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Diabetes + diabetes=patients.with_these_clinical_events( + diabetes_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Housebound + housebound=patients.with_these_clinical_events( + housebound_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Hypertension + hypertension=patients.with_these_clinical_events( + hypertension_codes, + between=["index_date - 2 years", "index_date"], + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Learning disability + learning_disability=patients.with_these_clinical_events( + wider_ld_codes, + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.01,}, + ), + # Severe obesity + sev_obesity=patients.with_these_clinical_events( + sev_obesity_codes, + between=["index_date - 2 years", "index_date"], + returning="date", + date_format="YYYY-MM-DD", + find_last_match_in_period=True, + return_expectations={"incidence": 0.01,}, + ), +) + +demographic_variables = dict( + # Age + age=patients.age_as_of( + "index_date", + return_expectations={ + "rate": "universal", + "int": {"distribution": "population_ages"}, + }, + ), + # Age band + age_band=patients.categorised_as( + { + "missing": "DEFAULT", + "0-19": """ age >= 0 AND age < 20""", + "20-29": """ age >= 20 AND age < 30""", + "30-39": """ age >= 30 AND age < 40""", + "40-49": """ age >= 40 AND age < 50""", + "50-59": """ age >= 50 AND age < 60""", + "60-69": """ age >= 60 AND age < 70""", + "70-79": """ age >= 70 AND age < 80""", + "80+": """ age >= 80 AND age < 120""", + }, + return_expectations={ + "rate": "universal", + "category": { + "ratios": { + "0-19": 0.125, + "20-29": 0.125, + "30-39": 0.125, + "40-49": 0.125, + "50-59": 0.125, + "60-69": 0.125, + "70-79": 0.125, + "80+": 0.125, + } + }, + }, + ), + # Sex + sex=patients.sex( + return_expectations={ + "rate": "universal", + "category": {"ratios": {"M": 0.5, "F": 0.5}}, + } + ), + # Practice + practice=patients.registered_practice_as_of( + "index_date", + returning="pseudo_id", + return_expectations={ + "int": {"distribution": "normal", "mean": 25, "stddev": 5}, + "incidence": 0.5, + }, + ), + # Region + region=patients.registered_practice_as_of( + "index_date", + returning="nuts1_region_name", + return_expectations={ + "category": { + "ratios": { + "North East": 0.1, + "North West": 0.1, + "Yorkshire and the Humber": 0.1, + "East Midlands": 0.1, + "West Midlands": 0.1, + "East of England": 0.1, + "London": 0.2, + "South East": 0.1, + "South West": 0.1, + } + } + }, + ), + # IMD + imd=patients.categorised_as( + { + "0": "DEFAULT", + "1": """index_of_multiple_deprivation >=0 AND index_of_multiple_deprivation < 32800*1/5""", + "2": """index_of_multiple_deprivation >= 32800*1/5 AND index_of_multiple_deprivation < 32800*2/5""", + "3": """index_of_multiple_deprivation >= 32800*2/5 AND index_of_multiple_deprivation < 32800*3/5""", + "4": """index_of_multiple_deprivation >= 32800*3/5 AND index_of_multiple_deprivation < 32800*4/5""", + "5": """index_of_multiple_deprivation >= 32800*4/5 AND index_of_multiple_deprivation <= 32800 """, + }, + index_of_multiple_deprivation=patients.address_as_of( + "index_date", + returning="index_of_multiple_deprivation", + round_to_nearest=100, + ), + return_expectations={ + "rate": "universal", + "category": { + "ratios": { + "0": 0.01, + "1": 0.20, + "2": 0.20, + "3": 0.20, + "4": 0.20, + "5": 0.19, + } + }, + }, + ), + # registered + registered=patients.registered_as_of("index_date"), +) diff --git a/analysis/lib_phenotype_validation.py b/analysis/lib_phenotype_validation.py new file mode 100644 index 0000000..6a9a5ad --- /dev/null +++ b/analysis/lib_phenotype_validation.py @@ -0,0 +1,823 @@ +import datetime +import itertools +import matplotlib.gridspec as gridspec +import numpy as np +import os +import pandas as pd +import seaborn as sns + +from matplotlib import cm +from ebmdatalab import charts +from functools import reduce +from matplotlib import pyplot as plt +from upsetplot import * + + +def redact_round_table(df_in): + """Redacts counts <= 7 and rounds counts to nearest 5""" + df_out = df_in.where(df_in > 7, np.nan).apply(lambda x: 5 * round(x / 5)) + return df_out + + +def import_clean( + input_path, + definitions, + other_vars, + demographic_covariates, + clinical_covariates, + reg, + null, + date_min, + date_max, + time_delta, + output_path, + grouping, + code_dict="", + dates=False, + registered=True, + dates_check=True, +): + # Import + df_import = pd.read_feather(input_path) + + # Check whether output paths exist or not, create if missing + path_tables = f"output/{output_path}/{grouping}/tables/" + path_figures = f"output/{output_path}/{grouping}/figures/" + li_filepaths = [path_tables, path_figures] + + for filepath in li_filepaths: + exists = os.path.exists(filepath) + print(filepath) + if not exists: + print(filepath) + os.makedirs(filepath) + + # restrict to registered as of index date + if registered == True: + df_import = df_import[df_import[reg]] + + # Dates + if dates == True: + date_vars = [definition + "_date" for definition in definitions] + # Create variable that captures difference in measurement dates + date_diff_vars = [] + # Define start and end dates + start_date = datetime.datetime.strptime(date_min, "%Y-%m-%d") + end_date = datetime.datetime.strptime(date_max, "%Y-%m-%d") + for definition in definitions: + # Remove OpenSAFELY null dates + df_import.loc[ + df_import[definition + "_date"] == "1900-01-01", definition + "_date" + ] = np.nan + # Limit to period of interest + df_import[definition + "_date"] = pd.to_datetime( + df_import[definition + "_date"] + ) + df_import.loc[ + df_import[definition + "_date"] < start_date, definition + "_date" + ] = np.nan + df_import.loc[ + df_import[definition + "_date"] > end_date, definition + "_date" + ] = np.nan + # Remove the measurement if outside the date parameters + df_import.loc[df_import[definition + "_date"].isna(), definition] = np.nan + df_import + # Create difference between measurement dates + df_import[definition + "_date"] = ( + df_import[definition + "_date"] + .dt.to_period(time_delta) + .dt.to_timestamp() + ) + df_import = df_import.sort_values(by=["patient_id", definition + "_date"]) + df_import["date_diff_" + definition] = round( + df_import.groupby("patient_id")[definition + "_date"].diff() + / np.timedelta64(1, time_delta) + ) + date_diff_vars.append("date_diff_" + definition) + else: + date_vars = [] + date_diff_vars = [] + # Codes + if code_dict != "": + for key in code_dict: + df_import[key] = df_import[key].astype(float) + df_import[key] = df_import[key].replace(code_dict[key]) + # Subset to relevant columns + if dates_check: + dates = [f"{definition}_date" for definition in definitions] + else: + dates = [] + + df_clean = df_import[ + ["patient_id"] + + definitions + + other_vars + + date_vars + + date_diff_vars + + demographic_covariates + + clinical_covariates + + dates + ] + # Limit to relevant date range + df_clean = df_clean.sort_values(by="patient_id").reset_index(drop=True) + # Set null values to nan + for definition in definitions: + df_clean.loc[df_clean[definition].isin(null), definition] = np.nan + # Create order for categorical variables + for group in demographic_covariates + clinical_covariates: + if df_clean[group].dtype.name == "category": + li_order = sorted(df_clean[group].dropna().unique().tolist()) + df_clean[group] = df_clean[group].cat.reorder_categories( + li_order, ordered=True + ) + # Mark patients with value filled/missing for each definition + li_filled = [] + for definition in definitions: + df_fill = pd.DataFrame( + df_clean.groupby("patient_id")[definition].any().astype("int") + ).rename(columns={definition: definition + "_filled"}) + df_fill[definition + "_missing"] = 1 - df_fill[definition + "_filled"] + li_filled.append(df_fill) + + df_filled = pd.concat(li_filled, axis=1) + # Remove list from memory + del li_filled + df_clean = df_clean.merge(df_filled, on="patient_id") + + # Flag all filled/all missing + li_col_filled = [col for col in df_clean.columns if col.endswith("_filled")] + li_col_missing = [col for col in df_clean.columns if col.endswith("_missing")] + df_clean["all_filled"] = ( + df_clean[li_col_filled].sum(axis=1) == len(definitions) + ).astype(int) + df_clean["all_missing"] = ( + df_clean[li_col_missing].sum(axis=1) == len(definitions) + ).astype(int) + df_clean["any_filled"] = (df_clean[li_col_filled].sum(axis=1) > 0).astype(int) + + return df_clean + + +def simple_latest_common_comparison( + df_clean, + definitions, + reg, + other_vars, + output_path, + grouping, + code_dict, + missing_check=False, +): + for definition in definitions: + if missing_check: + df_clean = df_clean[df_clean[f"{definition}_date"] == "1900-01-01"] + vars = [s for s in other_vars if s.startswith(definition)] + df_subset = df_clean.loc[~df_clean[definition].isna()] + df_subset = df_subset[ + df_subset[definition].isin(code_dict[definition].values()) + ] + df_subset = df_subset[[definition] + vars].set_index(definition) + df_subset = df_subset.replace(0, np.nan) + # reorder columns + df_subset = df_subset[vars] + # find column with first instance of the maximum value + df_subset["max"] = df_subset.astype(float).idxmax(axis=1) + df_subset2 = df_subset + # returning 1 for the first column that contains the highest value and 0 for everything else + for col in df_subset2.columns: + df_subset2[col] = np.where(df_subset2["max"] == col, 1, 0) + # drop max column + df_subset2 = df_subset2[vars] + df_sum = redact_round_table(df_subset2.groupby(definition).sum()) + if missing_check: + df_sum.to_csv( + f"output/{output_path}/{grouping}/tables/simple_latest_common_{definition}_missing_{reg}.csv" + ) + else: + df_sum.to_csv( + f"output/{output_path}/{grouping}/tables/simple_latest_common_{definition}_{reg}.csv" + ) + + +def simple_state_change( + df_clean, definitions, reg, other_vars, output_path, grouping, missing_check=False +): + for definition in definitions: + # if missing_check: + # df_clean = df_clean[df_clean[f"{definition}_date"] == "1900-01-01"] + vars = [s for s in other_vars if s.startswith(definition)] + df_subset = ( + df_clean[[definition] + vars] + .replace(0, np.nan) + .set_index(definition) + .reset_index() + ) + ### sum all 'vars' which are not null + df_subset[f"{definition}_any"] = df_subset[vars].notnull().sum(axis=1) + ### all px with a latest ethnicity must have at least 1 defined ethnicity + ### If they only have 1 recorded ethnicity this must equal the latest ethnicity + ### replace 1 with NULL and count all with over one recorded ethnicity (i.e. latest plus another ethnicity) + df_subset[f"{definition}_any"] = df_subset[f"{definition}_any"].replace( + 1, np.nan + ) + df_subset["n"] = 1 + ### check if any px have latest ethnicity but no recorded ethnicity (this should be impossible!) + # df_any_check=df_subset + # df_any_check[f"{definition}_any_check"]=df_any_check[f"{definition}_any"]==0 + # df_any_check[f"{definition}_any_check"]=df_any_check[f"{definition}_any_check"].replace(False, np.nan) + # df_any_check=df_any_check.groupby(definition).count() + # df_any_check=df_any_check[f"{definition}_any_check"] + # df_any_check.to_csv( + # f"output/{output_path}/{grouping}/tables/simple_{definition}_any_check.csv" + # ) + + # Count + df_subset2 = df_subset.loc[~df_subset[definition].isna()] + df_subset3 = redact_round_table( + df_subset2.groupby(definition).count() + ).reset_index() + if missing_check: + df_subset3.to_csv( + f"output/{output_path}/{grouping}/tables/simple_state_change_{definition}_missing_{reg}.csv" + ) + else: + df_subset3.to_csv( + f"output/{output_path}/{grouping}/tables/simple_state_change_{definition}_{reg}.csv" + ) + + +def simple_patient_counts( + df_clean, + definitions, + reg, + defin, + demographic_covariates, + clinical_covariates, + output_path, + grouping, + categories=False, +): + suffix = "_filled" + subgroup = "with records" + if categories == True: + li_cat_def = [] + li_cat = ( + df_clean[definitions[0]] + .dropna() + .astype(str) + .sort_values() + .unique() + .tolist() + ) + for x in li_cat: + for definition in definitions: + df_clean.loc[df_clean[definition] == x, f"{x}_{definition}_filled"] = 1 + li_cat_def.append(f"{x}_{definition}") + definitions = li_cat_def + + # All with measurement + li_filled = [] + for definition in definitions: + df_temp = ( + df_clean[["patient_id", definition + suffix]] + .drop_duplicates() + .dropna() + .set_index("patient_id") + ) + li_filled.append(df_temp) + + df_temp = ( + df_clean[["patient_id", "all_filled", "all_missing"]] + .drop_duplicates() + .dropna() + .set_index("patient_id") + ) + li_filled.append(df_temp) + + df_temp2 = pd.concat(li_filled, axis=1) + df_temp2["population"] = 1 + # Remove list from memory + del li_filled + df_all = pd.DataFrame(df_temp2.sum()).T + df_all["group"], df_all["subgroup"] = ["all", subgroup] + df_all = df_all.set_index(["group", "subgroup"]) + + # By group + li_group = [] + for group in demographic_covariates + clinical_covariates: + li_filled_group = [] + for definition in definitions: + df_temp = ( + df_clean[["patient_id", definition + suffix, group]] + .drop_duplicates() + .dropna() + .reset_index(drop=True) + ) + li_filled_group.append(df_temp) + + df_temp = ( + df_clean[["patient_id", "all_filled", "all_missing", group]] + .drop_duplicates() + .dropna() + .reset_index(drop=True) + ) + li_filled_group.append(df_temp) + + df_reduce = reduce( + lambda df1, df2: pd.merge(df1, df2, on=["patient_id", group], how="outer"), + li_filled_group, + ) + df_reduce["population"] = 1 + # Remove list from memory + del li_filled_group + df_reduce2 = ( + df_reduce.sort_values(by=group) + .drop(columns=["patient_id"]) + .groupby(group) + .sum() + .reset_index() + ) + df_reduce2["group"] = group + df_reduce2 = df_reduce2.rename(columns={group: "subgroup"}) + li_group.append(df_reduce2) + df_all_group = pd.concat(li_group, axis=0, ignore_index=True).set_index( + ["group", "subgroup"] + ) + # Remove list from memory + del li_group + + # Redact + df_append = redact_round_table(df_all.append(df_all_group)) + if categories: + df_append.to_csv( + f"output/{output_path}/{grouping}/tables/simple_patient_counts_categories_{grouping}_{defin}_{reg}.csv" + ) + else: + df_append.to_csv( + f"output/{output_path}/{grouping}/tables/simple_patient_counts_{grouping}_{defin}_{reg}.csv" + ) + + +def upset( + df_clean, + output_path, + comparator_1, + comparator_2, + grouping, +): + # create csv for output checking + upset_output_check = df_clean[[comparator_1, comparator_2]] + upset_output_check[comparator_1] = df_clean[comparator_1].fillna("Unknown") + upset_output_check[comparator_2] = df_clean[comparator_2].fillna("Unknown") + upset_output_check = pd.crosstab( + upset_output_check[comparator_1], upset_output_check[comparator_2] + ) + upset_output_check.to_csv(f"output/{output_path}/figures/upset_output_check.csv") + del upset_output_check + + upset_df = df_clean.set_index(~df_clean[comparator_1].isnull()) + upset_df = upset_df.set_index(~upset_df[comparator_2].isnull(), append=True) + + upset_df[comparator_1] = upset_df[comparator_1].fillna("Unknown") + upset = UpSet(upset_df, intersection_plot_elements=0) + + upset.add_stacked_bars( + by=comparator_1, colors=cm.Pastel1, title="Count by ethnicity", elements=10 + ) + + upset.plot() + plt.savefig( + f"output/{output_path}/{grouping}/figures/upset_{comparator_1}_{comparator_2}.png" + ) + + +def upset_cat( + df_clean, + output_path, + comparator_1, + comparator_2, + other_vars, + grouping, +): + upset_cat_df = pd.DataFrame(df_clean[comparator_1]) + for definition in [comparator_1, comparator_2]: + for var in other_vars: + upset_cat_df[f"{var}_{definition}"] = ( + df_clean[definition].str.lower() == var + ) + + for definition in [comparator_1, comparator_2]: + for var in other_vars: + if var == other_vars[0] and definition == comparator_1: + upset_cat_df = upset_cat_df.set_index( + upset_cat_df[f"{var}_{definition}"] == True + ) + else: + upset_cat_df = upset_cat_df.set_index( + upset_cat_df[f"{var}_{definition}"] == True, append=True + ) + upset_cat_df.drop([f"{var}_{definition}"], axis=1, inplace=True) + + upset_cat_df[comparator_1] = upset_cat_df[comparator_1].fillna("Unknown") + upset_cat = UpSet(upset_cat_df, intersection_plot_elements=0) + + upset_cat.add_stacked_bars( + by=comparator_1, colors=cm.Pastel1, title="Count by ethnicity", elements=10 + ) + + upset_cat.plot() + plt.savefig( + f"output/{output_path}/{grouping}/figures/upset_category_{comparator_1}_{comparator_2}.png" + ) + + +def records_over_time( + df_clean, + definitions, + demographic_covariates, + clinical_covariates, + output_path, + filepath, + grouping, + reg, +): + """ + Count the number of records over time + + Arguments: + df_clean: a dataframe that has been cleaned using import_clean() + definitions: a list of derived variables to be evaluated + demographic_covariates: a list of demographic covariates + clinical_covariates: a list of clinical covariates + output_path: filepath to the output folder + filepath: filepath to the output file + + Returns: + .csv file (underlying data) + .png file (line plot) + """ + li_df = [] + for definition in definitions: + df_grouped = ( + df_clean[[definition + "_date", definition]] + .groupby(definition + "_date") + .count() + .reset_index() + .rename(columns={definition + "_date": "date"}) + .set_index("date") + ) + li_df.append(redact_round_table(df_grouped)) + df_all_time = ( + pd.concat(li_df) + .stack() + .reset_index() + .rename(columns={"level_1": "variable", 0: "value"}) + ) + del li_df + + fig, ax = plt.subplots(figsize=(12, 8)) + fig.autofmt_xdate() + sns.lineplot( + x="date", y="value", hue="variable", data=df_all_time, ax=ax + ).set_title("New records by month") + ax.legend().set_title("") + if len(df_all_time) > 0: + df_all_time.to_csv( + f"output/{output_path}/{grouping}/tables/records_over_time{filepath}_{reg}.csv" + ) + plt.savefig( + f"output/{output_path}/{grouping}/figures/records_over_time{filepath}_{reg}.png" + ) + + for group in demographic_covariates + clinical_covariates: + for definition in definitions: + df_grouped = ( + df_clean[[definition + "_date", definition, group]] + .groupby([definition + "_date", group]) + .count() + .reset_index() + .rename(columns={definition + "_date": "date"}) + .set_index(["date", group]) + ) + df_time = redact_round_table(df_grouped).reset_index() + fig, ax = plt.subplots(figsize=(12, 8)) + fig.autofmt_xdate() + sns.lineplot( + x="date", y=definition, hue=group, data=df_time, ax=ax + ).set_title(f"{definition} recorded by {group} and month") + ax.legend().set_title("") + if len(df_time) > 0: + df_time.to_csv( + f"output/{output_path}/{grouping}/tables/records_over_time_{definition}_{group}{filepath}_{reg}.csv" + ) + plt.savefig( + f"output/{output_path}/{grouping}/figures/records_over_time_{definition}_{group}{filepath}_{reg}.png" + ) + + +def records_over_time_perc( + df_clean, + definitions, + demographic_covariates, + clinical_covariates, + output_path, + filepath, + grouping, + reg, +): + """ + Count the number of records over time as a percentage of all records + + Arguments: + df_clean: a dataframe that has been cleaned using import_clean() + definitions: a list of derived variables to be evaluated + demographic_covariates: a list of demographic covariates + clinical_covariates: a list of clinical covariates + output_path: filepath to the output folder + filepath: filepath to the output file + + Returns: + .csv file (underlying data) + .png file (line plot) + """ + li_df = [] + for definition in definitions: + df_grouped = ( + df_clean[[definition + "_date", definition]] + .groupby(definition + "_date") + .count() + .reset_index() + .rename(columns={definition + "_date": "date"}) + .set_index("date") + ) + li_df.append(redact_round_table(df_grouped)) + df_all_time = ( + pd.concat(li_df) + .stack() + .reset_index() + .rename(columns={"level_1": "variable", 0: "value"}) + ) + df_all_time["sum"] = df_all_time.groupby("variable", sort=False)["value"].transform( + "sum" + ) + df_all_time["value"] = df_all_time["value"] / df_all_time["sum"] + del li_df + + fig, ax = plt.subplots(figsize=(12, 8)) + fig.autofmt_xdate() + sns.lineplot( + x="date", y="value", hue="variable", data=df_all_time, ax=ax + ).set_title("New records by month") + ax.legend().set_title("") + if len(df_all_time) > 0: + df_all_time.to_csv( + f"output/{output_path}/{grouping}/tables/records_over_time{filepath}_{reg}.csv" + ) + plt.savefig( + f"output/{output_path}/{grouping}/figures/records_over_time{filepath}_{reg}.png" + ) + + for group in demographic_covariates + clinical_covariates: + for definition in definitions: + df_grouped = ( + df_clean[[definition + "_date", definition, group]] + .groupby([definition + "_date", group]) + .count() + .reset_index() + .rename(columns={definition + "_date": "date"}) + .set_index(["date", group]) + ) + df_time = redact_round_table(df_grouped).reset_index() + df_time["sum"] = df_time.groupby(group, sort=False)[definition].transform( + "sum" + ) + df_time[definition] = df_time[definition] / df_time["sum"] * 100 + fig, ax = plt.subplots(figsize=(12, 8)) + fig.autofmt_xdate() + sns.lineplot( + x="date", y=definition, hue=group, data=df_time, ax=ax + ).set_title(f"{definition} recorded by {group} and month") + ax.legend().set_title("") + if len(df_time) > 0: + df_time.to_csv( + f"output/{output_path}/{grouping}/tables/records_over_time_{definition}_{group}{filepath}_{reg}.csv" + ) + plt.savefig( + f"output/{output_path}/{grouping}/figures/records_over_time_{definition}_{group}{filepath}_{reg}.png" + ) + + +def display_heatmap(df_clean, definitions, output_path): + # All with measurement + li_filled = [] + for definition in definitions: + df_temp = df_clean[["patient_id"]].drop_duplicates().set_index("patient_id") + df_temp[definition + "_filled"] = 1 + df_temp = ( + df_clean[["patient_id", definition + "_filled"]] + .drop_duplicates() + .dropna() + .set_index("patient_id") + ) + li_filled.append(df_temp) + + # Prepare data for heatmap input + df_temp2 = pd.concat(li_filled, axis=1) + # Remove list from memory + del li_filled + df_transform = df_temp2.replace(np.nan, 0) + df_dot = redact_round_table(df_transform.T.dot(df_transform)) + + # Create mask to eliminate duplicates in heatmap + mask = np.triu(np.ones_like(df_dot)) + np.fill_diagonal(mask[::1], 0) + + # Draw the heatmap with the mask + fig, ax = plt.subplots(figsize=(12, 8)) + sns.heatmap(df_dot, annot=True, mask=mask, fmt="g", cmap="YlGnBu", vmin=0) + # plt.show() + plt.savefig(f"output/{output_path}/figures/heatmap.png") + + +def simple_patient_counts_sus( + df_clean, + definitions_sus, + reg, + demographic_covariates, + clinical_covariates, + output_path, + grouping, + categories=False, +): + suffix = "_filled" + subgroup = "with records" + + # All with measurement + li_filled = [] + for definition in definitions_sus: + df_temp = ( + df_clean[["patient_id", definition + suffix]] + .drop_duplicates() + .dropna() + .set_index("patient_id") + ) + li_filled.append(df_temp) + df_temp = ( + df_clean[["patient_id", "all_filled", "all_missing", "any_filled"]] + .drop_duplicates() + .dropna() + .set_index("patient_id") + ) + li_filled.append(df_temp) + + df_temp2 = pd.concat(li_filled, axis=1) + df_temp2["population"] = 1 + # Remove list from memory + del li_filled + df_all = pd.DataFrame(df_temp2.sum()).T + df_all["group"], df_all["subgroup"] = ["all", subgroup] + df_all = df_all.set_index(["group", "subgroup"]) + + # By group + li_group = [] + for group in demographic_covariates + clinical_covariates: + li_filled_group = [] + for definition in definitions_sus: + df_temp = ( + df_clean[["patient_id", definition + suffix, group]] + .drop_duplicates() + .dropna() + .reset_index(drop=True) + ) + li_filled_group.append(df_temp) + + df_temp = ( + df_clean[["patient_id", "all_filled", "all_missing", "any_filled", group]] + .drop_duplicates() + .dropna() + .reset_index(drop=True) + ) + li_filled_group.append(df_temp) + + df_reduce = reduce( + lambda df1, df2: pd.merge(df1, df2, on=["patient_id", group], how="outer"), + li_filled_group, + ) + df_reduce["population"] = 1 + # Remove list from memory + del li_filled_group + df_reduce2 = ( + df_reduce.sort_values(by=group) + .drop(columns=["patient_id"]) + .groupby(group) + .sum() + .reset_index() + ) + df_reduce2["group"] = group + df_reduce2 = df_reduce2.rename(columns={group: "subgroup"}) + li_group.append(df_reduce2) + df_all_group = pd.concat(li_group, axis=0, ignore_index=True).set_index( + ["group", "subgroup"] + ) + # Remove list from memory + del li_group + + # Redact + df_append = redact_round_table(df_all.append(df_all_group)) + df_append.to_csv( + f"output/{output_path}/{grouping}/tables/simple_patient_counts_sus_{reg}.csv" + ) + + +def import_clean_sus( + input_path, + definitions_sus, + other_vars, + demographic_covariates, + clinical_covariates, + reg, + null, + date_min, + date_max, + time_delta, + output_path, + grouping, + code_dict="", + dates=False, + registered=True, + dates_check=True, +): + # Import + df_import = pd.read_feather(input_path) + + # Check whether output paths exist or not, create if missing + path_tables = f"output/{output_path}/{grouping}/tables/" + path_figures = f"output/{output_path}/{grouping}/figures/" + li_filepaths = [path_tables, path_figures] + + for filepath in li_filepaths: + exists = os.path.exists(filepath) + print(filepath) + if not exists: + print(filepath) + os.makedirs(filepath) + + # restrict to registered as of index date + if registered == True: + df_import = df_import[df_import[reg]] + + # Codes + if code_dict != "": + for key in code_dict: + df_import[key] = df_import[key].astype(float) + df_import[key] = df_import[key].replace(code_dict[key]) + # Subset to relevant columns + if dates_check: + dates = [f"{definition}_date" for definition in definitions_sus] + df_clean = df_import[ + ["patient_id"] + + definitions_sus + + other_vars + + demographic_covariates + + clinical_covariates + ] + # Limit to relevant date range + df_clean = df_clean.sort_values(by="patient_id").reset_index(drop=True) + # Set null values to nan + for definition in definitions_sus: + df_clean.loc[df_clean[definition].isin(null), definition] = np.nan + # Create order for categorical variables + for group in demographic_covariates + clinical_covariates: + if df_clean[group].dtype.name == "category": + li_order = sorted(df_clean[group].dropna().unique().tolist()) + df_clean[group] = df_clean[group].cat.reorder_categories( + li_order, ordered=True + ) + # Mark patients with value filled/missing for each definition + li_filled = [] + for definition in definitions_sus: + df_fill = pd.DataFrame( + df_clean.groupby("patient_id")[definition].any().astype("int") + ).rename(columns={definition: definition + "_filled"}) + df_fill[definition + "_missing"] = 1 - df_fill[definition + "_filled"] + li_filled.append(df_fill) + + df_filled = pd.concat(li_filled, axis=1) + # Remove list from memory + del li_filled + df_clean = df_clean.merge(df_filled, on="patient_id") + + # Flag all filled/all missing + li_col_filled = [col for col in df_clean.columns if col.endswith("_filled")] + li_col_missing = [col for col in df_clean.columns if col.endswith("_missing")] + + df_clean["any_filled"] = (df_clean[li_col_filled].sum(axis=1) > 0).astype(int) + + df_clean["all_filled"] = ( + df_clean[li_col_filled].sum(axis=1) == len(definitions_sus) + ).astype(int) + df_clean["all_missing"] = ( + df_clean[li_col_missing].sum(axis=1) == len(definitions_sus) + ).astype(int) + + return df_clean diff --git a/analysis/local/ONS_process.R b/analysis/local/ONS_process.R new file mode 100644 index 0000000..6776c54 --- /dev/null +++ b/analysis/local/ONS_process.R @@ -0,0 +1,140 @@ +################################################################################ +# Description: Script to combine TPP & ONS data for deaths, imd, and age +################ RUN LOCALLY ################################################### +# +# input: downloaded va Nomis:(https://www.nomisweb.co.uk/query/select/getdatasetbytheme.asp?opt=3&theme=&subgrp=) +# data/nomis_2021_11_22_213653.xlsx +# +# output: /data/ethnicity_ons.csv.gz +# +# Author: Colm D Andrews +# Date: 14/07/2022 +# +################################################################################ + +library("readxl") +library("tidyverse") +library("ggsci") + + +######### Ethnicity 2021 +# ONS data downloaded va Nomis:(https://www.nomisweb.co.uk/query/select/getdatasetbytheme.asp?opt=3&theme=&subgrp=) +eth_ons_2021 <- read_excel(here::here("data", "nomis_2022_12_01_124621.xlsx"), skip = 7, n_max = 21) %>% + mutate( + Ethnic_Group = str_split(`Ethnic group`, ": ", 2), + Ethnic_Group = sapply(Ethnic_Group, "[", 2), + Ethnic_Group = case_when( + Ethnic_Group == "English/Welsh/Scottish/Northern Irish/British" ~ "White British", + Ethnic_Group == "Irish" ~ "White Irish", + Ethnic_Group == "Arab" ~ "Any other ethnic group", + Ethnic_Group == "Gypsy or Irish Traveller" ~ "Other White", + TRUE ~ Ethnic_Group + ), + Ethnic_Group5 = case_when( + (Ethnic_Group == "White British" | Ethnic_Group == "White Irish" | Ethnic_Group == "Other White" |Ethnic_Group =="English, Welsh, Scottish, Northern Irish or British" | Ethnic_Group == "Roma" ) ~ "White", + (Ethnic_Group == "White and Black Caribbean" | Ethnic_Group == "White and Black African" | Ethnic_Group == "White and Asian" | Ethnic_Group == "Other Mixed or Multiple ethnic groups") ~ "Mixed", + (Ethnic_Group == "Indian" | Ethnic_Group == "Pakistani" | Ethnic_Group == "Bangladeshi" | Ethnic_Group == "Other Asian") ~ "Asian", + (Ethnic_Group == "African" | Ethnic_Group == "Caribbean" | Ethnic_Group == "Other Black") ~ "Black", + (Ethnic_Group == "Any other ethnic group" | Ethnic_Group == "Chinese" | Ethnic_Group == "Other Mixed or Multiple ethnic groups") ~ "Other" + ) + ) %>% + select(-`Ethnic group`, + -Wales) %>% + filter(Ethnic_Group != "All usual residents") + +eth_16_ons_2021_2001 <- eth_ons_2021 %>% + select(-Ethnic_Group5) %>% + pivot_longer(!starts_with("Ethnic"), names_to = "region", values_to = "N") %>% + group_by(region, Ethnic_Group) %>% + summarise(N = sum(N)) %>% + group_by(region) %>% + mutate( + Total = sum(N), + percentage = N / Total * 100, + group = "16" + ) + +eth_ons_2021_16_2011 <- eth_16_ons_2021_2001 %>% + # bind_rows(eth_5_ons_2021) %>% + mutate(cohort = "ONS") %>% + write_csv( here::here("data", "ethnicity_2021_census_2001_16_categories.csv.gz")) + + +eth_5_ons_2021_2001 <- eth_ons_2021 %>% + select(-Ethnic_Group) %>% + pivot_longer(!starts_with("Ethnic"), names_to = "region", values_to = "N") %>% + group_by(region, Ethnic_Group5) %>% + summarise(N = sum(N)) %>% + group_by(region) %>% + mutate( + Total = sum(N), + percentage = N / Total * 100, + group = "5" + ) %>% + rename("Ethnic_Group" = "Ethnic_Group5") + +eth_ons_2021_2001 <- eth_5_ons_2021_2001 %>% + # bind_rows(eth_5_ons_2021) %>% + mutate(cohort = "ONS") %>% + write_csv( here::here("data", "ethnicity_2021_census_2001_5_categories.csv.gz")) + + +# ### 2021 ONS with 2011 categories +# ONS data downloaded va Nomis:(https://www.nomisweb.co.uk/query/select/getdatasetbytheme.asp?opt=3&theme=&subgrp=) +eth_ons_2021 <- read_excel(here::here("data", "nomis_2022_12_01_124621.xlsx"), skip = 7, n_max = 21) %>% + mutate( + Ethnic_Group = str_split(`Ethnic group`, ": ", 2), + Ethnic_Group = sapply(Ethnic_Group, "[", 2), + Ethnic_Group = case_when( + Ethnic_Group == "English/Welsh/Scottish/Northern Irish/British" ~ "White British", + Ethnic_Group == "Irish" ~ "White Irish", + Ethnic_Group == "Arab" ~ "Any other ethnic group", + Ethnic_Group == "Gypsy or Irish Traveller" ~ "Other White", + TRUE ~ Ethnic_Group + ), + Ethnic_Group5 = case_when( + (Ethnic_Group == "White British" | Ethnic_Group == "White Irish" | Ethnic_Group == "Other White" |Ethnic_Group =="English, Welsh, Scottish, Northern Irish or British" | Ethnic_Group == "Roma" ) ~ "White", + (Ethnic_Group == "White and Black Caribbean" | Ethnic_Group == "White and Black African" | Ethnic_Group == "White and Asian" | Ethnic_Group == "Other Mixed or Multiple ethnic groups") ~ "Mixed", + (Ethnic_Group == "Indian" | Ethnic_Group == "Pakistani" | Ethnic_Group == "Bangladeshi" | Ethnic_Group == "Chinese" | Ethnic_Group == "Other Asian") ~ "Asian", + (Ethnic_Group == "African" | Ethnic_Group == "Caribbean" | Ethnic_Group == "Other Black") ~ "Black", + (Ethnic_Group == "Any other ethnic group" | Ethnic_Group == "Other Mixed or Multiple ethnic groups") ~ "Other" + ) + ) %>% + select(-`Ethnic group`, + -Wales) %>% + filter(Ethnic_Group != "All usual residents") + +eth_16_ons_2021 <- eth_ons_2021 %>% + select(-Ethnic_Group5) %>% + pivot_longer(!starts_with("Ethnic"), names_to = "region", values_to = "N") %>% + group_by(region, Ethnic_Group) %>% + summarise(N = sum(N)) %>% + group_by(region) %>% + mutate( + Total = sum(N), + percentage = N / Total * 100, + group = "16" + ) + +eth_ons_2021_16 <- eth_16_ons_2021 %>% + # bind_rows(eth_5_ons_2021) %>% + mutate(cohort = "ONS") %>% + write_csv( here::here("data", "ethnicity_2021_census_16_categories.csv.gz")) + +eth_5_ons_2021 <- eth_ons_2021 %>% + select(-Ethnic_Group) %>% + pivot_longer(!starts_with("Ethnic"), names_to = "region", values_to = "N") %>% + group_by(region, Ethnic_Group5) %>% + summarise(N = sum(N)) %>% + group_by(region) %>% + mutate( + Total = sum(N), + percentage = N / Total * 100, + group = "5" + ) %>% + rename("Ethnic_Group" = "Ethnic_Group5") + +eth_ons_2021_5 <- eth_5_ons_2021 %>% + # bind_rows(eth_5_ons_2021) %>% + mutate(cohort = "ONS") %>% + write_csv( here::here("data", "ethnicity_2021_census_5_categories.csv.gz")) diff --git a/analysis/local/appendix.R b/analysis/local/appendix.R new file mode 100644 index 0000000..1564e5f --- /dev/null +++ b/analysis/local/appendix.R @@ -0,0 +1,1217 @@ +library("gt") +library("tidyverse") +library("here") +library("glue") +library("stringr") +library("ggsci") +library("scales") +library(Gmisc, quietly = TRUE) +library(htmlTable) +library(grid) +library(magrittr) + + +# # patient counts +SUSyesno <- read_csv(here::here("output", "released", "made_locally", "local_patient_counts_registered.csv")) %>% + filter(subgroup == "Yes" | subgroup == "No") %>% + mutate(subgroup = recode(subgroup, + Yes = "Present", + No = "Absent" + )) %>% + arrange(group, rev(subgroup)) + +SUS <- read_csv(here::here("output", "released", "made_locally", "local_patient_counts_registered.csv")) %>% + filter(subgroup != "Yes" & subgroup != "No") %>% + bind_rows(SUSyesno) %>% + mutate( + group = case_when( + group == "age_band" ~ "age band", + group == "learning_disability" ~ "learning disability", + group == "imd" ~ "IMD", + TRUE ~ group + ), + subgroup = recode(subgroup, + F = "Female", + M = "Male" + ), + population = as.character(scales::comma(round(as.numeric(population), 0))), + left_paren = "(", + right_paren = ")" + ) %>% + unite("5 SNOMED:2022 pp inc", left_paren, `5 SNOMED:2022 pp inc`, right_paren, sep = "") %>% + filter(`5 SNOMED:2022` != "- (-)") %>% + select(-`all filled`) + +my_cols <- setNames(c("group", "", "SNOMED 2022", "SNOMED 2022 with SUS data", "Population", "Percentage point increase\n with SUS data"), names(SUS)) + + +SUS_gt <- SUS %>% + gt(groupname_col = "group") %>% + cols_label(!!!my_cols) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 1: Count of patients with a recorded ethnicity in OpenSAFELY-TPP (proportion of registered TPP population) by clinical and demographic subgroups. All counts are rounded to the nearest 5."), + ) + + +SUS_gt %>% gtsave(here::here("output", "released", "made_locally", "patient_counts.html")) + + + +# patient counts 5 group +SUS5yesno <- read_csv(here::here("output", "released", "made_locally", "local_patient_counts_categories_5_registered.csv")) %>% + filter(subgroup == "Yes" | subgroup == "No") %>% + mutate(subgroup = recode(subgroup, + Yes = "Present", + No = "Absent" + )) %>% + arrange(group, rev(subgroup)) + +SUS5 <- read_csv(here::here("output", "released", "made_locally", "local_patient_counts_categories_5_registered.csv")) %>% + filter(subgroup != "Yes" & subgroup != "No") %>% + bind_rows(SUS5yesno) %>% + mutate( + group = case_when( + group == "age_band" ~ "age band", + group == "learning_disability" ~ "learning disability", + group == "imd" ~ "IMD", + TRUE ~ group + ), + subgroup = recode(subgroup, + F = "Female", + M = "Male" + ) + ) %>% + filter(`Asian 5 SNOMED:2022` != "- (-)") + +my_cols <- setNames(c("group", "", rep(c("SNOMED 2022", "SNOMED 2022 with SUS data"), 5)), names(SUS5)) + + +SUS5 <- SUS5 %>% + gt(groupname_col = "group") %>% + tab_spanner(label = "Asian", columns = c(3, 4)) %>% + tab_spanner(label = "Black", columns = c(5, 6)) %>% + tab_spanner(label = "Mixed", columns = c(7, 8)) %>% + tab_spanner(label = "White", columns = c(9, 10)) %>% + tab_spanner(label = "Other", columns = c(11, 12)) %>% + cols_label(!!!my_cols) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + row_group.as_column = TRUE, + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 2: Count of patients with a recorded ethnicity in OpenSAFELY TPP by ethnicity group (proportion of registered TPP population) and clinical and demographic subgroups. All counts are rounded to the nearest 5. "), + ) + +SUS5 %>% gtsave(here::here("output", "released", "made_locally", "patient_counts_5_group.html")) + + + + +SUS16yesno <- read_csv(here::here("output", "released", "made_locally", "local_patient_counts_categories_16_registered.csv")) %>% + filter(subgroup == "Yes" | subgroup == "No") %>% + mutate(subgroup = recode(subgroup, + Yes = "Present", + No = "Absent" + )) %>% + arrange(group, rev(subgroup)) + +# patient counts 16 group +SUS16 <- read_csv(here::here("output", "released", "made_locally", "local_patient_counts_categories_16_registered.csv")) %>% + filter(subgroup != "Yes" & subgroup != "No") %>% + bind_rows(SUS16yesno) %>% + mutate( + group = case_when( + group == "age_band" ~ "age band", + group == "learning_disability" ~ "learning disability", + group == "imd" ~ "IMD", + TRUE ~ group + ), + subgroup = recode(subgroup, + F = "Female", + M = "Male" + ) + ) %>% + filter(`Indian 16 SNOMED:2022` != "- (-)") + +my_cols <- setNames(c("group", "", rep(c("SNOMED 2022", "SNOMED 2022\n with SUS data"), 16)), names(SUS16)) + + +SUS16 <- SUS16 %>% + gt(groupname_col = "group") %>% + tab_spanner(label = "Indian", columns = c(3, 4)) %>% + tab_spanner(label = "Pakistani", columns = c(5, 6)) %>% + tab_spanner(label = "Bangladeshi", columns = c(7, 8)) %>% + tab_spanner(label = "Other Asian", columns = c(9, 10)) %>% + tab_spanner(label = "Caribbean", columns = c(11, 12)) %>% + tab_spanner(label = "African", columns = c(13, 14)) %>% + tab_spanner(label = "Other Black", columns = c(15, 16)) %>% + tab_spanner(label = "White and Black Caribbean", columns = c(17, 18)) %>% + tab_spanner(label = "White and Black African", columns = c(19, 20)) %>% + tab_spanner(label = "White and Asian", columns = c(21, 22)) %>% + tab_spanner(label = "Other Mixed", columns = c(23, 24)) %>% + tab_spanner(label = "White British", columns = c(25, 26)) %>% + tab_spanner(label = "White Irish", columns = c(27, 28)) %>% + tab_spanner(label = "Other White", columns = c(29, 30)) %>% + tab_spanner(label = "Chinese", columns = c(31, 32)) %>% + tab_spanner(label = "Any other ethnic group", columns = c(33, 34)) %>% + cols_label(!!!my_cols) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + row_group.as_column = TRUE, + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 3: Count of patients with a recorded ethnicity in OpenSAFELY TPP by ethnicity group (proportion of registered TPP population) and clinical and demographic subgroups. All counts are rounded to the nearest 5."), + ) + +SUS16 %>% gtsave(here::here("output", "released", "made_locally", "patient_counts_16_group.html")) + +# # latest / any recorded ethnicity +anyrepeated <- read_csv(here::here("output","released","made_locally","local_state_change_ethnicity_new_5_registered.csv")) %>% + rename_with(str_to_title) %>% + gt( ) %>% + cols_label(`Latest Ethnicity-\n5 Snomed:2022` = "") %>% + cols_label(Supplemented = "Any discordant") %>% + tab_spanner(label="Latest Recorded Ethnicity", columns=1) %>% + tab_spanner(label="Any Recorded Ethnicity", columns=c(2:7)) %>% + tab_options( + table.align = "left", + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 4: Count of patients with at least one recording of each ethnicity (proportion of latest ethnicity)."), + ) +# +# anyrepeated %>% gtsave(here::here("output","released","made_locally","latest_any.html")) + +# latest / most frequent recorded ethnicity +latestcommon <- read_csv(here::here("output", "released", "made_locally", "local_latest_common_ethnicity_new_5_expanded_registered.csv")) %>% + rename_with(str_to_title) %>% + gt() %>% + cols_label(`Latest Ethnicity-\n5 Snomed:2022` = "") %>% + tab_spanner(label = "Latest Recorded Ethnicity", columns = 1) %>% + tab_spanner(label = "Most Frequent Ethnicity", columns = c(2:6)) %>% + tab_options( + table.align = "left", + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 4: Count of patients’ most frequently recorded ethnicity (proportion of latest ethnicity). "), + ) + +latestcommon %>% gtsave(here::here("output", "released", "made_locally", "latest_frequent.html")) + + +# count of all ethnicities +listed <- read_csv(here::here("output", "released", "ethnicity", "snomed_ethnicity_counts.csv"), col_types = cols(code = col_character())) %>% + rename_with(str_to_title) %>% + select(Code, Term, Snomedcode_count) %>% + filter(Snomedcode_count != 0) %>% + arrange(Term) %>% + gt() %>% + cols_label(Snomedcode_count = "Count") %>% + tab_options( + table.align = "left", + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 9: Count of individual ethnicity code use"), + ) + +listed %>% gtsave(here::here("output", "released", "made_locally", "percodelist.html")) + +# plot over time +time <- read_csv(here::here("output", "released", "across_time_years.csv")) %>% + mutate(measure = recode(measure, + First = "Earliest recorded ethnicity", + last = "Latest recorded ethnicity" + )) + + +breakvec <- seq( + from = as.Date("1900-01-01"), to = as.Date("2020-01-01"), + by = "10 year" +) + +plot_time <- time %>% ggplot(aes(x = Date, y = n, colour = measure)) + + geom_line(stat = "identity") + + theme_classic() + + theme( + plot.title = element_text(size = 10), + axis.text.x = element_text( + size = 5, + hjust = 0.3, + vjust = 0 + ) + ) + + scale_color_lancet() + + xlab("\nYear") + + theme(legend.title = element_blank()) + + scale_x_date(breaks = breakvec, date_labels = "%Y") + + scale_y_continuous(name = "Number of records", labels = scales::comma) + + ggtitle("Figure 3: Recording of ethnicity over time for latest and first recorded ethnicity. Unknown dates of recording may be stored as '1900-01-01'") + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + "fig_3_plot_time.pdf" + ), + plot_time, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + + + +# ONS tables +ethnicity_na_2021 <- + read_csv(here::here("output", "released", "made_locally", "ethnic_group_2021_registered_with_2021_categories.csv")) %>% + mutate( + cohort = case_when( + cohort == "ONS" ~ "2021 Census", + cohort == "new" ~ "SNOMED:2022\n[amended to 2021 grouping]", + cohort == "supplemented" ~ "SNOMED:2022 supplemented with SUS data\n[amended to 2021 grouping]" + ), + cohort = fct_relevel(cohort, "2021 Census", "SNOMED:2022\n[amended to 2021 grouping]", "SNOMED:2022 supplemented with SUS data\n[amended to 2021 grouping]"), + Ethnic_Group = fct_relevel( + Ethnic_Group, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + +ONS_tab_2021 <- ethnicity_na_2021 %>% + mutate( + left_paren = " (", + right_paren = ")", + percentage = round(percentage, 2), + N = comma(N) + ) %>% + unite("N_perc", N, left_paren, percentage, right_paren, sep = "") %>% + select(cohort, Ethnic_Group, region, N_perc) %>% + arrange(Ethnic_Group) %>% + pivot_wider(names_from = c("Ethnic_Group", "cohort"), values_from = N_perc) %>% + mutate(region = fct_relevel(region, "England")) %>% + arrange(region) + +my_cols_ons <- setNames(c("Region", rep(c("SNOMED 2022\n(amended to 2021 grouping)", "SNOMED 2022 with SUS data\n(amended to 2021 grouping)", "2021 ONS Census"), 5)), names(ONS_tab_2021)) + +ONS_tab_2021 %>% + gt(groupname_col = "region") %>% + tab_spanner(label = "Asian", columns = c(2, 3, 4)) %>% + tab_spanner(label = "Black", columns = c(5, 6, 7)) %>% + tab_spanner(label = "Mixed", columns = c(8, 9, 10)) %>% + tab_spanner(label = "White", columns = c(11, 12, 13)) %>% + tab_spanner(label = "Other", columns = c(14, 15, 16)) %>% + cols_label(!!!my_cols_ons) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + row_group.as_column = TRUE, + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 8: Count of patients with a recorded ethnicity in OpenSAFELY TPP [amended to the 2021 ethnicity grouping] (proportion of registered TPP population) and 2021 ONS Census counts (proportion of 2021 ONS Census population). All counts are rounded to the nearest 5. "), + ) %>% + gtsave(here::here("output", "released", "made_locally", "ons_table_2021_with_2021_categories.html")) + +#### ONS tables 2001 +ethnicity_na_2001 <- + read_csv(here::here("output", "released", "made_locally", "ethnic_group_2021_registered_with_2001_categories.csv")) %>% + mutate(Ethnic_Group = fct_relevel(Ethnic_Group, "Asian", "Black", "Mixed", "White", "Other")) + +ONS_tab_2001 <- ethnicity_na_2001 %>% + mutate( + left_paren = " (", + right_paren = ")", + percentage = round(percentage, 2), + N = comma(N) + ) %>% + unite("N_perc", N, left_paren, percentage, right_paren, sep = "") %>% + select(cohort, Ethnic_Group, region, N_perc) %>% + arrange(Ethnic_Group) %>% + pivot_wider(names_from = c("Ethnic_Group", "cohort"), values_from = N_perc) %>% + mutate(region = fct_relevel(region, "England")) %>% + arrange(region) + +my_cols_ons <- setNames(c("Region", rep(c("SNOMED 2022", "SNOMED 2022 with SUS data", "2021 ONS Census [amended to 2001 grouping]"), 5)), names(ONS_tab_2001)) + +ONS_tab_2001 %>% + gt(groupname_col = "region") %>% + tab_spanner(label = "Asian", columns = c(2, 3, 4)) %>% + tab_spanner(label = "Black", columns = c(5, 6, 7)) %>% + tab_spanner(label = "Mixed", columns = c(8, 9, 10)) %>% + tab_spanner(label = "Other", columns = c(14, 15, 16)) %>% + tab_spanner(label = "White", columns = c(11, 12, 13)) %>% + cols_label(!!!my_cols_ons) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + row_group.as_column = TRUE, + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 7: Count of patients with a recorded ethnicity in OpenSAFELY TPP by ethnicity group (proportion of registered TPP population) and 2021 ONS Census counts [amended to 2001 grouping] (proportion of 2021 ONS Census population). All counts are rounded to the nearest 5. "), + ) %>% + gtsave(here::here("output", "released", "made_locally", "ons_table_2021_with_2001_categories.html")) + + +### ONS with 2021 categories +ethnicity_na_2021 <- + read_csv(here::here("output", "released", "made_locally", "ethnic_group_2021_registered_with_2021_categories.csv")) %>% + mutate( + cohort = case_when( + cohort == "ONS" ~ "2021 Census", + cohort == "new" ~ "SNOMED:2022\n[amended to 2021 grouping]", + cohort == "supplemented" ~ "SNOMED:2022 supplemented with SUS data\n[amended to 2021 grouping]" + ), + cohort = fct_relevel(cohort, "2021 Census", "SNOMED:2022\n[amended to 2021 grouping]", "SNOMED:2022 supplemented with SUS data\n[amended to 2021 grouping]"), + Ethnic_Group = fct_relevel( + Ethnic_Group, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + + +## create difference in percentage between ONS and TPP (for plotting) +ethnicity_plot_na_diff_2021 <- ethnicity_na_2021 %>% + group_by(Ethnic_Group, region, group) %>% + arrange(cohort) %>% + mutate(diff = percentage - first(percentage)) %>% + select(region, Ethnic_Group, cohort, diff, group) + +ethnicity_na_2021 <- ethnicity_na_2021 %>% + left_join(ethnicity_plot_na_diff_2021, by = c("region", "Ethnic_Group", "cohort", "group")) +## 5 group ethnicity plot NA removed for Regions +ethnicity_plot_na_2021 <- ethnicity_na_2021 %>% + filter(region != "England", group == "5") %>% + ggplot(aes(x = Ethnic_Group, y = percentage, fill = cohort)) + + geom_bar(stat = "identity", position = "dodge") + + facet_wrap(~region) + + theme_classic() + + theme(text = element_text(size = 20)) + + theme(axis.text.x = element_text( + size = 12, + hjust = 0.75, + vjust = 0 + )) + + coord_flip() + + scale_fill_manual(values = c("#00468BFF", "#ED0000FF", "#925E9FFF")) + + xlab("") + + ylab("\nProportion of ethnicities") + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_text(aes(x = Ethnic_Group, y = percentage, label = ifelse(cohort == "2021 Census", "", paste0(round(diff, digits = 1), "%"))), size = 3.4, position = position_dodge(width = 0.9), vjust = 0.3, hjust = -0.2) + + ggtitle("Figure 2: Barplot showing the proportion of 2021 Census and TPP populations (amended to 2021 grouping) per ethnicity grouped into 5 groups per NUTS-1 region (excluding\nthose without a recorded ethnicity). Annotated with percentage point difference between 2021 Census and TPP populations.") + + theme(plot.title = element_text(size = 16)) + + + +ggsave( + filename = here::here("output", "released", "made_locally", "ONS_ethnicity_regions_2021_with_2021_regions.pdf"), + ethnicity_plot_na_2021, + dpi = 600, + width = 50, + height = 30, + units = "cm" +) + + +## 5 group ethnicity plot NA removed for England +ethnicity_plot_eng_na_2021 <- ethnicity_na_2021 %>% + filter(region == "England", group == "5") %>% + ggplot(aes(x = Ethnic_Group, y = percentage, fill = cohort)) + + geom_bar(stat = "identity", position = "dodge") + + theme_classic() + + theme(text = element_text(size = 20)) + + theme(axis.text.x = element_text( + size = 20, + hjust = 0, + vjust = 0 + )) + + coord_flip() + + scale_fill_manual(values = c("#00468BFF", "#ED0000FF", "#925E9FFF")) + + xlab("") + + ylab("\nProportion of ethnicities") + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_text(aes(x = Ethnic_Group, y = percentage, label = ifelse(cohort == "2021 Census", "", paste0(round(diff, digits = 1), "%"))), size = 3.4, position = position_dodge(width = 0.9), vjust = 0.3, hjust = -0.2) + + ggtitle("Figure 1: Barplot showing the proportion of 2021 Census and TPP populations (amended to 2021 grouping) per ethnicity grouped into 5 groups (excluding those\nwithout a recorded ethnicity). Annotated with percentage point difference between 2021 Census and TPP populations.") + + theme(plot.title = element_text(size = 10)) + + + +ggsave( + filename = here::here("output", "released", "made_locally", "ONS_ethnicity_eng_2021_with_2021_regions.pdf"), + ethnicity_plot_eng_na_2021, + dpi = 600, + width = 30, + height = 15, + units = "cm" +) + +### SUS and New codelist comparison +df_sus_new_cross <- read_csv(here::here("output", "released", "simple_sus_crosstab_long_5_registered.csv")) + + +### Get count of patients with unknown ethnicity +population <- read_csv(here::here("output", "released", "simple_patient_counts_5_sus_registered.csv"), col_types = (cols())) %>% + filter(group == "all") %>% + summarise( + ethnicity_new_5 = "Unknown", + population = population - ethnicity_new_5_filled + ) + +### Get count of patients per 5 group ethnicity +ethnicity_cat <- + read_csv(here::here("output", "released", "simple_patient_counts_categories_5_sus_registered.csv"), col_types = (cols())) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_5_filled", "", .), contains("_5_filled")) %>% + select(-contains("filled"), -contains("missing"), -contains("sus")) %>% + mutate( + Asian_anydiff = Asian_any - Asian_new, + Black_anydiff = Black_any - Black_new, + Mixed_anydiff = Mixed_any - Mixed_new, + White_anydiff = White_any - White_new, + Other_anydiff = Other_any - Other_new, + ) + +ethnicity_cat_pivot <- ethnicity_cat %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "codelist"), + names_pattern = "(.*)_(.*)", + values_to = "n" + ) %>% + filter(codelist == "new", group == "all") %>% + summarise( + ethnicity_new_5 = ethnicity, + population = n + ) %>% + bind_rows(population) + + + +df_sus_new_cross_perc <- df_sus_new_cross %>% + left_join(ethnicity_cat_pivot, by = "ethnicity_new_5") %>% + mutate( + percentage = round(`0` / population * 100, 1), + ethnicity_new_5 = fct_relevel( + ethnicity_new_5, + "Asian", "Black", "Mixed", "White", "Other", "Unknown" + ), + ethnicity_sus_5 = fct_relevel( + ethnicity_sus_5, + "Asian", "Black", "Mixed", "White", "Other", "Unknown" + ), + left_paren = " (", + right_paren = ")", + N = scales::comma(as.numeric(`0`)), + population = scales::comma(as.numeric(population)) + ) %>% + arrange(ethnicity_new_5, ethnicity_sus_5) %>% + unite("labl", N, left_paren, percentage, right_paren, sep = "", remove = F) %>% + unite("ethnicity_new_5", ethnicity_new_5, left_paren, population, right_paren, sep = "") %>% + select(-`0`, -percentage, -N) %>% + pivot_wider(names_from = c("ethnicity_sus_5"), values_from = labl) + +my_cols <- setNames(c("", "Asian", "Black", "Mixed", "White", "Other", "Unknown"), names(df_sus_new_cross_perc)) + + +df_sus_new_cross_table <- df_sus_new_cross_perc %>% + gt(groupname_col = "") %>% + tab_spanner(label = "Primary Care ethnicity", columns = c(1)) %>% + tab_spanner(label = "Secondary Care ethnicity", columns = c(2:7)) %>% + cols_label(!!!my_cols) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + row_group.as_column = TRUE, + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 5: Count of patients with a recorded ethnicity in Secondary Care by ethnicity group (proportion of Primary Care population). All counts are rounded to the nearest 5. "), + ) + + +df_sus_new_cross_table %>% gtsave(here::here("output", "released", "made_locally", "df_sus_new_cross_table.html")) + + +### Heatmap for SUS with Unknown +### Get count of patients with unknown ethnicity +population <- read_csv(here::here("output", "released", "simple_patient_counts_5_sus_registered.csv"), col_types = (cols())) %>% + filter(group == "all") %>% + summarise( + ethnicity_new_5 = "Unknown", + population = population - ethnicity_new_5_filled + ) + +### Get count of patients per 5 group ethnicity +ethnicity_cat <- + read_csv(here::here("output", "released", "simple_patient_counts_categories_5_sus_registered.csv"), col_types = (cols())) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_5_filled", "", .), contains("_5_filled")) %>% + select(-contains("filled"), -contains("missing"), -contains("sus")) %>% + mutate( + Asian_anydiff = Asian_any - Asian_new, + Black_anydiff = Black_any - Black_new, + Mixed_anydiff = Mixed_any - Mixed_new, + White_anydiff = White_any - White_new, + Other_anydiff = Other_any - Other_new, + ) + +ethnicity_cat_pivot <- ethnicity_cat %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "codelist"), + names_pattern = "(.*)_(.*)", + values_to = "n" + ) %>% + filter(codelist == "new", group == "all") %>% + summarise( + ethnicity_new_5 = ethnicity, + population = n + ) %>% + bind_rows(population) + + +df_sus_new_cross_nowhite <- df_sus_new_cross %>% + filter(ethnicity_new_5 != "White", ethnicity_sus_5 != "White") + + +df_sus_new_cross_perc <- df_sus_new_cross %>% + left_join(ethnicity_cat_pivot, by = "ethnicity_new_5") %>% + mutate(percentage = round(`0` / population * 100, 1)) %>% + mutate( + ethnicity_new_5 = fct_relevel( + ethnicity_new_5, + "Unknown", "Other", "White", "Mixed", "Black", "Asian" + ), + ethnicity_sus_5 = fct_relevel( + ethnicity_sus_5, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + + +# sus_heat_perc<- ggplot(df_sus_new_cross_perc, aes( ethnicity_sus_5,ethnicity_new_5, fill= percentage)) + +# geom_tile() + +# # scale_fill_viridis(discrete=FALSE,direction=-1) + +# # scale_fill_gradient(low="white", high="blue") + +# scale_fill_distiller(palette = "OrRd",direction = 1,name = "Proportion of SNOMED:2022") + +# geom_text(aes(label=percentage)) + +# ylab("SNOMED:2022\n") + xlab("\nSUS") + +# theme_ipsum() + +# theme( +# plot.title=element_text(size=10)) + +# ggtitle("Figure 1: Heat map showing frequency of pairwise occurrence of primary care and secondary care recorded ethnicity\nas a proportion of latest primary care recorded ethnicity") +# +# ggsave( +# filename = here::here( +# "output", +# "released", +# "made_locally", +# "fig_1_sus_plot_time.png" +# ), +# sus_heat_perc, +# dpi = 600, +# width = 30, +# height = 10, +# units = "cm" +# ) + +### SUS and New codelist comparison without unknown +df_sus_new_cross <- read_csv(here::here("output", "released", "simple_sus_crosstab_long_5_registered.csv")) + + +df_sus_new_cross_known <- df_sus_new_cross %>% + filter( + ethnicity_new_5 != "Unknown", + ethnicity_sus_5 != "Unknown" + ) %>% + group_by(ethnicity_new_5) %>% + mutate(population = sum(`0`)) %>% + ungroup() %>% + mutate( + percentage = round(`0` / population * 100, 1), + ethnicity_new_5 = fct_relevel( + ethnicity_new_5, + "Asian", "Black", "Mixed", "White", "Other" + ), + ethnicity_sus_5 = fct_relevel( + ethnicity_sus_5, + "Asian", "Black", "Mixed", "White", "Other" + ), + left_paren = " (", + right_paren = ")", + N = scales::comma(as.numeric(`0`)), + population = scales::comma(as.numeric(population)) + ) %>% + arrange(ethnicity_new_5, ethnicity_sus_5) %>% + unite("labl", N, left_paren, percentage, right_paren, sep = "", remove = F) %>% + unite("ethnicity_new_5", ethnicity_new_5, left_paren, population, right_paren, sep = "") %>% + select(-`0`, -percentage, -N) %>% + pivot_wider(names_from = c("ethnicity_sus_5"), values_from = labl) + + + +df_sus_new_cross_known_perc <- df_sus_new_cross %>% + filter( + ethnicity_new_5 != "Unknown", + ethnicity_sus_5 != "Unknown" + ) %>% + left_join(ethnicity_cat_pivot, by = "ethnicity_new_5") %>% + mutate( + percentage = round(`0` / population * 100, 1), + ethnicity_new_5 = fct_relevel( + ethnicity_new_5, + "Asian", "Black", "Mixed", "White", "Other" + ), + ethnicity_sus_5 = fct_relevel( + ethnicity_sus_5, + "Asian", "Black", "Mixed", "White", "Other" + ), + left_paren = " (", + right_paren = ")", + N = scales::comma(as.numeric(`0`)), + population = scales::comma(as.numeric(population)) + ) %>% + arrange(ethnicity_new_5, ethnicity_sus_5) %>% + unite("labl", N, left_paren, percentage, right_paren, sep = "", remove = F) %>% + unite("ethnicity_new_5", ethnicity_new_5, left_paren, population, right_paren, sep = "") %>% + select(-`0`, -percentage, -N) %>% + pivot_wider(names_from = c("ethnicity_sus_5"), values_from = labl) + +my_cols <- setNames(c("", "Asian", "Black", "Mixed", "White", "Other"), names(df_sus_new_cross_known_perc)) + +df_sus_new_cross_known_table <- df_sus_new_cross_known_perc %>% + gt(groupname_col = "") %>% + tab_spanner(label = "Primary Care ethnicity", columns = c(1)) %>% + tab_spanner(label = "Secondary Care ethnicity", columns = c(2:6)) %>% + cols_label(!!!my_cols) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + row_group.as_column = TRUE, + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 6: Count of patients with a recorded ethnicity in Secondary Care by ethnicity group excluding Unknown ethnicites (proportion of Primary Care population). All counts are rounded to the nearest 5. "), + ) + + +df_sus_new_cross_known_table %>% gtsave(here::here("output", "released", "made_locally", "df_sus_new_cross_known_table.html")) + +###### across time measures framework + +demographic_covariates <- c("age_band", "sex", "region", "imd") +clinical_covariates <- c("dementia", "diabetes", "hypertension", "learning_disability") +covariates <- c(demographic_covariates, clinical_covariates) + +input <- read_csv(here::here("output", "released", glue("ethnicity_5_rate.csv"))) +counts_plot <- input %>% + ggplot(aes(x = date, y = value, colour = factor(ethnicity))) + + geom_line(stat = "identity") + + ylim(0, 1) + + scale_x_date( + date_labels = "%Y", + breaks = seq.Date( + from = as.Date("1900-01-01"), + to = as.Date("2022-01-01"), + by = "5 years" + ) + ) + + geom_vline(xintercept = as.numeric(as.Date("2006-01-01"))) + + geom_vline(xintercept = as.numeric(as.Date("2012-01-01"))) + + theme_bw() + + theme( + axis.text.x = element_text(angle = 90, vjust = 0.5), + panel.grid.minor = element_blank() + ) + + scale_color_lancet() + + guides(colour = guide_legend(title = "")) + + ggtitle("Ethncity") +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + glue("qof_ethnicity_rate.png") + ), + counts_plot, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + +for (covar in covariates) { + input <- read_csv(here::here("output", "released", glue("{covar}_rate.csv"))) + fact <- names(input[, 1]) + counts_plot <- input %>% + ggplot(aes(x = date, y = value, colour = factor(covariant))) + + geom_line(stat = "identity") + + ylim(0, 1) + + scale_x_date( + date_labels = "%Y", + breaks = seq.Date( + from = as.Date("1900-01-01"), + to = as.Date("2022-01-01"), + by = "5 years" + ) + ) + + geom_vline(xintercept = as.numeric(as.Date("2006-01-01"))) + + geom_vline(xintercept = as.numeric(as.Date("2012-01-01"))) + + theme_bw() + + theme( + axis.text.x = element_text(angle = 90, vjust = 0.5), + panel.grid.minor = element_blank() + ) + + scale_color_lancet() + + guides(colour = guide_legend(title = "")) + + ggtitle(covar) + counts_plot + ggsave( + filename = here::here( + "output", + "released", + "made_locally", + glue("qof_{covar}_rate.png") + ), + counts_plot, + dpi = 600, + width = 30, + height = 10, + units = "cm" + ) +} + + +### null dates + +input <- read_csv(here::here("output", "released", "nulldate_rate.csv")) +counts_plot <- input %>% + ggplot(aes(x = date, y = null_date)) + + # geom_line(aes(x=date,y= population_living)) + + geom_line(stat = "identity") + + scale_x_date( + date_labels = "%Y", + breaks = seq.Date( + from = as.Date("1900-01-01"), + to = as.Date("2022-01-01"), + by = "5 years" + ) + ) + + # geom_vline(xintercept = as.numeric(as.Date("2006-01-01"))) + + # geom_vline(xintercept = as.numeric(as.Date("2012-01-01"))) + + theme_bw() + + theme( + axis.text.x = element_text(angle = 90, vjust = 0.5), + panel.grid.minor = element_blank() + ) + + scale_color_lancet() + + guides(colour = guide_legend(title = "")) + + ggtitle("Null Dates") + + scale_y_continuous(label = comma, "n") + +counts_plot +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + glue("null_dates.png") + ), + counts_plot, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + +input <- read_csv(here::here("output", "released", "nulldate_rate.csv")) +counts_plot <- input %>% + ggplot(aes(x = date, y = null_date, color = "null dates")) + + geom_line(aes(x = date, y = population_living, color = "population")) + + geom_line(stat = "identity") + + scale_x_date( + date_labels = "%Y", + breaks = seq.Date( + from = as.Date("1900-01-01"), + to = as.Date("2022-01-01"), + by = "5 years" + ) + ) + + # geom_vline(xintercept = as.numeric(as.Date("2006-01-01"))) + + # geom_vline(xintercept = as.numeric(as.Date("2012-01-01"))) + + theme_bw() + + theme( + axis.text.x = element_text(angle = 90, vjust = 0.5), + panel.grid.minor = element_blank() + ) + + scale_color_lancet() + + guides(colour = guide_legend(title = "")) + + ggtitle("Null Dates") + + scale_y_continuous(label = comma, "n") + +counts_plot +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + glue("popn_null_dates.png") + ), + counts_plot, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + + +######### Categories +prop_reg_cat <- + read_csv(here::here("output", "released", "simple_patient_counts_categories_5_group_registered.csv"), col_types = (cols())) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_5_filled", "", .), contains("_5_filled")) %>% + select(-contains("filled"), -contains("missing"), -contains("sus"), -contains("any")) %>% + mutate( + Asian_supplementeddiff = Asian_supplemented - Asian_new, + Black_supplementeddiff = Black_supplemented - Black_new, + Mixed_supplementeddiff = Mixed_supplemented - Mixed_new, + White_supplementeddiff = White_supplemented - White_new, + Other_supplementeddiff = Other_supplemented - Other_new, + ) + + +prop_reg_cat_pivot <- prop_reg_cat %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "codelist"), + names_pattern = "(.*)_(.*)", + values_to = "n" + ) %>% + mutate( + percentage = round(n / population * 100, 1), + group = case_when( + group == "age_band" ~ "Age\nBand", + group == "all" ~ "All", + group == "dementia" ~ "Dementia", + group == "diabetes" ~ "Diabetes", + group == "hypertension" ~ "Hypertension", + group == "imd" ~ "IMD", + group == "learning_disability" ~ "Learning\nDisability", + group == "region" ~ "Region", + group == "sex" ~ "Sex" + ), + group = fct_relevel( + group, + "All", "Age\nBand", "Sex", "Region", "IMD", + "Dementia", "Diabetes", "Hypertension", "Learning\nDisability" + ), + subgroup = case_when( + subgroup == "M" ~ "Male", + subgroup == "F" ~ "Female", + TRUE ~ subgroup + ), + across("subgroup", str_replace, "True", "Present"), + across("subgroup", str_replace, "False", "Absent"), + across("ethnicity", str_replace, "_ethnicity_new_5_filled", "") + ) %>% + mutate( + ethnicity = fct_relevel( + ethnicity, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + +prop_reg_cat_hline_new <- prop_reg_cat_pivot %>% + arrange(ethnicity, group) %>% + group_by(ethnicity, codelist) %>% + mutate(percentage = first(percentage)) %>% + ungroup() %>% + filter(codelist == "new") +prop_reg_cat_hline_supplemented <- prop_reg_cat_pivot %>% + arrange(ethnicity, group) %>% + group_by(ethnicity, codelist) %>% + mutate(percentage = first(percentage)) %>% + ungroup() %>% + filter(codelist == "supplemented") + +prop_reg_cat_pivot <- prop_reg_cat_pivot %>% + mutate( + codelist = case_when( + codelist == "new" ~ "SNOMED:2022", + codelist == "supplementeddiff" ~ "SNOMED:2022 supplemented with SUS data", + T ~ codelist + ), + codelist = fct_relevel(codelist, "supplemented", "SNOMED:2022 supplemented with SUS data", "SNOMED:2022") + ) + + +### completeness proportion categorical +prop_reg_cat <- + read_csv(here::here("output", "released", "simple_patient_counts_categories_5_group_registered.csv"), col_types = (cols())) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_5_filled", "", .), contains("_5_filled")) %>% + select(-contains("filled"), -contains("missing"), -contains("sus"), -contains("any")) %>% + mutate( + Asian_supplementeddiff = Asian_supplemented - Asian_new, + Black_supplementeddiff = Black_supplemented - Black_new, + Mixed_supplementeddiff = Mixed_supplemented - Mixed_new, + White_supplementeddiff = White_supplemented - White_new, + Other_supplementeddiff = Other_supplemented - Other_new, + ) + +prop_reg_cat_pivot <- prop_reg_cat %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "codelist"), + names_pattern = "(.*)_(.*)", + values_to = "n" + ) %>% + mutate( + percentage = round(n / population * 100, 1), + group = case_when( + group == "age_band" ~ "Age\nBand", + group == "all" ~ "All", + group == "dementia" ~ "Dementia", + group == "diabetes" ~ "Diabetes", + group == "hypertension" ~ "Hypertension", + group == "imd" ~ "IMD", + group == "learning_disability" ~ "Learning\nDisability", + group == "region" ~ "Region", + group == "sex" ~ "Sex" + ), + group = fct_relevel( + group, + "All", "Age\nBand", "Sex", "Region", "IMD", + "Dementia", "Diabetes", "Hypertension", "Learning\nDisability" + ), + subgroup = case_when( + subgroup == "M" ~ "Male", + subgroup == "F" ~ "Female", + TRUE ~ subgroup + ), + across("subgroup", str_replace, "True", "Present"), + across("subgroup", str_replace, "False", "Absent"), + across("ethnicity", str_replace, "_ethnicity_new_5_filled", "") + ) %>% + mutate( + ethnicity = fct_relevel( + ethnicity, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + +prop_reg_cat_hline_new <- prop_reg_cat_pivot %>% + arrange(ethnicity, group) %>% + group_by(ethnicity, codelist) %>% + mutate(percentage = first(percentage)) %>% + ungroup() %>% + filter(codelist == "new") +prop_reg_cat_hline_supplemented <- prop_reg_cat_pivot %>% + arrange(ethnicity, group) %>% + group_by(ethnicity, codelist) %>% + mutate(percentage = first(percentage)) %>% + ungroup() %>% + filter(codelist == "supplemented") + +prop_reg_cat_pivot <- prop_reg_cat_pivot %>% + mutate( + codelist = case_when( + codelist == "new" ~ "SNOMED:2022", + codelist == "supplementeddiff" ~ "SNOMED:2022 supplemented with SUS data", + T ~ codelist + ), + codelist = fct_relevel(codelist, "supplemented", "SNOMED:2022 supplemented with SUS data", "SNOMED:2022") + ) + + +prop_reg_cat_plot <- prop_reg_cat_pivot %>% + filter( + codelist != "supplemented", + subgroup != "missing" + ) %>% + ggplot(aes(x = subgroup, y = percentage, alpha = codelist, fill = group)) + + scale_alpha_discrete(range = c(0.2, 1)) + + geom_hline( + data = prop_reg_cat_hline_new, + aes(yintercept = percentage), color = "#00468BFF", alpha = 0.6 + ) + + geom_hline( + data = prop_reg_cat_hline_supplemented, + aes(yintercept = percentage), color = "#00468BFF", alpha = 0.1 + ) + + geom_bar(stat = "identity", position = "stack") + + facet_grid(group ~ ethnicity, scales = "free", space = "free", shrink = FALSE) + + theme_classic() + + theme(text = element_text(size = 30)) + + theme(axis.text.x = element_text( + size = 25, + hjust = 0.5, + vjust = 0 + )) + + theme(strip.text.y = element_text(angle = 0)) + + coord_flip() + + scale_fill_lancet() + + xlab("") + + ylab("\nProportion of registered TPP patients") + + guides(fill = "none", alpha = guide_legend("")) + + theme( + legend.position = "bottom", + panel.spacing = unit(1.1, "lines") + ) + + ggtitle("Figure 1: Barplot showing proportion of registered TPP population with a recorded ethnicity by clinical and demographic subgroups,\nbased on primary care records (solid bars) and when supplemented with secondary care data (pale bars).") + + +# prop_reg_cat_plot +# +# ggsave( +# filename =here::here("output","released","made_locally", "completeness_cat.pdf" +# ), +# prop_reg_cat_plot, +# dpi = 600, +# width = 100, +# height = 60, +# units = "cm" +# ) diff --git a/analysis/local/combine_ons_sus.R b/analysis/local/combine_ons_sus.R new file mode 100644 index 0000000..66a7b20 --- /dev/null +++ b/analysis/local/combine_ons_sus.R @@ -0,0 +1,171 @@ +################################################################################ +# Description: Script to combine TPP & ONS data ethnicity +# +# input: /data/ethnicity_ons.csv.gz +# +# output: /output/tables/ethnic_group.csv +# +# Author: Colm D Andrews +# Date: 14/07/2022 +# +################################################################################ + + +## import libraries +library('tidyverse') +library('gtsummary') +# library('ggalluvial') + +fs::dir_create(here::here("output","tests")) + +## import ONS Census data +eth_ons_input_2001<-read_csv(here::here("data","ethnicity_2021_census_2001_5_categories.csv.gz")) +eth_ons_input_2021 <- read_csv(here::here("data","ethnicity_2021_census_5_categories.csv.gz")) + +### Add England to ONS Census data +eth_ons <-eth_ons_input_2001 %>% + group_by(group,Ethnic_Group,cohort) %>% + summarise(N=sum(N)) %>% + group_by(group,cohort) %>% + mutate(N=N, + Total=sum(N), + region="England") %>% + bind_rows(eth_ons_input_2001) + +eth_ons_2021 <-eth_ons_input_2021 %>% + group_by(group,Ethnic_Group,cohort) %>% + summarise(N=sum(N)) %>% + group_by(group,cohort) %>% + mutate(N=N, + Total=sum(N), + region="England") %>% + bind_rows(eth_ons_input_2021) + +# get total population per region for OS data +population <- read_csv(here::here("output","released","simple_patient_counts_5_sus_registered.csv"),col_types =(cols())) %>% + filter(group=="region" | group=="all" ) %>% + summarise(subgroup=subgroup, + population_new = ethnicity_new_5_filled, + population_supplemented = any_filled) %>% + pivot_longer(contains("population"), + names_to = c( "cohort"), + names_pattern = "_(.*)", + values_to = "Total" + ) + +# filter OS data to regions +ethnicity <- + read_csv(here::here("output","released","simple_patient_counts_categories_5_group_registered.csv"),col_types =(cols())) %>% + filter(group=="region" | group=="all") %>% + select(-population) + +ethnicity_2001 <- ethnicity %>% + # prune column headings + rename_with(~sub("ethnicity_","",.),contains("ethnicity_")) %>% + rename_with(~sub("_5_filled","",.),contains("_5_filled")) %>% + # remove unused columns + select(-contains("filled"),-contains("missing"),-contains("sus")) %>% + pivot_longer( + cols = c(contains("_")), + names_to = c( "ethnicity","cohort"), + names_pattern = "(.*)_(.*)", + values_to = "N" + ) %>% + filter(cohort!="any") %>% + inner_join(population,by=c("subgroup","cohort")) %>% + summarise( + region=case_when(subgroup=="with records"~"England", + TRUE~subgroup), + Ethnic_Group = fct_relevel(ethnicity, + "Asian","Black","Mixed", "White","Other"), + N = N, + Total =Total, + group = 5, + cohort + ) %>% + bind_rows(eth_ons) %>% + mutate(N=round(N/5)*5, + Total=round(Total/5)*5, + percentage=N/Total * 100, + group=as.character(group), + region = case_when(region=="East"~"East of England", + region=="Yorkshire and The Humber"~"Yorkshire and the Humber", + TRUE~region)) %>% + filter(region!="Wales") + +write_csv(ethnicity_2001,here::here("output", "released","made_locally","ethnic_group_2021_registered_with_2001_categories.csv")) + +#### Check Sum of N against Total population (should be close with some errors from rounding) +ethnicity_2001 %>% + group_by(region,cohort) %>% + summarise(N= sum(N),percentage = sum(percentage),Total = median(Total),diff=N-Total) %>% + print(n = 30) %>% + write_csv(here::here("output", "tests","test_combine_sus_total.csv")) + +### 2021 amended SNOMED group +ethnicity_16 <- + read_csv(here::here("output","released","simple_patient_counts_categories_16_group_registered.csv"),col_types =(cols())) %>% + filter(group=="region" | group=="all") %>% + select(-population) + +ethnicity_2021 <- ethnicity_16 %>% + # prune column headings + rename_with(~sub("ethnicity_","",.),contains("ethnicity_")) %>% + rename_with(~sub("_16_filled","",.),contains("_16_filled")) %>% + # remove unused columns + select(-contains("filled"),-contains("missing"),-contains("sus")) %>% + pivot_longer( + cols = c(contains("_")), + names_to = c( "ethnicity","cohort"), + names_pattern = "(.*)_(.*)", + values_to = "N" + ) %>% + filter(cohort!="any") %>% + inner_join(population,by=c("subgroup","cohort")) %>% + mutate(ethnicity = gsub("_"," ",ethnicity)) %>% + summarise( + region=case_when(subgroup=="with records"~"England", + TRUE~subgroup), + Ethnic_Group = case_when( + (ethnicity == "White British" | ethnicity == "White Irish" | ethnicity == "Other White" |ethnicity =="English, Welsh, Scottish, Northern Irish or British" | ethnicity == "Roma" ) ~ "White", + (ethnicity == "White and Black Caribbean" | ethnicity == "White and Black African" | ethnicity == "White and Asian" | ethnicity == "Other Mixed or Multiple ethnic groups" | ethnicity == "Other Mixed") ~ "Mixed", + (ethnicity == "Indian" | ethnicity == "Pakistani" | ethnicity == "Bangladeshi" | ethnicity == "Chinese" | ethnicity == "Other Asian") ~ "Asian", + (ethnicity == "African" | ethnicity == "Caribbean" | ethnicity == "Other Black") ~ "Black", + (ethnicity == "Any other ethnic group") ~ "Other" + ), + N = N, + Total =Total, + group = 5, + cohort, + ) %>% + group_by(group,cohort,Ethnic_Group,region) %>% + summarise(N= sum(N), + Total = median(Total)) %>% + bind_rows(eth_ons_2021) %>% + mutate(N=round(N/5)*5, + Total=round(Total/5)*5, + percentage=N/Total * 100, + group=as.character(group), + region = case_when(region=="East"~"East of England", + region=="Yorkshire and The Humber"~"Yorkshire and the Humber", + TRUE~region)) %>% + filter(region!="Wales") + +write_csv(ethnicity_2021,here::here("output", "released","made_locally","ethnic_group_2021_registered_with_2021_categories.csv")) + +#### Check Sum of N against Total population (should be close with some errors from rounding) +ethnicity_2021 %>% + group_by(region,cohort) %>% + summarise(N= sum(N),percentage = sum(percentage),Total = median(Total),diff=N-Total) %>% + print(n = 30) %>% + write_csv(here::here("output", "tests","test_combine_sus_2021_total.csv")) + + +### Check Ethnicity 2021 vs ethnicity 2001 (should have large increase for Asian and equivalent drop for other) +ethnicity_2021 %>% + left_join(ethnicity_2001,by = c("group","cohort","Ethnic_Group","region")) %>% + mutate(diff = N.x - N.y) %>% + arrange(diff) %>% + print(n = 150) %>% + write_csv(here::here("output", "tests","test_combine_sus_2021_vs_2011.csv")) + diff --git a/analysis/local/local_manuscript_plots.R b/analysis/local/local_manuscript_plots.R new file mode 100644 index 0000000..a08aa67 --- /dev/null +++ b/analysis/local/local_manuscript_plots.R @@ -0,0 +1,1103 @@ +# Author: Colm D Andrews +# Date: 14/07/2022 +# +################################################################################ +library(rlang) +library(tidyverse) +library(scales) +library(readr) +library(ggsci) +library(ggpubr) +library(ggforce) +library(glue) +library(arrow) +library(hrbrthemes) +library(viridis) +library(stringr) +library(ggplot2) +library(ggalluvial) +library(ggrepel) +library(ggh4x) + +####### NA removed +prop_reg <- + read_csv(here::here("output", "released", "simple_patient_counts_5_sus_registered.csv"), col_types = (cols())) %>% + select("group", "subgroup", starts_with("ethnicity_new_5"), starts_with("any"), "population") %>% + mutate( + ethnicity_new_5_percentage = round(ethnicity_new_5_filled / population * 100, 1), + any_percentage = round(any_filled / population * 100, 1), + group = case_when( + group == "age_band" ~ "Age\nBand", + group == "all" ~ "All", + group == "dementia" ~ "Dementia", + group == "diabetes" ~ "Diabetes", + group == "hypertension" ~ "Hypertension", + group == "imd" ~ "IMD", + group == "learning_disability" ~ "Learning\nDisability", + group == "region" ~ "Region", + group == "sex" ~ "Sex" + ), + group = fct_relevel( + group, + "All", "Age\nBand", "Sex", "Region", "IMD", + "Dementia", "Diabetes", "Hypertension", "Learning\nDisability" + ), + subgroup = case_when( + subgroup == "M" ~ "Male", + subgroup == "F" ~ "Female", + TRUE ~ subgroup + ), + across("subgroup", str_replace, "True", "Present"), + across("subgroup", str_replace, "False", "Absent") + ) %>% + filter(subgroup != "missing") %>% + mutate(any_percentage = any_percentage - ethnicity_new_5_percentage) %>% + pivot_longer( + cols = c(starts_with("ethnicity_new_5"), starts_with("any")), + names_to = c("ethnicity", ".value"), + names_pattern = "(.*)_(.*)" + ) %>% + mutate( + ethnicity = case_when( + ethnicity == "ethnicity_new_5" ~ "SNOMED:2022", + ethnicity == "any" ~ "SNOMED:2022 supplemented with SUS data" + ), + ethnicity = fct_relevel(ethnicity, "SNOMED:2022 supplemented with SUS data", "SNOMED:2022") + ) + + + +prop_reg_plot <- prop_reg %>% + ggplot(aes(x = subgroup, y = percentage, alpha = ethnicity, fill = group)) + + scale_alpha_discrete(range = c(0.2, 1)) + + geom_hline(aes(yintercept = percentage[which(group == "All" & ethnicity == "SNOMED:2022")]), color = "#00468BFF", alpha = 0.5) + + geom_hline(aes(yintercept = sum(percentage[which(group == "All")])), color = "#00468BFF", alpha = 0.1) + + geom_bar(stat = "identity", position = "stack") + + facet_grid(group ~ ., scales = "free_y", space = "free_y") + + theme_classic() + + theme(text = element_text(size = 20)) + + theme(axis.text.x = element_text( + size = 20, + hjust = 0.5, + vjust = 0 + )) + + theme(strip.text.y = element_text(angle = 0)) + + coord_flip() + + scale_fill_lancet() + + xlab("") + + ylab("\nProportion of registered TPP patients") + + guides(fill = "none", alpha = guide_legend("")) + + theme(legend.position = "bottom") + + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + "prop_reg_plot.png" + ), + prop_reg_plot, + dpi = 600, + width = 25, + height = 30, + units = "cm" +) + +######### Categories +prop_reg_cat <- + read_csv(here::here("output", "released", "simple_patient_counts_categories_5_group_registered.csv"), col_types = (cols())) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_5_filled", "", .), contains("_5_filled")) %>% + select(-contains("filled"), -contains("missing"), -contains("sus"), -contains("any")) %>% + mutate( + Asian_supplementeddiff = Asian_supplemented - Asian_new, + Black_supplementeddiff = Black_supplemented - Black_new, + Mixed_supplementeddiff = Mixed_supplemented - Mixed_new, + White_supplementeddiff = White_supplemented - White_new, + Other_supplementeddiff = Other_supplemented - Other_new, + ) + + +prop_reg_cat_pivot <- prop_reg_cat %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "codelist"), + names_pattern = "(.*)_(.*)", + values_to = "n" + ) %>% + mutate( + percentage = round(n / population * 100, 1), + group = case_when( + group == "age_band" ~ "Age\nBand", + group == "all" ~ "All", + group == "dementia" ~ "Dementia", + group == "diabetes" ~ "Diabetes", + group == "hypertension" ~ "Hypertension", + group == "imd" ~ "IMD", + group == "learning_disability" ~ "Learning\nDisability", + group == "region" ~ "Region", + group == "sex" ~ "Sex" + ), + group = fct_relevel( + group, + "All", "Age\nBand", "Sex", "Region", "IMD", + "Dementia", "Diabetes", "Hypertension", "Learning\nDisability" + ), + subgroup = case_when( + subgroup == "M" ~ "Male", + subgroup == "F" ~ "Female", + TRUE ~ subgroup + ), + across("subgroup", str_replace, "True", "Present"), + across("subgroup", str_replace, "False", "Absent"), + across("ethnicity", str_replace, "_ethnicity_new_5_filled", "") + ) %>% + mutate( + ethnicity = fct_relevel( + ethnicity, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + +prop_reg_cat_hline_new <- prop_reg_cat_pivot %>% + arrange(ethnicity, group) %>% + group_by(ethnicity, codelist) %>% + mutate(percentage = first(percentage)) %>% + ungroup() %>% + filter(codelist == "new") +prop_reg_cat_hline_supplemented <- prop_reg_cat_pivot %>% + arrange(ethnicity, group) %>% + group_by(ethnicity, codelist) %>% + mutate(percentage = first(percentage)) %>% + ungroup() %>% + filter(codelist == "supplemented") + +prop_reg_cat_pivot <- prop_reg_cat_pivot %>% + mutate( + codelist = case_when( + codelist == "new" ~ "SNOMED:2022", + codelist == "supplementeddiff" ~ "SNOMED:2022 supplemented with SUS data", + T ~ codelist + ), + codelist = fct_relevel(codelist, "supplemented", "SNOMED:2022 supplemented with SUS data", "SNOMED:2022") + ) + + + +prop_reg_cat_plot <- prop_reg_cat_pivot %>% + filter( + codelist != "supplemented", + subgroup != "missing" + ) %>% + ggplot(aes(x = subgroup, y = percentage, alpha = codelist, fill = group)) + + scale_alpha_discrete(range = c(0.2, 1)) + + geom_hline( + data = prop_reg_cat_hline_new, + aes(yintercept = percentage), color = "#00468BFF", alpha = 0.6 + ) + + geom_hline( + data = prop_reg_cat_hline_supplemented, + aes(yintercept = percentage), color = "#00468BFF", alpha = 0.1 + ) + + geom_bar(stat = "identity", position = "stack") + + facet_grid(group ~ ethnicity, scales = "free", space = "free", shrink = FALSE) + + theme_classic() + + theme(text = element_text(size = 30)) + + theme(axis.text.x = element_text( + size = 25, + hjust = 0.5, + vjust = 0 + )) + + theme(strip.text.y = element_text(angle = 0)) + + coord_flip() + + scale_fill_lancet() + + xlab("") + + ylab("\nProportion of registered TPP patients") + + guides(fill = "none", alpha = guide_legend("")) + + theme( + legend.position = "bottom", + panel.spacing = unit(1.1, "lines") + ) + +prop_reg_cat_plot + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + "prop_reg_cat_plot.png" + ), + prop_reg_cat_plot, + dpi = 600, + width = 100, + height = 60, + units = "cm" +) + + + +### SUS and New codelist comparison +df_sus_new_cross <- read_csv(here::here("output", "released", "simple_sus_crosstab_long_5_registered.csv")) + + +### Get count of patients with unknown ethnicity +population <- read_csv(here::here("output", "released", "simple_patient_counts_5_sus_registered.csv"), col_types = (cols())) %>% + filter(group == "all") %>% + summarise( + ethnicity_new_5 = "Unknown", + population = population - ethnicity_new_5_filled + ) + +### Get count of patients per 5 group ethnicity +ethnicity_cat <- + read_csv(here::here("output", "released", "simple_patient_counts_categories_5_sus_registered.csv"), col_types = (cols())) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_5_filled", "", .), contains("_5_filled")) %>% + select(-contains("filled"), -contains("missing"), -contains("sus")) %>% + mutate( + Asian_anydiff = Asian_any - Asian_new, + Black_anydiff = Black_any - Black_new, + Mixed_anydiff = Mixed_any - Mixed_new, + White_anydiff = White_any - White_new, + Other_anydiff = Other_any - Other_new, + ) + +ethnicity_cat_pivot <- ethnicity_cat %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "codelist"), + names_pattern = "(.*)_(.*)", + values_to = "n" + ) %>% + filter(codelist == "new", group == "all") %>% + summarise( + ethnicity_new_5 = ethnicity, + population = n + ) %>% + bind_rows(population) + + +df_sus_new_cross_nowhite <- df_sus_new_cross %>% + filter(ethnicity_new_5 != "White", ethnicity_sus_5 != "White") + + +df_sus_new_cross_perc <- df_sus_new_cross %>% + left_join(ethnicity_cat_pivot, by = "ethnicity_new_5") %>% + mutate(percentage = round(`0` / population * 100, 1)) %>% + mutate( + ethnicity_new_5 = fct_relevel( + ethnicity_new_5, + "Unknown", "Other", "White", "Mixed", "Black", "Asian" + ), + ethnicity_sus_5 = fct_relevel( + ethnicity_sus_5, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + + +sus_heat_perc <- ggplot(df_sus_new_cross_perc, aes(ethnicity_sus_5, ethnicity_new_5, fill = percentage)) + + geom_tile() + + # scale_fill_viridis(discrete=FALSE,direction=-1) + + # scale_fill_gradient(low="white", high="blue") + + scale_fill_distiller(palette = "OrRd", direction = 1, name = "Proportion of primary care ethnicity group") + + geom_text(aes(label = percentage)) + + ylab("primary care ethnicity\n") + + xlab("\nSecondary care ethnicity") + + theme_ipsum() + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + "sus_heat_perc.png" + ), + sus_heat_perc, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + +df_sus_new_cross_perc_unk <- df_sus_new_cross_perc %>% + filter( + ethnicity_new_5 != "Unknown", + ethnicity_sus_5 != "Unknown" + ) %>% + group_by(ethnicity_new_5) %>% + mutate(population = sum(`0`)) %>% + ungroup() %>% + mutate(percentage = round(`0` / population * 100, 1)) + +sus_heat_perc_unk <- ggplot(df_sus_new_cross_perc_unk, aes(ethnicity_sus_5, ethnicity_new_5, fill = percentage)) + + geom_tile() + + # scale_fill_viridis(discrete=FALSE,direction=-1) + + # scale_fill_gradient(low="white", high="blue") + + scale_fill_distiller(palette = "OrRd", direction = 1, name = "Proportion of SNOMED:2022") + + geom_text(aes(label = percentage)) + + ylab("SNOMED:2022\n") + + xlab("\nSUS") + + theme_ipsum() + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + "sus_heat_perc_unk.png" + ), + sus_heat_perc_unk, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + +########### + +perc_unk <- df_sus_new_cross_perc_unk %>% + mutate(matches = ethnicity_new_5 == ethnicity_sus_5) %>% + group_by(matches) %>% + summarise(N = sum(`0`)) + + +######## primary vs secondary Denom = all patients + +df_secondary_new_cross_perc <- df_sus_new_cross %>% + # mutate(population = population$population[population$group=="all"]) %>% + # mutate(percentage=round(`0`/population*100,1)) %>% + mutate( + ethnicity_new_5 = fct_relevel( + ethnicity_new_5, + "Unknown", "Other", "White", "Mixed", "Black", "Asian" + ), + ethnicity_sus_5 = fct_relevel( + ethnicity_sus_5, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + +bennett_pal <- c("#FFB700", "#F20D52", "#FF369C", "#FF7CFE", "#9C54E6", "#5323B3") + +# opt1<-c( +# "#FFB700", +# "#F20D52", +# "#FF369C", +# "#FF7CFE", +# "#9C54E6", +# "#5323B3" +# ) +# +# opt2<-c( +# "#FFB700", +# "#F20D52", +# "#FF369C", +# "#9C54E6", +# "#5323B3", +# "#3FB5FF") +# +# opt3<-c( +# "#FFB700", +# "#F20D52", +# "#FF369C", +# "#9C54E6", +# "#5323B3", +# "#17D7E6") +# +# opt4<-c("#FFB700", +# "#F20D52", +# "#FF369C", +# "#5323B3", +# "#5A71F3", +# "#3FB5FF") +# +# opt5<-c("#FFB700", +# "#F20D52", +# "#FF369C", +# "#5323B3", +# "#5A71F3", +# "#17D7E6") +# +# opt6<-c("#FFD23B", +# "#F20D52", +# "#FF369C", +# "#FF7CFE", +# "#9C54E6", +# "#5323B3") +# +# opt7<-c("#FFD23B", +# "#F20D52", +# "#FF369C", +# "#9C54E6", +# "#5323B3", +# "#3FB5FF") +# +# opt8<-c("#FFD23B", +# "#F20D52", +# "#FF369C", +# "#9C54E6", +# "#5323B3", +# "#17D7E6") +# +# opt9<-c( +# "#FFD23B", +# "#F20D52", +# "#FF369C", +# "#5323B3", +# "#5A71F3", +# "#3FB5FF") +# +# opt10<-c("#FFD23B", +# "#F20D52", +# "#FF369C", +# "#5323B3", +# "#5A71F3", +# "#17D7E6") + +# alluvial_func<-function(palette){ +# alluvial<- ggplot(as.data.frame(df_secondary_new_cross_perc), +# aes(y = `0`, axis1 = ethnicity_new_5, axis2 = ethnicity_sus_5)) + +# geom_alluvium(aes(fill = ethnicity_new_5)) + +# geom_stratum(aes(fill = ethnicity_sus_5)) + +# geom_label(stat = "stratum", aes(label = after_stat(stratum))) + +# scale_x_discrete(limits = c("ethnicity_new_5", "ethnicity_sus_5"), expand = c(.05, .05)) + +# scale_fill_manual(values=rev(get(palette)), na.value = NA) + +# theme_minimal() + +# ggtitle("") +# +# # scale_fill_manual(values=rev(c("#FFD23B","#F20D52","#FF7CFE","#5323B3","#3FB5FF","#17D7E6"))) + +# +# ggsave(filename = here::here( +# "output", +# "released", +# "made_locally", +# glue("alluvial_{palette}.png") +# ), +# alluvial, +# dpi = 600, +# width = 50, +# height = 30, +# units = "cm" +# ) +# } + +# for(i in 1:10){ +# alluvial_func(glue("opt{i}")) +# } + +alluvial <- ggplot( + as.data.frame(df_secondary_new_cross_perc), + aes(y = `0`, axis1 = ethnicity_new_5, axis2 = ethnicity_sus_5) +) + + geom_alluvium(aes(fill = ethnicity_new_5)) + + geom_stratum(aes(fill = ethnicity_sus_5)) + + # geom_text(stat = "stratum", aes(label = after_stat(stratum)), colour = "white",size = 10) + + scale_x_discrete(limits = c("ethnicity_new_5", "ethnicity_sus_5"), expand = c(.05, .05), labels = c("ethnicity_new_5" = "Primary Care ethnicity", "ethnicity_sus_5" = "Secondary Care ethnicity"), position = "top") + + scale_fill_manual(values = rev(c("#FFD23B", "#808080", "#FF7C00", "#5323B3", "#5A71F3", "#17D7E6")), na.value = NA) + + #theme_minimal() + + ggtitle("") + + theme( + axis.title.y = element_blank(), + axis.text.y = element_blank(), + axis.ticks.y = element_blank(), + axis.text.x = element_text(size = 20) + ) + + theme( + panel.background = element_rect(fill = "white"), + panel.grid.major = element_blank(), + panel.grid.minor = element_blank() + ) + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_label_repel(stat = "stratum", + aes(label = after_stat(stratum), + fill = after_stat(stratum)), + colour = "white", + size = 10, + fontface = 'bold', + direction = "x", + show.legend = F) + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + glue("secondary_care_alluvial.png") + ), + alluvial, + dpi = 600, + width = 50, + height = 30, + units = "cm" +) + +##### only discrepancy alluvial +df_secondary_new_cross_perc <- df_secondary_new_cross_perc %>% + mutate(ethnicity_new_5_na = case_when(ethnicity_new_5=="Unknown"~ethnicity_sus_5), + ethnicity_new_5_na = fct_relevel( + ethnicity_new_5_na, + "Unknown", "Other", "White", "Mixed", "Black", "Asian" + )) + +alluvial_sus_pick <- ggplot( + as.data.frame(df_secondary_new_cross_perc), + aes(y = `0`, axis1 = ethnicity_new_5, axis2 = ethnicity_sus_5) +) + + geom_alluvium(aes(fill = ethnicity_new_5_na)) + + geom_stratum(aes(fill = ethnicity_sus_5)) + + # geom_text(stat = "stratum", aes(label = after_stat(stratum)), colour = "white",size = 10) + + scale_x_discrete(limits = c("ethnicity_new_5", "ethnicity_sus_5"), expand = c(.05, .05), labels = c("ethnicity_new_5" = "Primary Care ethnicity", "ethnicity_sus_5" = "Secondary Care ethnicity"), position = "top") + + scale_fill_manual(values = c( "#808080", "#FF7C00","#FFD23B", "#5323B3", "#5A71F3", "#17D7E6"), na.value = NA) + + #theme_minimal() + + ggtitle("") + + theme( + axis.title.y = element_blank(), + axis.text.y = element_blank(), + axis.ticks.y = element_blank(), + axis.text.x = element_text(size = 20) + ) + + theme( + panel.background = element_rect(fill = "black"), + panel.grid.major = element_blank(), + panel.grid.minor = element_blank() + ) + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + glue("secondary_care_alluvial_sus_pick.png") + ), + alluvial_sus_pick, + dpi = 600, + width = 50, + height = 30, + units = "cm" +) + +# alluvial picked up from SUS data +##### only discrepancy alluvial +df_secondary_new_cross_perc <- df_secondary_new_cross_perc %>% + mutate(ethnicity_new_5_na = case_when(ethnicity_new_5!="Unknown" & ethnicity_sus_5 !="Unknown" & ethnicity_new_5!=ethnicity_sus_5~ethnicity_new_5)) + +alluvial_disc <- ggplot( + as.data.frame(df_secondary_new_cross_perc), + aes(y = `0`, axis1 = ethnicity_new_5, axis2 = ethnicity_sus_5) +) + + geom_alluvium(aes(fill = ethnicity_new_5_na)) + + geom_stratum(aes(fill = ethnicity_sus_5)) + + # geom_text(stat = "stratum", aes(label = after_stat(stratum)), colour = "white",size = 10) + + scale_x_discrete(limits = c("ethnicity_new_5", "ethnicity_sus_5"), expand = c(.05, .05), labels = c("ethnicity_new_5" = "Primary Care ethnicity", "ethnicity_sus_5" = "Secondary Care ethnicity"), position = "top") + + scale_fill_manual(values = rev(c("#FFD23B", "#808080", "#FF7C00", "#5323B3", "#5A71F3", "#17D7E6")), na.value = NA) + + #theme_minimal() + + ggtitle("") + + theme( + axis.title.y = element_blank(), + axis.text.y = element_blank(), + axis.ticks.y = element_blank(), + axis.text.x = element_text(size = 20) + ) + + theme( + panel.background = element_rect(fill = "black"), + panel.grid.major = element_blank(), + panel.grid.minor = element_blank() + ) + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + glue("secondary_care_alluvial_disc.png") + ), + alluvial_disc, + dpi = 600, + width = 25, + height = 30, + units = "cm" +) + +##### only discrepancy alluvial CTV3 +df_sus_new_cross_ctv3 <- read_csv(here::here("output", "released", "simple_ctv3_sus_crosstab_long_registered.csv")) + +df_secondary_new_cross_ctv3_perc <- df_sus_new_cross_ctv3 %>% + mutate(ethnicity_5_na = case_when(ethnicity_5!="Unknown" & ethnicity_sus_5 !="Unknown" & ethnicity_5!=ethnicity_sus_5~ethnicity_5), + ethnicity_5_na = fct_relevel( + ethnicity_5_na, + "Unknown", "Other", "White", "Mixed", "Black","Asian" + ), + ethnicity_5 = fct_relevel( + ethnicity_5, + "Unknown", "Other", "White", "Mixed", "Black","Asian" + ), + ethnicity_sus_5 = fct_relevel( + ethnicity_sus_5, + "Asian","Black","Mixed", "White","Other", "Unknown" + ) + ) + + +alluvial_disc_ctv3 <- ggplot( + as.data.frame(df_secondary_new_cross_ctv3_perc), + aes(y = `0`, axis1 = ethnicity_5, axis2 = ethnicity_sus_5) +) + + geom_alluvium(aes(fill = ethnicity_5_na)) + + geom_stratum(aes(fill = ethnicity_sus_5)) + + # geom_text(stat = "stratum", aes(label = after_stat(stratum)), colour = "white",size = 10) + + scale_x_discrete(limits = c("ethnicity_5", "ethnicity_sus_5"), expand = c(.05, .05), labels = c("ethnicity_5" = "Primary Care ethnicity", "ethnicity_sus_5" = "Secondary Care ethnicity"), position = "top") + + scale_fill_manual(values = rev(c("#FFD23B", "#808080", "#FF7C00", "#5323B3", "#5A71F3", "#17D7E6")), na.value = NA) + + #theme_minimal() + + ggtitle("") + + theme( + axis.title.y = element_blank(), + axis.text.y = element_blank(), + axis.ticks.y = element_blank(), + axis.text.x = element_text(size = 20) + ) + + theme( + panel.background = element_rect(fill = "black"), + panel.grid.major = element_blank(), + panel.grid.minor = element_blank() + ) + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + glue("secondary_care_alluvial_ctv3_disc.png") + ), + alluvial_disc_ctv3, + dpi = 600, + width = 25, + height = 30, + units = "cm" +) + + +#### percentage discordant +snomed_popn<-df_secondary_new_cross_perc %>% + filter(ethnicity_sus_5!="Unknown") %>% + group_by(ethnicity_new_5) %>% + summarise(total = sum(`0`)) + +snomed_disc<-df_secondary_new_cross_perc %>% + filter(ethnicity_sus_5=="Asian", + ethnicity_new_5=="Other") %>% + group_by(ethnicity_new_5) %>% + summarise(total_disc = sum(`0`)) %>% + inner_join(snomed_popn,join_by(ethnicity_new_5==ethnicity_new_5)) %>% + mutate(perc = total_disc / total *100 ) + +snomed_popn_ctv3<-df_secondary_new_cross_ctv3_perc %>% + filter(ethnicity_sus_5!="Unknown") %>% + group_by(ethnicity_5) %>% + summarise(total = sum(`0`)) + +snomed_disc_ctv3<-df_secondary_new_cross_ctv3_perc %>% + filter(ethnicity_sus_5=="Asian", + ethnicity_5=="Other") %>% + group_by(ethnicity_5) %>% + summarise(total_disc = sum(`0`)) %>% + inner_join(snomed_popn_ctv3,join_by(ethnicity_5==ethnicity_5)) %>% + mutate(perc = total_disc / total *100 ) + + + +###### + +secondary_heat_perc_all_patients <- ggplot(df_secondary_new_cross_perc, aes(ethnicity_sus_5, ethnicity_new_5, fill = percentage)) + + geom_tile() + + # scale_fill_viridis(discrete=FALSE,direction=-1) + + # scale_fill_gradient(low="white", high="blue") + + scale_fill_distiller(palette = "OrRd", direction = 1, name = "Proportion of all TPP patients") + + geom_text(aes(label = percentage)) + + ylab("Primary care ethnicity\n") + + xlab("\nSecondary Care ethnicity") + + theme_ipsum() + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + "second_care_all_pts.png" + ), + secondary_heat_perc_all_patients, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + + +############ state change + +# data<-read_feather(here::here("output","data","input.feather")) +state_change <- read_csv(here::here("output", "released", "simple_state_change_ethnicity_new_5_registered.csv"), col_types = (cols())) %>% + select(-...1) %>% + rename("latest" = "ethnicity_new_5") + +state_change_long <- state_change %>% + pivot_longer( + cols = starts_with("ethnicity_new_5"), + names_prefix = "ethnicity_new_5_", + names_to = "ethnicity", + values_to = "val" + ) %>% + mutate( + percentage = round(val / n * 100, 1), + ethnicity = str_to_title(ethnicity), + ethnicity = case_when( + ethnicity == "Any" ~ "Any discordant ethnicity", + T ~ ethnicity + ), + latest = fct_relevel( + latest, + "Other", "White", "Mixed", "Black", "Asian" + ), + ethnicity = fct_relevel( + ethnicity, + "Asian", "Black", "Mixed", "White", "Other", "Any discordant ethnicity" + ) + ) + + + + +plot_state_change <- ggplot(state_change_long, aes(ethnicity, latest, fill = percentage)) + + geom_tile() + + # scale_fill_viridis(discrete=FALSE,direction=-1) + + # scale_fill_gradient(low="white", high="blue") + + scale_fill_distiller(palette = "OrRd", direction = 1, name = "Proportion of 'Latest Ethnicity'") + + geom_text(aes(label = percentage)) + + ylab("Latest recorded ethnicity\n") + + xlab("\nAny recorded ethnicity") + + theme_ipsum() + +plot_state_change + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + "state_change.png" + ), + plot_state_change, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + +ggplot(state_change_long %>% filter(as.character(ethnicity) != as.character(latest)), aes(fill = ethnicity, y = percentage, x = latest)) + + geom_bar(position = "stack", stat = "identity") + +### latest common 2023 +df_lat_comm <- read_csv(here::here("output", "released", "simple_latest_common_ethnicity_new_5_registered.csv")) + +df_lat_comm <- df_lat_comm %>% + ungroup() %>% + # mutate(across(-1)/rowSums(across(-1),na.rm = T)*100) %>% + mutate(latest = ethnicity_new_5) %>% + select(-ethnicity_new_5) %>% + pivot_longer(cols = starts_with("ethnicity_new_5"), names_prefix = "ethnicity_new_5_", names_to = "common", values_to = "val") %>% + mutate( + common = str_to_title(common), + common = fct_relevel( + common, + "Asian", "Black", "Mixed", "White", "Other" + ), + latest = fct_relevel( + latest, + "Other", "White", "Mixed", "Black", "Asian" + ) + ) %>% + filter(latest != "Unknown") +# filter(latest!="White_British",latest!="White_Irish",latest!="Other_White",common!="White_British",common!="White_Irish",common!="Other_White") + + +latest_common <- ggplot(df_lat_comm, aes(common, latest, fill = val)) + + geom_tile() + + # scale_fill_viridis(discrete=FALSE,direction=-1) + + # scale_fill_gradient(low="white", high="blue") + + scale_fill_distiller(palette = "OrRd", direction = 1, name = "Proportion of 'Latest Ethnicity'") + + geom_text(aes(label = round(val, 1))) + + ylab("Latest Ethnicity\n") + + xlab("\nMost Frequent Ethnicity") + + theme_ipsum() + +latest_common + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + "latest_common.png" + ), + latest_common, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + + +alluvial_frequent <- ggplot( + as.data.frame(df_lat_comm), + aes(y = val, axis1 = latest, axis2 = common) +) + + geom_alluvium(aes(fill = latest)) + + geom_stratum(aes(fill = common)) + + scale_x_discrete(limits = c("latest", "common"), expand = c(.05, .05), labels = c("latest" = "Latest recorded ethnicity", "common" = "Most frequently recorded ethnicity"), position = "top") + + scale_fill_manual(values = rev(c("#FFD23B", "#FF7C00", "#5323B3", "#5A71F3", "#17D7E6")), na.value = NA) + + # theme_minimal() + + ggtitle("") + + theme( + axis.title.y = element_blank(), + axis.text.y = element_blank(), + axis.ticks.y = element_blank(), + axis.text.x = element_text(size = 20) + ) + + theme( + panel.grid.major = element_blank(), + panel.grid.minor = element_blank() + ) + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_label_repel(stat = "stratum", + aes(label = after_stat(stratum), + fill = after_stat(stratum)), + colour = "white", + size = 10, + fontface = 'bold', + direction = "x", + show.legend = F) + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + glue("Frequent_care_alluvial.png") + ), + alluvial_frequent, + dpi = 600, + width = 50, + height = 30, + units = "cm" +) + + +### ONS comparison +####### NA removed +# read ethnicity produced by combine_ONS_sus.R +ons_na_removed <- + read_csv(here::here("output", "released", "made_locally", "ethnic_group_2021_registered_with_2001_categories.csv")) %>% + mutate( + cohort = case_when( + cohort == "ONS" ~ "2021 Census\n[amended to 2001 grouping]", + cohort == "new" ~ "SNOMED:2022", + cohort == "supplemented" ~ "SNOMED:2022 supplemented with SUS data" + ), + cohort = fct_relevel(cohort, "2021 Census\n[amended to 2001 grouping]", "SNOMED:2022", "SNOMED:2022 supplemented with SUS data"), + Ethnic_Group = fct_relevel( + Ethnic_Group, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + + +## create difference in percentage between ONS and TPP (for plotting) +ons_ethnicity_plot_na_diff <- ons_na_removed %>% + group_by(Ethnic_Group, region, group) %>% + arrange(cohort) %>% + mutate(diff = percentage - first(percentage)) %>% + select(region, Ethnic_Group, cohort, diff, group) + +ons_na_removed <- ons_na_removed %>% + left_join(ons_ethnicity_plot_na_diff, by = c("region", "Ethnic_Group", "cohort", "group")) +## 5 group ethnicity plot NA removed for Regions +ons_ethnicity_plot_na <- ons_na_removed %>% + filter(region != "England", group == "5") %>% + ggplot(aes(x = Ethnic_Group, y = percentage, fill = cohort)) + + geom_bar(stat = "identity", position = "dodge") + + facet_wrap(~region) + + theme_classic() + + theme(text = element_text(size = 20)) + + theme(axis.text.x = element_text( + size = 12, + hjust = 0.75, + vjust = 0 + )) + + coord_flip() + + scale_fill_manual(values = c("#00468BFF", "#ED0000FF", "#925E9FFF")) + + xlab("") + + ylab("\nProportion of ethnicities") + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_text(aes(x = Ethnic_Group, y = percentage, label = ifelse(cohort == "2021 Census\n[amended to 2001 grouping]", "", paste0(round(diff, digits = 1), "%"))), size = 3.4, position = position_dodge(width = 0.9), vjust = 0.3, hjust = -0.2) + + +ggsave( + filename = here::here("output", "released", "made_locally", "ONS_ethnicity_regions_2021_with_2001_regions.png"), + ons_ethnicity_plot_na, + dpi = 600, + width = 50, + height = 30, + units = "cm" +) + + +## 5 group ethnicity plot NA removed for England +ons_ethnicity_plot_eng_na <- ons_na_removed %>% + filter(region == "England", group == "5") %>% + ggplot(aes(x = Ethnic_Group, y = percentage, fill = cohort)) + + geom_bar(stat = "identity", position = "dodge") + + theme_classic() + + theme(text = element_text(size = 20)) + + theme(axis.text.x = element_text( + size = 20, + hjust = 0, + vjust = 0 + )) + + coord_flip() + + scale_fill_manual(values = c("#00468BFF", "#ED0000FF", "#925E9FFF")) + + xlab("") + + ylab("\nProportion of ethnicities") + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_text(aes(x = Ethnic_Group, y = percentage, label = ifelse(cohort == "2021 Census\n[amended to 2001 grouping]", "", paste0(round(diff, digits = 1), "%"))), size = 3.4, position = position_dodge(width = 0.9), vjust = 0.3, hjust = -0.2) + +ggsave( + filename = here::here("output", "released", "made_locally", "ONS_ethnicity_eng_2021_with_2001_regions.png"), + ons_ethnicity_plot_eng_na, + dpi = 600, + width = 30, + height = 15, + units = "cm" +) + + + +#### in progress +library(ggpattern) + +ggplot(df_sus_new_cross_perc, aes(ethnicity_sus_5, ethnicity_sus_5)) + + geom_bar(stat = "identity", aes(width = population, fill = ethnicity_new_5), col = "Black") + + geom_text(aes(label = as.character(var1), x = var1Center, y = 1.05)) + + +df_sus_new_cross_perc_1 <- df_sus_new_cross_perc %>% + mutate( + highlight = case_when( + ethnicity_sus_5 == ethnicity_new_5 ~ "yes", + TRUE ~ "no" + ), + type = case_when( + ethnicity_new_5 == "White" ~ "yes", + TRUE ~ "no" + ), + ethnicity_new_5 = fct_relevel( + ethnicity_new_5, + "Asian", "Black", "Mixed", "White", "Other", "Unknown" + ) + ) + + +strip <- strip_themed(background_x = elem_list_rect(fill = rev(c("#80796BFF", "#374E55FF", "#6A6599FF", "#B24745FF", "#00A1D5FF")))) + +marimekko_nw <- ggplot( + df_sus_new_cross_perc_1 %>% filter(ethnicity_new_5 != "White"), + aes(x = ethnicity_new_5, y = percentage, width = population, fill = ethnicity_sus_5, alpha = highlight, colour = highlight) +) + + geom_bar(stat = "identity", position = "fill") + + scale_color_manual(values = c("yes" = "black", "no" = "white"), guide = "none") + + scale_alpha_discrete(range = c(0.8, 0.9)) + + geom_label_repel(aes(label = round(percentage, 1)), position = position_fill(vjust = 0.5), direction = "x", size = 8 / .pt, show.legend = FALSE) + # if labels are desired + facet_grid2(type ~ ethnicity_new_5, scales = "fixed", space = "fixed", strip = strip) + + scale_fill_manual(values = rev(c("#80796BFF", "#374E55FF", "#DF8F44FF", "#6A6599FF", "#B24745FF", "#00A1D5FF")), guide = "none") + + # theme(panel.spacing.x = unit(0, "npc")) + # if no spacing preferred between bars + theme_void() + + theme( + strip.text.y = element_blank() + ) + + scale_x_discrete( + expand = expansion(add = 0.5) + ) + + theme(panel.spacing = unit(0.1, "lines")) + + theme( + strip.background = element_rect( + color = "black", fill = , linetype = "solid" + ) + ) + + guides(fill = guide_legend(""), alpha = "none", colour = "none") + +strip_white <- strip_themed(background_x = elem_list_rect(fill = c("#DF8F44FF"))) + +marimekko_white <- ggplot( + df_sus_new_cross_perc_1 %>% filter(ethnicity_new_5 == "White"), + aes(x = ethnicity_new_5, y = percentage, width = population, fill = ethnicity_sus_5, alpha = highlight, colour = highlight) +) + + geom_bar(stat = "identity", position = "fill") + + scale_color_manual(values = c("yes" = "black", "no" = "white"), guide = "none") + + scale_alpha_discrete(range = c(0.8, 0.9)) + + geom_label_repel(aes(label = round(percentage, 1)), position = position_fill(vjust = 0.5), direction = "x", size = 8 / .pt, show.legend = FALSE) + # if labels are desired + facet_grid2(type ~ ethnicity_new_5, scales = "fixed", space = "fixed", strip = strip_white) + + scale_fill_manual(values = rev(c("#80796BFF", "#374E55FF", "#DF8F44FF", "#6A6599FF", "#B24745FF", "#00A1D5FF")), guide = T) + + # theme(panel.spacing.x = unit(0, "npc")) + # if no spacing preferred between bars + theme_void() + + theme( + strip.text.y = element_blank() + ) + + scale_x_discrete( + expand = expansion(add = 0.5) + ) + + theme(panel.spacing = unit(0.1, "lines")) + + guides(fill = guide_legend(""), alpha = "none", colour = "none") + + +marimekko <- ggarrange(marimekko_nw, marimekko_white, nrow = 2, common.legend = TRUE, legend = "bottom") + +ggsave( + filename = here::here( + "output", + "released", + "made_locally", + "marimekko.png" + ), + marimekko, + dpi = 600, + width = 20, + height = 20, + units = "cm" +) + +View(df_sus_new_cross_perc_1) diff --git a/analysis/report_tables.py b/analysis/report_tables.py new file mode 100644 index 0000000..93a2d4d --- /dev/null +++ b/analysis/report_tables.py @@ -0,0 +1,700 @@ +import os +import pandas as pd +from itertools import product +import numpy as np + + +def report_patient_counts( + definitions, + group, + defin, + input_path, + output_path, + code_dict="", + definition_dict="", + categories=False, + missing=False, +): + suffix = "_filled" + overlap = "all_filled" + if missing == True: + suffix = "_missing" + overlap = "all_missing" + if categories: + # df_population = pd.read_csv( + # f"output/{input_path}/simple_patient_counts_registered.csv" + # ).set_index(["group", "subgroup"]) + + df_append = pd.read_csv( + f"output/{input_path}/{group}_group/tables/simple_patient_counts_categories_{group}_group_{defin}_registered.csv" + ).set_index(["group", "subgroup"]) + for col in df_append.columns[df_append.columns.str.endswith("supplemented")]: + df_append = df_append.rename(columns={col: f"{col}_filled"}) + for col in df_append.columns[df_append.columns.str.endswith("any")]: + df_append = df_append.rename(columns={col: f"{col}_filled"}) + + # df_append.drop("population", inplace=True, axis=1) + for definition in definitions: + # df_append[f"population_{definition}"] = df_population[definition+"_filled"] + # ensure definitions[n] in code_dict[definitions[n]] below refers to one of the definitions of interest + full_definitions = [ + f"{category}_{definition}" + for category, definition in product( + code_dict[definitions[1]].values(), [definition] + ) + ] + for full_definition in full_definitions: + if missing: + df_append[full_definition + suffix] = ( + df_append[f"population_{definition}"] + - df_append[full_definition + "_filled"] + ) + df_append[full_definition + "_pct"] = round( + (df_append[full_definition + suffix].div(df_append[f"population"])) + * 100, + 1, + ) + + df_append[overlap + "_pct"] = round( + (df_append[overlap].div(df_append[f"population"])) * 100, 1 + ) + # df_append[full_definition + "_pct"] = round( + # (df_append[full_definition + suffix].div(df_append[f"population_{definition}"])) * 100, 1 + # ) + # df_append[overlap + "_pct"] = round( + # (df_append[overlap].div(df_append[f"population_{definition}"])) * 100, 1 + # ) + # Combine count and percentage columns + df_append[full_definition] = ( + df_append[full_definition + suffix].apply( + lambda x: "{:,.0f}".format(x) + ) + + " (" + + df_append[full_definition + "_pct"].astype(str) + + ")" + ) + df_append = df_append.drop( + columns=[full_definition + suffix, full_definition + "_pct"] + ) + else: + df_append = pd.read_csv( + f"output/{input_path}/{group}_group/tables/simple_patient_counts_{group}_group_{defin}_registered.csv" + ).set_index(["group", "subgroup"]) + for definition in definitions: + if missing: + df_append[definition + suffix] = ( + df_append["population"] - df_append[definition + "_filled"] + ) + df_append[definition + "_pct"] = round( + (df_append[definition + suffix].div(df_append["population"])) * 100, 1 + ) + df_append[overlap + "_pct"] = round( + (df_append[overlap].div(df_append["population"])) * 100, 1 + ) + + for definition in definitions: + # Percentage increase from adding SUS data + df_append[definition + "_pp_inc"] = round( + df_append[definitions[1] + "_pct"] - df_append[definition + "_pct"], 1 + ) + # Combine count and percentage columns + df_append[definition] = ( + df_append[definition + suffix].apply(lambda x: "{:,.0f}".format(x)) + + " (" + + df_append[definition + "_pct"].astype(str) + + ")" + ) + df_append = df_append.drop( + columns=[definition + suffix, definition + "_pct"] + ) + df_append[overlap] = ( + df_append[overlap].apply(lambda x: "{:,.0f}".format(x)) + + " (" + + df_append[overlap + "_pct"].astype(str) + + ")" + ) + df_append = df_append.reset_index() + df_append = df_append.replace("True", "Yes") + df_append = df_append.replace("False", "No") + df_append = df_append.set_index(["group", "subgroup"]) + df_append = df_append.drop(columns=[overlap + "_pct"]) + if categories: + full_definitions = [ + f"{category}_{definition}" + for category, definition in product( + code_dict[definitions[1]].values(), definitions + ) + ] + df_patient_counts = df_append[full_definitions] + else: + df_patient_counts = df_append[ + definitions + [overlap] + ["population"] + [definitions[0] + "_pp_inc"] + ] + # Final redaction step + df_patient_counts = df_patient_counts.replace(np.nan, "-") + df_patient_counts = df_patient_counts.replace("nan (nan)", "- (-)") + + for k, v in definition_dict.items(): + df_patient_counts.columns = df_patient_counts.columns.str.replace(k, v) + df_patient_counts.columns = df_patient_counts.columns.str.replace("_", " ") + + if categories: + df_patient_counts.to_csv( + f"output/{output_path}/report_patient_counts_categories_{group}_{defin}_registered.csv" + ) + print( + f"saved: output/{output_path}/report_patient_counts_categories_{group}_{defin}_registered.csv" + ) + else: + df_patient_counts.to_csv( + f"output/{output_path}/report_patient_counts_{group}_{defin}_registered.csv" + ) + print( + f"saved: output/{output_path}/report_patient_counts_{group}_{defin}_registered.csv" + ) + + +def report_latest_common( + definitions, + input_path, + output_path, + group, + defin, + code_dict="", + definition_dict="", + suffix="", +): + for definition in definitions: + if code_dict != "": + lowerlist_5 = [x.lower() for x in (list(code_dict[definition].values()))] + df_sum = pd.read_csv( + f"output/{input_path}/{group}_group/tables/simple_latest_common_{definition}{suffix}_registered.csv" + ).set_index(definition) + # sort rows by category index + df_sum.columns = df_sum.columns.str.replace(definition + "_", "") + df_sum.columns = df_sum.columns.str.lower() + df_sum = df_sum.reindex(list(code_dict[definition].values())) + df_sum = df_sum[lowerlist_5] + df_counts = pd.DataFrame( + np.diagonal(df_sum), + index=df_sum.index, + columns=[f"matching (n={np.diagonal(df_sum).sum()})"], + ) + + df_sum2 = df_sum.copy(deep=True) + np.fill_diagonal(df_sum2.values, 0) + df_diag = pd.DataFrame( + df_sum2.sum(axis=1), + ) + df_out = df_counts.merge(df_diag, right_index=True, left_index=True) + # columns=round(df_out.sum()/df_out.sum(axis=1).sum()*100,1) + + df_out.loc["Total"] = df_out.sum() + df_out.columns = [f"matching", f"not matching"] + df_out["matching_pct"] = round( + df_out["matching"] + / (df_out[["matching", "not matching"]].sum(axis=1)) + * 100, + 1, + ) + df_out["not matching_pct"] = round( + df_out["not matching"] + / (df_out[["matching", "not matching"]].sum(axis=1)) + * 100, + 1, + ) + for item in ["matching", "not matching"]: + df_out[item] = ( + df_out[item].apply(lambda x: "{:,.0f}".format(x)) + + " (" + + df_out[item + "_pct"].astype(str) + + ")" + ) + df_out = df_out[["matching", "not matching"]] + df_out = df_out.reset_index() + df_out = df_out.rename(definition_dict, axis="columns") + df_out.rename( + columns={ + f"{definition_dict[definition]}": f"Latest Ethnicity-\n{definition_dict[definition]}" + }, + inplace=True, + ) + df_out = df_out.set_index(f"Latest Ethnicity-\n{definition_dict[definition]}") + df_out = df_out.replace(np.nan, "-") + df_out.to_csv( + f"output/{output_path}/report_latest_common_{definition}_registered.csv" + ) + + if code_dict != "": + lowerlist_5 = [x.lower() for x in (list(code_dict[definition].values()))] + df_sum = df_sum[lowerlist_5] + else: + df_sum = df_sum.reindex(sorted(df_sum.columns), axis=1) + + # Combine count and percentage columns + df_sum["population"] = df_sum.sum(axis=1) + for item in lowerlist_5: + df_sum[item + "_pct"] = round( + (df_sum[item].div(df_sum["population"])) * 100, 1 + ) + df_sum[item] = ( + df_sum[item].apply(lambda x: "{:,.0f}".format(x)) + + " (" + + df_sum[item + "_pct"].astype(str) + + ")" + ) + df_sum = df_sum[lowerlist_5] + df_sum = df_sum.reset_index() + df_sum = df_sum.replace("nan (nan)", "- (-)") + df_sum = df_sum.rename(definition_dict, axis="columns") + df_sum.rename( + columns={ + f"{definition_dict[definition]}": f"Latest Ethnicity-\n{definition_dict[definition]}" + }, + inplace=True, + ) + df_sum = df_sum.set_index(f"Latest Ethnicity-\n{definition_dict[definition]}") + df_sum.to_csv( + f"output/{output_path}/report_latest_common_{defin}_{group}_expanded_registered.csv" + ) + + +def report_state_change( + definitions, + input_path, + output_path, + group, + defin, + code_dict="", + definition_dict="", +): + for definition in definitions: + lowerlist = [x.lower() for x in (list(code_dict[definition].values()))] + df_state_change = pd.read_csv( + f"output/{input_path}/{group}_group/tables/simple_state_change_{definition}_registered.csv" + ).set_index(definition) + df_state_change.columns = df_state_change.columns.str.replace( + definition + "_", "" + ) + # resort rows + df_state_change = df_state_change.reindex(list(code_dict[definition].values())) + df_state_change = df_state_change.reset_index() + + df_state_change[definition] = ( + df_state_change[definition] + + ": " + + df_state_change["n"].apply(lambda x: "{:,.0f}".format(x)) + ) + df_state_change = df_state_change.set_index(definition) + df_state_change.columns = map(str.lower, df_state_change.columns) + + for item in lowerlist + list(["any"]): + df_state_change[item + "_pct"] = round( + (df_state_change[item].div(df_state_change["n"])) * 100, 1 + ) + + df_state_change[item] = ( + df_state_change[item].apply(lambda x: "{:,.0f}".format(x)) + + " (" + + df_state_change[item + "_pct"].astype(str) + + ")" + ) + df_state_change = df_state_change[lowerlist + list(["any"])] + df_state_change = df_state_change.replace("nan (nan)", "- (-)") + df_state_change = df_state_change.reset_index() + df_state_change = df_state_change.rename(definition_dict, axis="columns") + df_state_change.rename( + columns={ + f"{definition_dict[definition]}": f"Latest Ethnicity-\n{definition_dict[definition]}" + }, + inplace=True, + ) + df_state_change = df_state_change.set_index( + f"Latest Ethnicity-\n{definition_dict[definition]}" + ) + df_state_change.to_csv( + f"output/{output_path}/report_state_change_{defin}_{group}_registered.csv" + ) + + +### CONFIGURE ### +definitions_5 = ["ethnicity_new_5", "ethnicity_5"] +definitions_16 = ["ethnicity_new_16", "ethnicity_16"] +definitions_sus_5 = ["ethnicity_new_5", "any"] +definitions_sus_5_ctv3 = ["ethnicity_5", "any"] +definitions_sus_16 = ["ethnicity_new_16", "any"] +definitions_sus_16_ctv3 = ["ethnicity_16", "any"] +definitions_supplemented_ctv3_5 = ["ethnicity_5", "supplemented"] +definitions_supplemented_5 = ["ethnicity_new_5", "supplemented"] +definitions_supplemented_16 = ["ethnicity_new_16", "supplemented"] +definitions_supplemented_ctv3_16 = ["ethnicity_16", "supplemented"] +covariates = [ + "_age_band", + "_sex", + "_region", + "_imd", + "_dementia", + "_diabetes", + "_hypertension", + "_learning_disability", +] +input_path_sus = "sus/simplified_output" +input_path_new = "simplified_output" +# output_path_16 = 'from_jobserver/released +suffixes = ["", "_missing"] +suffix = "" +code_dict_5 = { + "imd": { + 0: "Unknown", + 1: "1 Most deprived", + 2: "2", + 3: "3", + 4: "4", + 5: "5 Least deprived", + }, + "any": {1: "Asian", 2: "Black", 3: "Mixed", 4: "White", 5: "Other"}, + "supplemented": {1: "Asian", 2: "Black", 3: "Mixed", 4: "White", 5: "Other"}, + "ethnicity_new_5": {1: "Asian", 2: "Black", 3: "Mixed", 4: "White", 5: "Other"}, + "ethnicity_5": {1: "Asian", 2: "Black", 3: "Mixed", 4: "White", 5: "Other"}, + "ethnicity_primis_5": {1: "Asian", 2: "Black", 3: "Mixed", 4: "White", 5: "Other"}, +} +lowerlist_5 = [x.lower() for x in (list(code_dict_5["ethnicity_new_5"].values()))] +# Code dictionary +code_dict_16 = { + "imd": { + 0: "Unknown", + 1: "1 Most deprived", + 2: "2", + 3: "3", + 4: "4", + 5: "5 Least deprived", + }, + "any": { + 1: "Indian", + 2: "Pakistani", + 3: "Bangladeshi", + 4: "Other_Asian", + 5: "Caribbean", + 6: "African", + 7: "Other_Black", + 8: "White_and_Black_Caribbean", + 9: "White_and_Black_African", + 10: "White_and_Asian", + 11: "Other_Mixed", + 12: "White_British", + 13: "White_Irish", + 14: "Other_White", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, + "supplemented": { + 1: "Indian", + 2: "Pakistani", + 3: "Bangladeshi", + 4: "Other_Asian", + 5: "Caribbean", + 6: "African", + 7: "Other_Black", + 8: "White_and_Black_Caribbean", + 9: "White_and_Black_African", + 10: "White_and_Asian", + 11: "Other_Mixed", + 12: "White_British", + 13: "White_Irish", + 14: "Other_White", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, + "ethnicity_16": { + 1: "Indian", + 2: "Pakistani", + 3: "Bangladeshi", + 4: "Other_Asian", + 5: "Caribbean", + 6: "African", + 7: "Other_Black", + 8: "White_and_Black_Caribbean", + 9: "White_and_Black_African", + 10: "White_and_Asian", + 11: "Other_Mixed", + 12: "White_British", + 13: "White_Irish", + 14: "Other_White", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, + "ethnicity_new_16": { + 1: "Indian", + 2: "Pakistani", + 3: "Bangladeshi", + 4: "Other_Asian", + 5: "Caribbean", + 6: "African", + 7: "Other_Black", + 8: "White_and_Black_Caribbean", + 9: "White_and_Black_African", + 10: "White_and_Asian", + 11: "Other_Mixed", + 12: "White_British", + 13: "White_Irish", + 14: "Other_White", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, + "ethnicity_primis_16": { + 1: "Indian", + 2: "Pakistani", + 3: "Bangladeshi", + 4: "Other_Asian", + 5: "Caribbean", + 6: "African", + 7: "Other_Black", + 8: "White_and_Black_Caribbean", + 9: "White_and_Black_African", + 10: "White_and_Asian", + 11: "Other_Mixed", + 12: "White_British", + 13: "White_Irish", + 14: "Other_White", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, +} +definition_dict_new_ctv3 = { + "ethnicity_new_5": "5 SNOMED:2022", + "ethnicity_primis_5": "5 PRIMIS:2021", + "ethnicity_5": "5 CTV3:2020", + "ethnicity_new_16": "16 SNOMED:2022", + "ethnicity_primis_16": "16 PRIMIS:2021", + "ethnicity_16": "16 CTV3:2020", + "any": "Both CTV3 and Snomed", + "supplemented": "Both CTV3 and Snomed", +} +definition_dict_new = { + "ethnicity_new_5": "5 SNOMED:2022", + "ethnicity_primis_5": "5 PRIMIS:2021", + "ethnicity_5": "5 CTV3:2020", + "ethnicity_new_16": "16 SNOMED:2022", + "ethnicity_primis_16": "16 PRIMIS:2021", + "ethnicity_16": "16 CTV3:2020", + "any": "SNOMED:2022 Supplemented", + "supplemented": "SNOMED:2022 Supplemented", +} + +definition_dict_ctv3 = { + "ethnicity_new_5": "5 SNOMED:2022", + "ethnicity_primis_5": "5 PRIMIS:2021", + "ethnicity_5": "5 CTV3:2020", + "ethnicity_new_16": "16 SNOMED:2022", + "ethnicity_primis_16": "16 PRIMIS:2021", + "ethnicity_16": "16 CTV3:2020", + "any": "CTV3 Supplemented", + "supplemented": "CTV3 Supplemented", +} + +output_path = f"report_tables" +group_5 = "5" +group_16 = "16" + +exists = os.path.exists(f"output/{output_path}") +if not exists: + os.makedirs(f"output/{output_path}") + + +def main(): + report_patient_counts( + definitions_sus_5, + group_5, + "new_sus", + input_path_sus, + output_path, + code_dict_5, + definition_dict_new, + categories=False, + missing=False, + ) + report_patient_counts( + definitions_sus_5, + group_5, + "new_sus", + input_path_sus, + output_path, + code_dict_5, + definition_dict_new, + categories=True, + missing=False, + ) + report_patient_counts( + definitions_sus_5_ctv3, + group_5, + "ctv3_sus", + input_path_sus, + output_path, + code_dict_5, + definition_dict_ctv3, + categories=False, + missing=False, + ) + report_patient_counts( + definitions_5, + group_5, + "new_ctv3", + input_path_new, + output_path, + code_dict_5, + definition_dict_new_ctv3, + categories=False, + missing=False, + ) + report_patient_counts( + definitions_supplemented_ctv3_5, + group_5, + "ctv3_sus", + input_path_sus, + output_path, + code_dict_5, + definition_dict_ctv3, + categories=True, + missing=False, + ) + + #### 16 group + report_patient_counts( + definitions_sus_16, + group_16, + "new_sus", + input_path_sus, + output_path, + code_dict_16, + definition_dict_new, + categories=False, + missing=False, + ) + report_patient_counts( + definitions_sus_16_ctv3, + group_16, + "ctv3_sus", + input_path_sus, + output_path, + code_dict_16, + definition_dict_ctv3, + categories=False, + missing=False, + ) + report_patient_counts( + definitions_16, + group_16, + "new_ctv3", + input_path_new, + output_path, + code_dict_16, + definition_dict_new_ctv3, + categories=False, + missing=False, + ) + report_patient_counts( + definitions_supplemented_ctv3_16, + group_16, + "ctv3_sus", + input_path_sus, + output_path, + code_dict_16, + definition_dict_ctv3, + categories=True, + missing=False, + ) + + report_patient_counts( + definitions_supplemented_16, + group_16, + "new_sus", + input_path_sus, + output_path, + code_dict_16, + definition_dict_new, + categories=True, + missing=False, + ) + # Most recent vs most common + report_latest_common( + ["ethnicity_new_5"], + input_path_new, + output_path, + group_5, + "new", + code_dict_5, + definition_dict_new, + suffix, + ) + report_latest_common( + ["ethnicity_new_16"], + input_path_new, + output_path, + group_16, + "new", + code_dict_16, + definition_dict_new, + suffix, + ) + report_latest_common( + ["ethnicity_5"], + input_path_new, + output_path, + group_5, + "ctv3", + code_dict_5, + definition_dict_ctv3, + suffix, + ) + report_latest_common( + ["ethnicity_16"], + input_path_new, + output_path, + group_16, + "ctv3", + code_dict_16, + definition_dict_ctv3, + suffix, + ) + # Most recent vs any + report_state_change( + ["ethnicity_new_5"], + input_path_new, + output_path, + group_5, + "new", + code_dict_5, + definition_dict_new, + ) + report_state_change( + ["ethnicity_new_16"], + input_path_new, + output_path, + group_16, + "new", + code_dict_16, + definition_dict_new, + ) + report_state_change( + ["ethnicity_5"], + input_path_new, + output_path, + group_5, + "ctv3", + code_dict_5, + definition_dict_new, + ) + report_state_change( + ["ethnicity_16"], + input_path_new, + output_path, + group_16, + "ctv3", + code_dict_16, + definition_dict_new, + ) + + +########################## DO NOT EDIT – RUNS SCRIPT ############################## +if __name__ == "__main__": + main() diff --git a/analysis/simple_validation_script.py b/analysis/simple_validation_script.py new file mode 100644 index 0000000..09c3767 --- /dev/null +++ b/analysis/simple_validation_script.py @@ -0,0 +1,171 @@ +from lib_phenotype_validation import * + +############################ CONFIGURE OPTIONS HERE ################################ + +# Import file +input_path = "output/extract_5/input_5.feather" + +# Definitions +definitions = ["ethnicity_5", "ethnicity_new_5"] + +definitions_sus = [ + "ethnicity_new_5", + "ethnicity_sus_5", +] + + +# Code dictionary +code_dict = { + "imd": { + 0: "Unknown", + 1: "1 Most deprived", + 2: "2", + 3: "3", + 4: "4", + 5: "5 Least deprived", + }, + "ethnicity_5": {1: "White", 2: "Mixed", 3: "Asian", 4: "Black", 5: "Other"}, + "ethnicity_new_5": {1: "White", 2: "Mixed", 3: "Asian", 4: "Black", 5: "Other"}, + "ethnicity_primis_5": {1: "White", 2: "Mixed", 3: "Asian", 4: "Black", 5: "Other"}, + "ethnicity_sus_5": {1: "White", 2: "Mixed", 3: "Asian", 4: "Black", 5: "Other"}, +} + +# Other variables to include +other_vars = ["asian", "black", "mixed", "white", "other"] +other_vars_combined = [x + "_" + y for x in definitions for y in other_vars] + +# Restrict to registered as of index date +registered = True +reg = "fullset" +if registered == True: + reg = "registered" + +# Dates +dates = True +date_min = "" +date_max = "" +time_delta = "" + +# Min/max range +min_range = 4 +max_range = 200 + +# Null value – could be multiple values in a list [0,'0',NA] +null = [0, "0"] + +# Covariates +demographic_covariates = ["age_band", "sex", "region", "imd"] +clinical_covariates = ["dementia", "diabetes", "hypertension", "learning_disability"] + +# Output filepath +output_path = "simplified_output" +grouping = "5_group" + +########################## SPECIFY ANALYSES TO RUN HERE ############################## + + +def main(): + # combine defintions and other_vars + df_clean = import_clean( + input_path, + definitions, + other_vars_combined, + demographic_covariates, + clinical_covariates, + reg, + null, + date_min, + date_max, + time_delta, + output_path, + grouping, + code_dict, + dates=False, + registered=registered, + dates_check=True, + ) + # Count patients with records + simple_patient_counts( + df_clean, + definitions, + reg, + "new_ctv3", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + ) + + # Count patients by categories + simple_patient_counts( + df_clean, + definitions, + reg, + "new_ctv3", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + categories=True, + ) + # # Generate upset plot of overlapping definitions + # upset(df_clean_reg, output_path, definitions[1], definitions[0]) + # upset_cat(df_clean, output_path, definitions[1], definitions[0], other_vars) + # Latest v most common + simple_latest_common_comparison( + df_clean, + definitions, + reg, + other_vars_combined, + output_path, + grouping, + code_dict, + ) + # State change + simple_state_change( + df_clean, + definitions, + reg, + other_vars_combined, + output_path, + grouping, + ) + # # records over time + # records_over_time_perc( + # df_clean, definitions, demographic_covariates, clinical_covariates, output_path, "",grouping,reg + # ) + + # df_clean_sus=import_clean_sus( + # input_path, + # definitions_sus, + # other_vars_combined, + # demographic_covariates, + # clinical_covariates, + # reg, + # null, + # date_min, + # date_max, + # time_delta, + # output_path, + # grouping, + # code_dict, + # dates=False, + # registered = registered, + # dates_check=True, + # ) + # # Count patients with records with SUS + # simple_patient_counts_sus( + # df_clean_sus, definitions_sus,reg, demographic_covariates, clinical_covariates, output_path,grouping, + # ) + + +########################## DO NOT EDIT – RUNS SCRIPT ############################## + +if __name__ == "__main__": + main() + +# registered = False +# reg = "fullset" + +# if __name__ == "__main__": +# main() diff --git a/analysis/simple_validation_script_16.py b/analysis/simple_validation_script_16.py new file mode 100644 index 0000000..e76a42b --- /dev/null +++ b/analysis/simple_validation_script_16.py @@ -0,0 +1,213 @@ +from lib_phenotype_validation import * + +############################ CONFIGURE OPTIONS HERE ################################ + +# Import file +input_path = "output/extract_16/input_16.feather" + +# Definitions +definitions = ["ethnicity_16", "ethnicity_new_16"] + +# Code dictionary +code_dict = { + "imd": { + 0: "Unknown", + 1: "1 Most deprived", + 2: "2", + 3: "3", + 4: "4", + 5: "5 Least deprived", + }, + "ethnicity_16": { + 1: "White_British", + 2: "White_Irish", + 3: "Other_White", + 4: "White_and_Black_Caribbean", + 5: "White_and_Black_African", + 6: "White_and_Asian", + 7: "Other_Mixed", + 8: "Indian", + 9: "Pakistani", + 10: "Bangladeshi", + 11: "Other_Asian", + 12: "Caribbean", + 13: "African", + 14: "Other_Black", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, + "ethnicity_new_16": { + 1: "White_British", + 2: "White_Irish", + 3: "Other_White", + 4: "White_and_Black_Caribbean", + 5: "White_and_Black_African", + 6: "White_and_Asian", + 7: "Other_Mixed", + 8: "Indian", + 9: "Pakistani", + 10: "Bangladeshi", + 11: "Other_Asian", + 12: "Caribbean", + 13: "African", + 14: "Other_Black", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, + "ethnicity_primis_16": { + 1: "White_British", + 2: "White_Irish", + 3: "Other_White", + 4: "White_and_Black_Caribbean", + 5: "White_and_Black_African", + 6: "White_and_Asian", + 7: "Other_Mixed", + 8: "Indian", + 9: "Pakistani", + 10: "Bangladeshi", + 11: "Other_Asian", + 12: "Caribbean", + 13: "African", + 14: "Other_Black", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, +} + + +# Other variables to include +other_vars = [ + "Indian", + "Pakistani", + "Bangladeshi", + "Other_Asian", + "Caribbean", + "African", + "Other_Black", + "White_and_Black_Caribbean", + "White_and_Black_African", + "White_and_Asian", + "Other_Mixed", + "White_British", + "White_Irish", + "Other_White", + "Chinese", + "Any_other_ethnic_group", +] +other_vars_combined = [x + "_" + y for x in definitions for y in other_vars] + + +# Restrict to registered as of index date +registered = True +reg = "fullset" +if registered == True: + reg = "registered" + +# Dates +dates = True +date_min = "" +date_max = "" +time_delta = "" + +# Min/max range +min_range = 4 +max_range = 200 + +# Null value – could be multiple values in a list [0,'0',NA] +null = [0, "0"] + +# Covariates +demographic_covariates = ["age_band", "sex", "region", "imd"] +clinical_covariates = ["dementia", "diabetes", "hypertension", "learning_disability"] + +# Output filepath +output_path = "simplified_output" +grouping = "16_group" + +########################## SPECIFY ANALYSES TO RUN HERE ############################## + + +def main(): + # combine defintions and other_vars + df_clean = import_clean( + input_path, + definitions, + other_vars_combined, + demographic_covariates, + clinical_covariates, + reg, + null, + date_min, + date_max, + time_delta, + output_path, + grouping, + code_dict, + dates=False, + registered=registered, + dates_check=False, + ) + # Count patients with records + simple_patient_counts( + df_clean, + definitions, + reg, + "new_ctv3", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + ) + + # Count patients by categories + simple_patient_counts( + df_clean, + definitions, + reg, + "new_ctv3", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + categories=True, + ) + # # Generate upset plot of overlapping definitions + # upset(df_clean_reg, output_path, definitions[1], definitions[0]) + # upset_cat(df_clean, output_path, definitions[1], definitions[0], other_vars) + # Latest v most common + simple_latest_common_comparison( + df_clean, + definitions, + reg, + other_vars_combined, + output_path, + grouping, + code_dict, + ) + + # State change + simple_state_change( + df_clean, + definitions, + reg, + other_vars_combined, + output_path, + grouping, + ) + + # # records over time + # records_over_time_perc( + # df_clean, definitions, demographic_covariates, clinical_covariates, output_path, "",grouping,reg + # ) + + +########################## DO NOT EDIT – RUNS SCRIPT ############################## + +if __name__ == "__main__": + main() + +# registered = False +# reg = "fullset" + +# if __name__ == "__main__": +# main() diff --git a/analysis/study_definition.py b/analysis/study_definition.py deleted file mode 100644 index 262c760..0000000 --- a/analysis/study_definition.py +++ /dev/null @@ -1,94 +0,0 @@ -from cohortextractor import ( - StudyDefinition, - Measure, - patients, - codelist, - combine_codelists, - codelist_from_csv, -) - -from codelists import * - -def make_variable(code): - return { - f"eth_{code}": ( - patients.with_these_clinical_events( - codelist([code], system="snomed"), - on_or_after="2010-01-01", - returning="number_of_matches_in_period", - include_date_of_match=False, - date_format="YYYY-MM-DD", - return_expectations={ - "incidence": 0.1, - "int": {"distribution": "normal", "mean": 3, "stddev": 1}, - }, - ) - ) - } - - -def loop_over_codes(code_list): - variables = {} - for code in code_list: - variables.update(make_variable(code)) - return variables - - -## STUDY POPULATION - - -## STUDY POPULATION -# Defines both the study population and points to the important covariates - -study = StudyDefinition( - default_expectations={ - "date": {"earliest": "1970-01-01", "latest": "today"}, - "rate": "uniform", - "incidence": 0.2, - }, - - # STUDY POPULATION - population=patients.registered_with_one_practice_between("2021-07-01","2021-07-01"), - - ## DEMOGRAPHIC COVARIATES - # AGE - age=patients.age_as_of( - "2021-07-01", - return_expectations={ - "rate": "universal", - "int": {"distribution": "population_ages"}, - }, - ), - - # SEX - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } - ), - - ethnicity=patients.with_these_clinical_events( - group1, - return_expectations={"incidence": 0.50}, - ), - - **loop_over_codes(group1), - first_ethnicity_code=patients.with_these_clinical_events( - group1, - returning="code", - find_first_match_in_period=True, - return_expectations={ - "incidence": 0.05, - "category": { - "ratios": { - "1024701000000100": 0.2, - "110751000000108": 0.2, - "110791000000100": 0.3, - "13440006": 0.2, - "14999008": 0.1, - } - }, - }, - ), -) \ No newline at end of file diff --git a/analysis/study_definition_10.py b/analysis/study_definition_10.py deleted file mode 100644 index a49d4bb..0000000 --- a/analysis/study_definition_10.py +++ /dev/null @@ -1,94 +0,0 @@ -from cohortextractor import ( - StudyDefinition, - Measure, - patients, - codelist, - combine_codelists, - codelist_from_csv, -) - -from codelists import * - -def make_variable(code): - return { - f"eth_{code}": ( - patients.with_these_clinical_events( - codelist([code], system="snomed"), - on_or_after="2010-01-01", - returning="number_of_matches_in_period", - include_date_of_match=False, - date_format="YYYY-MM-DD", - return_expectations={ - "incidence": 0.1, - "int": {"distribution": "normal", "mean": 3, "stddev": 1}, - }, - ) - ) - } - - -def loop_over_codes(code_list): - variables = {} - for code in code_list: - variables.update(make_variable(code)) - return variables - - -## STUDY POPULATION - - -## STUDY POPULATION -# Defines both the study population and points to the important covariates - -study = StudyDefinition( - default_expectations={ - "date": {"earliest": "1970-01-01", "latest": "today"}, - "rate": "uniform", - "incidence": 0.2, - }, - - # STUDY POPULATION - population=patients.registered_with_one_practice_between("2021-07-01","2021-07-01"), - - ## DEMOGRAPHIC COVARIATES - # AGE - age=patients.age_as_of( - "2021-07-01", - return_expectations={ - "rate": "universal", - "int": {"distribution": "population_ages"}, - }, - ), - - # SEX - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } - ), - - ethnicity=patients.with_these_clinical_events( - group10, - return_expectations={"incidence": 0.50}, - ), - - **loop_over_codes(group10), - first_ethnicity_code=patients.with_these_clinical_events( - group10, - returning="code", - find_first_match_in_period=True, - return_expectations={ - "incidence": 0.05, - "category": { - "ratios": { - "1024701000000100": 0.2, - "110751000000108": 0.2, - "110791000000100": 0.3, - "13440006": 0.2, - "14999008": 0.1, - } - }, - }, - ), -) \ No newline at end of file diff --git a/analysis/study_definition_16.py b/analysis/study_definition_16.py new file mode 100644 index 0000000..50e735b --- /dev/null +++ b/analysis/study_definition_16.py @@ -0,0 +1,91 @@ +from cohortextractor import ( + StudyDefinition, + patients, + codelist, + codelist_from_csv, + combine_codelists, +) # NOQA +from create_variables import ( + demographic_variables, + clinical_variables, + ethnicity_16_variables, +) +from codelists import * +from config import * + +definitions = [ + "ethnicity_5", + "ethnicity_new_5", + "ethnicity_primis_5", +] +definitions_16 = [ + "ethnicity_16", + "ethnicity_new_16", + "ethnicity_primis_16", +] +other_vars = ["asian", "black", "mixed", "other", "white"] +other_vars_16 = [ + "White_British", + "White_Irish", + "Other_White", + "White_and_Black_Caribbean", + "White_and_Black_African", + "White_and_Asian", + "Other_Mixed", + "Indian", + "Pakistani", + "Bangladeshi", + "Other_Asian", + "Caribbean", + "African", + "Other_Black", + "Chinese", + "Any_other_ethnic_group", +] + +ethnicity_combinations_5 = [ + f"{definition}_{other_var}" + for definition, other_var in product(definitions, other_vars) +] +ethnicity_combinations_16 = [ + f"{definition}_{other_var}" + for definition, other_var in product(definitions_16, other_vars_16) +] +ethnicity_combinations = ethnicity_combinations_16 + +codelists = { + name: patients.with_these_clinical_events( + globals()[name], + returning="number_of_matches_in_period", + return_expectations={ + "int": {"distribution": "normal", "mean": 6, "stddev": 3}, + "incidence": 0.1, + }, + ) + for name in ethnicity_combinations +} + +study = StudyDefinition( + index_date=index_date, + default_expectations={ + "date": {"earliest": "index_date", "latest": "last_day_of_month(index_date)"}, + "rate": "uniform", + "incidence": 0.65, + }, + population=patients.satisfying( + """ + (sex = "M" OR sex = "F") + """, + ), + # Death date (to censor these patients in longitudinal analyses) + died_date_ons=patients.died_from_any_cause( + between=["2015-01-01", "2021-12-31"], + returning="date_of_death", + date_format="YYYY-MM-DD", + return_expectations={"date": {"earliest": "index_date"}}, + ), + **demographic_variables, + **ethnicity_16_variables, + **clinical_variables, + **codelists, +) diff --git a/analysis/study_definition_2.py b/analysis/study_definition_2.py deleted file mode 100644 index 9b5eabb..0000000 --- a/analysis/study_definition_2.py +++ /dev/null @@ -1,94 +0,0 @@ -from cohortextractor import ( - StudyDefinition, - Measure, - patients, - codelist, - combine_codelists, - codelist_from_csv, -) - -from codelists import * - -def make_variable(code): - return { - f"eth_{code}": ( - patients.with_these_clinical_events( - codelist([code], system="snomed"), - on_or_after="2010-01-01", - returning="number_of_matches_in_period", - include_date_of_match=False, - date_format="YYYY-MM-DD", - return_expectations={ - "incidence": 0.1, - "int": {"distribution": "normal", "mean": 3, "stddev": 1}, - }, - ) - ) - } - - -def loop_over_codes(code_list): - variables = {} - for code in code_list: - variables.update(make_variable(code)) - return variables - - -## STUDY POPULATION - - -## STUDY POPULATION -# Defines both the study population and points to the important covariates - -study = StudyDefinition( - default_expectations={ - "date": {"earliest": "1970-01-01", "latest": "today"}, - "rate": "uniform", - "incidence": 0.2, - }, - - # STUDY POPULATION - population=patients.registered_with_one_practice_between("2021-07-01","2021-07-01"), - - ## DEMOGRAPHIC COVARIATES - # AGE - age=patients.age_as_of( - "2021-07-01", - return_expectations={ - "rate": "universal", - "int": {"distribution": "population_ages"}, - }, - ), - - # SEX - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } - ), - - ethnicity=patients.with_these_clinical_events( - group2, - return_expectations={"incidence": 0.50}, - ), - - **loop_over_codes(group2), - first_ethnicity_code=patients.with_these_clinical_events( - group2, - returning="code", - find_first_match_in_period=True, - return_expectations={ - "incidence": 0.05, - "category": { - "ratios": { - "1024701000000100": 0.2, - "110751000000108": 0.2, - "110791000000100": 0.3, - "13440006": 0.2, - "14999008": 0.1, - } - }, - }, - ), -) \ No newline at end of file diff --git a/analysis/study_definition_3.py b/analysis/study_definition_3.py deleted file mode 100644 index c92c287..0000000 --- a/analysis/study_definition_3.py +++ /dev/null @@ -1,95 +0,0 @@ -from cohortextractor import ( - StudyDefinition, - Measure, - patients, - codelist, - combine_codelists, - codelist_from_csv, -) - -from codelists import * - -def make_variable(code): - return { - f"eth_{code}": ( - patients.with_these_clinical_events( - codelist([code], system="snomed"), - on_or_after="2010-01-01", - returning="number_of_matches_in_period", - include_date_of_match=False, - date_format="YYYY-MM-DD", - return_expectations={ - "incidence": 0.1, - "int": {"distribution": "normal", "mean": 3, "stddev": 1}, - }, - ) - ) - } - - -def loop_over_codes(code_list): - variables = {} - for code in code_list: - variables.update(make_variable(code)) - return variables - - -## STUDY POPULATION - - -## STUDY POPULATION -# Defines both the study population and points to the important covariates - -study = StudyDefinition( - - default_expectations={ - "date": {"earliest": "1970-01-01", "latest": "today"}, - "rate": "uniform", - "incidence": 0.2, - }, - - # STUDY POPULATION - population=patients.registered_with_one_practice_between("2021-07-01","2021-07-01"), - - ## DEMOGRAPHIC COVARIATES - # AGE - age=patients.age_as_of( - "2021-07-01", - return_expectations={ - "rate": "universal", - "int": {"distribution": "population_ages"}, - }, - ), - - # SEX - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } - ), - - ethnicity=patients.with_these_clinical_events( - group3, - return_expectations={"incidence": 0.50}, - ), - - **loop_over_codes(group3), - first_ethnicity_code=patients.with_these_clinical_events( - group3, - returning="code", - find_first_match_in_period=True, - return_expectations={ - "incidence": 0.05, - "category": { - "ratios": { - "1024701000000100": 0.2, - "110751000000108": 0.2, - "110791000000100": 0.3, - "13440006": 0.2, - "14999008": 0.1, - } - }, - }, - ), -) \ No newline at end of file diff --git a/analysis/study_definition_4.py b/analysis/study_definition_4.py deleted file mode 100644 index f4cb388..0000000 --- a/analysis/study_definition_4.py +++ /dev/null @@ -1,94 +0,0 @@ -from cohortextractor import ( - StudyDefinition, - Measure, - patients, - codelist, - combine_codelists, - codelist_from_csv, -) - -from codelists import * - -def make_variable(code): - return { - f"eth_{code}": ( - patients.with_these_clinical_events( - codelist([code], system="snomed"), - on_or_after="2010-01-01", - returning="number_of_matches_in_period", - include_date_of_match=False, - date_format="YYYY-MM-DD", - return_expectations={ - "incidence": 0.1, - "int": {"distribution": "normal", "mean": 3, "stddev": 1}, - }, - ) - ) - } - - -def loop_over_codes(code_list): - variables = {} - for code in code_list: - variables.update(make_variable(code)) - return variables - - -## STUDY POPULATION - - -## STUDY POPULATION -# Defines both the study population and points to the important covariates - -study = StudyDefinition( - default_expectations={ - "date": {"earliest": "1970-01-01", "latest": "today"}, - "rate": "uniform", - "incidence": 0.2, - }, - - # STUDY POPULATION - population=patients.registered_with_one_practice_between("2021-07-01","2021-07-01"), - - ## DEMOGRAPHIC COVARIATES - # AGE - age=patients.age_as_of( - "2021-07-01", - return_expectations={ - "rate": "universal", - "int": {"distribution": "population_ages"}, - }, - ), - - # SEX - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } - ), - - ethnicity=patients.with_these_clinical_events( - group4, - return_expectations={"incidence": 0.50}, - ), - - **loop_over_codes(group4), - first_ethnicity_code=patients.with_these_clinical_events( - group4, - returning="code", - find_first_match_in_period=True, - return_expectations={ - "incidence": 0.05, - "category": { - "ratios": { - "1024701000000100": 0.2, - "110751000000108": 0.2, - "110791000000100": 0.3, - "13440006": 0.2, - "14999008": 0.1, - } - }, - }, - ), -) \ No newline at end of file diff --git a/analysis/study_definition_5.py b/analysis/study_definition_5.py index 9233134..3286e76 100644 --- a/analysis/study_definition_5.py +++ b/analysis/study_definition_5.py @@ -1,94 +1,91 @@ from cohortextractor import ( StudyDefinition, - Measure, patients, codelist, - combine_codelists, codelist_from_csv, + combine_codelists, +) # NOQA +from create_variables import ( + demographic_variables, + clinical_variables, + ethnicity_5_variables, ) - from codelists import * +from config import * -def make_variable(code): - return { - f"eth_{code}": ( - patients.with_these_clinical_events( - codelist([code], system="snomed"), - on_or_after="2010-01-01", - returning="number_of_matches_in_period", - include_date_of_match=False, - date_format="YYYY-MM-DD", - return_expectations={ - "incidence": 0.1, - "int": {"distribution": "normal", "mean": 3, "stddev": 1}, - }, - ) - ) - } - - -def loop_over_codes(code_list): - variables = {} - for code in code_list: - variables.update(make_variable(code)) - return variables - +definitions = [ + "ethnicity_5", + "ethnicity_new_5", + "ethnicity_primis_5", +] +definitions_16 = [ + "ethnicity_16", + "ethnicity_new_16", + "ethnicity_primis_16", +] +other_vars = ["asian", "black", "mixed", "other", "white"] +other_vars_16 = [ + "White_British", + "White_Irish", + "Other_White", + "White_and_Black_Caribbean", + "White_and_Black_African", + "White_and_Asian", + "Other_Mixed", + "Indian", + "Pakistani", + "Bangladeshi", + "Other_Asian", + "Caribbean", + "African", + "Other_Black", + "Chinese", + "Any_other_ethnic_group", +] -## STUDY POPULATION +ethnicity_combinations_5 = [ + f"{definition}_{other_var}" + for definition, other_var in product(definitions, other_vars) +] +ethnicity_combinations_16 = [ + f"{definition}_{other_var}" + for definition, other_var in product(definitions_16, other_vars_16) +] +ethnicity_combinations = ethnicity_combinations_5 - -## STUDY POPULATION -# Defines both the study population and points to the important covariates +codelists = { + name: patients.with_these_clinical_events( + globals()[name], + returning="number_of_matches_in_period", + return_expectations={ + "int": {"distribution": "normal", "mean": 6, "stddev": 3}, + "incidence": 0.1, + }, + ) + for name in ethnicity_combinations +} study = StudyDefinition( + index_date=index_date, default_expectations={ - "date": {"earliest": "1970-01-01", "latest": "today"}, + "date": {"earliest": "index_date", "latest": "last_day_of_month(index_date)"}, "rate": "uniform", - "incidence": 0.2, + "incidence": 0.65, }, - - # STUDY POPULATION - population=patients.registered_with_one_practice_between("2021-07-01","2021-07-01"), - - ## DEMOGRAPHIC COVARIATES - # AGE - age=patients.age_as_of( - "2021-07-01", - return_expectations={ - "rate": "universal", - "int": {"distribution": "population_ages"}, - }, - ), - - # SEX - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } + population=patients.satisfying( + """ + (sex = "M" OR sex = "F") + """, ), - - ethnicity=patients.with_these_clinical_events( - group5, - return_expectations={"incidence": 0.50}, + # Death date (to censor these patients in longitudinal analyses) + died_date_ons=patients.died_from_any_cause( + between=["2015-01-01", "2021-12-31"], + returning="date_of_death", + date_format="YYYY-MM-DD", + return_expectations={"date": {"earliest": "index_date"}}, ), - - **loop_over_codes(group5), - first_ethnicity_code=patients.with_these_clinical_events( - group5, - returning="code", - find_first_match_in_period=True, - return_expectations={ - "incidence": 0.05, - "category": { - "ratios": { - "1024701000000100": 0.2, - "110751000000108": 0.2, - "110791000000100": 0.3, - "13440006": 0.2, - "14999008": 0.1, - } - }, - }, - ), -) \ No newline at end of file + **ethnicity_5_variables, + **demographic_variables, + **clinical_variables, + **codelists, +) diff --git a/analysis/study_definition_6.py b/analysis/study_definition_6.py deleted file mode 100644 index f1a69f4..0000000 --- a/analysis/study_definition_6.py +++ /dev/null @@ -1,94 +0,0 @@ -from cohortextractor import ( - StudyDefinition, - Measure, - patients, - codelist, - combine_codelists, - codelist_from_csv, -) - -from codelists import * - -def make_variable(code): - return { - f"eth_{code}": ( - patients.with_these_clinical_events( - codelist([code], system="snomed"), - on_or_after="2010-01-01", - returning="number_of_matches_in_period", - include_date_of_match=False, - date_format="YYYY-MM-DD", - return_expectations={ - "incidence": 0.1, - "int": {"distribution": "normal", "mean": 3, "stddev": 1}, - }, - ) - ) - } - - -def loop_over_codes(code_list): - variables = {} - for code in code_list: - variables.update(make_variable(code)) - return variables - - -## STUDY POPULATION - - -## STUDY POPULATION -# Defines both the study population and points to the important covariates - -study = StudyDefinition( - default_expectations={ - "date": {"earliest": "1970-01-01", "latest": "today"}, - "rate": "uniform", - "incidence": 0.2, - }, - - # STUDY POPULATION - population=patients.registered_with_one_practice_between("2021-07-01","2021-07-01"), - - ## DEMOGRAPHIC COVARIATES - # AGE - age=patients.age_as_of( - "2021-07-01", - return_expectations={ - "rate": "universal", - "int": {"distribution": "population_ages"}, - }, - ), - - # SEX - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } - ), - - ethnicity=patients.with_these_clinical_events( - group6, - return_expectations={"incidence": 0.50}, - ), - - **loop_over_codes(group6), - first_ethnicity_code=patients.with_these_clinical_events( - group6, - returning="code", - find_first_match_in_period=True, - return_expectations={ - "incidence": 0.05, - "category": { - "ratios": { - "1024701000000100": 0.2, - "110751000000108": 0.2, - "110791000000100": 0.3, - "13440006": 0.2, - "14999008": 0.1, - } - }, - }, - ), -) \ No newline at end of file diff --git a/analysis/study_definition_7.py b/analysis/study_definition_7.py deleted file mode 100644 index fd894e4..0000000 --- a/analysis/study_definition_7.py +++ /dev/null @@ -1,94 +0,0 @@ -from cohortextractor import ( - StudyDefinition, - Measure, - patients, - codelist, - combine_codelists, - codelist_from_csv, -) - -from codelists import * - -def make_variable(code): - return { - f"eth_{code}": ( - patients.with_these_clinical_events( - codelist([code], system="snomed"), - on_or_after="2010-01-01", - returning="number_of_matches_in_period", - include_date_of_match=False, - date_format="YYYY-MM-DD", - return_expectations={ - "incidence": 0.1, - "int": {"distribution": "normal", "mean": 3, "stddev": 1}, - }, - ) - ) - } - - -def loop_over_codes(code_list): - variables = {} - for code in code_list: - variables.update(make_variable(code)) - return variables - - -## STUDY POPULATION - - -## STUDY POPULATION -# Defines both the study population and points to the important covariates - -study = StudyDefinition( - default_expectations={ - "date": {"earliest": "1970-01-01", "latest": "today"}, - "rate": "uniform", - "incidence": 0.2, - }, - - # STUDY POPULATION - population=patients.registered_with_one_practice_between("2021-07-01","2021-07-01"), - - ## DEMOGRAPHIC COVARIATES - # AGE - age=patients.age_as_of( - "2021-07-01", - return_expectations={ - "rate": "universal", - "int": {"distribution": "population_ages"}, - }, - ), - - # SEX - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } - ), - - ethnicity=patients.with_these_clinical_events( - group7, - return_expectations={"incidence": 0.50}, - ), - - **loop_over_codes(group7), - first_ethnicity_code=patients.with_these_clinical_events( - group7, - returning="code", - find_first_match_in_period=True, - return_expectations={ - "incidence": 0.05, - "category": { - "ratios": { - "1024701000000100": 0.2, - "110751000000108": 0.2, - "110791000000100": 0.3, - "13440006": 0.2, - "14999008": 0.1, - } - }, - }, - ), -) \ No newline at end of file diff --git a/analysis/study_definition_8.py b/analysis/study_definition_8.py deleted file mode 100644 index f0d1ac9..0000000 --- a/analysis/study_definition_8.py +++ /dev/null @@ -1,94 +0,0 @@ -from cohortextractor import ( - StudyDefinition, - Measure, - patients, - codelist, - combine_codelists, - codelist_from_csv, -) - -from codelists import * - -def make_variable(code): - return { - f"eth_{code}": ( - patients.with_these_clinical_events( - codelist([code], system="snomed"), - on_or_after="2010-01-01", - returning="number_of_matches_in_period", - include_date_of_match=False, - date_format="YYYY-MM-DD", - return_expectations={ - "incidence": 0.1, - "int": {"distribution": "normal", "mean": 3, "stddev": 1}, - }, - ) - ) - } - - -def loop_over_codes(code_list): - variables = {} - for code in code_list: - variables.update(make_variable(code)) - return variables - - -## STUDY POPULATION - - -## STUDY POPULATION -# Defines both the study population and points to the important covariates - -study = StudyDefinition( - default_expectations={ - "date": {"earliest": "1970-01-01", "latest": "today"}, - "rate": "uniform", - "incidence": 0.2, - }, - - # STUDY POPULATION - population=patients.registered_with_one_practice_between("2021-07-01","2021-07-01"), - - ## DEMOGRAPHIC COVARIATES - # AGE - age=patients.age_as_of( - "2021-07-01", - return_expectations={ - "rate": "universal", - "int": {"distribution": "population_ages"}, - }, - ), - - # SEX - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } - ), - - ethnicity=patients.with_these_clinical_events( - group8, - return_expectations={"incidence": 0.50}, - ), - - **loop_over_codes(group8), - first_ethnicity_code=patients.with_these_clinical_events( - group8, - returning="code", - find_first_match_in_period=True, - return_expectations={ - "incidence": 0.05, - "category": { - "ratios": { - "1024701000000100": 0.2, - "110751000000108": 0.2, - "110791000000100": 0.3, - "13440006": 0.2, - "14999008": 0.1, - } - }, - }, - ), -) \ No newline at end of file diff --git a/analysis/study_definition_9.py b/analysis/study_definition_9.py deleted file mode 100644 index b579893..0000000 --- a/analysis/study_definition_9.py +++ /dev/null @@ -1,94 +0,0 @@ -from cohortextractor import ( - StudyDefinition, - Measure, - patients, - codelist, - combine_codelists, - codelist_from_csv, -) - -from codelists import * - -def make_variable(code): - return { - f"eth_{code}": ( - patients.with_these_clinical_events( - codelist([code], system="snomed"), - on_or_after="2010-01-01", - returning="number_of_matches_in_period", - include_date_of_match=False, - date_format="YYYY-MM-DD", - return_expectations={ - "incidence": 0.1, - "int": {"distribution": "normal", "mean": 3, "stddev": 1}, - }, - ) - ) - } - - -def loop_over_codes(code_list): - variables = {} - for code in code_list: - variables.update(make_variable(code)) - return variables - - -## STUDY POPULATION - - -## STUDY POPULATION -# Defines both the study population and points to the important covariates - -study = StudyDefinition( - default_expectations={ - "date": {"earliest": "1970-01-01", "latest": "today"}, - "rate": "uniform", - "incidence": 0.2, - }, - - # STUDY POPULATION - population=patients.registered_with_one_practice_between("2021-07-01","2021-07-01"), - - ## DEMOGRAPHIC COVARIATES - # AGE - age=patients.age_as_of( - "2021-07-01", - return_expectations={ - "rate": "universal", - "int": {"distribution": "population_ages"}, - }, - ), - - # SEX - sex=patients.sex( - return_expectations={ - "rate": "universal", - "category": {"ratios": {"M": 0.49, "F": 0.51}}, - } - ), - - ethnicity=patients.with_these_clinical_events( - group9, - return_expectations={"incidence": 0.50}, - ), - - **loop_over_codes(group9), - first_ethnicity_code=patients.with_these_clinical_events( - group9, - returning="code", - find_first_match_in_period=True, - return_expectations={ - "incidence": 0.05, - "category": { - "ratios": { - "1024701000000100": 0.2, - "110751000000108": 0.2, - "110791000000100": 0.3, - "13440006": 0.2, - "14999008": 0.1, - } - }, - }, - ), -) \ No newline at end of file diff --git a/analysis/study_definition_monthly_ethnicities_measures_years.py b/analysis/study_definition_monthly_ethnicities_measures_years.py new file mode 100644 index 0000000..25f5a09 --- /dev/null +++ b/analysis/study_definition_monthly_ethnicities_measures_years.py @@ -0,0 +1,109 @@ +from cohortextractor import ( + StudyDefinition, + patients, + codelist_from_csv, + codelist, + Measure, + params +) +from create_variables import demographic_variables, clinical_variables, ethnicity_5_variables +from codelists import * +from config import * +from datetime import date + +other_vars = ["asian", "black", "mixed", "other", "white"] +demographic_covariates = ["age_band", "sex", "region", "imd"] +clinical_covariates = ["dementia", "diabetes", "hypertension", "learning_disability"] + +ethnicity_combinations_5 = [ + f"ethnicity_new_5_{other_var}" + for other_var in other_vars +] + +codelists = { + name: patients.with_these_clinical_events( + globals()[name], + returning="binary_flag", + on_or_before = "index_date", + return_expectations={ + "int": {"distribution": "normal", "mean": 6, "stddev": 3}, + "incidence": 0.1, + }, + ) + for name in ethnicity_combinations_5 +} + + +# Specifiy study definition +study = StudyDefinition( + index_date=index_date, + default_expectations={ + "date": {"earliest": "index_date", "latest": "last_day_of_month(index_date)"}, + "rate": "exponential_increase", + "incidence": 0.1, + }, + + population=patients.satisfying( + """ + registered AND + (NOT died) AND + (NOT null_date) + """, + ), + + null_date=patients.with_these_clinical_events( + ethnicity_codes_snomed, + returning="binary_flag", + between=["1900-01-01", "1900-01-01"], + return_expectations={"incidence": 0.01,} + ), + + ethnicity_new_5_month=patients.with_these_clinical_events( + ethnicity_codes_snomed, + returning="binary_flag", + find_last_match_in_period=True, + include_date_of_match=False, + on_or_before = "index_date", + return_expectations={ + "category": {"ratios": {"1": 0.6, "2": 0.1, "3": 0.1, "4": 0.1, "5": 0.1}}, + "incidence": 0.75, + }, + ), + + died = patients.died_from_any_cause( + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.1} + ), + **ethnicity_5_variables, + **codelists, + **demographic_variables, + **clinical_variables, + ##### SRO measures + +) +#### Measures + +measures = [ ] + + +### ethncicity measures +for measure in ethnicity_combinations_5 + ['ethnicity_new_5_month']: + measures.extend([ + Measure( + id=f"{measure}_rate", + numerator=measure, + denominator="population", + group_by=["population"] + ) + ]) + +for covar in demographic_covariates + clinical_covariates: + measures.extend([ + Measure( + id=f"ethnicity_{covar}_rate", + numerator='ethnicity_new_5_month', + denominator="population", + group_by=[covar] + ) + ]) \ No newline at end of file diff --git a/analysis/study_definition_nulldates_ethnicities_measures_years.py b/analysis/study_definition_nulldates_ethnicities_measures_years.py new file mode 100644 index 0000000..55e38bd --- /dev/null +++ b/analysis/study_definition_nulldates_ethnicities_measures_years.py @@ -0,0 +1,124 @@ +from cohortextractor import ( + StudyDefinition, + patients, + codelist_from_csv, + codelist, + Measure, + params +) + +from config import * +from datetime import date + + +ethnicity_codes_snomed = codelist_from_csv( + "codelists/opensafely-ethnicity-snomed-0removed.csv", + system="snomed", + column="snomedcode", + category_column="Grouping_6", +) + +# Specifiy study definition +study = StudyDefinition( + index_date=index_date, + default_expectations={ + "date": {"earliest": "index_date", "latest": "last_day_of_month(index_date)"}, + "rate": "exponential_increase", + "incidence": 0.1, + }, + + population=patients.satisfying( + """ + registered + """, + ), + + null_date=patients.with_these_clinical_events( + ethnicity_codes_snomed, + returning="binary_flag", + between=["1900-01-01", "1900-01-01"], + return_expectations={"incidence": 0.01,} + ), + + died = patients.died_from_any_cause( + on_or_before="index_date", + returning="binary_flag", + return_expectations={"incidence": 0.1} + ), + population_living=patients.satisfying( + """ + registered AND + (NOT died) + """, + ), + # Age + age=patients.age_as_of( + "index_date", + return_expectations={ + "rate": "universal", + "int": {"distribution": "population_ages"}, + }, + ), + # Age band + age_band=patients.categorised_as( + { + "missing": "DEFAULT", + "0-19": """ age >= 0 AND age < 20""", + "20-29": """ age >= 20 AND age < 30""", + "30-39": """ age >= 30 AND age < 40""", + "40-49": """ age >= 40 AND age < 50""", + "50-59": """ age >= 50 AND age < 60""", + "60-69": """ age >= 60 AND age < 70""", + "70-79": """ age >= 70 AND age < 80""", + "80+": """ age >= 80 AND age < 120""", + }, + return_expectations={ + "rate": "universal", + "category": { + "ratios": { + "0-19": 0.125, + "20-29": 0.125, + "30-39": 0.125, + "40-49": 0.125, + "50-59": 0.125, + "60-69": 0.125, + "70-79": 0.125, + "80+": 0.125, + } + }, + }, + ), + +) + +#### Measures +measures = [ ] + + +### ethncicity measures +measures.extend([ + Measure( + id=f"nulldate_age_band_rate", + numerator="null_date", + denominator="population_living", + group_by=["age_band"] +) +]) + +measures.extend([ + Measure( + id=f"nulldate_age_band_allpt_rate", + numerator="null_date", + denominator="population", + group_by=["age_band"] +) +]) + +measures.extend([ + Measure( + id=f"nulldate_rate", + numerator='null_date', + denominator="population_living", + group_by=["population"] +) +]) \ No newline at end of file diff --git a/analysis/study_definition_time.py b/analysis/study_definition_time.py new file mode 100644 index 0000000..cd6dcfa --- /dev/null +++ b/analysis/study_definition_time.py @@ -0,0 +1,86 @@ +from cohortextractor import ( + StudyDefinition, + patients, + codelist, + codelist_from_csv, + combine_codelists, +) # NOQA +from create_variables import demographic_variables, clinical_variables, ethnicity_overtime_variables +from codelists import * +from config import * + +definitions = [ + "ethnicity_5", + "ethnicity_new_5", + "ethnicity_primis_5", +] +definitions_16 = [ + "ethnicity_16", + "ethnicity_new_16", + "ethnicity_primis_16", +] +other_vars = ["asian", "black", "mixed", "other", "white"] +other_vars_16 = [ + "White_British", + "White_Irish", + "Other_White", + "White_and_Black_Caribbean", + "White_and_Black_African", + "White_and_Asian", + "Other_Mixed", + "Indian", + "Pakistani", + "Bangladeshi", + "Other_Asian", + "Caribbean", + "African", + "Other_Black", + "Chinese", + "Any_other_ethnic_group", +] + +ethnicity_combinations_5 = [ + f"{definition}_{other_var}" + for definition, other_var in product(definitions, other_vars) +] +ethnicity_combinations_16 = [ + f"{definition}_{other_var}" + for definition, other_var in product(definitions_16, other_vars_16) +] +ethnicity_combinations = ethnicity_combinations_5 + ethnicity_combinations_16 + +codelists = { + name: patients.with_these_clinical_events( + globals()[name], + returning="number_of_matches_in_period", + return_expectations={ + "int": {"distribution": "normal", "mean": 6, "stddev": 3}, + "incidence": 0.1, + }, + ) + for name in ethnicity_combinations +} + +study = StudyDefinition( + index_date=index_date, + default_expectations={ + "date": {"earliest": "index_date", "latest": "last_day_of_month(index_date)"}, + "rate": "uniform", + "incidence": 0.65, + }, + population=patients.satisfying( + """ + (sex = "M" OR sex = "F") + """, + ), + # Death date (to censor these patients in longitudinal analyses) + died_date_ons=patients.died_from_any_cause( + between=["2015-01-01", "2021-12-31"], + returning="date_of_death", + date_format="YYYY-MM-DD", + return_expectations={"date": {"earliest": "index_date"}}, + ), + **ethnicity_overtime_variables, + **demographic_variables, + **clinical_variables +) diff --git a/analysis/sus/combine_ons_sus.R b/analysis/sus/combine_ons_sus.R new file mode 100644 index 0000000..0478884 --- /dev/null +++ b/analysis/sus/combine_ons_sus.R @@ -0,0 +1,252 @@ +library("tidyverse") +library("here") +library("glue") +library("stringr") +library("scales") +library('magrittr') + +## import ONS Census data +eth_ons_input_2001 <- read_csv(here::here("data", "ethnicity_2021_census_2001_5_categories.csv.gz")) +eth_ons_input_2021 <- read_csv(here::here("data", "ethnicity_2021_census_5_categories.csv.gz")) + +### Add England to ONS Census data +eth_ons <- eth_ons_input_2001 %>% + group_by(group, Ethnic_Group, cohort) %>% + summarise(N = sum(N)) %>% + group_by(group, cohort) %>% + mutate( + N = N, + Total = sum(N), + region = "England" + ) %>% + bind_rows(eth_ons_input_2001) + +eth_ons_2021 <- eth_ons_input_2021 %>% + group_by(group, Ethnic_Group, cohort) %>% + summarise(N = sum(N)) %>% + group_by(group, cohort) %>% + mutate( + N = N, + Total = sum(N), + region = "England" + ) %>% + bind_rows(eth_ons_input_2021) + +# get total population per region for OS data +for (codelist in c("new", "ctv3")) { + ifelse(codelist == "new", ethnicity <- "ethnicity_new_5_filled", ethnicity <- "ethnicity_5_filled") + # get total population per region for OS data + assign(glue("population_{codelist}"), read_csv(here::here("output", "sus", "simplified_output", "5_group", "tables", glue("simple_patient_counts_5_group_{codelist}_sus_registered.csv")), col_types = (cols())) %>% + filter(group == "region" | group == "all") %>% + summarise( + subgroup = subgroup, + !!glue("population_{codelist}") := !!as.name(ethnicity), + !!glue("population_{codelist}_supp") := any_filled + ) %>% + pivot_longer(contains("population"), + names_to = c("cohort"), + names_pattern = "_(.*)", + values_to = "Total" + )) +} +population <- population_new %>% + bind_rows(population_ctv3) + +# filter OS data to regions + +for (codelist in c("new", "ctv3")) { + ethnicity <- + read_csv(here::here("output", "sus", "simplified_output", "5_group", "tables", glue("simple_patient_counts_categories_5_group_{codelist}_sus_registered.csv")), col_types = (cols())) %>% + filter(group == "region" | group == "all") %>% + select(-population) %>% + rename_all(tolower) + + assign(glue("ethnicity_2001_{codelist}"), ethnicity %>% + # prune column headings + rename_with(~ sub("supplemented", glue("{codelist}supp"), .), contains("supplemented")) %>% + rename_with(~ sub("ethnicity_", "ctv3_", .), contains("ethnicity_5")) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_5_filled", "", .), contains("_5_filled")) %>% + # remove unused columns + select(-contains("filled"), -contains("missing"), -contains("sus")) %>% + # remove unused columns + select(-contains("filled"), -contains("missing"), -contains("sus")) %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "cohort"), + names_sep = "_", + values_to = "N" + ) %>% + filter(cohort != "any") %>% + mutate(cohort = case_when( + cohort == glue("{codelist}supp") ~ glue("{codelist}_supp"), + T ~ cohort + )) %>% + inner_join(population, by = c("subgroup", "cohort")) %>% + summarise( + region = case_when( + subgroup == "with records" ~ "England", + TRUE ~ subgroup + ), + Ethnic_Group = str_to_sentence(ethnicity), + Ethnic_Group = fct_relevel( + Ethnic_Group, + "Asian", "Black", "Mixed", "White", "Other" + ), + N = N, + Total = Total, + group = 5, + cohort + )) +} + +ethnicity_2001 <- ethnicity_2001_ctv3 %>% + bind_rows(ethnicity_2001_new) %>% + bind_rows(eth_ons) %>% + mutate( + N = round(N / 5) * 5, + Total = round(Total / 5) * 5, + percentage = N / Total * 100, + group = as.character(group), + region = case_when( + region == "East" ~ "East of England", + region == "Yorkshire and The Humber" ~ "Yorkshire and the Humber", + TRUE ~ region + ) + ) %>% + filter(region != "Wales") + +write_csv(ethnicity_2001, here::here("output", "sus", "simplified_output", "5_group", "tables", "ethnic_group_2021_registered_with_2001_categories.csv")) + + +### 16 group +## import ONS Census data +eth_ons_input_2001 <- read_csv(here::here("data", "ethnicity_2021_census_2001_16_categories.csv.gz")) %>% + mutate( + Ethnic_Group = case_when( + Ethnic_Group == "English, Welsh, Scottish, Northern Irish or British" ~ "White British", + Ethnic_Group == "Irish" ~ "White Irish", + Ethnic_Group == "Arab" ~ "Any other ethnic group", + Ethnic_Group == "Gypsy or Irish Traveller" ~ "Other White", + Ethnic_Group == "Roma" ~ "Other White", + Ethnic_Group == "Other Mixed or Multiple ethnic groups" ~ "Other_Mixed", + TRUE ~ Ethnic_Group + ) + ) +eth_ons_input_2021 <- read_csv(here::here("data", "ethnicity_2021_census_16_categories.csv.gz")) %>% + mutate( + Ethnic_Group = case_when( + Ethnic_Group == "English, Welsh, Scottish, Northern Irish or British" ~ "White British", + Ethnic_Group == "Irish" ~ "White Irish", + Ethnic_Group == "Arab" ~ "Any other ethnic group", + Ethnic_Group == "Gypsy or Irish Traveller" ~ "Other White", + Ethnic_Group == "Roma" ~ "Other White", + Ethnic_Group == "Other Mixed or Multiple ethnic groups" ~ "Other_Mixed", + TRUE ~ Ethnic_Group + ) + ) + +### Add England to ONS Census data +eth_ons_16 <- eth_ons_input_2001 %>% + group_by(group, Ethnic_Group, cohort) %>% + summarise(N = sum(N)) %>% + group_by(group, cohort) %>% + mutate( + N = N, + Total = sum(N), + region = "England", + ) %>% + bind_rows(eth_ons_input_2001) + +eth_ons_2021 <- eth_ons_input_2021 %>% + group_by(group, Ethnic_Group, cohort) %>% + summarise(N = sum(N)) %>% + group_by(group, cohort) %>% + mutate( + N = N, + Total = sum(N), + region = "England" + ) %>% + bind_rows(eth_ons_input_2021) + +for (codelist in c("new", "ctv3")) { + ifelse(codelist == "new", ethnicity <- "ethnicity_new_16_filled", ethnicity <- "ethnicity_16_filled") + # get total population per region for OS data + assign(glue("population_{codelist}"), read_csv(here::here("output", "sus", "simplified_output", "16_group", "tables", glue("simple_patient_counts_16_group_{codelist}_sus_registered.csv")), col_types = (cols())) %>% + filter(group == "region" | group == "all") %>% + summarise( + subgroup = subgroup, + !!glue("population_{codelist}") := !!as.name(ethnicity), + !!glue("population_{codelist}_supp") := any_filled + ) %>% + pivot_longer(contains("population"), + names_to = c("cohort"), + names_pattern = "_(.*)", + values_to = "Total" + )) +} +population <- population_new %>% + bind_rows(population_ctv3) + + +# filter OS data to regions + +for (codelist in c("new", "ctv3")) { + ethnicity <- + read_csv(here::here("output", "sus", "simplified_output", "16_group", "tables", glue("simple_patient_counts_categories_16_group_{codelist}_sus_registered.csv")), col_types = (cols())) %>% + filter(group == "region" | group == "all") %>% + select(-population) + + assign(glue("ethnicity_2001_{codelist}"), ethnicity %>% + # prune column headings + rename_with(~ sub("supplemented", glue("{codelist}supp"), .), contains("supplemented")) %>% + rename_with(~ sub("ethnicity_", "ctv3_", .), contains("ethnicity_16")) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_16_filled", "", .), contains("_16_filled")) %>% + # remove unused columns + select(-contains("filled"), -contains("missing"), -contains("sus")) %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "cohort"), + names_pattern = "(^.*)_(.*)", + values_to = "N" + ) %>% + filter(cohort != "any") %>% + mutate(cohort = case_when( + cohort == glue("{codelist}supp") ~ glue("{codelist}_supp"), + T ~ cohort + )) %>% + inner_join(population, by = c("subgroup", "cohort")) %>% + summarise( + region = case_when( + subgroup == "with records" ~ "England", + TRUE ~ subgroup + ), + Ethnic_Group = fct_relevel( + ethnicity, + "Indian", "Pakistani", "Bangladeshi", "Other_Asian", "Caribbean", "African", "Other_Black", "White_and_Black_Caribbean", "White_and_Black_African", "White_and_Asian", "Other_Mixed", "White_British", "White_Irish", "Other_White", "Chinese", "Any_other_ethnic_group" + ), + N = N, + Total = Total, + group = 16, + cohort + )) +} + +ethnicity_2001 <- ethnicity_2001_ctv3 %>% + bind_rows(ethnicity_2001_new) %>% + bind_rows(eth_ons_16) %>% + mutate( + N = round(N / 5) * 5, + Total = round(Total / 5) * 5, + percentage = N / Total * 100, + group = as.character(group), + region = case_when( + region == "East" ~ "East of England", + region == "Yorkshire and The Humber" ~ "Yorkshire and the Humber", + TRUE ~ region + ) + ) %>% + filter(region != "Wales") + +write_csv(ethnicity_2001, here::here("output", "sus", "simplified_output", "16_group", "tables", "ethnic_group_2021_registered_with_2001_categories.csv")) diff --git a/analysis/sus/lib_phenotype_validation_sus.py b/analysis/sus/lib_phenotype_validation_sus.py new file mode 100644 index 0000000..1197078 --- /dev/null +++ b/analysis/sus/lib_phenotype_validation_sus.py @@ -0,0 +1,722 @@ +import datetime +import itertools +import matplotlib.gridspec as gridspec +import numpy as np +import os +import pandas as pd +import seaborn as sns + +from matplotlib import cm +from ebmdatalab import charts +from functools import reduce +from matplotlib import pyplot as plt +from upsetplot import * + + +def redact_round_table(df_in): + """Redacts counts <= 7 and rounds counts to nearest 5""" + df_out = df_in.where(df_in > 7, np.nan).apply(lambda x: 5 * round(x / 5)) + return df_out + + +def import_clean( + input_path, + definitions, + other_vars, + demographic_covariates, + clinical_covariates, + reg, + null, + date_min, + date_max, + time_delta, + output_path, + grouping, + code_dict="", + dates=False, + registered=True, + dates_check=True, +): + # Import + df_import = pd.read_feather(input_path) + + # Check whether output paths exist or not, create if missing + path_tables = f"output/{output_path}/{grouping}/tables/" + path_figures = f"output/{output_path}/{grouping}/figures/" + li_filepaths = [path_tables, path_figures] + + for filepath in li_filepaths: + exists = os.path.exists(filepath) + print(filepath) + if not exists: + print(filepath) + os.makedirs(filepath) + + # restrict to registered as of index date + if registered == True: + df_import = df_import[df_import[reg]] + + # Dates + if dates == True: + date_vars = [definition + "_date" for definition in definitions] + # Create variable that captures difference in measurement dates + date_diff_vars = [] + # Define start and end dates + start_date = datetime.datetime.strptime(date_min, "%Y-%m-%d") + end_date = datetime.datetime.strptime(date_max, "%Y-%m-%d") + for definition in definitions: + # Remove OpenSAFELY null dates + df_import.loc[ + df_import[definition + "_date"] == "1900-01-01", definition + "_date" + ] = np.nan + # Limit to period of interest + df_import[definition + "_date"] = pd.to_datetime( + df_import[definition + "_date"] + ) + df_import.loc[ + df_import[definition + "_date"] < start_date, definition + "_date" + ] = np.nan + df_import.loc[ + df_import[definition + "_date"] > end_date, definition + "_date" + ] = np.nan + # Remove the measurement if outside the date parameters + df_import.loc[df_import[definition + "_date"].isna(), definition] = np.nan + df_import + # Create difference between measurement dates + df_import[definition + "_date"] = ( + df_import[definition + "_date"] + .dt.to_period(time_delta) + .dt.to_timestamp() + ) + df_import = df_import.sort_values(by=["patient_id", definition + "_date"]) + df_import["date_diff_" + definition] = round( + df_import.groupby("patient_id")[definition + "_date"].diff() + / np.timedelta64(1, time_delta) + ) + date_diff_vars.append("date_diff_" + definition) + else: + date_vars = [] + date_diff_vars = [] + # Codes + if code_dict != "": + for key in code_dict: + df_import[key] = df_import[key].astype(float) + df_import[key] = df_import[key].replace(code_dict[key]) + # Subset to relevant columns + if dates_check: + dates = [f"{definition}_date" for definition in definitions] + df_clean = df_import[ + ["patient_id"] + + definitions + + other_vars + + demographic_covariates + + clinical_covariates + ] + # Limit to relevant date range + df_clean = df_clean.sort_values(by="patient_id").reset_index(drop=True) + # Set null values to nan + for definition in definitions: + df_clean.loc[df_clean[definition].isin(null), definition] = np.nan + # Create order for categorical variables + for group in demographic_covariates + clinical_covariates: + if df_clean[group].dtype.name == "category": + li_order = sorted(df_clean[group].dropna().unique().tolist()) + df_clean[group] = df_clean[group].cat.reorder_categories( + li_order, ordered=True + ) + # Mark patients with value filled/missing for each definition + li_filled = [] + for definition in definitions: + df_fill = pd.DataFrame( + df_clean.groupby("patient_id")[definition].any().astype("int") + ).rename(columns={definition: definition + "_filled"}) + df_fill[definition + "_missing"] = 1 - df_fill[definition + "_filled"] + li_filled.append(df_fill) + + df_filled = pd.concat(li_filled, axis=1) + # Remove list from memory + del li_filled + df_clean = df_clean.merge(df_filled, on="patient_id") + + # Flag all filled/all missing + li_col_filled = [col for col in df_clean.columns if col.endswith("_filled")] + li_col_missing = [col for col in df_clean.columns if col.endswith("_missing")] + + df_clean["any_filled"] = (df_clean[li_col_filled].sum(axis=1) > 0).astype(int) + + df_clean["all_missing"] = ( + df_clean[li_col_missing].sum(axis=1) == len(definitions) + ).astype(int) + + df_clean["all_filled"] = ( + df_clean[li_col_filled].sum(axis=1) == len(definitions) + ).astype(int) + + return df_clean + + +def simple_latest_common_comparison( + df_clean, + definitions, + reg, + other_vars, + output_path, + grouping, + code_dict="", + missing_check=False, +): + for definition in definitions: + if missing_check: + df_clean = df_clean[df_clean[f"{definition}_date"] == "1900-01-01"] + vars = [s for s in other_vars if s.startswith(definition)] + df_subset = df_clean.loc[~df_clean[definition].isna()] + df_subset = df_subset[ + df_subset[definition].isin(code_dict[definition].values()) + ] + df_subset = df_subset[[definition] + vars].set_index(definition) + df_subset = df_subset.replace(0, np.nan) + # reorder columns + col_arrange = [ + f"{definition}_asian", + f"{definition}_black", + f"{definition}_mixed", + f"{definition}_white", + f"{definition}_other", + ] + df_subset = df_subset[col_arrange] + # find column with first instance of the maximum value + df_subset["max"] = df_subset.astype(float).idxmax(axis=1) + df_subset2 = df_subset + # returning 1 for the first column that contains the highest value and 0 for everything else + for col in df_subset2.columns: + df_subset2[col] = np.where(df_subset2["max"] == col, 1, 0) + # drop max column + df_subset2 = df_subset2[col_arrange] + df_sum = redact_round_table(df_subset2.groupby(definition).sum()) + if missing_check: + df_sum.to_csv( + f"output/{output_path}/{grouping}/tables/simple_latest_common_{definition}_missing_{reg}.csv" + ) + else: + df_sum.to_csv( + f"output/{output_path}/{grouping}/tables/simple_latest_common_{definition}_{reg}.csv" + ) + + +def simple_state_change( + df_clean, definitions, reg, other_vars, output_path, grouping, missing_check=False +): + for definition in definitions: + if missing_check: + df_clean = df_clean[df_clean[f"{definition}_date"] == "1900-01-01"] + vars = [s for s in other_vars if s.startswith(definition)] + df_subset = ( + df_clean[[definition] + vars] + .replace(0, np.nan) + .set_index(definition) + .reset_index() + ) + ### sum all 'vars' which are not null + df_subset[f"{definition}_any"] = df_subset[vars].notnull().sum(axis=1) + ### all px with a latest ethnicity must have at least 1 defined ethnicity + ### If they only have 1 recorded ethnicity this must equal the latest ethnicity + ### replace 1 with NULL and count all with over one recorded ethnicity (i.e. latest plus another ethnicity) + df_subset[f"{definition}_any"] = df_subset[f"{definition}_any"].replace( + 1, np.nan + ) + df_subset["n"] = 1 + ### check if any px have latest ethnicity but no recorded ethnicity (this should be impossible!) + # df_any_check=df_subset + # df_any_check[f"{definition}_any_check"]=df_any_check[f"{definition}_any"]==0 + # df_any_check[f"{definition}_any_check"]=df_any_check[f"{definition}_any_check"].replace(False, np.nan) + # df_any_check=df_any_check.groupby(definition).count() + # df_any_check=df_any_check[f"{definition}_any_check"] + # df_any_check.to_csv( + # f"output/{output_path}/{grouping}/tables/simple_{definition}_any_check.csv" + # ) + + # Count + df_subset2 = df_subset.loc[~df_subset[definition].isna()] + df_subset3 = redact_round_table( + df_subset2.groupby(definition).count() + ).reset_index() + if missing_check: + df_subset3.to_csv( + f"output/{output_path}/{grouping}/tables/simple_state_change_{definition}_missing_{reg}.csv" + ) + else: + df_subset3.to_csv( + f"output/{output_path}/{grouping}/tables/simple_state_change_{definition}_{reg}.csv" + ) + + +def simple_patient_counts( + df_clean, + definitions, + reg, + defin, + demographic_covariates, + clinical_covariates, + output_path, + grouping, + categories=False, +): + suffix = "_filled" + subgroup = "with records" + if categories == True: + li_cat_def = [] + li_cat = ( + df_clean[definitions[0]] + .dropna() + .astype(str) + .sort_values() + .unique() + .tolist() + ) + for x in li_cat: + for definition in definitions: + df_clean.loc[df_clean[definition] == x, f"{x}_{definition}_filled"] = 1 + li_cat_def.append(f"{x}_{definition}") + df_clean[f"{x}_any"] = ( + df_clean[df_clean.filter(regex=f"{x}").columns].sum(axis=1) > 0 + ).astype(int) + # Assumes definition[1] is sus and definition[0] is the primary codelist + df_clean[f"{x}_supplemented"] = ( + (df_clean[f"{x}_{definitions[0]}_filled"] == 1) + | ( + df_clean[definitions[0]].isnull() + & (df_clean[f"{x}_{definitions[1]}_filled"] == 1) + ) + ).astype(int) + definitions = li_cat_def + li_cat_any = [x + "_any" for x in li_cat] + li_cat_supplemented = [x + "_supplemented" for x in li_cat] + # All with measurement + li_filled = [] + for definition in definitions: + df_temp = ( + df_clean[["patient_id", definition + suffix]] + .drop_duplicates() + .dropna() + .set_index("patient_id") + ) + li_filled.append(df_temp) + if categories == True: + df_temp = ( + df_clean[ + ["patient_id", "all_filled", "all_missing", "any_filled"] + + li_cat_any + + li_cat_supplemented + ] + .drop_duplicates() + .dropna() + .set_index("patient_id") + ) + else: + df_temp = ( + df_clean[["patient_id", "all_filled", "all_missing", "any_filled"]] + .drop_duplicates() + .dropna() + .set_index("patient_id") + ) + li_filled.append(df_temp) + + df_temp2 = pd.concat(li_filled, axis=1) + df_temp2["population"] = 1 + # Remove list from memory + del li_filled + df_all = pd.DataFrame(df_temp2.sum()).T + df_all["group"], df_all["subgroup"] = ["all", subgroup] + df_all = df_all.set_index(["group", "subgroup"]) + + # By group + li_group = [] + for group in demographic_covariates + clinical_covariates: + li_filled_group = [] + for definition in definitions: + df_temp = ( + df_clean[["patient_id", definition + suffix, group]] + .drop_duplicates() + .dropna() + .reset_index(drop=True) + ) + li_filled_group.append(df_temp) + if categories == True: + df_temp = ( + df_clean[ + ["patient_id", "all_filled", "all_missing", "any_filled", group] + + li_cat_any + + li_cat_supplemented + ] + .drop_duplicates() + .dropna() + .reset_index(drop=True) + ) + li_filled_group.append(df_temp) + else: + df_temp = ( + df_clean[ + ["patient_id", "all_filled", "all_missing", "any_filled", group] + ] + .drop_duplicates() + .dropna() + .reset_index(drop=True) + ) + li_filled_group.append(df_temp) + + df_reduce = reduce( + lambda df1, df2: pd.merge(df1, df2, on=["patient_id", group], how="outer"), + li_filled_group, + ) + df_reduce["population"] = 1 + # Remove list from memory + del li_filled_group + df_reduce2 = ( + df_reduce.sort_values(by=group) + .drop(columns=["patient_id"]) + .groupby(group) + .sum() + .reset_index() + ) + df_reduce2["group"] = group + df_reduce2 = df_reduce2.rename(columns={group: "subgroup"}) + li_group.append(df_reduce2) + df_all_group = pd.concat(li_group, axis=0, ignore_index=True).set_index( + ["group", "subgroup"] + ) + # Remove list from memory + del li_group + + # Redact + df_append = redact_round_table(df_all.append(df_all_group)) + if categories: + df_append.to_csv( + f"output/{output_path}/{grouping}/tables/simple_patient_counts_categories_{grouping}_{defin}_{reg}.csv" + ) + else: + df_append.to_csv( + f"output/{output_path}/{grouping}/tables/simple_patient_counts_{grouping}_{defin}_{reg}.csv" + ) + + +def upset( + df_clean, + output_path, + comparator_1, + comparator_2, + grouping, +): + # create csv for output checking + upset_output_check = df_clean[[comparator_1, comparator_2]] + upset_output_check[comparator_1] = df_clean[comparator_1].fillna("Unknown") + upset_output_check[comparator_2] = df_clean[comparator_2].fillna("Unknown") + upset_output_check = pd.crosstab( + upset_output_check[comparator_1], upset_output_check[comparator_2] + ) + upset_output_check.to_csv(f"output/{output_path}/figures/upset_output_check.csv") + del upset_output_check + + upset_df = df_clean.set_index(~df_clean[comparator_1].isnull()) + upset_df = upset_df.set_index(~upset_df[comparator_2].isnull(), append=True) + + upset_df[comparator_1] = upset_df[comparator_1].fillna("Unknown") + upset = UpSet(upset_df, intersection_plot_elements=0) + + upset.add_stacked_bars( + by=comparator_1, colors=cm.Pastel1, title="Count by ethnicity", elements=10 + ) + + upset.plot() + plt.savefig( + f"output/{output_path}/{grouping}/figures/upset_{comparator_1}_{comparator_2}.png" + ) + + +def upset_cat( + df_clean, + output_path, + comparator_1, + comparator_2, + other_vars, + grouping, +): + upset_cat_df = pd.DataFrame(df_clean[comparator_1]) + for definition in [comparator_1, comparator_2]: + for var in other_vars: + upset_cat_df[f"{var}_{definition}"] = ( + df_clean[definition].str.lower() == var + ) + + for definition in [comparator_1, comparator_2]: + for var in other_vars: + if var == other_vars[0] and definition == comparator_1: + upset_cat_df = upset_cat_df.set_index( + upset_cat_df[f"{var}_{definition}"] == True + ) + else: + upset_cat_df = upset_cat_df.set_index( + upset_cat_df[f"{var}_{definition}"] == True, append=True + ) + upset_cat_df.drop([f"{var}_{definition}"], axis=1, inplace=True) + + upset_cat_df[comparator_1] = upset_cat_df[comparator_1].fillna("Unknown") + upset_cat = UpSet(upset_cat_df, intersection_plot_elements=0) + + upset_cat.add_stacked_bars( + by=comparator_1, colors=cm.Pastel1, title="Count by ethnicity", elements=10 + ) + + upset_cat.plot() + plt.savefig( + f"output/{output_path}/{grouping}/figures/upset_category_{comparator_1}_{comparator_2}.png" + ) + + +def records_over_time( + df_clean, + definitions, + demographic_covariates, + clinical_covariates, + output_path, + filepath, + grouping, + reg, +): + """ + Count the number of records over time + + Arguments: + df_clean: a dataframe that has been cleaned using import_clean() + definitions: a list of derived variables to be evaluated + demographic_covariates: a list of demographic covariates + clinical_covariates: a list of clinical covariates + output_path: filepath to the output folder + filepath: filepath to the output file + + Returns: + .csv file (underlying data) + .png file (line plot) + """ + li_df = [] + for definition in definitions: + df_grouped = ( + df_clean[[definition + "_date", definition]] + .groupby(definition + "_date") + .count() + .reset_index() + .rename(columns={definition + "_date": "date"}) + .set_index("date") + ) + li_df.append(redact_round_table(df_grouped)) + df_all_time = ( + pd.concat(li_df) + .stack() + .reset_index() + .rename(columns={"level_1": "variable", 0: "value"}) + ) + del li_df + + fig, ax = plt.subplots(figsize=(12, 8)) + fig.autofmt_xdate() + sns.lineplot( + x="date", y="value", hue="variable", data=df_all_time, ax=ax + ).set_title("New records by month") + ax.legend().set_title("") + if len(df_all_time) > 0: + df_all_time.to_csv( + f"output/{output_path}/{grouping}/tables/records_over_time{filepath}_{reg}.csv" + ) + plt.savefig( + f"output/{output_path}/{grouping}/figures/records_over_time{filepath}_{reg}.png" + ) + + for group in demographic_covariates + clinical_covariates: + for definition in definitions: + df_grouped = ( + df_clean[[definition + "_date", definition, group]] + .groupby([definition + "_date", group]) + .count() + .reset_index() + .rename(columns={definition + "_date": "date"}) + .set_index(["date", group]) + ) + df_time = redact_round_table(df_grouped).reset_index() + fig, ax = plt.subplots(figsize=(12, 8)) + fig.autofmt_xdate() + sns.lineplot( + x="date", y=definition, hue=group, data=df_time, ax=ax + ).set_title(f"{definition} recorded by {group} and month") + ax.legend().set_title("") + if len(df_time) > 0: + df_time.to_csv( + f"output/{output_path}/{grouping}/tables/records_over_time_{definition}_{group}{filepath}_{reg}.csv" + ) + plt.savefig( + f"output/{output_path}/{grouping}/figures/records_over_time_{definition}_{group}{filepath}_{reg}.png" + ) + + +def records_over_time_perc( + df_clean, + definitions, + demographic_covariates, + clinical_covariates, + output_path, + filepath, + grouping, + reg, +): + """ + Count the number of records over time as a percentage of all records + + Arguments: + df_clean: a dataframe that has been cleaned using import_clean() + definitions: a list of derived variables to be evaluated + demographic_covariates: a list of demographic covariates + clinical_covariates: a list of clinical covariates + output_path: filepath to the output folder + filepath: filepath to the output file + + Returns: + .csv file (underlying data) + .png file (line plot) + """ + li_df = [] + for definition in definitions: + df_grouped = ( + df_clean[[definition + "_date", definition]] + .groupby(definition + "_date") + .count() + .reset_index() + .rename(columns={definition + "_date": "date"}) + .set_index("date") + ) + li_df.append(redact_round_table(df_grouped)) + df_all_time = ( + pd.concat(li_df) + .stack() + .reset_index() + .rename(columns={"level_1": "variable", 0: "value"}) + ) + df_all_time["sum"] = df_all_time.groupby("variable", sort=False)["value"].transform( + "sum" + ) + df_all_time["value"] = df_all_time["value"] / df_all_time["sum"] + del li_df + + fig, ax = plt.subplots(figsize=(12, 8)) + fig.autofmt_xdate() + sns.lineplot( + x="date", y="value", hue="variable", data=df_all_time, ax=ax + ).set_title("New records by month") + ax.legend().set_title("") + if len(df_all_time) > 0: + df_all_time.to_csv( + f"output/{output_path}/{grouping}/tables/records_over_time{filepath}_{reg}.csv" + ) + plt.savefig( + f"output/{output_path}/{grouping}/figures/records_over_time{filepath}_{reg}.png" + ) + + for group in demographic_covariates + clinical_covariates: + for definition in definitions: + df_grouped = ( + df_clean[[definition + "_date", definition, group]] + .groupby([definition + "_date", group]) + .count() + .reset_index() + .rename(columns={definition + "_date": "date"}) + .set_index(["date", group]) + ) + df_time = redact_round_table(df_grouped).reset_index() + df_time["sum"] = df_time.groupby(group, sort=False)[definition].transform( + "sum" + ) + df_time[definition] = df_time[definition] / df_time["sum"] * 100 + fig, ax = plt.subplots(figsize=(12, 8)) + fig.autofmt_xdate() + sns.lineplot( + x="date", y=definition, hue=group, data=df_time, ax=ax + ).set_title(f"{definition} recorded by {group} and month") + ax.legend().set_title("") + if len(df_time) > 0: + df_time.to_csv( + f"output/{output_path}/{grouping}/tables/records_over_time_{definition}_{group}{filepath}_{reg}.csv" + ) + plt.savefig( + f"output/{output_path}/{grouping}/figures/records_over_time_{definition}_{group}{filepath}_{reg}.png" + ) + + +def display_heatmap(df_clean, definitions, output_path): + # All with measurement + li_filled = [] + for definition in definitions: + df_temp = df_clean[["patient_id"]].drop_duplicates().set_index("patient_id") + df_temp[definition + "_filled"] = 1 + df_temp = ( + df_clean[["patient_id", definition + "_filled"]] + .drop_duplicates() + .dropna() + .set_index("patient_id") + ) + li_filled.append(df_temp) + + # Prepare data for heatmap input + df_temp2 = pd.concat(li_filled, axis=1) + # Remove list from memory + del li_filled + df_transform = df_temp2.replace(np.nan, 0) + df_dot = redact_round_table(df_transform.T.dot(df_transform)) + + # Create mask to eliminate duplicates in heatmap + mask = np.triu(np.ones_like(df_dot)) + np.fill_diagonal(mask[::1], 0) + + # Draw the heatmap with the mask + fig, ax = plt.subplots(figsize=(12, 8)) + sns.heatmap(df_dot, annot=True, mask=mask, fmt="g", cmap="YlGnBu", vmin=0) + # plt.show() + plt.savefig(f"output/{output_path}/figures/heatmap.png") + + +def simple_sus_crosstab(df_clean, output_path, definitions, grouping, defin, reg): + df_clean[definitions[0]] = df_clean[definitions[0]].fillna(" Unknown") + df_clean[definitions[1]] = df_clean[definitions[1]].fillna(" Unknown") + data_crosstab = pd.crosstab( + df_clean[definitions[0]], df_clean[definitions[1]], margins=False + ) + data_crosstab = redact_round_table(data_crosstab) + data_crosstab.to_csv( + f"output/{output_path}/{grouping}/tables/simple_{defin}_sus_crosstab_{reg}.csv" + ) + + df_clean = df_clean[definitions] + data_crosstab_long = pd.DataFrame( + df_clean.groupby([definitions[0], definitions[1]]).size() + ) + data_crosstab_long = redact_round_table(data_crosstab_long) + data_crosstab_long.to_csv( + f"output/{output_path}/{grouping}/tables/simple_{defin}_sus_crosstab_long_{reg}.csv" + ) + + +# def simple_ctv3_sus_crosstab(df_clean, output_path, grouping, reg): +# df_clean.ethnicity_5 = df_clean.ethnicity_5.fillna(" Unknown") +# df_clean.ethnicity_sus_5 = df_clean.ethnicity_sus_5.fillna(" Unknown") +# data_crosstab = pd.crosstab( +# df_clean.ethnicity_5, df_clean.ethnicity_sus_5, margins=False +# ) +# data_crosstab = redact_round_table(data_crosstab) +# data_crosstab.to_csv( +# f"output/{output_path}/{grouping}/tables/simple_sus_crosstab_{reg}.csv" +# ) + +# df_clean = df_clean[["ethnicity_5", "ethnicity_sus_5"]] +# data_crosstab_long = pd.DataFrame( +# df_clean.groupby(["ethnicity_5", "ethnicity_sus_5"]).size() +# ) +# data_crosstab_long = redact_round_table(data_crosstab_long) +# data_crosstab_long.to_csv( +# f"output/{output_path}/{grouping}/tables/simple_ctv3_sus_crosstab_long_{reg}.csv" +# ) diff --git a/analysis/sus/simple_validation_script_16_sus.py b/analysis/sus/simple_validation_script_16_sus.py new file mode 100644 index 0000000..928a999 --- /dev/null +++ b/analysis/sus/simple_validation_script_16_sus.py @@ -0,0 +1,225 @@ +from lib_phenotype_validation_sus import * + +############################ CONFIGURE OPTIONS HERE ################################ + +# Import file +input_path = "output/extract_16/input_16.feather" + +# Definitions +definitions = ["ethnicity_16", "ethnicity_new_16", "ethnicity_sus_16"] +definitions_new = ["ethnicity_new_16", "ethnicity_sus_16"] +definitions_ctv3 = ["ethnicity_16", "ethnicity_sus_16"] +# Code dictionary +code_dict = { + "imd": { + 0: "Unknown", + 1: "1 Most deprived", + 2: "2", + 3: "3", + 4: "4", + 5: "5 Least deprived", + }, + "ethnicity_sus_16": { + 1: "White_British", + 2: "White_Irish", + 3: "Other_White", + 4: "White_and_Black_Caribbean", + 5: "White_and_Black_African", + 6: "White_and_Asian", + 7: "Other_Mixed", + 8: "Indian", + 9: "Pakistani", + 10: "Bangladeshi", + 11: "Other_Asian", + 12: "Caribbean", + 13: "African", + 14: "Other_Black", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, + "ethnicity_new_16": { + 1: "White_British", + 2: "White_Irish", + 3: "Other_White", + 4: "White_and_Black_Caribbean", + 5: "White_and_Black_African", + 6: "White_and_Asian", + 7: "Other_Mixed", + 8: "Indian", + 9: "Pakistani", + 10: "Bangladeshi", + 11: "Other_Asian", + 12: "Caribbean", + 13: "African", + 14: "Other_Black", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, + "ethnicity_16": { + 1: "White_British", + 2: "White_Irish", + 3: "Other_White", + 4: "White_and_Black_Caribbean", + 5: "White_and_Black_African", + 6: "White_and_Asian", + 7: "Other_Mixed", + 8: "Indian", + 9: "Pakistani", + 10: "Bangladeshi", + 11: "Other_Asian", + 12: "Caribbean", + 13: "African", + 14: "Other_Black", + 15: "Chinese", + 16: "Any_other_ethnic_group", + }, +} + + +# Other variables to include +other_vars = [ + "Pakistani", + "Bangladeshi", + "Other_Asian", + "Caribbean", + "African", + "Other_Black", + "White_and_Black_Caribbean", + "White_and_Black_African", + "White_and_Asian", + "Other_Mixed", + "White_British", + "White_Irish", + "Other_White", + "Chinese", + "Any_other_ethnic_group", +] +other_vars_combined = [x + "_" + y for x in definitions for y in other_vars] + + +# Restrict to registered as of index date +registered = True +reg = "fullset" +if registered == True: + reg = "registered" + +# Dates +dates = False +date_min = "" +date_max = "" +time_delta = "" + +# Min/max range +min_range = 4 +max_range = 200 + +# Null value – could be multiple values in a list [0,'0',NA] +null = [0, "0"] + +# Covariates +demographic_covariates = ["age_band", "sex", "region", "imd"] +clinical_covariates = ["dementia", "diabetes", "hypertension", "learning_disability"] + +# Output filepath +output_path = "sus/simplified_output" +grouping = "16_group" + +########################## SPECIFY ANALYSES TO RUN HERE ############################## + + +def main(): + # combine defintions and other_vars + df_clean = import_clean( + input_path, + definitions, + other_vars_combined, + demographic_covariates, + clinical_covariates, + reg, + null, + date_min, + date_max, + time_delta, + output_path, + grouping, + code_dict, + dates=False, + registered=registered, + dates_check=False, + ) + # Count patients with records + simple_patient_counts( + df_clean, + definitions_new, + reg, + "new_sus", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + ) + + # Count patients by categories + simple_patient_counts( + df_clean, + definitions_new, + reg, + "new_sus", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + categories=True, + ) + simple_patient_counts( + df_clean, + definitions_ctv3, + reg, + "ctv3_sus", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + ) + + # Count patients by categories + simple_patient_counts( + df_clean, + definitions_ctv3, + reg, + "ctv3_sus", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + categories=True, + ) + + simple_sus_crosstab(df_clean, output_path, definitions_new, grouping, "new", reg) + + simple_sus_crosstab(df_clean, output_path, definitions_ctv3, grouping, "ctv3", reg) + # # Latest v most common + # simple_latest_common_comparison( + # df_clean, definitions,reg, other_vars_combined, output_path,grouping, + # ) + # simple_latest_common_comparison( + # df_clean, definitions,reg, other_vars_combined, output_path,grouping, missing_check=False, + # ) + # # State change + # simple_state_change(df_clean, definitions,reg, other_vars_combined, output_path,grouping,) + # # records over time + # records_over_time_perc( + # df_clean, definitions, demographic_covariates, clinical_covariates, output_path, "",grouping,reg + # ) + + +########################## DO NOT EDIT – RUNS SCRIPT ############################## + +if __name__ == "__main__": + main() + +# registered = False +# reg = "fullset" + +# if __name__ == "__main__": +# main() diff --git a/analysis/sus/simple_validation_script_sus.py b/analysis/sus/simple_validation_script_sus.py new file mode 100644 index 0000000..9e6f867 --- /dev/null +++ b/analysis/sus/simple_validation_script_sus.py @@ -0,0 +1,182 @@ +from lib_phenotype_validation_sus import * + +############################ CONFIGURE OPTIONS HERE ################################ + +# Import file +input_path = "output/extract_5/input_5.feather" + +# Definitions +definitions = [ + "ethnicity_5", + "ethnicity_new_5", + "ethnicity_sus_5", +] + +definitions_new = [ + "ethnicity_new_5", + "ethnicity_sus_5", +] + +definitions_ctv3 = [ + "ethnicity_5", + "ethnicity_sus_5", +] + +# Code dictionary +code_dict = { + "imd": { + 0: "Unknown", + 1: "1 Most deprived", + 2: "2", + 3: "3", + 4: "4", + 5: "5 Least deprived", + }, + "ethnicity_new_5": {1: "White", 2: "Mixed", 3: "Asian", 4: "Black", 5: "Other"}, + "ethnicity_5": {1: "White", 2: "Mixed", 3: "Asian", 4: "Black", 5: "Other"}, + "ethnicity_sus_5": {1: "White", 2: "Mixed", 3: "Asian", 4: "Black", 5: "Other"}, +} + +# Other variables to include +other_vars = ["white", "mixed", "asian", "black", "other"] +other_vars_combined_new = [x + "_" + y for x in definitions_new for y in other_vars] +other_vars_combined_ctv3 = [x + "_" + y for x in definitions_ctv3 for y in other_vars] +other_vars_combined = other_vars_combined_new + other_vars_combined_ctv3 +# Restrict to registered as of index date +registered = True +reg = "fullset" +if registered == True: + reg = "registered" + +# Dates +dates = False +date_min = "" +date_max = "" +time_delta = "" + +# Min/max range +min_range = 4 +max_range = 200 + +# Null value – could be multiple values in a list [0,'0',NA] +null = [0, "0"] + +# Covariates +demographic_covariates = ["age_band", "sex", "region", "imd"] +clinical_covariates = ["dementia", "diabetes", "hypertension", "learning_disability"] + +# Output filepath +output_path = "sus/simplified_output" +grouping = "5_group" + +########################## SPECIFY ANALYSES TO RUN HERE ############################## + + +def main(): + # combine defintions and other_vars + df_clean = import_clean( + input_path, + definitions, + other_vars_combined, + demographic_covariates, + clinical_covariates, + reg, + null, + date_min, + date_max, + time_delta, + output_path, + grouping, + code_dict, + dates=False, + registered=registered, + dates_check=False, + ) + # Count patients with records + simple_patient_counts( + df_clean, + definitions_new, + reg, + "new_sus", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + ) + + simple_patient_counts( + df_clean, + definitions_ctv3, + reg, + "ctv3_sus", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + ) + + # Count patients by categories + simple_patient_counts( + df_clean, + definitions_new, + reg, + "new_sus", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + categories=True, + ) + + simple_patient_counts( + df_clean, + definitions_ctv3, + reg, + "ctv3_sus", + demographic_covariates, + clinical_covariates, + output_path, + grouping, + categories=True, + ) + + simple_sus_crosstab(df_clean, output_path, definitions_new, grouping, "new", reg) + + simple_sus_crosstab(df_clean, output_path, definitions_ctv3, grouping, "ctv3", reg) + + # # Latest v most common + # simple_latest_common_comparison( + # df_clean, + # definitions_new, + # reg, + # other_vars_combined_ctv3, + # output_path, + # grouping, + # code_dict, + # ) + + # # State change + # simple_state_change( + # df_clean, + # definitions_new, + # reg, + # other_vars_combined_ctv3, + # output_path, + # grouping, + # ) + # # records over time + # records_over_time_perc( + # df_clean, definitions, demographic_covariates, clinical_covariates, output_path, "",grouping,reg + # ) + + +########################## DO NOT EDIT – RUNS SCRIPT ############################## + +if __name__ == "__main__": + main() + +# registered = False +# reg = "fullset" + +# if __name__ == "__main__": +# main() diff --git a/analysis/time/time_covariate_plots.R b/analysis/time/time_covariate_plots.R new file mode 100644 index 0000000..7c79962 --- /dev/null +++ b/analysis/time/time_covariate_plots.R @@ -0,0 +1,133 @@ +library(tidyverse) +library(scales) +library(readr) +library(ggsci) +library(ggpubr) +library(lubridate) +library(glue) + +demographic_covariates = c("age_band", "sex", "region", "imd") +clinical_covariates = c("dementia", "diabetes", "hypertension", "learning_disability") +covariates =c(demographic_covariates,clinical_covariates) + +fs::dir_create(here::here("output", "time")) + + +for (covar in covariates){ + + input<-read_csv(here::here("output","yearly",glue("measure_ethnicity_{covar}_rate.csv"))) + input<-input %>% mutate(ethnicity_new_5_month = case_when(ethnicity_new_5_month > 7 ~ round(ethnicity_new_5_month/5,0)*5), + population = case_when(population > 7 ~ round(population/5,0)*5), + value = ethnicity_new_5_month / population) + + ifelse(covar %in% clinical_covariates, + input<-input %>% mutate(covariant := + case_when(get(covar) == TRUE ~ "Present", + get(covar)== FALSE ~ "Absent")) + , + input<-input %>% mutate(covariant := + case_when(get(covar) == "F" ~ "Female", + get(covar)== "M" ~ "Male", + get(covar)==0~"Unknown", + get(covar)==1~"1: Most deprived", + get(covar)==5~"5: Least deprived", + T~as.character(get(covar)))) + ) + + + + write_csv(input,here::here("output", "time",glue("{covar}_rate.csv"))) + + counts_plot <-input %>% + ggplot(aes(x=date,y= value,colour=factor(covariant)))+ + geom_line(stat="identity") + + ylim(0, 1) + + scale_x_date(date_labels = "%Y", + breaks = seq.Date(from = as.Date("1900-01-01"), + to = as.Date("2022-01-01"), + by = "5 years")) + + theme_bw()+ + theme(axis.text.x = element_text(angle = 90, vjust=0.5), + panel.grid.minor = element_blank()) + + scale_color_lancet() + + guides(colour=guide_legend(title="")) + + ggsave( + filename = here::here( + "output", + "time", + glue("{covar}_rate.png")), + counts_plot, + dpi = 600, + width = 30, + height = 10, + units = "cm" + ) +} + +eth_5<-c("asian","black","mixed","white","other","month") + +df<-tibble() +for (eth in eth_5){ + + input<-read_csv(here::here("output","yearly",glue("measure_ethnicity_new_5_{eth}_rate.csv"))) + input<- input %>% + rename(N=!!glue("ethnicity_new_5_{eth}")) %>% + mutate(ethnicity=eth) + if (eth == "month"){ + input<- input %>% + mutate(ethnicity = "all") + } + df<-df %>% bind_rows(input) + + +} +df<-df %>% mutate(N = case_when(N > 7 ~ round(N/5,0)*5), + population = case_when(population > 7 ~ round(population/5,0)*5), + value = N / population) +write_csv(df,here::here("output", "time","ethnicity_5_rate.csv")) + +counts_plot <-df %>% + ggplot(aes(x=date,y= value,colour=factor(ethnicity)))+ + geom_line(stat="identity") + + ylim(0, 1) + + scale_x_date(date_labels = "%Y", + breaks = seq.Date(from = as.Date("1900-01-01"), + to = as.Date("2022-01-01"), + by = "5 years")) + + theme_bw()+ + theme(axis.text.x = element_text(angle = 90, vjust=0.5), + panel.grid.minor = element_blank()) + + scale_color_lancet() + + guides(colour=guide_legend(title="")) + +ggsave( + filename = here::here( + "output", + "time", + "ethnicity_rate.png"), + counts_plot, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + + +input<-read_csv(here::here("output","yearly","nulldates","measure_nulldate_rate.csv")) +input<-input %>% mutate(population_living = case_when(population_living > 7 ~ round(population_living/5,0)*5), + population = case_when(population > 7 ~ round(population/5,0)*5), + value = population_living / population) +write_csv(input,here::here("output", "time","nulldate_rate.csv")) + +input<-read_csv(here::here("output","yearly","nulldates","measure_nulldate_age_band_rate.csv")) +input<-input %>% mutate(null_date = case_when(null_date > 7 ~ round(null_date/5,0)*5), + population_living = case_when(population_living > 7 ~ round(population_living/5,0)*5), + value = null_date / population_living) +write_csv(input,here::here("output", "time","nulldate_age_band_rate.csv")) + +input<-read_csv(here::here("output","yearly","nulldates","measure_nulldate_age_band_allpt_rate.csv")) +input<-input %>% mutate(null_date = case_when(null_date > 7 ~ round(null_date/5,0)*5), + population = case_when(population > 7 ~ round(population/5,0)*5), + value = null_date / population) +write_csv(input,here::here("output", "time","nulldate_age_band_allpts_rate.csv")) diff --git a/analysis/time/times.R b/analysis/time/times.R new file mode 100644 index 0000000..d47cf31 --- /dev/null +++ b/analysis/time/times.R @@ -0,0 +1,209 @@ +library(tidyverse) +library(scales) +library(readr) +library(ggsci) +library(ggpubr) +library(lubridate) + +fs::dir_create(here::here("output", "time")) + +input<-arrow::read_feather(here::here("output","extract_time","input_time.feather")) %>% + mutate(ethnicity_new_5_first=case_when(ethnicity_new_5_firstas.Date("2022-12-21")~as.Date("2023-01-01"), + T~as.Date(ethnicity_new_5_first)), + ethnicity_new_5_latest=case_when(ethnicity_new_5_latestas.Date("2022-12-21")~as.Date("2023-01-01"), + T~as.Date(ethnicity_new_5_latest))) + +### add check of dates +datecheck <- input %>% + filter(ethnicity_new_5_latest >= as.Date("2010-01-01") & ethnicity_new_5_latest < as.Date("2011-03-01")) %>% + count(ethnicity_new_5_latest) + +write_csv(datecheck,here::here("output", "time","datecheck.csv")) + + +datecheck2 <- input %>% + mutate(month = substr(ethnicity_new_5_latest,6,7)) %>% + count(month) + +write_csv(datecheck2,here::here("output", "time","datecheck2.csv")) + + +counts_first <- input %>% + group_by(month = lubridate::floor_date(ethnicity_new_5_first, "month")) %>% + count(month) %>% + mutate( + measure = "First") + + + + +counts <- input %>% + group_by(month = floor_date(ethnicity_new_5_latest, "month")) %>% + count(month) %>% + mutate( + measure = "last") %>% + bind_rows(counts_first) %>% + mutate(Date=as_date(month)) %>% + drop_na(Date) %>% + mutate(n = case_when(n>7~round(n/5,0)*5))%>% + ungroup %>% + complete( Date = seq(min(Date,na.rm = T), max(Date,na.rm = T), by = "months"),measure) %>% + select(-month) %>% + replace_na(list(n = 0)) %>% + drop_na + + + + +counts_plot <-counts %>% + ggplot(aes(x=Date,y= n,colour=measure))+ + geom_line(stat="identity") + + ylim(0, max(counts$n,na.rm = T)) + + scale_x_date(date_labels = "%Y", + breaks = seq.Date(from = as.Date("1900-01-01"), + to = as.Date("2022-01-01"), + by = "20 years")) + + theme_bw()+ + theme(axis.text.x = element_text(angle = 90, vjust=0.5), + panel.grid.minor = element_blank()) + + scale_color_lancet() + + guides(colour=guide_legend(title="")) + +ggsave( + filename = here::here( + "output", + "time", + "first_last_plot_month.png"), + counts_plot, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + + +write_csv(counts,here::here("output", "time","across_time_months.csv")) + +counts_first_year <- input %>% + group_by(year = floor_date(ethnicity_new_5_first, "year")) %>% + count(year) %>% + mutate( + measure = "First") + + + + +counts_year <- input %>% + group_by(year = floor_date(ethnicity_new_5_latest, "year")) %>% + count(year) %>% + mutate( + measure = "last") %>% + bind_rows(counts_first_year) %>% + mutate(Date=as_date(year)) %>% + drop_na(Date) %>% + mutate(n = case_when(n>7~round(n/5,0)*5))%>% + ungroup %>% + complete( Date = seq(min(Date,na.rm = T), max(Date,na.rm = T), by = "years"),measure) %>% + select(-year) %>% + replace_na(list(n = 0)) %>% + drop_na + + + +write_csv(counts_year,here::here("output", "time","across_time_years.csv")) + + + + + +counts_plot_year <-counts_year %>% + ggplot(aes(x=Date,y= n,colour=measure))+ + geom_line(stat="identity") + + ylim(0, max(counts$n,na.rm = T)) + + scale_x_date(date_labels = "%Y", + breaks = seq.Date(from = as.Date("1900-01-01"), + to = as.Date("2022-01-01"), + by = "20 years")) + + theme_bw()+ + theme(axis.text.x = element_text(angle = 90, vjust=0.5), + panel.grid.minor = element_blank()) + + scale_color_lancet() + + guides(colour=guide_legend(title="")) + +ggsave( + filename = here::here( + "output", + "time", + "first_last_plot_year.png"), + counts_plot_year, + dpi = 600, + width = 30, + height = 10, + units = "cm" +) + + + +#### by group +demographic_covariates = c("age_band", "sex", "region", "imd") +clinical_covariates = c("dementia", "diabetes", "hypertension", "learning_disability") +covariates =c(demographic_covariates,clinical_covariates) + +df_group <- as.data.frame(NULL) + +for (i in covariates){ + df<-input %>% + group_by(year = floor_date(ethnicity_new_5_latest, "year")) %>% + group_by_at(i) %>% + count(year) %>% + mutate( + Date=as.Date(year)) %>% + rename(subgroup=i) %>% + ungroup() %>% + complete( Date = seq(min(Date,na.rm = T), max(Date,na.rm = T), by = "year"),subgroup) %>% + replace_na(list(n = 0)) %>% + mutate( + group=i, + 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--- a/codelists/codelists.txt +++ b/codelists/codelists.txt @@ -1,11 +1,34 @@ +opensafely/ethnicity-snomed-0removed/2e641f61/ opensafely/ethnicity-uk-categories/516dea7b -user/rohini-mathur/ethnicity_group1/159ff414 -user/rohini-mathur/ethnicity_group2/7c9080de -user/rohini-mathur/ethnicity_group3/63810da9 -user/rohini-mathur/ethnicity_group4/4a719a74 -user/rohini-mathur/ethnicity_group5/3162273f -user/rohini-mathur/ethnicity_group6/1852b40a -user/rohini-mathur/ethnicity_group7/7f4340d4 -user/rohini-mathur/ethnicity_group8/6633cd9f -user/rohini-mathur/ethnicity_group9/4d245a6a -user/rohini-mathur/ethnicity_group10/3414e735 +primis-covid19-vacc-uptake/eth2001/v1/ +primis-covid19-vacc-uptake/non_eth2001/v1/ +primis-covid19-vacc-uptake/eth_notgiptref/v1/ +primis-covid19-vacc-uptake/eth_notstated/v1/ +primis-covid19-vacc-uptake/eth_norecord/v1/ +opensafely/ethnicity/2020-04-27 +primis-covid19-vacc-uptake/ast/v1/ +opensafely/chronic-cardiac-disease-snomed/2020-04-08/ +primis-covid19-vacc-uptake/chd_cov/v1.2.1/ +opensafely/chronic-kidney-disease-snomed/2020-04-14/ +opensafely/chronic-liver-disease-snomed/2020-06-02/ +opensafely/chronic-respiratory-disease-snomed/2020-04-10/ +opensafely/haematological-cancer-snomed/2020-04-15/ +opensafely/lung-cancer-snomed/2020-04-15/ +opensafely/cancer-excluding-lung-and-haematological-snomed/2020-04-15/ +opensafely/dementia-snomed/2020-04-22/ +opensafely/diabetes-snomed/2020-04-15/ +opensafely/housebound/5bc77310/ +opensafely/hypertension-snomed/2020-04-28/ +primis-covid19-vacc-uptake/learndis/v1/ +primis-covid19-vacc-uptake/sev_obesity/v1.2/ +opensafely/learning-disabilities/2020-07-06 +opensafely/systolic-blood-pressure-qof/3572b5fb +opensafely/structured-medication-review-nhs-england/5459205f +opensafely/nhs-england-care-homes-residential-status/3712ef13 +user/anna-schultze/cancer/27f4f62d +user/candrews/other/03b30041 +user/candrews/asian/1cc27376 +user/candrews/black/35d1e6ab +user/candrews/mixed/67f0cd15 +user/candrews/white/0100404b +user/candrews/full_ethnicity_coded/6281e42c \ No newline at end of file diff --git a/codelists/opensafely-cancer-excluding-lung-and-haematological-snomed.csv b/codelists/opensafely-cancer-excluding-lung-and-haematological-snomed.csv new file mode 100644 index 0000000..73c4aaa --- /dev/null +++ b/codelists/opensafely-cancer-excluding-lung-and-haematological-snomed.csv @@ -0,0 +1,5892 @@ +id,name,active,notes +94632009,Secondary malignant neoplasm of thymus (disorder),y,direct mapping +18105004,"Endometrioid adenofibroma, malignant (morphologic abnormality)",y,direct mapping +269533000,Carcinoma of colon (disorder),y,direct mapping +110458000,Malignant odontogenic ghost cell tumor (morphologic abnormality),y,direct mapping +363510005,Malignant tumor of large intestine (disorder),y,direct mapping +94453007,Secondary malignant neoplasm of orbit proper (disorder),y,direct mapping +448668007,Malignant neoplasm of mandible (disorder),y,direct mapping +94066004,Primary malignant neoplasm of sphenoid bone (disorder),y,direct mapping +363381003,Malignant tumor of sublingual gland (disorder),y,direct mapping +285613005,Metastasis to liver of unknown primary (disorder),y,direct mapping +363450006,Malignant tumor of foreskin (disorder),y,direct mapping +269463006,Malignant tumor of middle ear and mastoid (disorder),y,direct mapping +363353009,Malignant tumor of gallbladder (disorder),y,direct mapping +276803003,Adenocarcinoma of esophagus (disorder),y,direct mapping +285312008,Carcinoma of sigmoid colon (disorder),y,direct mapping +109874003,Overlapping malignant neoplasm of male genital organs (disorder),y,direct mapping +187641009,Malignant tumor of frenum linguae (disorder),y,direct mapping +363423001,Malignant tumor of nasal septum (disorder),y,direct mapping +188209005,Malignant neoplasm of vaginal vault (disorder),y,direct mapping +30289006,Endometrioid carcinoma (morphologic abnormality),y,direct mapping +315009006,Metastasis from malignant tumor of tongue (disorder),y,direct mapping +1090901000000102,Malignant neoplasm of peripheral nerves of trunk (disorder),y,direct mapping +372095001,Malignant neoplasm of male breast (disorder),y,direct mapping +254856004,Undifferentiated carcinoma of ovary (disorder),y,direct mapping +372142002,Carcinoma of pancreas (disorder),y,direct mapping +274088005,Secondary malignant neoplasm of unknown site (disorder),y,direct mapping +19756007,"Gastrinoma, malignant (morphologic abnormality)",y,direct mapping +285618001,Metastasis to bone of unknown primary (disorder),y,direct mapping +255017003,Adenocarcinoma of non-pigmented epithelium of ciliary body (disorder),y,direct mapping +363437005,Malignant tumor of myocardium (disorder),y,direct mapping +1090131000000106,Secondary malignant neoplasm of anterior cervical lymph nodes (disorder),y,direct mapping +33176006,"Hemangioendothelioma, malignant (morphologic abnormality)",y,direct mapping +269473008,Secondary malignant neoplasm of respiratory and digestive systems (disorder),y,direct mapping +109391009,Kaposi's sarcoma of lymph nodes (disorder),y,direct mapping +363376007,Malignant tumor of base of tongue (disorder),y,direct mapping +59367005,Adenosquamous carcinoma (morphologic abnormality),y,direct mapping +285619009,Metastasis to vertebral column of unknown primary (disorder),y,direct mapping +255091001,Malignant neoplasm of metacarpal bones (disorder),y,direct mapping +93798006,Primary malignant neoplasm of femur (disorder),y,direct mapping +44769000,"Choriocarcinoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +188195000,Malignant neoplasm of isthmus of uterine body (disorder),y,direct mapping +187613005,"Malignant neoplasm of lower lip, buccal aspect (disorder)",y,direct mapping +109385007,Kaposi's sarcoma (disorder),y,direct mapping +708921005,Carcinoma of central portion of breast (disorder),y,direct mapping +254844000,Malignant phyllodes tumor of breast (disorder),y,direct mapping +254474002,Malignant tumor of nasal skeleton (disorder),y,direct mapping +363473003,Malignant neoplasm of brainstem (disorder),y,direct mapping +187994003,Malignant neoplasm of connective and soft tissue of forearm (disorder),y,direct mapping +253001006,Merkel cell carcinoma (disorder),y,direct mapping +188003000,Malignant neoplasm of connective and soft tissue of lower leg (disorder),y,direct mapping +189857001,Choriocarcinoma combined with teratoma (morphologic abnormality),y,direct mapping +94580002,Secondary malignant neoplasm of small intestine (disorder),y,direct mapping +424413001,Sarcoma (disorder),y,direct mapping +94313005,Secondary malignant neoplasm of gastrointestinal tract (disorder),y,direct mapping +94661005,Secondary malignant neoplasm of urethra (disorder),y,direct mapping +93217003,Malignant melanoma of skin of cheek (disorder),y,direct mapping +275394001,Carcinoma ventral surface of tongue (disorder),y,direct mapping +188454009,Secondary malignant neoplasm of skin of head (disorder),y,direct mapping +188188009,Choriocarcinoma (disorder),y,direct mapping +188002005,Malignant neoplasm of connective and soft tissue of popliteal space (disorder),y,direct mapping +188044004,Malignant melanoma of scalp AND/OR neck (disorder),y,direct mapping +363478007,Malignant tumor of thyroid gland (disorder),y,direct mapping +94600009,Secondary malignant neoplasm of spinal cord (disorder),y,direct mapping +269516007,Tongue carcinoma (disorder),y,direct mapping +65140001,Periosteal fibrosarcoma (morphologic abnormality),y,direct mapping +68880006,Papillary mucinous cystadenocarcinoma (morphologic abnormality),y,direct mapping +276809004,Early gastric cancer (disorder),y,direct mapping +89740008,Lobular carcinoma (morphologic abnormality),y,direct mapping +276797002,Malignant tumor of fibrous tissue (disorder),y,direct mapping +413737006,Cancer hospital treatment completed (situation),y,direct mapping +254888007,Adenosquamous carcinoma of cervix (disorder),y,direct mapping +109384006,"Overlapping malignant neoplasm of heart, mediastinum and pleura (disorder)",y,direct mapping +94112009,Primary malignant neoplasm of ulna (disorder),y,direct mapping +255110003,Adenocarcinoma of bladder (disorder),y,direct mapping +54734006,Sebaceous adenocarcinoma (morphologic abnormality),y,direct mapping +372131006,Malignant neoplasm of upper limb bones and scapula (disorder),y,direct mapping +363404008,Malignant tumor of jejunum (disorder),y,direct mapping +188016000,Malignant neoplasm of connective and soft tissue of abdominal wall (disorder),y,direct mapping +314997007,Metastasis from malignant tumor of rectum (disorder),y,direct mapping +269544008,Carcinoma of the rectosigmoid junction (disorder),y,direct mapping +255118005,Secondary lymphangitic carcinoma (disorder),y,direct mapping +57622002,"Thecoma, malignant (morphologic abnormality)",y,direct mapping +255088001,Malignant tumor of exocrine pancreas (disorder),y,direct mapping +188219004,Malignant tumor of undescended testis (disorder),y,direct mapping +94554003,Secondary malignant neoplasm of skin of face (disorder),y,direct mapping +363518003,Malignant tumor of kidney (disorder),y,direct mapping +188445006,Secondary malignant neoplasm of retroperitoneum and peritoneum (disorder),y,direct mapping +255012009,Malignant melanoma of iris (disorder),y,direct mapping +93975006,Primary malignant neoplasm of pubis (disorder),y,direct mapping +188032002,Malignant melanoma of ear and/or external auditory canal (disorder),y,direct mapping +109876001,Primary malignant neoplasm of descended testis (disorder),y,direct mapping +188005007,Malignant neoplasm of connective and soft tissue of toe (disorder),y,direct mapping +254974009,Malignant tumor of optic nerve sheath (disorder),y,direct mapping +363441009,Malignant tumor of soft tissue of neck (disorder),y,direct mapping +269467007,Malignant neoplasm of hand bones (disorder),y,direct mapping +85654004,Medullary carcinoma with lymphoid stroma (morphologic abnormality),y,direct mapping +363422006,Malignant tumor of nasal cavity (disorder),y,direct mapping +363427000,Malignant tumor of frontal sinus (disorder),y,direct mapping +363372009,Malignant tumor of vermilion border of upper lip (disorder),y,direct mapping +188312005,Malignant neoplasm of cerebral dura mater (disorder),y,direct mapping +94597008,Secondary malignant neoplasm of spermatic cord (disorder),y,direct mapping +285603002,Metastasis to bronchus of unknown primary (disorder),y,direct mapping +21708004,"Osteosarcoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +187957007,Malignant neoplasm of coccygeal vertebra (disorder),y,direct mapping +405945003,Malignant neoplasm of metatarsal bone of foot (disorder),y,direct mapping +126885006,Neoplasm of bladder (disorder),y,direct mapping +93841009,Primary malignant neoplasm of intrathoracic organs (disorder),y,direct mapping +94668004,Secondary malignant neoplasm of vagina (disorder),y,direct mapping +39005004,Medulloepithelioma (morphologic abnormality),y,direct mapping +254424004,Carcinoma of upper gum (disorder),y,direct mapping +314962005,Local recurrence of malignant tumor of gallbladder (disorder),y,direct mapping +187635002,Malignant neoplasm of midline of tongue (disorder),y,direct mapping +46710009,Esthesioneurocytoma (morphologic abnormality),y,direct mapping +254454009,Carcinoma of lower labial sulcus (disorder),y,direct mapping +82591005,Paget's disease and infiltrating duct carcinoma of breast (morphologic abnormality),y,direct mapping +363382005,Malignant tumor of gum (disorder),y,direct mapping +188010006,Malignant neoplasm of connective and soft tissue of axilla (disorder),y,direct mapping +188023004,Malignant neoplasm of connective and soft tissue of sacrum or coccyx (disorder),y,direct mapping +1090961000000103,Malignant neoplasm of soft tissues of lower limb (disorder),y,direct mapping +278411006,Primary intra-osseous carcinoma (morphologic abnormality),y,direct mapping +188075008,Malignant melanoma of foot (disorder),y,direct mapping +255121007,Carcinomatosis of peritoneal cavity (disorder),y,direct mapping +12690005,Fibroblastic osteosarcoma (morphologic abnormality),y,direct mapping +428061005,Malignant neoplasm of brain (disorder),y,direct mapping +314999005,Metastasis from malignant tumor of pancreas (disorder),y,direct mapping +188060000,Malignant melanoma of shoulder (disorder),y,direct mapping +187631006,Malignant neoplasm of base of tongue dorsal surface (disorder),y,direct mapping +716318002,Lynch syndrome (disorder),y,direct mapping +14990007,"Chondrosarcoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +956331000000107,Malignant melanoma stage IA (finding),y,direct mapping +187952001,"Malignant neoplasm of pelvic bones, sacrum and coccyx (disorder)",y,direct mapping +188313000,Malignant neoplasm of cerebral arachnoid mater (disorder),y,direct mapping +62621002,Pigmented dermatofibrosarcoma protuberans (morphologic abnormality),y,direct mapping +416669000,Invasive hydatidiform mole (disorder),y,direct mapping +84664004,"Hemangiopericytoma, malignant (morphologic abnormality)",y,direct mapping +254988008,Adenocarcinoma of lacrimal gland (disorder),y,direct mapping +254855000,Mixed epithelial tumor of ovary (disorder),y,direct mapping +285640005,Metastasis to bladder of unknown primary (disorder),y,direct mapping +363395000,Malignant tumor of vallecula (disorder),y,direct mapping +187741001,Malignant tumor of fundus of stomach (disorder),y,direct mapping +33681003,Osteosarcoma in Paget's disease of bone (morphologic abnormality),y,direct mapping +254986007,Malignant tumor of peripheral nerve (disorder),y,direct mapping +363469001,Malignant neoplasm of parietal lobe (disorder),y,direct mapping +94665001,Secondary malignant neoplasm of uterus (disorder),y,direct mapping +9801004,Spindle cell sarcoma (morphologic abnormality),y,direct mapping +10069009,"Giant cell tumor of bone, malignant (morphologic abnormality)",y,direct mapping +286894008,"Carcinoma of breast - lower, inner quadrant (disorder)",y,direct mapping +188208002,Malignant neoplasm of Gartner's duct (disorder),y,direct mapping +4079000,Mucoepidermoid carcinoma (morphologic abnormality),y,direct mapping +80061003,Oligodendroblastoma (morphologic abnormality),y,direct mapping +254563009,Carcinoma of lesser curve of stomach (disorder),y,direct mapping +363393007,Malignant tumor of tonsil (disorder),y,direct mapping +303012000,Malignant tumor of posterior wall of hypopharynx (disorder),y,direct mapping +109911004,Overlapping malignant neoplasm of brain and other parts of the central nervous system (disorder),y,direct mapping +363392002,Malignant tumor of oropharynx (disorder),y,direct mapping +88400008,"Tumor cells, malignant (morphologic abnormality)",y,direct mapping +254887002,Adenocarcinoma of cervix (disorder),y,direct mapping +254889004,Carcinoma of cervix stage 0 (disorder),y,direct mapping +109842005,Intrahepatic bile duct carcinoma (disorder),y,direct mapping +3102004,"Oligodendroglioma, anaplastic (morphologic abnormality)",y,direct mapping +187932002,Malignant neoplasm of humerus (disorder),y,direct mapping +255115008,Kaposi's sarcoma of cornea (disorder),y,direct mapping +312113007,Carcinoma of descending colon (disorder),y,direct mapping +285609003,Metastasis to small intestine of unknown primary (disorder),y,direct mapping +188366002,Malignant neoplasm of abdomen (disorder),y,direct mapping +956471000000103,Malignant melanoma stage IIIC (finding),y,direct mapping +54666007,Paget's disease and intraductal carcinoma of breast (morphologic abnormality),y,direct mapping +363482009,Malignant tumor of pituitary gland (disorder),y,direct mapping +188211001,Malignant neoplasm of greater vestibular (Bartholin's) gland (disorder),y,direct mapping +363508008,Malignant tumor of intestine (disorder),y,direct mapping +93655004,Malignant melanoma of skin (disorder),y,direct mapping +35262004,Gliosarcoma (morphologic abnormality),y,direct mapping +255029007,Papillary thyroid carcinoma (disorder),y,direct mapping +187808008,Malignant neoplasm of specified parts of peritoneum (disorder),y,direct mapping +75931002,Malignant melanoma in giant pigmented nevus (morphologic abnormality),y,direct mapping +188006008,Malignant neoplasm of connective and soft tissue of great toe (disorder),y,direct mapping +363481002,Malignant tumor of parathyroid gland (disorder),y,direct mapping +15176003,Adenocarcinoma with squamous metaplasia (morphologic abnormality),y,direct mapping +342571000000109,Siewert type I adenocarcinoma (disorder),y,direct mapping +408645001,Adenocarcinoma of large intestine (disorder),y,direct mapping +430556008,Malignant neoplasm of genital structure (disorder),y,direct mapping +94298004,Secondary malignant neoplasm of female genital organ (disorder),y,direct mapping +363374005,Malignant tumor of commissure of lip (disorder),y,direct mapping +449224009,Malignant neoplasm of anterior mediastinum (disorder),y,direct mapping +94142007,Primary malignant neoplasm of vomer (disorder),y,direct mapping +254893005,Carcinoma of vagina (disorder),y,direct mapping +93786001,Primary malignant neoplasm of ethmoid bone (disorder),y,direct mapping +254851009,Mucinous cystadenocarcinoma of ovary (disorder),y,direct mapping +363462005,Malignant tumor of orbit (disorder),y,direct mapping +94402006,Secondary malignant neoplasm of male genital organ (disorder),y,direct mapping +363435002,Malignant tumor of heart (disorder),y,direct mapping +254824006,Malignant tumor of mesothelial tissue (disorder),y,direct mapping +363452003,Malignant tumor of epididymis (disorder),y,direct mapping +59238007,Epithelioid sarcoma (morphologic abnormality),y,direct mapping +276810009,Late gastric cancer (disorder),y,direct mapping +363377003,Malignant tumor of lingual tonsil (disorder),y,direct mapping +754371000000109,Grade 3 (Stage pTa) papillary urothelial/transitional cell carcinoma (morphologic abnormality),y,direct mapping +255056009,Malignant tumor of head and/or neck (disorder),y,direct mapping +28351005,Myxosarcoma (morphologic abnormality),y,direct mapping +372097009,Malignant neoplasm of endocervix (disorder),y,direct mapping +183649005,Combined therapy follow-up (procedure),y,direct mapping +314998002,Metastasis from malignant tumor of colon (disorder),y,direct mapping +254843006,Familial cancer of breast (disorder),y,direct mapping +269515006,Carcinoma of lip (disorder),y,direct mapping +449377002,Malignant neoplasm of pelvic peritoneum (disorder),y,direct mapping +64000002,Skin appendage carcinoma (morphologic abnormality),y,direct mapping +94347008,Secondary malignant neoplasm of intra-abdominal lymph nodes (disorder),y,direct mapping +187614004,Malignant tumor of frenum of lower lip (disorder),y,direct mapping +1090821000000101,Malignant neoplasm of bone and articular cartilage (disorder),y,direct mapping +76594008,Dermatofibrosarcoma (morphologic abnormality),y,direct mapping +286889008,Carcinoma of upper limb bones/scapula (disorder),y,direct mapping +363453008,Malignant tumor of spermatic cord (disorder),y,direct mapping +285612000,Metastasis to rectum of unknown primary (disorder),y,direct mapping +53654007,Fibrosarcoma (morphologic abnormality),y,direct mapping +5257006,Follicular adenocarcinoma (morphologic abnormality),y,direct mapping +109835005,Overlapping malignant neoplasm of esophagus (disorder),y,direct mapping +363439008,Malignant tumor of soft tissue of head (disorder),y,direct mapping +285615003,Metastasis to spleen of unknown primary (disorder),y,direct mapping +271943005,Carcinoma of base of tongue (disorder),y,direct mapping +93997008,Primary malignant neoplasm of scapula (disorder),y,direct mapping +188242006,Malignant neoplasm of anterior wall of urinary bladder (disorder),y,direct mapping +363483004,Malignant tumor of pineal gland (disorder),y,direct mapping +94398002,Secondary malignant neoplasm of lymph nodes of upper limb (disorder),y,direct mapping +30383009,"Mesothelioma, biphasic, malignant (morphologic abnormality)",y,direct mapping +254841008,Cancer en cuirasse (disorder),y,direct mapping +307216009,Perforated carcinoma of esophagus (disorder),y,direct mapping +312112002,Carcinoma of transverse colon (disorder),y,direct mapping +189919000,Primitive polar spongioblastoma (morphologic abnormality),y,direct mapping +187683004,Malignant neoplasm of glossoepiglottic fold (disorder),y,direct mapping +314996003,Metastasis from malignant tumor of kidney (disorder),y,direct mapping +39274007,Balloon cell melanoma (morphologic abnormality),y,direct mapping +93661001,Primary malignant neoplasm of acromion (disorder),y,direct mapping +187846001,Malignant neoplasm of thyroid cartilage (disorder),y,direct mapping +187967002,Malignant neoplasm of calcaneum (disorder),y,direct mapping +274904007,Carcinoid tumor - argentaffin (morphologic abnormality),y,direct mapping +363360003,Malignant tumor of anterior two-thirds of tongue (disorder),y,direct mapping +254876005,Endodermal sinus tumor of ovary (disorder),y,direct mapping +71447003,"Paget's disease, extramammary (except Paget's disease of bone) (morphologic abnormality)",y,direct mapping +188040008,Malignant melanoma of forehead (disorder),y,direct mapping +16034002,Clark melanoma level 5 (finding),y,direct mapping +94659001,Secondary malignant neoplasm of ureter (disorder),y,direct mapping +39781001,Primitive neuroectodermal tumor (morphologic abnormality),y,direct mapping +187977000,Malignant neoplasm of fifth metatarsal bone (disorder),y,direct mapping +28558000,Villous adenocarcinoma (morphologic abnormality),y,direct mapping +255111004,Squamous cell carcinoma of bladder (disorder),y,direct mapping +420524008,Kaposi's sarcoma associated with acquired immunodeficiency syndrome (disorder),y,direct mapping +363369002,Carcinoma of tail of pancreas (disorder),y,direct mapping +188055004,Malignant melanoma of umbilicus (disorder),y,direct mapping +76060004,Esthesioneuroblastoma (morphologic abnormality),y,direct mapping +721629005,Linitis plastica of stomach (disorder),y,direct mapping +110457005,Angiomyoliposarcoma (morphologic abnormality),y,direct mapping +254520006,Malignant tumor of infrahyoid epiglottis (disorder),y,direct mapping +307502000,Squamous cell carcinoma of mouth (disorder),y,direct mapping +956551000000106,Malignant melanoma stage IV M1c (finding),y,direct mapping +78838008,Pleomorphic xanthoastrocytoma (morphologic abnormality),y,direct mapping +188287005,Malignant neoplasm of thalamus (disorder),y,direct mapping +310504009,Primary malignant neoplasm of unknown site (disorder),y,direct mapping +94134006,Primary malignant neoplasm of ventral surface of tongue (disorder),y,direct mapping +109841003,Liver cell carcinoma (disorder),y,direct mapping +1090921000000106,Malignant neoplasm of jaw (disorder),y,direct mapping +372099007,Malignant neoplasm of exocervix (disorder),y,direct mapping +187843009,Malignant neoplasm of arytenoid cartilage (disorder),y,direct mapping +398670003,Pigmented dermatofibrosarcoma protuberans of skin (disorder),y,direct mapping +404037002,Malignant peripheral nerve sheath tumor (disorder),y,direct mapping +32512003,"Extra-adrenal paraganglioma, malignant (morphologic abnormality)",y,direct mapping +188020001,Malignant neoplasm of connective and soft tissue of buttock (disorder),y,direct mapping +253056006,Malignant lymphangioma (morphologic abnormality),y,direct mapping +254408000,Malignant tumor of anterior two-thirds of tongue - lateral margin (disorder),y,direct mapping +188264002,Malignant tumor of iris (disorder),y,direct mapping +94217008,Secondary malignant neoplasm of bone marrow (disorder),y,direct mapping +93681000,Primary malignant neoplasm of areola of male breast (disorder),y,direct mapping +956371000000109,Malignant melanoma stage IIA (finding),y,direct mapping +1556006,Clark melanoma level 4 (finding),y,direct mapping +109843000,Hepatoblastoma (disorder),y,direct mapping +363354003,Malignant tumor of cervix (disorder),y,direct mapping +254896002,Malignant melanoma of vulva (disorder),y,direct mapping +314974009,Local recurrence of malignant tumor of soft tissue (disorder),y,direct mapping +187769009,Primary carcinoma of liver (disorder),y,direct mapping +276420005,Malignant tumor of corpus cavernosum (disorder),y,direct mapping +70555003,"Endometrial stromal sarcoma, high grade (morphologic abnormality)",y,direct mapping +254389005,Carcinoma of vermilion border of upper lip (disorder),y,direct mapping +363440005,Malignant tumor of soft tissue of face (disorder),y,direct mapping +363401000,Malignant tumor of pyriform fossa (disorder),y,direct mapping +255021005,Malignant melanoma of choroid (disorder),y,direct mapping +1090991000000109,Malignant neoplasm of soft tissues of lower leg (disorder),y,direct mapping +94381002,Secondary malignant neoplasm of liver (disorder),y,direct mapping +22694002,Adenocarcinoma with apocrine metaplasia (morphologic abnormality),y,direct mapping +314418005,Leukemic infiltrate of retina (disorder),y,direct mapping +94634005,Secondary malignant neoplasm of thyroid gland (disorder),y,direct mapping +52040006,Infantile fibrosarcoma (morphologic abnormality),y,direct mapping +254987003,Adenoid cystic carcinoma of lacrimal gland (disorder),y,direct mapping +73676002,Peripheral neuroectodermal tumor (morphologic abnormality),y,direct mapping +32968003,Inflammatory carcinoma (morphologic abnormality),y,direct mapping +188065005,Malignant melanoma of thumb (disorder),y,direct mapping +42194009,"Brenner tumor, malignant (morphologic abnormality)",y,direct mapping +363346000,Malignant neoplastic disease (disorder),y,direct mapping +1090291000000102,Malignant neoplasm of prepylorus of stomach (disorder),y,direct mapping +93870000,Malignant neoplasm of liver (disorder),y,direct mapping +307576001,Osteosarcoma of bone (disorder),y,direct mapping +187917009,Malignant neoplasm of thoracic vertebra (disorder),y,direct mapping +363413005,Malignant tumor of splenic flexure (disorder),y,direct mapping +188324003,"Malignant neoplasm of peripheral nerves of lower limb, including hip (disorder)",y,direct mapping +94663008,Secondary malignant neoplasm of urinary system (disorder),y,direct mapping +187942000,Malignant neoplasm of carpal bone - trapezoid (disorder),y,direct mapping +285642002,Metastasis to eye of unknown primary (disorder),y,direct mapping +58477004,Infiltrating ductular carcinoma (morphologic abnormality),y,direct mapping +53968002,Olfactory neurogenic tumor (morphologic abnormality),y,direct mapping +187794005,Malignant tumor of Islets of Langerhans (disorder),y,direct mapping +63634009,"Glioblastoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +43296007,Round cell liposarcoma (morphologic abnormality),y,direct mapping +44529004,Giant cell glioblastoma (morphologic abnormality),y,direct mapping +187881004,"Malignant neoplasm of thymus, heart and mediastinum (disorder)",y,direct mapping +60718004,Dysgerminoma (morphologic abnormality),y,direct mapping +188250002,Malignant tumor of kidney parenchyma (disorder),y,direct mapping +281564008,Pelvic neuroblastoma (disorder),y,direct mapping +302847003,Rhabdomyosarcoma (disorder),y,direct mapping +45881000,Carcinoma simplex (morphologic abnormality),y,direct mapping +21165006,Clark melanoma level 3 (finding),y,direct mapping +363514001,Malignant tumor of female genital organ (disorder),y,direct mapping +12943006,Polar spongioblastoma (morphologic abnormality),y,direct mapping +188049009,Malignant melanoma of axilla (disorder),y,direct mapping +254465004,Carcinoma of submandibular gland (disorder),y,direct mapping +314964006,Local recurrence of malignant tumor of pancreas (disorder),y,direct mapping +275490009,Carcinoma of tongue base - dorsal surface (disorder),y,direct mapping +187950009,Malignant neoplasm of phalanges of hand (disorder),y,direct mapping +188252005,Malignant tumor of renal calyx (disorder),y,direct mapping +188471005,Secondary malignant neoplasm of epididymis AND vas deferens (disorder),y,direct mapping +255127006,Local tumor spread (disorder),y,direct mapping +278433008,Malignant infiltration of soft tissue (disorder),y,direct mapping +69317001,Kupffer cell sarcoma (morphologic abnormality),y,direct mapping +1090951000000101,Malignant neoplasm of supraclavicular fossa (disorder),y,direct mapping +254870004,Choriocarcinoma of ovary (disorder),y,direct mapping +188062008,Malignant melanoma of forearm (disorder),y,direct mapping +18854008,"Struma ovarii, malignant (morphologic abnormality)",y,direct mapping +188244007,Malignant tumor of bladder neck (disorder),y,direct mapping +41919003,Juvenile carcinoma of the breast (morphologic abnormality),y,direct mapping +286902000,Secondary carcinoma of gastrointestinal tract (disorder),y,direct mapping +285432005,Carcinoma of cervix (disorder),y,direct mapping +187991006,Malignant neoplasm of connective and soft tissue of upper limb and shoulder (disorder),y,direct mapping +314408000,Leukemic infiltrate of choroid (disorder),y,direct mapping +448868009,Malignant neoplasm of lateral wall of oropharynx (disorder),y,direct mapping +94360002,Secondary malignant neoplasm of kidney (disorder),y,direct mapping +235966007,Cystadenocarcinoma of pancreas (disorder),y,direct mapping +363365008,Malignant tumor of soft tissue of thorax (disorder),y,direct mapping +274087000,Malignant melanoma of eye (disorder),y,direct mapping +76909002,Ewing's sarcoma (morphologic abnormality),y,direct mapping +88591002,Teratoid medulloepithelioma (morphologic abnormality),y,direct mapping +254435009,Carcinoma of soft palate (disorder),y,direct mapping +11073003,Mixed liposarcoma (morphologic abnormality),y,direct mapping +254513004,Malignant tumor of posterior commissure (disorder),y,direct mapping +956451000000107,Malignant melanoma stage IIIB (finding),y,direct mapping +372011009,Malignant tumor of soft tissue of upper limb (disorder),y,direct mapping +94602001,Secondary malignant neoplasm of vertebral column (disorder),y,direct mapping +281565009,Paraspinal neuroblastoma (disorder),y,direct mapping +269581007,Malignant melanoma of lower limb (disorder),y,direct mapping +449096009,Malignant neoplasm of respiratory system (disorder),y,direct mapping +286893002,"Carcinoma of breast - upper, inner quadrant (disorder)",y,direct mapping +363388009,Malignant tumor of soft palate (disorder),y,direct mapping +363400004,Malignant tumor of postcricoid region (disorder),y,direct mapping +813671000000107,Secondary malignant neoplasm of liver and intrahepatic bile duct (disorder),y,direct mapping +363426009,Malignant tumor of ethmoid sinus (disorder),y,direct mapping +285639008,Metastasis to kidney of unknown primary (disorder),y,direct mapping +188289008,Malignant neoplasm of hippocampus (disorder),y,direct mapping +94275007,Secondary malignant neoplasm of duodenum (disorder),y,direct mapping +254849005,Malignant epithelial tumor of ovary (disorder),y,direct mapping +254983004,Malignant tumor of spinal nerve and sheath (disorder),y,direct mapping +5052009,Merkel cell carcinoma (morphologic abnormality),y,direct mapping +278046008,Sarcoma of bladder (disorder),y,direct mapping +187978005,Malignant neoplasm of phalanges of foot (disorder),y,direct mapping +254398008,Carcinoma of frenum of upper lip (disorder),y,direct mapping +115223002,Nevus AND/OR melanoma (morphologic abnormality),y,direct mapping +363373004,Malignant tumor of vermilion border of lower lip (disorder),y,direct mapping +115241005,Neuroepitheliomatous neoplasm (morphologic abnormality),y,direct mapping +188017009,Malignant neoplasm of connective and soft tissues of lumbar spine (disorder),y,direct mapping +29370006,"Pheochromocytoma, malignant (morphologic abnormality)",y,direct mapping +31396002,Goblet cell carcinoid (morphologic abnormality),y,direct mapping +254612002,Carcinoma of endocrine pancreas (disorder),y,direct mapping +187803004,Malignant neoplasm of perinephric tissue (disorder),y,direct mapping +255191003,Localized malignant reticulohistiocytoma (disorder),y,direct mapping +109392002,Kaposi's sarcoma of multiple organs (disorder),y,direct mapping +187999008,Malignant neoplasm of connective and soft tissue of hip and lower limb (disorder),y,direct mapping +9294008,Spermatocytic seminoma (morphologic abnormality),y,direct mapping +314965007,Local recurrence of malignant tumor of colon (disorder),y,direct mapping +1090141000000102,Secondary malignant neoplasm of superficial cervical lymph nodes (disorder),y,direct mapping +285616002,Metastasis to peritoneum of unknown primary (disorder),y,direct mapping +93799003,Primary malignant neoplasm of fibula (disorder),y,direct mapping +50542000,Clark melanoma level 2 (finding),y,direct mapping +276804009,Squamous cell carcinoma of esophagus (disorder),y,direct mapping +315058005,Hereditary nonpolyposis colon cancer (disorder),y,direct mapping +187666008,Malignant neoplasm of junction of hard and soft palate (disorder),y,direct mapping +187973001,Malignant neoplasm of first metatarsal bone (disorder),y,direct mapping +313248004,Malignant melanoma of chest wall (disorder),y,direct mapping +188029000,Kaposi's sarcoma of soft tissue (disorder),y,direct mapping +187906008,Malignant neoplasm of orbital bone (disorder),y,direct mapping +363357005,Malignant tumor of ill-defined site (disorder),y,direct mapping +187624007,Malignant neoplasm of overlapping lesion of lip (disorder),y,direct mapping +280959007,Malignant tumor of lacrimal drainage structure (disorder),y,direct mapping +24007003,Clear cell sarcoma of kidney (morphologic abnormality),y,direct mapping +363406005,Malignant neoplasm of colon (disorder),y,direct mapping +94623007,Secondary malignant neoplasm of testis (disorder),y,direct mapping +40244008,"Spindle cell melanoma, type B (morphologic abnormality)",y,direct mapping +61217001,Hutchinson's melanotic freckle (morphologic abnormality),y,direct mapping +93763008,Primary malignant neoplasm of common bile duct (disorder),y,direct mapping +363447008,Malignant neoplasm of labia minora (disorder),y,direct mapping +428100006,Malignant neoplasm of thoracic cavity structure (disorder),y,direct mapping +363474009,Malignant neoplasm of cerebral meninges (disorder),y,direct mapping +314969001,Local recurrence of malignant tumor of prostate (disorder),y,direct mapping +254437001,Squamous cell carcinoma of buccal mucosa (disorder),y,direct mapping +255123005,Metastasis to nervous system and eye (disorder),y,direct mapping +254425003,Carcinoma of lower gum (disorder),y,direct mapping +188322004,"Malignant neoplasm of peripheral nerves of head, face and neck (disorder)",y,direct mapping +363470000,Malignant neoplasm of occipital lobe (disorder),y,direct mapping +94611001,Secondary malignant neoplasm of submental lymph nodes (disorder),y,direct mapping +371973000,Malignant neoplasm of uterus (disorder),y,direct mapping +314991008,Metastasis from malignant tumor of adrenal gland (disorder),y,direct mapping +15674004,Serous surface papillary carcinoma (morphologic abnormality),y,direct mapping +254840009,Inflammatory carcinoma of breast (disorder),y,direct mapping +94603006,Secondary malignant neoplasm of spleen (disorder),y,direct mapping +21968007,"Papillary carcinoma, follicular variant (morphologic abnormality)",y,direct mapping +307593001,Carcinomatosis (disorder),y,direct mapping +448233000,Malignant neoplasm of urinary organ (disorder),y,direct mapping +82267002,"Malignant tumor, small cell type (morphologic abnormality)",y,direct mapping +326072005,Carcinoma of head of pancreas (disorder),y,direct mapping +416842003,Malignant sacral teratoma (disorder),y,direct mapping +314990009,Metastasis from malignant tumor of bone (disorder),y,direct mapping +94365007,Secondary malignant neoplasm of large intestine (disorder),y,direct mapping +363386008,Malignant tumor of buccal mucosa (disorder),y,direct mapping +363385007,Malignant tumor of floor of mouth (disorder),y,direct mapping +59583009,Embryonal sarcoma (morphologic abnormality),y,direct mapping +56422000,"Synovial sarcoma, epithelioid cell (morphologic abnormality)",y,direct mapping +281566005,Abdominothoracic neuroblastoma (disorder),y,direct mapping +187688008,Malignant tumor of posterior wall of oropharynx (disorder),y,direct mapping +188234005,Malignant tumor of seminal vesicle (disorder),y,direct mapping +254850005,Serous papillary cystadenocarcinoma ovary (disorder),y,direct mapping +188307009,Malignant tumor of cranial nerve (disorder),y,direct mapping +255107005,Seminoma of testis (disorder),y,direct mapping +363366009,Malignant tumor of soft tissue of pelvis (disorder),y,direct mapping +277156006,Malignant tumor of external ear (disorder),y,direct mapping +363456000,Malignant tumor of urachus (disorder),y,direct mapping +90725004,Serous cystadenocarcinoma (morphologic abnormality),y,direct mapping +254441002,Carcinoma of upper buccal sulcus (disorder),y,direct mapping +92604004,Carcinoma in situ of greater curvature of stomach (disorder),y,direct mapping +128750008,Rhabdomyosarcoma with ganglionic differentiation (morphologic abnormality),y,direct mapping +254989000,Carcinoma ex pleomorphic adenoma of lacrimal gland (disorder),y,direct mapping +188054000,Malignant melanoma of perineum (disorder),y,direct mapping +45024009,Hepatoblastoma (morphologic abnormality),y,direct mapping +307608006,Ewing's sarcoma of bone (disorder),y,direct mapping +254466003,Carcinoma of sublingual gland (disorder),y,direct mapping +187792009,Malignant tumor of tail of pancreas (disorder),y,direct mapping +274085008,Tonsil carcinoma (disorder),y,direct mapping +93941005,Primary malignant neoplasm of paraganglion (disorder),y,direct mapping +20667008,Myosarcoma (morphologic abnormality),y,direct mapping +1090311000000101,Malignant neoplasm of trunk (disorder),y,direct mapping +187724003,Malignant tumor of abdominal part of esophagus (disorder),y,direct mapping +15949004,"Thymoma, malignant (morphologic abnormality)",y,direct mapping +32456001,Desmoplastic medulloblastoma (morphologic abnormality),y,direct mapping +286895009,"Carcinoma of breast - upper, outer quadrant (disorder)",y,direct mapping +285617006,Metastasis to retroperitoneum of unknown primary (disorder),y,direct mapping +310498001,Malignant melanoma of back (disorder),y,direct mapping +56484001,Adenocarcinoma with cartilaginous and osseous metaplasia (morphologic abnormality),y,direct mapping +448992002,Malignant epithelial neoplasm of appendix (disorder),y,direct mapping +188069004,Malignant melanoma of thigh (disorder),y,direct mapping +51217003,Acidophil carcinoma (morphologic abnormality),y,direct mapping +23444003,Mixed acidophil-basophil carcinoma (morphologic abnormality),y,direct mapping +188323009,"Malignant neoplasm of peripheral nerves of upper limb, including shoulder (disorder)",y,direct mapping +1090301000000103,Malignant neoplasm of flank (disorder),y,direct mapping +27092008,Ameloblastic fibrosarcoma (morphologic abnormality),y,direct mapping +93927001,Primary malignant neoplasm of occipital bone (disorder),y,direct mapping +363485006,Malignant tumor of minor salivary gland (disorder),y,direct mapping +372094002,Malignant neoplasm of axillary tail of breast (disorder),y,direct mapping +51465000,Composite carcinoid (morphologic abnormality),y,direct mapping +703545003,Encapsulated papillary carcinoma (morphologic abnormality),y,direct mapping +253092005,Malignant Schwannoma with divergent mesenchymal and epithelial differentiation (morphologic abnormality),y,direct mapping +254509006,Malignant tumor of anterior commissure (disorder),y,direct mapping +14494009,Meningeal sarcomatosis (morphologic abnormality),y,direct mapping +188033007,Malignant melanoma of auricle (ear) (disorder),y,direct mapping +285645000,Disseminated malignancy of unknown primary (disorder),y,direct mapping +39896009,"Malignant melanoma, regressing (morphologic abnormality)",y,direct mapping +254484001,Malignant tumor of posterior margin of nasal septum and choanae (disorder),y,direct mapping +80727009,Water-clear cell adenocarcinoma (morphologic abnormality),y,direct mapping +187833006,"Malignant neoplasm of auditory tube, middle ear and mastoid air cells (disorder)",y,direct mapping +55320002,Superficial spreading melanoma (morphologic abnormality),y,direct mapping +253096008,Peripheral neuroectodermal tumor (disorder),y,direct mapping +187702003,Malignant tumor of nasopharyngeal soft palate surface (disorder),y,direct mapping +187972006,Malignant neoplasm of navicular (disorder),y,direct mapping +372101000,Carcinoma of extrahepatic bile duct (disorder),y,direct mapping +188153009,Malignant neoplasm of lower-inner quadrant of female breast (disorder),y,direct mapping +363410008,Malignant tumor of sigmoid colon (disorder),y,direct mapping +50007008,Chordoma (morphologic abnormality),y,direct mapping +312104005,Cholangiocarcinoma of biliary tract (disorder),y,direct mapping +255083005,Malignant tumor of anus and anal canal (disorder),y,direct mapping +372141009,Carcinoma of vocal cord (disorder),y,direct mapping +254838004,Carcinoma of breast (disorder),y,direct mapping +449627008,Malignant neoplasm of long bone of lower limb (disorder),y,direct mapping +188290004,Malignant neoplasm of uncus (disorder),y,direct mapping +254559002,Carcinoma of pyloric antrum (disorder),y,direct mapping +2092003,"Malignant melanoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +94283001,Secondary malignant neoplasm of epididymis (disorder),y,direct mapping +1090941000000104,Malignant neoplasm of inguinal region (disorder),y,direct mapping +314968009,Local recurrence of malignant tumor of urinary bladder (disorder),y,direct mapping +307219002,Retroperitoneal sarcoma (disorder),y,direct mapping +187644001,Malignant tumor of junctional zone of tongue (disorder),y,direct mapping +62064005,"Mesothelioma, malignant (morphologic abnormality)",y,direct mapping +915007,Malignant melanoma in junctional nevus (morphologic abnormality),y,direct mapping +188193007,Malignant neoplasm of myometrium of corpus uteri (disorder),y,direct mapping +363421004,Malignant neoplasm of omentum (disorder),y,direct mapping +276419004,Malignant tumor of corpus spongiosum (disorder),y,direct mapping +363458004,Malignant tumor of ureter (disorder),y,direct mapping +315000005,Metastasis from malignant tumor of liver (disorder),y,direct mapping +285634003,Metastasis to breast of unknown primary (disorder),y,direct mapping +884601000000103,Bowel scope (flexible sigmoidoscopy) screen: cancer detected (finding),y,direct mapping +128916007,Medullary carcinoma with amyloid stroma (morphologic abnormality),y,direct mapping +187798008,Malignant neoplasm of ectopic pancreatic tissue (disorder),y,direct mapping +93759001,Primary malignant neoplasm of coccygeal body (disorder),y,direct mapping +187738005,Malignant neoplasm of pyloric canal of stomach (disorder),y,direct mapping +109837002,Overlapping malignant neoplasm of small intestine (disorder),y,direct mapping +363411007,Malignant tumor of appendix (disorder),y,direct mapping +9618003,Epithelial-myoepithelial carcinoma (morphologic abnormality),y,direct mapping +55045006,Neuroepithelioma (morphologic abnormality),y,direct mapping +94612008,Secondary malignant neoplasm of superficial inguinal lymph nodes (disorder),y,direct mapping +187925006,Malignant neoplasm of costal cartilage (disorder),y,direct mapping +94357009,Secondary malignant neoplasm of jejunum (disorder),y,direct mapping +94297009,Secondary malignant neoplasm of female breast (disorder),y,direct mapping +370967009,Retinoblastoma (disorder),y,direct mapping +255069008,"Carcinoma of lip, oral cavity and/or pharynx (disorder)",y,direct mapping +187734007,Malignant neoplasm of cardioesophageal junction of stomach (disorder),y,direct mapping +94513006,Secondary malignant neoplasm of rectum (disorder),y,direct mapping +285607001,Metastasis to mediastinum of unknown primary (disorder),y,direct mapping +1090171000000108,Secondary malignant neoplasm of sacral lymph nodes (disorder),y,direct mapping +372156000,Malignant melanoma - category (morphologic abnormality),y,direct mapping +67830002,Teratocarcinoma (morphologic abnormality),y,direct mapping +37206003,"Synovial sarcoma, spindle cell (morphologic abnormality)",y,direct mapping +13875003,Glomangiosarcoma (morphologic abnormality),y,direct mapping +363489000,Malignant tumor of neck (disorder),y,direct mapping +188253000,Malignant tumor of pelviureteric junction (disorder),y,direct mapping +72907003,"Seminoma, anaplastic (morphologic abnormality)",y,direct mapping +286890004,Carcinoma of lower limb bones (disorder),y,direct mapping +254918001,Sarcoma of kidney (disorder),y,direct mapping +187786003,Malignant neoplasm of sphincter of Oddi (disorder),y,direct mapping +109848009,Overlapping malignant neoplasm of pancreas (disorder),y,direct mapping +19906005,Retinoblastoma (morphologic abnormality),y,direct mapping +30546008,Clear cell adenocarcinoma (morphologic abnormality),y,direct mapping +363397008,Malignant tumor of roof of nasopharynx (disorder),y,direct mapping +254863004,Granulosa cell tumor of ovary (disorder),y,direct mapping +314994000,Metastasis from malignant tumor of prostate (disorder),y,direct mapping +73348003,"Oligodendroglioma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +363504005,Malignant tumor of lower limb (disorder),y,direct mapping +254730000,Superficial spreading malignant melanoma of skin (disorder),y,direct mapping +187777008,Malignant neoplasm of intrahepatic gall duct (disorder),y,direct mapping +187929000,Malignant neoplasm of scapula and long bones of upper arm (disorder),y,direct mapping +55937004,Neuroendocrine tumor (morphologic abnormality),y,direct mapping +109830000,Overlapping malignant neoplasm of floor of mouth (disorder),y,direct mapping +93817006,Primary malignant neoplasm of great vessels (disorder),y,direct mapping +187793004,Malignant tumor of pancreatic duct (disorder),y,direct mapping +254877001,Sarcoma of uterus (disorder),y,direct mapping +24604009,Medullomyoblastoma (morphologic abnormality),y,direct mapping +255128001,Malignant infiltration of peripheral nerve (disorder),y,direct mapping +363500001,Multiple malignancy (disorder),y,direct mapping +363465007,Malignant tumor of retina (disorder),y,direct mapping +187920001,Malignant neoplasm of ribs and/or sternum and/or clavicle (disorder),y,direct mapping +254570009,Carcinoma of duodenum (disorder),y,direct mapping +177281002,Excision of melanoma (procedure),y,direct mapping +285614004,Metastasis to pancreas of unknown primary (disorder),y,direct mapping +94455000,Secondary malignant neoplasm of ovary (disorder),y,direct mapping +721567004,Primary malignant neoplasm of placenta (disorder),y,direct mapping +94515004,Secondary malignant neoplasm of respiratory tract (disorder),y,direct mapping +109844006,Angiosarcoma of liver (disorder),y,direct mapping +35232005,Infiltrating duct and lobular carcinoma (morphologic abnormality),y,direct mapping +30713000,Hypernephroid tumor (morphologic abnormality),y,direct mapping +254996003,Malignant fibrous histiocytoma of orbit (disorder),y,direct mapping +276826005,Malignant glioma of brain (disorder),y,direct mapping +188293002,Malignant neoplasm of floor of cerebral ventricle (disorder),y,direct mapping +77659000,Paraneoplastic neuropathy (disorder),y,direct mapping +187740000,Malignant tumor of pyloric antrum (disorder),y,direct mapping +312949007,Retinal pigment epithelial adenocarcinoma (disorder),y,direct mapping +304545002,Adenocarcinoma of ileum (disorder),y,direct mapping +187653008,Malignant tumor of lateral floor of mouth (disorder),y,direct mapping +94181007,Secondary malignant neoplasm of axillary lymph nodes (disorder),y,direct mapping +363412000,Malignant tumor of ascending colon (disorder),y,direct mapping +449254004,Malignant epithelial neoplasm of pharynx (disorder),y,direct mapping +363507003,Malignant neoplasm of pharynx (disorder),y,direct mapping +254734009,Malignant melanoma arising in congenital nevus (disorder),y,direct mapping +276962007,Squamous cell carcinoma of palate (disorder),y,direct mapping +449420002,Malignant neoplasm of cerebellum (disorder),y,direct mapping +93924008,Primary malignant neoplasm of nipple of female breast (disorder),y,direct mapping +188183000,Malignant neoplasm of cervical stump (disorder),y,direct mapping +254390001,Carcinoma of vermilion border of lower lip (disorder),y,direct mapping +188184006,Malignant neoplasm of squamocolumnar junction of cervix (disorder),y,direct mapping +363430007,Malignant tumor of subglottis (disorder),y,direct mapping +188230001,Malignant tumor of body of penis (disorder),y,direct mapping +9903002,"Paraganglioma, malignant (morphologic abnormality)",y,direct mapping +94409002,Secondary malignant neoplasm of mediastinum (disorder),y,direct mapping +189826001,Malignant cystosarcoma phyllodes (morphologic abnormality),y,direct mapping +255112006,Malignant tumor of pituitary and hypothalamus (disorder),y,direct mapping +94416001,Secondary malignant neoplasm of mouth (disorder),y,direct mapping +314961003,Local recurrence of malignant tumor of stomach (disorder),y,direct mapping +188319001,Malignant neoplasm of spinal pia mater (disorder),y,direct mapping +255074000,Malignant tumor of nasal cavity and nasopharynx (disorder),y,direct mapping +93757004,Primary malignant neoplasm of clavicle (disorder),y,direct mapping +187992004,Malignant neoplasm of connective and soft tissue of shoulder (disorder),y,direct mapping +188021002,Malignant neoplasm of connective and soft tissue of inguinal region (disorder),y,direct mapping +314963000,Local recurrence of malignant tumor of liver (disorder),y,direct mapping +187760008,"Malignant neoplasm of rectum, rectosigmoid junction and anus (disorder)",y,direct mapping +56565002,Mesenchymal chondrosarcoma (morphologic abnormality),y,direct mapping +363477002,Malignant neoplasm of cauda equina (disorder),y,direct mapping +363416002,Malignant tumor of extrahepatic bile duct (disorder),y,direct mapping +254567005,Carcinoma of greater curve of stomach (disorder),y,direct mapping +94260004,Secondary malignant neoplasm of colon (disorder),y,direct mapping +254393004,Carcinoma of frenum of lip (disorder),y,direct mapping +372063002,Malignant neoplasm of nervous system (disorder),y,direct mapping +254478004,Malignant tumor of inferior turbinate (disorder),y,direct mapping +86049000,"Malignant neoplasm, primary (morphologic abnormality)",y,direct mapping +189923008,Monstrocellular sarcoma (morphologic abnormality),y,direct mapping +255109008,Transitional cell carcinoma of bladder (disorder),y,direct mapping +93995000,Primary malignant neoplasm of sacrococcygeal region (disorder),y,direct mapping +187943005,Malignant neoplasm of carpal bone - capitate (disorder),y,direct mapping +87364003,Neuroblastoma (morphologic abnormality),y,direct mapping +188263008,Malignant tumor of ciliary body (disorder),y,direct mapping +363434003,Malignant tumor of thymus (disorder),y,direct mapping +255114007,Kaposi's sarcoma of conjunctiva (disorder),y,direct mapping +66515009,"Glucagonoma, malignant (morphologic abnormality)",y,direct mapping +277993001,Olfactory neuroendocrine carcinoma (morphologic abnormality),y,direct mapping +254586002,Malignant tumor of anorectal junction (disorder),y,direct mapping +31186001,Chondroma (morphologic abnormality),y,direct mapping +255072001,Malignant tumor of salivary gland (disorder),y,direct mapping +1090911000000100,Chondroma (disorder),y,direct mapping +363389001,Malignant tumor of uvula (disorder),y,direct mapping +187947006,Malignant neoplasm of third metacarpal bone (disorder),y,direct mapping +188063003,Malignant melanoma of hand (disorder),y,direct mapping +285637005,Metastasis to ovary of unknown primary (disorder),y,direct mapping +94491007,Secondary malignant neoplasm of pituitary gland (disorder),y,direct mapping +187970003,Malignant neoplasm of lateral cuneiform (disorder),y,direct mapping +12302002,Small cell osteosarcoma (morphologic abnormality),y,direct mapping +254445006,Carcinoma of lower buccal sulcus (disorder),y,direct mapping +712525007,Malignant neoplasm of short bone of lower limb (disorder),y,direct mapping +439740005,Postoperative follow-up visit (procedure),y,direct mapping +112679004,Pseudomyxoma peritonei (morphologic abnormality),y,direct mapping +363419009,Malignant tumor of head of pancreas (disorder),y,direct mapping +94335002,Secondary malignant neoplasm of ileum (disorder),y,direct mapping +187842004,Malignant tumor of supraglottis (disorder),y,direct mapping +188072006,Malignant melanoma of lower leg (disorder),y,direct mapping +254526000,Malignant tumor of laryngeal ventricle (disorder),y,direct mapping +363368005,Carcinoma of body of pancreas (disorder),y,direct mapping +187767006,Malignant neoplasm of liver and intrahepatic bile ducts (disorder),y,direct mapping +187939006,Malignant neoplasm of carpal bone - triquetrum (disorder),y,direct mapping +94393006,Secondary malignant neoplasm of lymph nodes of face (disorder),y,direct mapping +83217000,"Medulloblastoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +187811009,Malignant neoplasm of mesorectum (disorder),y,direct mapping +93806005,Primary malignant neoplasm of frontal bone (disorder),y,direct mapping +314970000,Local recurrence of malignant tumor of cervix (disorder),y,direct mapping +32913002,Medullary carcinoma (morphologic abnormality),y,direct mapping +26211003,Juxtacortical chondrosarcoma (morphologic abnormality),y,direct mapping +109367000,Overlapping malignant neoplasm of nasopharynx (disorder),y,direct mapping +188308004,Malignant neoplasm of olfactory bulb (disorder),y,direct mapping +187652003,Malignant tumor of anterior floor of mouth (disorder),y,direct mapping +269580008,Malignant melanoma of upper limb (disorder),y,direct mapping +188176007,Malignant neoplasm of endocervical canal (disorder),y,direct mapping +188235006,Malignant tumor of tunica vaginalis (disorder),y,direct mapping +187692001,Malignant tumor of nasopharynx (disorder),y,direct mapping +363449006,Malignant tumor of testis (disorder),y,direct mapping +188285002,Malignant neoplasm of globus pallidus (disorder),y,direct mapping +1090931000000108,Malignant neoplasm of multiple endocrine glands (disorder),y,direct mapping +68358000,Adenocarcinoma with spindle cell metaplasia (morphologic abnormality),y,direct mapping +13238004,"Granular cell tumor, malignant (morphologic abnormality)",y,direct mapping +48952003,Astroblastoma (morphologic abnormality),y,direct mapping +363387004,Malignant tumor of hard palate (disorder),y,direct mapping +188050009,Malignant melanoma of breast (disorder),y,direct mapping +187835004,Malignant tumor of tympanic cavity (disorder),y,direct mapping +77870005,"Leydig cell tumor, malignant (morphologic abnormality)",y,direct mapping +93925009,Primary malignant neoplasm of nipple of male breast (disorder),y,direct mapping +363402007,Malignant tumor of esophagus (disorder),y,direct mapping +1090161000000101,Secondary malignant neoplasm of diaphragmatic lymph nodes (disorder),y,direct mapping +1090221000000100,Secondary malignant neoplasm of internal iliac lymph nodes (disorder),y,direct mapping +363488008,Malignant tumor of false cord (disorder),y,direct mapping +255129009,Malignant infiltration of peripheral nerve plexus (disorder),y,direct mapping +94350006,Secondary malignant neoplasm of intrapelvic lymph nodes (disorder),y,direct mapping +6219000,"Neoplasm, malignant, uncertain whether primary or metastatic (morphologic abnormality)",y,direct mapping +94609005,Secondary malignant neoplasm of submandibular lymph nodes (disorder),y,direct mapping +74409009,Endodermal sinus tumor (morphologic abnormality),y,direct mapping +307226002,Metastatic adenocarcinoma of unknown origin (disorder),y,direct mapping +187903000,Malignant neoplasm of malar bone (disorder),y,direct mapping +88252006,Choroid plexus carcinoma (morphologic abnormality),y,direct mapping +93888008,Primary malignant neoplasm of maxilla (disorder),y,direct mapping +187927003,Malignant neoplasm of xiphoid process (disorder),y,direct mapping +76312009,Chondroblastic osteosarcoma (morphologic abnormality),y,direct mapping +363364007,Malignant tumor of soft tissue of hip (disorder),y,direct mapping +188019007,Malignant neoplasm of connective and soft tissue of pelvis (disorder),y,direct mapping +187637005,"Malignant neoplasm of tongue, tip and lateral border (disorder)",y,direct mapping +275396004,Carcinoma of anterior two-thirds of tongue - dorsal surface (disorder),y,direct mapping +187987001,Malignant neoplasm of cartilage of ear (disorder),y,direct mapping +128918008,Parosteal osteosarcoma (morphologic abnormality),y,direct mapping +363408006,Malignant tumor of transverse colon (disorder),y,direct mapping +94081005,Primary malignant neoplasm of sweat gland (disorder),y,direct mapping +188154003,Malignant neoplasm of upper-outer quadrant of female breast (disorder),y,direct mapping +187829004,Malignant neoplasm of cartilage of nose (disorder),y,direct mapping +109875002,Overlapping malignant neoplasm of penis (disorder),y,direct mapping +187722004,Malignant tumor of cervical part of esophagus (disorder),y,direct mapping +277530005,Malignant melanoma of meninges (disorder),y,direct mapping +1090281000000104,Malignant neoplasm of genital labia (disorder),y,direct mapping +94449005,Secondary malignant neoplasm of occipital lymph nodes (disorder),y,direct mapping +93770008,Primary malignant neoplasm of cystic duct (disorder),y,direct mapping +399326009,Malignant tumor of urinary bladder (disorder),y,direct mapping +62681000,Nonencapsulated sclerosing carcinoma (morphologic abnormality),y,direct mapping +94233006,Secondary malignant neoplasm of bronchus (disorder),y,direct mapping +956531000000104,Malignant melanoma stage IV M1b (finding),y,direct mapping +188157005,"Malignant neoplasm, overlapping lesion of breast (disorder)",y,direct mapping +314973003,Local recurrence of malignant tumor of bone (disorder),y,direct mapping +363367000,Malignant tumor of vulva (disorder),y,direct mapping +187608006,Malignant tumor of frenum of upper lip (disorder),y,direct mapping +447883002,Malignant neoplasm of carotid body (disorder),y,direct mapping +275419009,Primary vulval cancer (disorder),y,direct mapping +187659007,Malignant tumor of upper buccal sulcus (disorder),y,direct mapping +254457002,Carcinoma of retromolar area (disorder),y,direct mapping +254436005,Carcinoma of uvula (disorder),y,direct mapping +187844003,Malignant neoplasm of cricoid cartilage (disorder),y,direct mapping +81920005,Solid carcinoma (morphologic abnormality),y,direct mapping +83292005,"Malignant teratoma, undifferentiated (morphologic abnormality)",y,direct mapping +187773007,Malignant neoplasm of interlobular bile ducts (disorder),y,direct mapping +253018005,Fibrolamellar hepatocellular carcinoma (disorder),y,direct mapping +363399006,Malignant tumor of hypopharynx (disorder),y,direct mapping +269459004,Malignant tumor of lesser curve of stomach (disorder),y,direct mapping +188009001,Malignant neoplasm of connective and soft tissue of thorax (disorder),y,direct mapping +188286001,Malignant tumor of hypothalamus (disorder),y,direct mapping +416769008,Malignant teratoma of testis (disorder),y,direct mapping +285631006,Metastasis to skin of unknown primary (disorder),y,direct mapping +187814001,Malignant neoplasm of the pouch of Douglas (disorder),y,direct mapping +188052001,Malignant melanoma of groin (disorder),y,direct mapping +17264009,Carcinoma ex pleomorphic adenoma (morphologic abnormality),y,direct mapping +276821000,Malignant melanoma of anus (disorder),y,direct mapping +254886006,Squamous cell carcinoma of cervix (disorder),y,direct mapping +363428005,Malignant tumor of sphenoid sinus (disorder),y,direct mapping +29792007,Trabecular adenocarcinoma (morphologic abnormality),y,direct mapping +93955002,Primary malignant neoplasm of periadrenal tissue (disorder),y,direct mapping +188074007,Malignant melanoma of heel (disorder),y,direct mapping +278050001,Sarcoma of breast (disorder),y,direct mapping +188240003,Malignant tumor of vault of bladder (disorder),y,direct mapping +20380000,Ameloblastic odontosarcoma (morphologic abnormality),y,direct mapping +187733001,Malignant neoplasm of cardiac orifice of stomach (disorder),y,direct mapping +94248000,Secondary malignant neoplasm of cerebrum (disorder),y,direct mapping +887521000000104,Cervical smear - high grade dyskaryosis with features of invasive squamous carcinoma (finding),y,direct mapping +38958001,Mixed cell adenocarcinoma (morphologic abnormality),y,direct mapping +187836003,Malignant tumor of tympanic antrum (disorder),y,direct mapping +187757001,"Malignant neoplasm, overlapping lesion of colon (disorder)",y,direct mapping +37138001,Epithelioid cell melanoma (morphologic abnormality),y,direct mapping +363445000,Malignant tumor of vagina (disorder),y,direct mapping +188340000,Malignant tumor of craniopharyngeal duct (disorder),y,direct mapping +30924005,"Rhabdomyosarcoma, no subtype (morphologic abnormality)",y,direct mapping +109348004,Overlapping malignant neoplasm of bone and articular cartilage of limbs (disorder),y,direct mapping +1090101000000100,Secondary malignant neoplasm of supratrochlear lymph nodes (disorder),y,direct mapping +443679004,Malignant neoplasm of skeletal system (disorder),y,direct mapping +27849002,Myxoid liposarcoma (morphologic abnormality),y,direct mapping +276808007,Carcinoid tumor of stomach (disorder),y,direct mapping +19897006,Malignant peripheral nerve sheath tumor (morphologic abnormality),y,direct mapping +417570003,Gestational choriocarcinoma (disorder),y,direct mapping +254975005,Malignant meningioma of optic nerve sheath (disorder),y,direct mapping +363497007,Malignant tumor of meninges (disorder),y,direct mapping +254934003,Malignant tumor of urethral stump (disorder),y,direct mapping +87737001,Signet ring cell carcinoma (morphologic abnormality),y,direct mapping +255066001,Carcinoma of genitourinary organ (disorder),y,direct mapping +255035007,Adrenal carcinoma (disorder),y,direct mapping +2985005,"Paget's disease, mammary (morphologic abnormality)",y,direct mapping +93680004,Primary malignant neoplasm of areola of female breast (disorder),y,direct mapping +285635002,Metastasis to uterus of unknown primary (disorder),y,direct mapping +94280003,Secondary malignant neoplasm of endocrine gland (disorder),y,direct mapping +187700006,Malignant tumor of anterior wall of nasopharynx (disorder),y,direct mapping +187956003,Malignant neoplasm of sacral vertebra (disorder),y,direct mapping +371972005,Malignant neoplasm of body of uterus (disorder),y,direct mapping +31671006,Pineoblastoma (morphologic abnormality),y,direct mapping +303201005,Metastasis to multiple lymph nodes (disorder),y,direct mapping +363466008,Malignant tumor of choroid (disorder),y,direct mapping +187784000,Malignant neoplasm of hepatic duct (disorder),y,direct mapping +188301005,Malignant neoplasm of corpus callosum (disorder),y,direct mapping +94579000,Secondary malignant neoplasm of skin (disorder),y,direct mapping +128462008,Secondary malignant neoplastic disease (disorder),y,direct mapping +94626004,Secondary malignant neoplasm of omentum (disorder),y,direct mapping +314953008,Local recurrence of malignant tumor of thyroid gland (disorder),y,direct mapping +254601002,Sarcoma of liver (disorder),y,direct mapping +57141000,Apocrine adenocarcinoma (morphologic abnormality),y,direct mapping +1090201000000109,Secondary malignant neoplasm of deep inguinal lymph nodes (disorder),y,direct mapping +188325002,Malignant neoplasm of peripheral nerve of thorax (disorder),y,direct mapping +1090251000000105,Malignant neoplasm of nose (disorder),y,direct mapping +255031003,Anaplastic thyroid carcinoma (disorder),y,direct mapping +188321006,Malignant neoplasm of peripheral nerves and autonomic nervous system (disorder),y,direct mapping +74532006,"Glioma, malignant (morphologic abnormality)",y,direct mapping +188353002,"Malignant neoplasm of head, neck and face (disorder)",y,direct mapping +188272000,Malignant tumor of lacrimal gland (disorder),y,direct mapping +73506006,Small cell sarcoma (morphologic abnormality),y,direct mapping +363438000,Malignant tumor of vertebral column (disorder),y,direct mapping +254839007,Scirrhous carcinoma of breast (disorder),y,direct mapping +188315007,Malignant neoplasm of cerebral pia mater (disorder),y,direct mapping +363352004,Malignant tumor of anal canal (disorder),y,direct mapping +22217002,Mixed glioma (morphologic abnormality),y,direct mapping +254912000,Regressed malignant testicular tumor (disorder),y,direct mapping +93782004,Primary malignant neoplasm of epicardium (disorder),y,direct mapping +93957005,Primary malignant neoplasm of pericardium (disorder),y,direct mapping +187709007,Malignant neoplasm of posterior pharynx (disorder),y,direct mapping +371979001,Malignant neoplasm of clitoris (disorder),y,direct mapping +74279005,"Chondroblastoma, malignant (morphologic abnormality)",y,direct mapping +94494004,Secondary malignant neoplasm of popliteal lymph nodes (disorder),y,direct mapping +274084007,Palate carcinoma (disorder),y,direct mapping +187938003,Malignant neoplasm of carpal bone - lunate (disorder),y,direct mapping +94292003,Secondary malignant neoplasm of eye (disorder),y,direct mapping +363494000,Malignant tumor of mediastinum (disorder),y,direct mapping +443565000,Oligodendroglioma - category (morphologic abnormality),y,direct mapping +363492001,Malignant tumor of peritoneum (disorder),y,direct mapping +94338000,Secondary malignant neoplasm of infraclavicular lymph nodes (disorder),y,direct mapping +253077009,Melanocytic medullomyoblastoma (morphologic abnormality),y,direct mapping +109836006,Overlapping malignant neoplasm of stomach (disorder),y,direct mapping +88334008,Teratoma with malignant transformation (morphologic abnormality),y,direct mapping +372140005,Carcinoma of gallbladder (disorder),y,direct mapping +93677000,Primary malignant neoplasm of aortic body (disorder),y,direct mapping +254993006,Liposarcoma of orbit (disorder),y,direct mapping +187841006,Malignant tumor of glottis (disorder),y,direct mapping +188034001,Malignant melanoma of external auditory meatus (disorder),y,direct mapping +363363001,Malignant tumor of soft tissue of shoulder (disorder),y,direct mapping +429033009,Malignant neoplasm of cerebrum (disorder),y,direct mapping +278055006,Malignant Leydig cell tumor of testis (disorder),y,direct mapping +18450009,Malignant melanoma in precancerous melanosis (morphologic abnormality),y,direct mapping +413743008,Cancer rehabilitation and readaption (regime/therapy),y,direct mapping +187834000,Malignant tumor of Eustachian tube (disorder),y,direct mapping +16974005,"Acral lentiginous melanoma, malignant (morphologic abnormality)",y,direct mapping +54443001,"Fibrous mesothelioma, malignant (morphologic abnormality)",y,direct mapping +285644001,Metastasis to lymph node of unknown primary (disorder),y,direct mapping +93772000,Primary malignant neoplasm of diaphragm (disorder),y,direct mapping +231834005,Malignant melanoma of eyelid (disorder),y,direct mapping +94395004,Secondary malignant neoplasm of lymph nodes of lower limb (disorder),y,direct mapping +363414004,Malignant tumor of rectosigmoid junction (disorder),y,direct mapping +187725002,Malignant tumor of upper third of esophagus (disorder),y,direct mapping +188190005,Malignant neoplasm of cornu of corpus uteri (disorder),y,direct mapping +93842002,Primary malignant neoplasm of ischium (disorder),y,direct mapping +315008003,Metastasis from malignant tumor of buccal cavity (disorder),y,direct mapping +399068003,Malignant tumor of prostate (disorder),y,direct mapping +363484005,Malignant tumor of pelvis (disorder),y,direct mapping +52178006,Combined hepatocellular carcinoma and cholangiocarcinoma (morphologic abnormality),y,direct mapping +269578002,Malignant melanoma of head and neck (disorder),y,direct mapping +4305004,Metastatic signet ring cell carcinoma (morphologic abnormality),y,direct mapping +82711006,Infiltrating duct carcinoma (morphologic abnormality),y,direct mapping +254828009,Malignant lipomatous tumor (disorder),y,direct mapping +188295009,Malignant neoplasm of cerebral peduncle (disorder),y,direct mapping +254995004,Malignant hemangiopericytoma of orbit (disorder),y,direct mapping +94083008,Primary malignant neoplasm of talus (disorder),y,direct mapping +94161006,Secondary malignant neoplasm of adrenal gland (disorder),y,direct mapping +26138003,Gliomatosis cerebri (morphologic abnormality),y,direct mapping +254915003,Clear cell carcinoma of kidney (disorder),y,direct mapping +315002002,Metastasis from malignant tumor of stomach (disorder),y,direct mapping +94085001,Primary malignant neoplasm of temporal bone (disorder),y,direct mapping +2227007,Adrenal cortical carcinoma (morphologic abnormality),y,direct mapping +78453009,Telangiectatic osteosarcoma (morphologic abnormality),y,direct mapping +286899003,Carcinoma of genital organ (disorder),y,direct mapping +93643005,Malignant melanoma of skin of nose (disorder),y,direct mapping +285611007,Metastasis to colon of unknown primary (disorder),y,direct mapping +314989000,Metastasis from malignant tumor of soft tissues (disorder),y,direct mapping +395099008,Cancer confirmed (situation),y,direct mapping +188076009,Malignant melanoma of toe (disorder),y,direct mapping +254869000,Malignant germ cell tumor of ovary (disorder),y,direct mapping +93728003,Primary malignant neoplasm of broad ligament (disorder),y,direct mapping +93979000,Primary malignant neoplasm of radius (disorder),y,direct mapping +363505006,Malignant tumor of oral cavity (disorder),y,direct mapping +4797003,Papillary adenocarcinoma (morphologic abnormality),y,direct mapping +88195001,Alveolar soft part sarcoma (morphologic abnormality),y,direct mapping +188462001,Secondary malignant neoplasm of brain and spinal cord (disorder),y,direct mapping +187916000,Malignant neoplasm of cervical vertebra (disorder),y,direct mapping +26019009,"Retinoblastoma, differentiated (morphologic abnormality)",y,direct mapping +188077000,Malignant melanoma of great toe (disorder),y,direct mapping +188147009,Malignant neoplasm of nipple and areola of female breast (disorder),y,direct mapping +363405009,Malignant tumor of ileum (disorder),y,direct mapping +271568003,Malignant tumor of lower labial mucosa (disorder),y,direct mapping +109378008,"Mesothelioma (malignant, clinical disorder) (disorder)",y,direct mapping +187831008,Malignant tumor of nasal vestibule (disorder),y,direct mapping +86562005,Cystic mesothelioma (morphologic abnormality),y,direct mapping +1090081000000106,Secondary malignant neoplasm of paratracheal lymph nodes (disorder),y,direct mapping +93947009,Primary malignant neoplasm of parietal peritoneum (disorder),y,direct mapping +50813003,Mixed epithelioid and spindle cell melanoma (morphologic abnormality),y,direct mapping +314191009,Cystadenocarcinoma of ovary (disorder),y,direct mapping +253039003,Round cell sarcoma (morphologic abnormality),y,direct mapping +448674007,Malignant neoplasm of parametrium (disorder),y,direct mapping +315005000,Metastasis from malignant tumor of bronchus (disorder),y,direct mapping +363446004,Malignant neoplasm of labia majora (disorder),y,direct mapping +314987003,Metastasis from malignant melanoma of skin (disorder),y,direct mapping +281562007,Adrenal neuroblastoma (disorder),y,direct mapping +302835009,Pheochromocytoma (disorder),y,direct mapping +72495009,Mucinous adenocarcinoma (morphologic abnormality),y,direct mapping +363396004,Malignant tumor of branchial cleft (disorder),y,direct mapping +342561000000102,Siewert type III adenocarcinoma (disorder),y,direct mapping +254561006,Carcinoma of pylorus (disorder),y,direct mapping +93950007,Primary malignant neoplasm of patella (disorder),y,direct mapping +70179006,Cholangiocarcinoma (morphologic abnormality),y,direct mapping +354002,Malignant peripheral nerve sheath tumor with rhabdomyoblastic differentiation (morphologic abnormality),y,direct mapping +363418001,Malignant tumor of pancreas (disorder),y,direct mapping +314952003,Local recurrence of malignant tumor of buccal cavity (disorder),y,direct mapping +363496003,Malignant tumor of soft tissue of abdomen (disorder),y,direct mapping +60346004,Islet cell carcinoma (morphologic abnormality),y,direct mapping +254517003,Malignant tumor of suprahyoid epiglottis (disorder),y,direct mapping +187937008,Malignant neoplasm of carpal bone - scaphoid (disorder),y,direct mapping +394932008,Gleason prostate grade 5-7 (medium) (finding),y,direct mapping +187830009,Malignant neoplasm of nasal conchae (disorder),y,direct mapping +363391009,Malignant tumor of retromolar area (disorder),y,direct mapping +188155002,Malignant neoplasm of lower-outer quadrant of female breast (disorder),y,direct mapping +110013004,Overlapping malignant neoplasm of tonsil (disorder),y,direct mapping +80091008,Sertoli cell carcinoma (morphologic abnormality),y,direct mapping +109853004,Malignant mesothelioma of peritoneum (disorder),y,direct mapping +254973003,Malignant astrocytoma of optic nerve (disorder),y,direct mapping +94514000,Secondary malignant neoplasm of renal pelvis (disorder),y,direct mapping +78197004,"Comedocarcinoma, noninfiltrating (morphologic abnormality)",y,direct mapping +254543002,Carcinoma of abdominal part of esophagus (disorder),y,direct mapping +363498002,Malignant tumor of optic nerve (disorder),y,direct mapping +276829003,Glioblastoma multiforme of spinal cord (disorder),y,direct mapping +187685006,Malignant neoplasm of junctional region of epiglottis (disorder),y,direct mapping +281563002,Thoracic neuroblastoma (disorder),y,direct mapping +1443001,Chromophobe carcinoma (morphologic abnormality),y,direct mapping +187727005,Malignant tumor of lower third of esophagus (disorder),y,direct mapping +253042009,Myxoid dermatofibrosarcoma protuberans (disorder),y,direct mapping +94099002,Primary malignant neoplasm of tibia (disorder),y,direct mapping +277985001,Nonteratoid medulloepithelioma (morphologic abnormality),y,direct mapping +94503003,Secondary malignant neoplasm of prostate (disorder),y,direct mapping +254837009,Malignant neoplasm of breast (disorder),y,direct mapping +188326001,Malignant neoplasm of peripheral nerve of abdomen (disorder),y,direct mapping +34360000,"Fibrous histiocytoma, malignant (morphologic abnormality)",y,direct mapping +371964008,Malignant neoplasm of adrenal cortex (disorder),y,direct mapping +94227002,Secondary malignant neoplasm of bronchopulmonary lymph nodes (disorder),y,direct mapping +94392001,Secondary malignant neoplasm of lymph node (disorder),y,direct mapping +285633009,Metastasis to soft tissue of unknown primary (disorder),y,direct mapping +94225005,Secondary malignant neoplasm of brain (disorder),y,direct mapping +187941007,Malignant neoplasm of carpal bone - trapezium (disorder),y,direct mapping +187838002,"Malignant neoplasm, overlapping lesion of accessory sinuses (disorder)",y,direct mapping +363457009,Malignant tumor of renal pelvis (disorder),y,direct mapping +94638008,Secondary malignant neoplasm of tongue (disorder),y,direct mapping +187601000,"Malignant neoplasm of upper lip, lipstick area (disorder)",y,direct mapping +187776004,Malignant neoplasm of intrahepatic canaliculi (disorder),y,direct mapping +77455004,Pleomorphic rhabdomyosarcoma (morphologic abnormality),y,direct mapping +254412006,Malignant tumor of tip of tongue (disorder),y,direct mapping +115232000,Mesothelial neoplasm (morphologic abnormality),y,direct mapping +188046002,Malignant melanoma of neck (disorder),y,direct mapping +276827001,Malignant glioma of spinal cord (disorder),y,direct mapping +188042000,Malignant melanoma of temple (disorder),y,direct mapping +187697007,Malignant tumor of pharyngeal recess (disorder),y,direct mapping +363383000,Malignant tumor of upper gingiva (disorder),y,direct mapping +254917006,Papillary cystadenocarcinoma of kidney (disorder),y,direct mapping +94410007,Secondary malignant neoplasm of mesenteric lymph nodes (disorder),y,direct mapping +712837004,Active surveillance of prostate cancer (regime/therapy),y,direct mapping +419052002,Malignant tumor of urinary system (disorder),y,direct mapping +188198003,Malignant neoplasm of overlapping lesion of corpus uteri (disorder),y,direct mapping +254861002,Malignant granulosa cell tumor of ovary (disorder),y,direct mapping +188204000,Malignant neoplasm of round ligament (disorder),y,direct mapping +7010000,Carcinomatosis (morphologic abnormality),y,direct mapping +275399006,Malignant tumor of lipstick area of lip (disorder),y,direct mapping +372087000,Primary malignant neoplasm (disorder),y,direct mapping +188327005,Malignant neoplasm of peripheral nerve of pelvis (disorder),y,direct mapping +83118000,Malignant rhabdoid tumor (morphologic abnormality),y,direct mapping +301036008,Disseminated adenocarcinoma (morphologic abnormality),y,direct mapping +363515000,Malignant tumor of male genital organ (disorder),y,direct mapping +255119002,Lymphangitis carcinomatosa (disorder),y,direct mapping +94493005,Secondary malignant neoplasm of pleura (disorder),y,direct mapping +51549004,"Leiomyosarcoma, no subtype (morphologic abnormality)",y,direct mapping +109823006,Overlapping malignant neoplasm of tongue (disorder),y,direct mapping +255087006,Malignant polyp of biliary tract (disorder),y,direct mapping +187845002,Malignant neoplasm of cuneiform cartilage (disorder),y,direct mapping +285604008,Metastasis to lung of unknown primary (disorder),y,direct mapping +93990005,Primary malignant neoplasm of rib (disorder),y,direct mapping +47107000,Basophil carcinoma (morphologic abnormality),y,direct mapping +188243001,Malignant neoplasm of posterior wall of urinary bladder (disorder),y,direct mapping +363461003,Malignant tumor of eye (disorder),y,direct mapping +21912003,"Malignant teratoma, intermediate (morphologic abnormality)",y,direct mapping +253071005,Mixed oligoastrocytoma (morphologic abnormality),y,direct mapping +188189001,"Malignant neoplasm of corpus uteri, excluding isthmus (disorder)",y,direct mapping +188180002,"Malignant neoplasm, overlapping lesion of cervix uteri (disorder)",y,direct mapping +363443007,Malignant tumor of ovary (disorder),y,direct mapping +900006,Mucin-producing adenocarcinoma (morphologic abnormality),y,direct mapping +187809000,Malignant neoplasm of mesocolon (disorder),y,direct mapping +254829001,Liposarcoma (disorder),y,direct mapping +255004001,Malignant melanoma of conjunctiva (disorder),y,direct mapping +255078002,"Malignant tumor of esophagus, stomach and duodenum (disorder)",y,direct mapping +363463000,Malignant tumor of conjunctiva (disorder),y,direct mapping +1090261000000108,Malignant neoplasm of descended testis (disorder),y,direct mapping +255052006,Malignant tumor of unknown origin (disorder),y,direct mapping +18861007,"Granulosa cell tumor, malignant (morphologic abnormality)",y,direct mapping +310526005,Malignant tumor of soft tissue of back (disorder),y,direct mapping +188273005,Malignant neoplasm of lacrimal sac (disorder),y,direct mapping +269460009,Malignant tumor of greater curve of stomach (disorder),y,direct mapping +63373002,Lymphangiosarcoma (morphologic abnormality),y,direct mapping +94254004,Secondary malignant neoplasm of choroid (disorder),y,direct mapping +255016007,Adenocarcinoma of pigmented epithelium of ciliary body (disorder),y,direct mapping +255015006,Malignant melanoma of ciliary body (disorder),y,direct mapping +187791002,Malignant tumor of body of pancreas (disorder),y,direct mapping +188280007,Malignant neoplasm of cerebrum (excluding lobes and ventricles) (disorder),y,direct mapping +363348004,Malignant tumor of lip (disorder),y,direct mapping +63449009,Alveolar rhabdomyosarcoma (morphologic abnormality),y,direct mapping +93225001,Malignant melanoma of skin of face (disorder),y,direct mapping +271468000,Malignant neoplasm of genitourinary organ (disorder),y,direct mapping +278024000,Rhabdomyosarcoma of bladder (disorder),y,direct mapping +94642006,Secondary malignant neoplasm of tracheobronchial lymph nodes (disorder),y,direct mapping +25370001,Hepatocellular carcinoma (morphologic abnormality),y,direct mapping +254434008,Carcinoma of hard palate (disorder),y,direct mapping +81622000,Carcinoid tumor no International Classification of Diseases for Oncology subtype (morphologic abnormality),y,direct mapping +188247000,"Malignant neoplasm, overlapping lesion of bladder (disorder)",y,direct mapping +16090008,Myxoid leiomyosarcoma (morphologic abnormality),y,direct mapping +421249001,Malignant tumor of vermilion border of lip (disorder),y,direct mapping +187810005,Malignant neoplasm of mesocecum (disorder),y,direct mapping +363491008,Malignant tumor of cloacogenic zone (disorder),y,direct mapping +237252008,Placental site trophoblastic tumor (disorder),y,direct mapping +286887005,Carcinoma liver and/or biliary system (disorder),y,direct mapping +188067002,Malignant melanoma of lower limb and hip (disorder),y,direct mapping +187660002,Malignant tumor of lower buccal sulcus (disorder),y,direct mapping +254547001,Carcinoma of upper third of esophagus (disorder),y,direct mapping +286900008,Carcinoma of epididymis/spermatic cord (disorder),y,direct mapping +254459004,Malignant tumor of anterior pillar of fauces (disorder),y,direct mapping +188220005,Malignant tumor of ectopic testis (disorder),y,direct mapping +109878000,Overlapping malignant neoplasm of female genital organs (disorder),y,direct mapping +188281006,Malignant neoplasm of basal ganglia (disorder),y,direct mapping +315004001,Metastasis from malignant tumor of breast (disorder),y,direct mapping +187968007,Malignant neoplasm of medial cuneiform (disorder),y,direct mapping +21589007,"Ependymoma, anaplastic (morphologic abnormality)",y,direct mapping +109948008,"Overlapping malignant neoplasm of eye and adnexa, primary (disorder)",y,direct mapping +188241004,Malignant neoplasm of lateral wall of urinary bladder (disorder),y,direct mapping +187736009,Malignant tumor of pylorus (disorder),y,direct mapping +41607009,Renal cell carcinoma (morphologic abnormality),y,direct mapping +188266000,Malignant neoplasm of sclera (disorder),y,direct mapping +363459007,Malignant tumor of urethra (disorder),y,direct mapping +956511000000107,Malignant melanoma stage IV M1a (finding),y,direct mapping +187606005,Malignant tumor of upper labial mucosa (disorder),y,direct mapping +1090091000000108,Secondary malignant neoplasm of internal mammary lymph nodes (disorder),y,direct mapping +67280001,Dedifferentiated liposarcoma (morphologic abnormality),y,direct mapping +49937004,"Kaposi's sarcoma, morphology (morphologic abnormality)",y,direct mapping +372151005,Sarcoma - category (morphologic abnormality),y,direct mapping +94531007,Secondary malignant neoplasm of scrotum (disorder),y,direct mapping +1090971000000105,Malignant neoplasm of posterior wall of stomach (disorder),y,direct mapping +372062007,Malignant neoplasm of central nervous system (disorder),y,direct mapping +93814004,Primary malignant neoplasm of glomus jugulare (disorder),y,direct mapping +363359008,Malignant tumor of middle ear (disorder),y,direct mapping +188071004,Malignant melanoma of popliteal fossa area (disorder),y,direct mapping +363464006,Malignant tumor of cornea (disorder),y,direct mapping +254539001,Carcinoma of thoracic part of esophagus (disorder),y,direct mapping +26888009,"Odontogenic tumor, malignant (morphologic abnormality)",y,direct mapping +363384006,Malignant tumor of lower gingiva (disorder),y,direct mapping +42392001,Epithelioid leiomyosarcoma (morphologic abnormality),y,direct mapping +2142002,Nodular melanoma (morphologic abnormality),y,direct mapping +255093003,Malignant skin tumor with adnexal differentiation (disorder),y,direct mapping +254969001,Malignant tumor of olfactory tract (disorder),y,direct mapping +956411000000108,Malignant melanoma stage IIC (finding),y,direct mapping +302849000,Nephroblastoma (disorder),y,direct mapping +187801002,Malignant tumor of peritoneum and retroperitoneum (disorder),y,direct mapping +109347009,Overlapping malignant neoplasm of bone and articular cartilage (disorder),y,direct mapping +188177003,Malignant neoplasm of endocervical gland (disorder),y,direct mapping +372108006,Malignant neoplasm of bone of lower limb (disorder),y,direct mapping +21008007,Cystadenocarcinoma (morphologic abnormality),y,direct mapping +44474009,Malignant melanoma in Hutchinson's melanotic freckle (morphologic abnormality),y,direct mapping +314960002,Local recurrence of malignant tumor of esophagus (disorder),y,direct mapping +713572001,Malignant neoplastic disease co-occurrent with human immunodeficiency virus infection (disorder),y,direct mapping +94391008,Secondary malignant neoplasm of lung (disorder),y,direct mapping +423973006,"Carcinoma of uterine cervix, invasive (disorder)",y,direct mapping +254553001,Carcinoma of cardia (disorder),y,direct mapping +188274004,Malignant neoplasm of nasolacrimal duct (disorder),y,direct mapping +187752007,Malignant tumor of Meckel's diverticulum (disorder),y,direct mapping +363487003,Malignant tumor of aryepiglottic fold - laryngeal aspect (disorder),y,direct mapping +309245001,Adenocarcinoma of uterus (disorder),y,direct mapping +254900004,Carcinoma of prostate (disorder),y,direct mapping +187633009,Malignant neoplasm of dorsal surface of tongue (disorder),y,direct mapping +109388009,Kaposi's sarcoma of palate (disorder),y,direct mapping +94452002,Secondary malignant neoplasm of optic nerve (disorder),y,direct mapping +188302003,Malignant neoplasm of tapetum (disorder),y,direct mapping +363407001,Malignant tumor of hepatic flexure (disorder),y,direct mapping +363509000,Malignant tumor of small intestine (disorder),y,direct mapping +400011005,Leiomyosarcoma - category (morphologic abnormality),y,direct mapping +4590003,"Adenocarcinoma, metastatic (morphologic abnormality)",y,direct mapping +307601000,Pseudomyxoma peritonei (disorder),y,direct mapping +413742003,Cancer pain and symptom management (procedure),y,direct mapping +254530002,Malignant tumor of parapharyngeal space (disorder),y,direct mapping +28047004,Embryonal carcinoma (morphologic abnormality),y,direct mapping +702391001,Renal cell carcinoma (disorder),y,direct mapping +363355002,Malignant tumor of adrenal gland (disorder),y,direct mapping +255086002,Carcinoma common bile duct (disorder),y,direct mapping +372244006,Malignant melanoma (disorder),y,direct mapping +188478004,Malignant neoplasms of independent (primary) multiple sites (disorder),y,direct mapping +428905002,Malignant neoplasm of gastrointestinal tract (disorder),y,direct mapping +253094006,Melanotic malignant peripheral nerve sheath tumor (morphologic abnormality),y,direct mapping +188013008,Malignant neoplasm of connective and soft tissues of thoracic spine (disorder),y,direct mapping +449066004,Malignant neoplasm of upper respiratory tract (disorder),y,direct mapping +301756000,Adenocarcinoma of sigmoid colon (disorder),y,direct mapping +363495004,Malignant tumor of muscle (disorder),y,direct mapping +187682009,"Malignant neoplasm of epiglottis, free border (disorder)",y,direct mapping +94575006,Secondary malignant neoplasm of skin of trunk (disorder),y,direct mapping +112683004,Pleomorphic liposarcoma (morphologic abnormality),y,direct mapping +255090000,Malignant neoplasm of carpal bones (disorder),y,direct mapping +72174007,"Follicular adenocarcinoma, trabecular (morphologic abnormality)",y,direct mapping +71985006,Carcinomatous myopathic syndrome (disorder),y,direct mapping +188292007,Malignant tumor of choroid plexus (disorder),y,direct mapping +109847004,Overlapping malignant neoplasm of biliary tract (disorder),y,direct mapping +405843009,Widespread metastatic malignant neoplastic disease (disorder),y,direct mapping +255030002,Mixed follicular and papillary thyroid carcinoma (disorder),y,direct mapping +188038003,Malignant melanoma of chin (disorder),y,direct mapping +90282004,Papillary serous cystadenocarcinoma (morphologic abnormality),y,direct mapping +274902006,Combined hepatocellular carcinoma and cholangiocarcinoma (disorder),y,direct mapping +281560004,Neuroblastoma of brain (disorder),y,direct mapping +315003007,Metastasis from malignant tumor of esophagus (disorder),y,direct mapping +187732006,Malignant tumor of cardia (disorder),y,direct mapping +369748008,Diffusely infiltrative (linitis plastica) tumor configuration (finding),y,direct mapping +187698002,Malignant tumor of opening of auditory tube (disorder),y,direct mapping +285643007,Metastasis to adrenal gland of unknown primary (disorder),y,direct mapping +285598005,Metastasis to trachea of unknown primary (disorder),y,direct mapping +254564003,Carcinoma in situ of lesser curve of stomach (disorder),y,direct mapping +1090271000000101,Malignant neoplasm of ventral surface of tongue (disorder),y,direct mapping +187944004,Malignant neoplasm of carpal bone - hamate (disorder),y,direct mapping +1090871000000102,Malignant neoplasm of bone and articular cartilage of limb (disorder),y,direct mapping +363460002,Malignant tumor of paraurethral gland (disorder),y,direct mapping +314976006,Local recurrence of malignant melanoma of skin (disorder),y,direct mapping +14269005,Embryonal rhabdomyosarcoma (morphologic abnormality),y,direct mapping +93651008,Malignant melanoma of skin of trunk (disorder),y,direct mapping +134421000,Pathological fracture due to metastatic bone disease (disorder),y,direct mapping +93769007,Primary malignant neoplasm of cuboid (disorder),y,direct mapping +48460009,Malignant giant cell tumor of soft parts (morphologic abnormality),y,direct mapping +94475009,Secondary malignant neoplasm of parotid lymph nodes (disorder),y,direct mapping +94432003,Secondary malignant neoplasm of muscle (disorder),y,direct mapping +269579005,Malignant melanoma of trunk (disorder),y,direct mapping +51757004,"Desmoplastic melanoma, malignant (morphologic abnormality)",y,direct mapping +94628003,Secondary malignant neoplasm of retroperitoneum (disorder),y,direct mapping +75622000,Myxoid chondrosarcoma (morphologic abnormality),y,direct mapping +188051008,Malignant melanoma of buttock (disorder),y,direct mapping +188070003,Malignant melanoma of knee (disorder),y,direct mapping +276975007,Carcinoma of larynx (disorder),y,direct mapping +254895003,Squamous cell carcinoma of vulva (disorder),y,direct mapping +188459004,Secondary malignant neoplasm of skin of hip and leg (disorder),y,direct mapping +94459006,Secondary malignant neoplasm of pancreas (disorder),y,direct mapping +363398003,Malignant tumor of lateral wall of nasopharynx (disorder),y,direct mapping +443677002,Seminoma - category (morphologic abnormality),y,direct mapping +39000009,Hemangiosarcoma (morphologic abnormality),y,direct mapping +363486007,Malignant tumor of vocal cord (disorder),y,direct mapping +20955008,"Insulinoma, malignant (morphologic abnormality)",y,direct mapping +188458007,Secondary malignant neoplasm of skin of shoulder and arm (disorder),y,direct mapping +49430005,"Liposarcoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +307599002,Sebaceous adenocarcinoma (disorder),y,direct mapping +187681002,Malignant neoplasm of anterior epiglottis (disorder),y,direct mapping +255124004,Metastasis to peripheral nerve (disorder),y,direct mapping +285605009,Metastasis to pleura of unknown primary (disorder),y,direct mapping +187701005,Malignant neoplasm of floor of nasopharynx (disorder),y,direct mapping +254874008,Dysgerminoma of ovary (disorder),y,direct mapping +64059005,Spongioneuroblastoma (morphologic abnormality),y,direct mapping +254940005,Oligodendroglioma of brain (disorder),y,direct mapping +254733003,Malignant melanoma arising in intradermal nevus (disorder),y,direct mapping +94566009,Secondary malignant neoplasm of skin of neck (disorder),y,direct mapping +187694000,Malignant tumor of adenoid (disorder),y,direct mapping +275266006,Metastasis to digestive organs (disorder),y,direct mapping +253093000,Epithelioid malignant nerve sheath tumor (morphologic abnormality),y,direct mapping +286896005,"Carcinoma breast - lower, outer quadrant (disorder)",y,direct mapping +278044006,Malignant neuroma of mediastinum (disorder),y,direct mapping +50422007,Bile duct cystadenocarcinoma (morphologic abnormality),y,direct mapping +94000008,Primary malignant neoplasm of sebaceous gland (disorder),y,direct mapping +188297001,Malignant neoplasm of midbrain (disorder),y,direct mapping +712750007,Malignant neoplasm of chest wall (disorder),y,direct mapping +254980001,Malignant tumor of acoustic vestibular nerve (disorder),y,direct mapping +6492006,Klatskin's tumor (morphologic abnormality),y,direct mapping +109358000,Overlapping malignant neoplasm of ill-defined site (disorder),y,direct mapping +255008003,Squamous cell carcinoma of cornea (disorder),y,direct mapping +254908006,Malignant tumor of skin of penis (disorder),y,direct mapping +363454002,Malignant tumor of scrotum (disorder),y,direct mapping +254427006,Carcinoma of anterior part of floor of mouth (disorder),y,direct mapping +254897006,Sarcoma of vulva (disorder),y,direct mapping +1090121000000109,Secondary malignant neoplasm of deep cervical lymph nodes (disorder),y,direct mapping +188064009,Malignant melanoma of finger (disorder),y,direct mapping +187658004,Malignant tumor of vestibule of mouth (disorder),y,direct mapping +63264007,Carcinosarcoma (morphologic abnormality),y,direct mapping +94336001,Secondary malignant neoplasm of iliac lymph nodes (disorder),y,direct mapping +363471001,Malignant neoplasm of cerebral ventricles (disorder),y,direct mapping +188469005,Secondary malignant neoplasm of cervix uteri (disorder),y,direct mapping +27461004,Immunoproliferative small intestinal disease (morphologic abnormality),y,direct mapping +720006006,Cancer care review (procedure),y,direct mapping +403946000,Paget's disease of nipple (disorder),y,direct mapping +255108000,Carcinoma of bladder (disorder),y,direct mapping +93223008,Malignant melanoma of skin of eyebrow (disorder),y,direct mapping +187997005,Malignant neoplasm of connective and soft tissue of thumb (disorder),y,direct mapping +45410002,Acinar cell carcinoma (morphologic abnormality),y,direct mapping +28325008,Polyembryoma (morphologic abnormality),y,direct mapping +294301000000103,Bowel cancer detected by national screening programme (disorder),y,direct mapping +2221008,"Mesonephroma, malignant (morphologic abnormality)",y,direct mapping +253014007,Malignant endometrioid tumor (morphologic abnormality),y,direct mapping +94361000000105,Breast cancer detected by national screening programme (disorder),y,direct mapping +187996001,Malignant neoplasm of connective and soft tissue of finger (disorder),y,direct mapping +254417000,Carcinoma of frenum linguae (disorder),y,direct mapping +254916002,Cystadenocarcinoma of kidney (disorder),y,direct mapping +188296005,Malignant neoplasm of medulla oblongata (disorder),y,direct mapping +93973004,Primary malignant neoplasm of presacral region (disorder),y,direct mapping +1014611000000103,Squamous cell carcinoma antigen level (observable entity),y,direct mapping +276828006,Glioblastoma multiforme of brain (disorder),y,direct mapping +363409003,Malignant tumor of descending colon (disorder),y,direct mapping +94327000,Secondary malignant neoplasm of heart (disorder),y,direct mapping +78303004,"Meningioma, malignant (morphologic abnormality)",y,direct mapping +315007008,Metastasis from malignant tumor of thyroid (disorder),y,direct mapping +369775001,Gleason Score 2-4: Well differentiated (finding),y,direct mapping +254404003,Carcinoma of commissure of lip (disorder),y,direct mapping +94351005,Secondary malignant neoplasm of intrathoracic lymph nodes (disorder),y,direct mapping +254872007,Embryonal carcinoma of ovary (disorder),y,direct mapping +447949005,Malignant epithelial neoplasm of cheek (disorder),y,direct mapping +275397008,Carcinoma of midline of tongue (disorder),y,direct mapping +188073001,Malignant melanoma of ankle (disorder),y,direct mapping +94408005,Secondary malignant neoplasm of mediastinal lymph nodes (disorder),y,direct mapping +188192002,Malignant neoplasm of endometrium of corpus uteri (disorder),y,direct mapping +188256008,Malignant neoplasm of overlapping lesion of urinary organs (disorder),y,direct mapping +285310000,Carcinoma of anal canal (disorder),y,direct mapping +187828007,"Malignant neoplasm of nasal cavities, middle ear and accessory sinuses (disorder)",y,direct mapping +254972008,Malignant tumor of optic nerve and sheath (disorder),y,direct mapping +188151006,Malignant neoplasm of central part of female breast (disorder),y,direct mapping +956351000000100,Malignant melanoma stage IB (finding),y,direct mapping +8145008,"Mixed tumor, malignant (morphologic abnormality)",y,direct mapping +62383007,Mixed type rhabdomyosarcoma (morphologic abnormality),y,direct mapping +363475005,Malignant tumor of spinal cord (disorder),y,direct mapping +187995002,Malignant neoplasm of connective and soft tissue of hand (disorder),y,direct mapping +254383006,International Federation of Gynecology and Obstetrics staging system of gynecological malignancy (tumor staging),y,direct mapping +1090981000000107,Malignant neoplasm of anterior wall of stomach (disorder),y,direct mapping +1090191000000107,Secondary malignant neoplasm of coeliac lymph nodes (disorder),y,direct mapping +255075004,Malignant tumor of lateral nasal wall (disorder),y,direct mapping +89623007,"Mesenchymoma, malignant (morphologic abnormality)",y,direct mapping +188022009,Malignant neoplasm of connective and soft tissue of perineum (disorder),y,direct mapping +754351000000100,Grade 1 (Stage pTa) papillary urothelial/transitional cell carcinoma (morphologic abnormality),y,direct mapping +363451005,Malignant tumor of glans penis (disorder),y,direct mapping +93916003,Primary malignant neoplasm of nasal bone (disorder),y,direct mapping +285608006,Metastasis to thymus of unknown primary (disorder),y,direct mapping +1090891000000103,Malignant neoplasm of connective and soft tissues of trunk (disorder),y,direct mapping +286891000,Carcinoma of skin of head/neck (disorder),y,direct mapping +767047005,Melanotic neuroectodermal tumor of infancy (disorder),y,direct mapping +254555008,Carcinoma of fundus of stomach (disorder),y,direct mapping +363403002,Malignant tumor of duodenum (disorder),y,direct mapping +187634003,Malignant tumor of anterior two-thirds of tongue - dorsal surface (disorder),y,direct mapping +188269007,Malignant neoplasm of extraocular muscle of orbit (disorder),y,direct mapping +254904008,Carcinoma of glans penis (disorder),y,direct mapping +188159008,Malignant neoplasm of ectopic site of female breast (disorder),y,direct mapping +65646006,"Malignant teratoma, trophoblastic (morphologic abnormality)",y,direct mapping +278054005,Lobular carcinoma of breast (disorder),y,direct mapping +188168005,Malignant neoplasm of ectopic site of male breast (disorder),y,direct mapping +303194003,Metastasis to head and neck lymph node (disorder),y,direct mapping +269469005,Malignant neoplasm of soft tissue (disorder),y,direct mapping +128783001,Askin tumor (morphologic abnormality),y,direct mapping +12323008,"Androblastoma, malignant (morphologic abnormality)",y,direct mapping +95214007,Primary malignant neoplasm of liver (disorder),y,direct mapping +363370001,Malignant neoplasm of mesentery (disorder),y,direct mapping +94477001,Secondary malignant neoplasm of pectoral axillary lymph nodes (disorder),y,direct mapping +254582000,Adenocarcinoma of rectum (disorder),y,direct mapping +276954004,Squamous cell carcinoma of floor of mouth (disorder),y,direct mapping +189643000,Papillary and follicular adenocarcinoma (morphologic abnormality),y,direct mapping +238636003,Malignant acanthosis nigricans (disorder),y,direct mapping +312111009,Carcinoma of ascending colon (disorder),y,direct mapping +189849004,Dermoid cyst with malignant transformation (morphologic abnormality),y,direct mapping +278053004,Intraductal carcinoma of breast (disorder),y,direct mapping +275395000,Carcinoma anterior 2/3 tongue ventrum (disorder),y,direct mapping +188061001,Malignant melanoma of upper arm (disorder),y,direct mapping +363351006,Malignant tumor of rectum (disorder),y,direct mapping +69515008,Ganglioneuroblastoma (morphologic abnormality),y,direct mapping +109368005,Overlapping malignant neoplasm of hypopharynx (disorder),y,direct mapping +276953005,Squamous cell carcinoma of gum (disorder),y,direct mapping +314966008,Local recurrence of malignant tumor of rectum (disorder),y,direct mapping +314955001,Local recurrence of malignant tumor of breast (disorder),y,direct mapping +278042005,Malignant teratoma of mediastinum (disorder),y,direct mapping +285606005,Metastasis to heart of unknown primary (disorder),y,direct mapping +188163001,Malignant neoplasm of nipple and areola of male breast (disorder),y,direct mapping +363506007,Malignant tumor of nasal sinuses (disorder),y,direct mapping +956431000000100,Malignant melanoma stage IIIA (finding),y,direct mapping +285638000,Metastasis to vagina of unknown primary (disorder),y,direct mapping +363431006,Malignant tumor of laryngeal cartilage (disorder),y,direct mapping +54124005,"Epithelioid hemangioendothelioma, malignant (morphologic abnormality)",y,direct mapping +276876007,Carcinoma of Bartholin's gland (disorder),y,direct mapping +28655007,"Liposarcoma, well differentiated (morphologic abnormality)",y,direct mapping +1090321000000107,Malignant neoplasm of back (disorder),y,direct mapping +188361007,Malignant neoplasm of thorax (disorder),y,direct mapping +385377005,Gleason grade finding for prostatic cancer (finding),y,direct mapping +65278006,"Epithelioid mesothelioma, malignant (morphologic abnormality)",y,direct mapping +276860003,Squamous cell carcinoma of scrotum (disorder),y,direct mapping +342511000000104,Siewert type II adenocarcinoma (disorder),y,direct mapping +255003007,Squamous cell carcinoma of conjunctiva (disorder),y,direct mapping +371965009,Malignant neoplasm of adrenal medulla (disorder),y,direct mapping +254852002,Endometrioid carcinoma ovary (disorder),y,direct mapping +187604008,"Malignant neoplasm of lower lip, external (disorder)",y,direct mapping +188268004,Malignant neoplasm of connective tissue of orbit (disorder),y,direct mapping +254423005,Carcinoma of lingual tonsil (disorder),y,direct mapping +999000,Mixed islet cell and exocrine adenocarcinoma (morphologic abnormality),y,direct mapping +253017000,Klatskin's tumor (disorder),y,direct mapping +302840001,Giant cell sarcoma (morphologic abnormality),y,direct mapping +28173006,"Follicular adenocarcinoma, well differentiated (morphologic abnormality)",y,direct mapping +188317004,Malignant neoplasm of spinal dura mater (disorder),y,direct mapping +314951005,Local recurrence of malignant tumor of tongue (disorder),y,direct mapping +255077007,Malignant tumor of digestive organ (disorder),y,direct mapping +956391000000108,Malignant melanoma stage IIB (finding),y,direct mapping +69028005,Granular cell carcinoma (morphologic abnormality),y,direct mapping +187807003,Overlapping malignant lesion of retroperitoneum and peritoneum (disorder),y,direct mapping +109824000,Overlapping malignant neoplasm of major salivary gland (disorder),y,direct mapping +188261005,"Malignant neoplasm of eyeball excluding conjunctiva, cornea, retina and choroid (disorder)",y,direct mapping +93833009,Primary malignant neoplasm of ilium (disorder),y,direct mapping +94481001,Secondary malignant neoplasm of penis (disorder),y,direct mapping +187622006,Malignant tumor of labial mucosa (disorder),y,direct mapping +363516004,Malignant tumor of penis (disorder),y,direct mapping +94681006,Secondary malignant neoplasm of vulva (disorder),y,direct mapping +8734000,Choriocarcinoma combined with other germ cell elements (morphologic abnormality),y,direct mapping +448670003,Malignant neoplasm of posterior mediastinum (disorder),y,direct mapping +57596004,Oxyphilic adenocarcinoma (morphologic abnormality),y,direct mapping +84427001,Mullerian mixed tumor (morphologic abnormality),y,direct mapping +35868009,Carcinoid syndrome (disorder),y,direct mapping +187945003,Malignant neoplasm of first metacarpal bone (disorder),y,direct mapping +254611009,Malignant tumor of endocrine pancreas (disorder),y,direct mapping +187723009,Malignant tumor of thoracic part of esophagus (disorder),y,direct mapping +64524002,Intraductal papillary adenocarcinoma with invasion (morphologic abnormality),y,direct mapping +24653009,"Spindle cell melanoma, type A (morphologic abnormality)",y,direct mapping +254503007,Malignant tumor of inferior surface of soft palate (disorder),y,direct mapping +271467005,"Malignant neoplasm of bone, connective tissue, skin and breast (disorder)",y,direct mapping +363425008,Malignant tumor of maxillary sinus (disorder),y,direct mapping +94544002,Secondary malignant neoplasm of skin of breast (disorder),y,direct mapping +1090181000000105,Secondary malignant neoplasm of inferior epigastric lymph nodes (disorder),y,direct mapping +307726001,Anemia in ovarian carcinoma (disorder),y,direct mapping +88253001,"Ameloblastoma, malignant (morphologic abnormality)",y,direct mapping +363420003,Malignant retroperitoneal tumor (disorder),y,direct mapping +68827007,Spindle cell melanoma (morphologic abnormality),y,direct mapping +372143007,Carcinoma of stomach (disorder),y,direct mapping +277782009,Malignant peritoneal local recurrence (disorder),y,direct mapping +363490009,Malignant tumor of anus (disorder),y,direct mapping +126906006,Neoplasm of prostate (disorder),y,direct mapping +254990009,Mucoepidermoid tumor of lacrimal gland (disorder),y,direct mapping +187976009,Malignant neoplasm of fourth metatarsal bone (disorder),y,direct mapping +188000002,Malignant neoplasm of connective and soft tissue of hip (disorder),y,direct mapping +12354007,"Retinoblastoma, undifferentiated (morphologic abnormality)",y,direct mapping +314992001,Metastasis from malignant tumor of cervix (disorder),y,direct mapping +28953002,Angiomyosarcoma (morphologic abnormality),y,direct mapping +94264008,Secondary malignant neoplasm of soft tissues (disorder),y,direct mapping +188030005,Malignant melanoma of lip (disorder),y,direct mapping +187969004,Malignant neoplasm of intermediate cuneiform (disorder),y,direct mapping +188339002,Malignant neoplasm of pituitary gland and craniopharyngeal duct (disorder),y,direct mapping +187804005,Malignant neoplasm of retrocecal tissue (disorder),y,direct mapping +363390005,Malignant tumor of palate (disorder),y,direct mapping +255084004,Squamous cell carcinoma of anal margin (disorder),y,direct mapping +371982006,Malignant neoplasm of endocrine gland (disorder),y,direct mapping +443520009,Chondrosarcoma (disorder),y,direct mapping +369777009,Gleason Score 8-10: Poorly differentiated (finding),y,direct mapping +363350007,Malignant tumor of cecum (disorder),y,direct mapping +86293007,Adenocarcinoid tumor (morphologic abnormality),y,direct mapping +285610008,Metastasis to large intestine of unknown primary (disorder),y,direct mapping +94073009,Primary malignant neoplasm of sternum (disorder),y,direct mapping +363476006,Malignant neoplasm of spinal meninges (disorder),y,direct mapping +285641009,Metastasis to brain of unknown primary (disorder),y,direct mapping +255073006,"Malignant tumor of ear, nose and throat (disorder)",y,direct mapping +94641004,Secondary malignant neoplasm of trachea (disorder),y,direct mapping +314967004,Local recurrence of malignant tumor of kidney (disorder),y,direct mapping +187993009,"Malignant neoplasm of connective and soft tissue, upper arm (disorder)",y,direct mapping +254462001,Carcinoma of parotid gland (disorder),y,direct mapping +166851000000104,Date cancer diagnosis received in primary care (observable entity),y,direct mapping +363378008,Malignant tumor of major salivary gland (disorder),y,direct mapping +187640005,Malignant tumor of anterior two-thirds of tongue - ventral surface (disorder),y,direct mapping +754361000000102,Grade 2 (Stage pTa) papillary urothelial/transitional cell carcinoma (morphologic abnormality),y,direct mapping +187726001,Malignant tumor of middle third of esophagus (disorder),y,direct mapping +11671000,Adenoid cystic carcinoma (morphologic abnormality),y,direct mapping +188015001,Malignant neoplasm of connective and soft tissue of abdomen (disorder),y,direct mapping +109383000,Malignant mesothelioma of pericardium (disorder),y,direct mapping +254994000,Rhabdomyosarcoma of orbit (disorder),y,direct mapping +112685006,"Carcinosarcoma, embryonal (morphologic abnormality)",y,direct mapping +255028004,Follicular thyroid carcinoma (disorder),y,direct mapping +187693006,Malignant tumor of posterior wall of nasopharynx (disorder),y,direct mapping +15619004,"Hepatocellular carcinoma, fibrolamellar (morphologic abnormality)",y,direct mapping +109369002,Overlapping malignant neoplasm of larynx (disorder),y,direct mapping +254860001,Malignant sex cord tumor of ovary (disorder),y,direct mapping +188191009,Malignant neoplasm of fundus of corpus uteri (disorder),y,direct mapping +255067005,Sarcoma of bone and connective tissue (disorder),y,direct mapping +187949009,Malignant neoplasm of fifth metacarpal bone (disorder),y,direct mapping +38549000,"Carcinoma, undifferentiated (morphologic abnormality)",y,direct mapping +1090151000000104,Secondary malignant neoplasm of mastoid lymph nodes (disorder),y,direct mapping +254878006,Endometrial carcinoma (disorder),y,direct mapping +94446003,Secondary malignant neoplasm of obturator lymph nodes (disorder),y,direct mapping +187708004,Malignant tumor aryepiglottic fold - hypopharyngeal aspect (disorder),y,direct mapping +254551004,Carcinoma of lower third of esophagus (disorder),y,direct mapping +254909003,Carcinoma of foreskin (disorder),y,direct mapping +188283009,Malignant neoplasm of corpus striatum (disorder),y,direct mapping +254431000,Carcinoma of lateral part of floor of mouth (disorder),y,direct mapping +416712009,Clear cell (mesonephric) neoplasm of ovary (disorder),y,direct mapping +416901002,Malignant medulloepithelioma of ciliary body (disorder),y,direct mapping +109885001,Overlapping malignant neoplasm of vulva (disorder),y,direct mapping +255081007,Carcinoma of cecum (disorder),y,direct mapping +187975008,Malignant neoplasm of third metatarsal bone (disorder),y,direct mapping +187742008,Malignant tumor of body of stomach (disorder),y,direct mapping +93209006,Malignant melanoma of perianal skin (disorder),y,direct mapping +31131002,"Vipoma, malignant (morphologic abnormality)",y,direct mapping +94627008,Secondary malignant neoplasm of peritoneum (disorder),y,direct mapping +17302008,Cerebellar sarcoma (morphologic abnormality),y,direct mapping +58248003,"Carcinoma, anaplastic (morphologic abnormality)",y,direct mapping +254764001,Peripheral neuroepithelioma (disorder),y,direct mapping +188001003,Malignant neoplasm of connective and soft tissue of thigh and upper leg (disorder),y,direct mapping +187946002,Malignant neoplasm of second metacarpal bone (disorder),y,direct mapping +254950006,Oligodendroglioma of spinal cord (disorder),y,direct mapping +187662005,Malignant tumor of lower labial sulcus (disorder),y,direct mapping +276870001,Carcinoma of fallopian tube (disorder),y,direct mapping +237833006,Carcinoid crisis (disorder),y,direct mapping +428322007,Malignant neoplasm of uterine adnexa (disorder),y,direct mapping +255032005,Medullary thyroid carcinoma (disorder),y,direct mapping +187918004,Malignant neoplasm of lumbar vertebra (disorder),y,direct mapping +189607006,Carcinoid tumor - morphology (morphologic abnormality),y,direct mapping +276799004,Dermatofibrosarcoma protuberans (disorder),y,direct mapping +187926007,Malignant neoplasm of costovertebral joint (disorder),y,direct mapping +1090211000000106,Secondary malignant neoplasm of circumflex iliac lymph nodes (disorder),y,direct mapping +363468009,Malignant neoplasm of temporal lobe (disorder),y,direct mapping +188282004,Malignant neoplasm of cerebral cortex (disorder),y,direct mapping +276822007,Malignant melanoma of rectum (disorder),y,direct mapping +372016004,Primary malignant neoplasm of the peritoneum (disorder),y,direct mapping +278043000,Malignant seminoma of mediastinum (disorder),y,direct mapping +271323007,"Malignant neoplasm of lip, oral cavity and/or pharynx (disorder)",y,direct mapping +254481009,Malignant tumor of middle turbinate (disorder),y,direct mapping +278060005,Endometrioid carcinoma of prostate (disorder),y,direct mapping +254609000,Carcinoma of ampulla of Vater (disorder),y,direct mapping +363417006,Malignant tumor of ampulla of Vater (disorder),y,direct mapping +254450000,Carcinoma of upper labial sulcus (disorder),y,direct mapping +312115000,Carcinoma of splenic flexure (disorder),y,direct mapping +363436001,Malignant tumor of endocardium (disorder),y,direct mapping +253000007,Neuroendocrine carcinoma (disorder),y,direct mapping +187824009,"Malignant neoplasm, overlapping lesion of digestive system (disorder)",y,direct mapping +363429002,Malignant tumor of larynx (disorder),y,direct mapping +363501002,Malignant tumor of face (disorder),y,direct mapping +372138000,Carcinoma of esophagus (disorder),y,direct mapping +58069009,Ceruminous adenocarcinoma (morphologic abnormality),y,direct mapping +363502009,Malignant tumor of axilla (disorder),y,direct mapping +94396003,Secondary malignant neoplasm of lymph nodes of multiple sites (disorder),y,direct mapping +188298006,Malignant neoplasm of pons (disorder),y,direct mapping +363467004,Malignant neoplasm of frontal lobe (disorder),y,direct mapping +188245008,Malignant tumor of ureteric orifice (disorder),y,direct mapping +31470003,Adenosarcoma (morphologic abnormality),y,direct mapping +363375006,Malignant tumor of tongue (disorder),y,direct mapping +187716008,Malignant tumor of Waldeyer's ring (disorder),y,direct mapping +188068007,Malignant melanoma of hip (disorder),y,direct mapping +2424003,"Sarcoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +302851001,Synovial sarcoma (disorder),y,direct mapping +254535007,Carcinoma of cervical part of esophagus (disorder),y,direct mapping +94344001,Secondary malignant neoplasm of intercostal lymph nodes (disorder),y,direct mapping +83950009,"Malignant tumor, giant cell type (morphologic abnormality)",y,direct mapping +187675005,Malignant tumor of tonsillar pillar (disorder),y,direct mapping +94186002,Secondary malignant neoplasm of bladder (disorder),y,direct mapping +363349007,Malignant tumor of stomach (disorder),y,direct mapping +300988009,Transitional cell carcinoma of ureter (disorder),y,direct mapping +187661003,Malignant tumor of upper labial sulcus (disorder),y,direct mapping +187948001,Malignant neoplasm of fourth metacarpal bone (disorder),y,direct mapping +187988006,Malignant neoplasm of tarsus of eyelid (disorder),y,direct mapping +254557000,Carcinoma of body of stomach (disorder),y,direct mapping +94222008,Secondary malignant neoplasm of bone (disorder),y,direct mapping +363444001,Malignant tumor of fallopian tube (disorder),y,direct mapping +363379000,Malignant tumor of parotid gland (disorder),y,direct mapping +276952000,Squamous cell carcinoma of tongue (disorder),y,direct mapping +188152004,Malignant neoplasm of upper-inner quadrant of female breast (disorder),y,direct mapping +253026002,Adenocarcinoma with metaplasia (morphologic abnormality),y,direct mapping +109912006,Overlapping malignant neoplasm of brain (disorder),y,direct mapping +188156001,Malignant neoplasm of axillary tail of female breast (disorder),y,direct mapping +88897007,"Malignant tumor, fusiform cell type (morphologic abnormality)",y,direct mapping +109264009,Overlapping malignant neoplasm of skin (disorder),y,direct mapping +312114001,Carcinoma of hepatic flexure (disorder),y,direct mapping +94442001,Secondary malignant neoplasm of nervous system (disorder),y,direct mapping +94145009,Primary malignant neoplasm of zygomatic bone (disorder),y,direct mapping +19134004,Fascial fibrosarcoma (morphologic abnormality),y,direct mapping +188239000,Malignant tumor of trigone of urinary bladder (disorder),y,direct mapping +254549003,Carcinoma of middle third of esophagus (disorder),y,direct mapping +109919002,Overlapping malignant neoplasm of peripheral nerves and autonomic nervous system (disorder),y,direct mapping +314995004,Metastasis from malignant tumor of bladder (disorder),y,direct mapping +302816009,"Malignant tumor of soft tissue of head, face and neck (disorder)",y,direct mapping +187900002,Malignant neoplasm of bones of skull and face (disorder),y,direct mapping +48554007,Enterochromaffin cell carcinoid (morphologic abnormality),y,direct mapping +188045003,Malignant melanoma of scalp (disorder),y,direct mapping +2735009,Papillary cystadenocarcinoma (morphologic abnormality),y,direct mapping +188265001,Malignant neoplasm of crystalline lens (disorder),y,direct mapping +68614005,Esthesioneuroepithelioma (morphologic abnormality),y,direct mapping +188318009,Malignant neoplasm of spinal arachnoid mater (disorder),y,direct mapping +187989003,Malignant neoplasm soft tissues of cervical spine (disorder),y,direct mapping +372064008,Malignant neoplasm of female breast (disorder),y,direct mapping +188004006,Malignant neoplasm of connective and soft tissue of foot (disorder),y,direct mapping +87992000,"Giant cell sarcoma (except of Bone, M-92503) (morphologic abnormality)",y,direct mapping +37373007,Meckel's diverticulum (disorder),y,direct mapping +363503004,Malignant tumor of upper limb (disorder),y,direct mapping +254955001,Pituitary carcinoma (disorder),y,direct mapping +277505007,Medulloblastoma of cerebellum (disorder),y,direct mapping +255037004,Parathyroid carcinoma (disorder),y,direct mapping +363415003,Malignant tumor of biliary tract (disorder),y,direct mapping +286897001,Carcinoma of breast - axillary tail (disorder),y,direct mapping +363394001,Malignant tumor of tonsillar fossa (disorder),y,direct mapping +19467007,"Teratoma, malignant, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +302817000,Malignant tumor of unknown origin or ill-defined site (disorder),y,direct mapping +428281000,Malignant neoplasm of bone (disorder),y,direct mapping +253075001,Sympathicoblastoma (morphologic abnormality),y,direct mapping +255068000,"Carcinoma of bone, connective tissue, skin and breast (disorder)",y,direct mapping +109267002,Overlapping malignant melanoma of skin (disorder),y,direct mapping +187940008,Malignant neoplasm of carpal bone - pisiform (disorder),y,direct mapping +187974007,Malignant neoplasm of second metatarsal bone (disorder),y,direct mapping +252999006,Malignant endocrine tumor morphology (morphologic abnormality),y,direct mapping +53618008,Pancreatoblastoma (morphologic abnormality),y,direct mapping +79143006,Mucinous cystadenocarcinoma (morphologic abnormality),y,direct mapping +254402004,Carcinoma of frenum of lower lip (disorder),y,direct mapping +18588008,"Synovial sarcoma, biphasic (morphologic abnormality)",y,direct mapping +363380002,Malignant tumor of submandibular gland (disorder),y,direct mapping +314993006,Metastasis from malignant tumor of uterus (disorder),y,direct mapping +363424007,Malignant tumor of mastoid air cells (disorder),y,direct mapping +253072003,Anaplastic oligoastrocytoma (morphologic abnormality),y,direct mapping +93945001,Primary malignant neoplasm of parietal bone (disorder),y,direct mapping +315001009,Metastasis from malignant tumor of gallbladder (disorder),y,direct mapping +6250003,Fibromyxosarcoma (morphologic abnormality),y,direct mapping +94573004,Secondary malignant neoplasm of skin of thigh (disorder),y,descendant of concept mapped from leaf +403895004,Squamous cell carcinoma of foot (disorder),y,descendant of concept mapped from leaf +109996008,"Myelodysplastic syndrome: Refractory anemia, without ringed sideroblasts, without excess blasts (disorder)",y,descendant of concept mapped from leaf +187870002,Malignant neoplasm of lower lobe of lung (disorder),y,descendant of concept mapped from leaf +93201009,Malignant mast cell tumor of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +372115003,"Primary malignant neoplasm of pelvic bones, sacrum and coccyx (disorder)",y,descendant of concept mapped from leaf +94647000,Secondary malignant neoplasm of trigone of urinary bladder (disorder),y,descendant of concept mapped from leaf +91161000119101,Primary adenocarcinoma of chest wall (disorder),y,descendant of concept mapped from leaf +372111007,"Carcinoma of lower lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +93748005,Primary malignant neoplasm of cerebral ventricle (disorder),y,descendant of concept mapped from leaf +720346009,Primary seminoma (morphologic abnormality),y,descendant of concept mapped from leaf +372123001,Primary malignant neoplasm of skin head and neck (disorder),y,descendant of concept mapped from leaf +363433009,Malignant tumor of pleura (disorder),y,descendant of concept mapped from leaf +717968005,Melanoma and neural system tumor syndrome (disorder),y,descendant of concept mapped from leaf +93868009,Primary malignant neoplasm of lingual tonsil (disorder),y,descendant of concept mapped from leaf +1080111000119108,Infiltrating ductal carcinoma of central portion of left female breast (disorder),y,descendant of concept mapped from leaf +93967000,Primary malignant neoplasm of postcricoid region (disorder),y,descendant of concept mapped from leaf +94448002,Secondary malignant neoplasm of occipital lobe (disorder),y,descendant of concept mapped from leaf +447708000,Malignant germ cell neoplasm of anterior mediastinum (disorder),y,descendant of concept mapped from leaf +93704000,Primary malignant neoplasm of blood vessel of neck (disorder),y,descendant of concept mapped from leaf +188736006,Subacute myeloid leukemia (disorder),y,descendant of concept mapped from leaf +423987006,"Primary malignant neoplasm of vulva, with widespread metastatic disease (disorder)",y,descendant of concept mapped from leaf +425749006,Subacute myeloid leukemia in remission (disorder),y,descendant of concept mapped from leaf +94314004,Secondary malignant neoplasm of gingival mucosa (disorder),y,descendant of concept mapped from leaf +369503006,Malignant tumor involving vagina by direct extension from uterus (disorder),y,descendant of concept mapped from leaf +94454001,Secondary malignant neoplasm of oropharynx (disorder),y,descendant of concept mapped from leaf +254652000,Clear cell squamous cell carcinoma of skin (disorder),y,descendant of concept mapped from leaf +93501005,"Hodgkin's disease, lymphocytic-histiocytic predominance of extranodal AND/OR solid organ site (disorder)",y,descendant of concept mapped from leaf +94333009,Secondary malignant neoplasm of hypopharyngeal aspect of interarytenoid fold (disorder),y,descendant of concept mapped from leaf +713609000,Invasive carcinoma of breast (disorder),y,descendant of concept mapped from leaf +94168000,Secondary malignant neoplasm of anterior portion of floor of mouth (disorder),y,descendant of concept mapped from leaf +1081781000119105,Primary seminoma of left testis (disorder),y,descendant of concept mapped from leaf +369550002,Malignant tumor involving right fallopian tube by direct extension from uterine cervix (disorder),y,descendant of concept mapped from leaf +109887009,Overlapping malignant neoplasm of male breast (disorder),y,descendant of concept mapped from leaf +404077005,Extraskeletal osteosarcoma (disorder),y,descendant of concept mapped from leaf +94256002,Secondary malignant neoplasm of clavicle (disorder),y,descendant of concept mapped from leaf +94610000,Secondary malignant neoplasm of submaxillary gland (disorder),y,descendant of concept mapped from leaf +93194002,Malignant lymphoma of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +703626001,"Anaplastic large cell lymphoma, T/Null cell, primary systemic type (disorder)",y,descendant of concept mapped from leaf +109374005,Overlapping malignant neoplasm of mediastinum and pleura (disorder),y,descendant of concept mapped from leaf +399934007,Basal cell carcinoma of preauricular skin (disorder),y,descendant of concept mapped from leaf +373091001,Primary malignant neoplasm of breast lower outer quadrant (disorder),y,descendant of concept mapped from leaf +94458003,Secondary malignant neoplasm of tonsil (disorder),y,descendant of concept mapped from leaf +187865009,Malignant neoplasm of middle lobe bronchus (disorder),y,descendant of concept mapped from leaf +128875000,Primary cutaneous CD30 antigen positive large T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +187862007,Malignant neoplasm of upper lobe of lung (disorder),y,descendant of concept mapped from leaf +93492006,"Hodgkin's disease, lymphocytic depletion of extranodal AND/OR solid organ site (disorder)",y,descendant of concept mapped from leaf +94032008,Primary malignant neoplasm of skin of lip (disorder),y,descendant of concept mapped from leaf +94476005,Secondary malignant neoplasm of patella (disorder),y,descendant of concept mapped from leaf +94319009,Secondary malignant neoplasm of great vessels (disorder),y,descendant of concept mapped from leaf +721671006,Primary neuroendocrine carcinoma of small intestine (disorder),y,descendant of concept mapped from leaf +721621008,Primary squamous cell carcinoma of overlapping lesion of esophagus (disorder),y,descendant of concept mapped from leaf +254703005,Fibroepithelioma of Pinkus (disorder),y,descendant of concept mapped from leaf +94375005,Secondary malignant neoplasm of left lower lobe of lung (disorder),y,descendant of concept mapped from leaf +715904005,Pineal parenchymal tumor of intermediate differentiation (disorder),y,descendant of concept mapped from leaf +93135004,Letterer-Siwe disease of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +448559003,Malignant teratoma of retroperitoneum (disorder),y,descendant of concept mapped from leaf +184891000119109,Primary adenocarcinoma of small intestine (disorder),y,descendant of concept mapped from leaf +402507001,Basal cell carcinoma of cheek (disorder),y,descendant of concept mapped from leaf +724060008,Malignant neoplasm of right upper lobe of lung (disorder),y,descendant of concept mapped from leaf +735385007,Microsatellite instability-high solid malignant tumor (disorder),y,descendant of concept mapped from leaf +94716000,Myeloid leukemia in remission (disorder),y,descendant of concept mapped from leaf +94041003,Primary malignant neoplasm of skin of thigh (disorder),y,descendant of concept mapped from leaf +107781000119109,Primary papillary serous cystadenocarcinoma of endometrium (disorder),y,descendant of concept mapped from leaf +99111000119103,Primary adenocarcinoma of intestinal tract (disorder),y,descendant of concept mapped from leaf +422691006,Squamous cell carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +11010461000119101,Small cell carcinoma (disorder),y,descendant of concept mapped from leaf +93663003,Primary malignant neoplasm of skin with adnexal differentiation (disorder),y,descendant of concept mapped from leaf +448254007,Non-Hodgkin's lymphoma of central nervous system (disorder),y,descendant of concept mapped from leaf +231829006,Malignant neoplasm of eyelid (disorder),y,descendant of concept mapped from leaf +417554000,Malignant teratoma of descended testis (disorder),y,descendant of concept mapped from leaf +724650000,Primary follicular dendritic cell sarcoma (disorder),y,descendant of concept mapped from leaf +369521009,Secondary malignant neoplasm of right fallopian tube (disorder),y,descendant of concept mapped from leaf +93550004,Hodgkin's sarcoma of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +128465005,Secondary malignant neoplasm of articular cartilage (disorder),y,descendant of concept mapped from leaf +94576007,Secondary malignant neoplasm of skin of umbilicus (disorder),y,descendant of concept mapped from leaf +94605004,Secondary malignant neoplasm of sternum (disorder),y,descendant of concept mapped from leaf +721644006,Primary malignant neuroendocrine neoplasm of duodenum (disorder),y,descendant of concept mapped from leaf +94192008,Secondary malignant neoplasm of blood vessel of finger (disorder),y,descendant of concept mapped from leaf +1078901000119100,Primary adenocarcinoma of upper lobe of left lung (disorder),y,descendant of concept mapped from leaf +403986008,Lymphangiosarcoma (disorder),y,descendant of concept mapped from leaf +1098981000119101,Recurrent malignant neoplasm of prostate (disorder),y,descendant of concept mapped from leaf +94133000,Primary malignant neoplasm of vas deferens (disorder),y,descendant of concept mapped from leaf +94052009,Primary malignant neoplasm of soft tissues of buttock (disorder),y,descendant of concept mapped from leaf +118600007,Malignant lymphoma (disorder),y,descendant of concept mapped from leaf +307625008,Malignant lymphoma - centrocytic (disorder),y,descendant of concept mapped from leaf +699658004,Glandular malignant peripheral nerve sheath tumor (morphologic abnormality),y,descendant of concept mapped from leaf +92683008,Carcinoma in situ of pituitary gland (disorder),y,descendant of concept mapped from leaf +372018003,Malignant neoplasm of thoracic vertebral column (disorder),y,descendant of concept mapped from leaf +449637003,Malignant melanoma of skin of upper arm (disorder),y,descendant of concept mapped from leaf +93943008,Primary malignant neoplasm of parathyroid gland (disorder),y,descendant of concept mapped from leaf +721618006,Primary squamous cell carcinoma of upper third of esophagus (disorder),y,descendant of concept mapped from leaf +93204001,"Malignant mast cell tumor of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +359640008,"Acute myeloid leukemia without maturation, FAB M1 (disorder)",y,descendant of concept mapped from leaf +402529002,Basal cell carcinoma - micronodular (disorder),y,descendant of concept mapped from leaf +448214005,Malignant epithelial neoplasm of oropharynx (disorder),y,descendant of concept mapped from leaf +721620009,Primary squamous cell carcinoma of lower third of esophagus (disorder),y,descendant of concept mapped from leaf +188589009,"Hodgkin's disease, lymphocytic depletion of lymph nodes of axilla and upper limb (disorder)",y,descendant of concept mapped from leaf +94278009,Secondary malignant neoplasm of endocardium (disorder),y,descendant of concept mapped from leaf +94420002,Secondary malignant neoplasm of muscle of face (disorder),y,descendant of concept mapped from leaf +722425009,Reactive oxygen species 1 positive non-small cell lung cancer (disorder),y,descendant of concept mapped from leaf +94587004,Secondary malignant neoplasm of soft tissues of hip (disorder),y,descendant of concept mapped from leaf +93971002,Primary malignant neoplasm of posterior wall of oropharynx (disorder),y,descendant of concept mapped from leaf +721562005,Primary adenocarcinoma overlapping lesion of retroperitoneum peritoneum and omentum (disorder),y,descendant of concept mapped from leaf +404039004,Melanotic malignant nerve sheath tumor (disorder),y,descendant of concept mapped from leaf +721575005,Primary angiosarcoma of heart (disorder),y,descendant of concept mapped from leaf +94523002,Secondary malignant neoplasm of right middle lobe of lung (disorder),y,descendant of concept mapped from leaf +402494003,Basal cell carcinoma of lower eyelid (disorder),y,descendant of concept mapped from leaf +371987000,Primary malignant neoplasm of fallopian tube (disorder),y,descendant of concept mapped from leaf +94473002,Secondary malignant neoplasm of parietal pleura (disorder),y,descendant of concept mapped from leaf +188138001,Malignant neoplasm of skin of great toe (disorder),y,descendant of concept mapped from leaf +188505000,Lymphosarcoma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +93816002,Primary malignant neoplasm of glottis (disorder),y,descendant of concept mapped from leaf +733361001,Primary mucinous adenocarcinoma of ovary (disorder),y,descendant of concept mapped from leaf +733834006,Invasive carcinoma of uterine cervix co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +93865007,Primary malignant neoplasm of upper lobe of left lung (disorder),y,descendant of concept mapped from leaf +707453008,Primary clear cell squamous cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +277629008,Diffuse malignant lymphoma - large non-cleaved cell (disorder),y,descendant of concept mapped from leaf +703577000,Papillary carcinoma of the breast (morphologic abnormality),y,descendant of concept mapped from leaf +94594001,Secondary malignant neoplasm of soft tissues of thorax (disorder),y,descendant of concept mapped from leaf +721308005,Acute leukemia of ambiguous lineage (disorder),y,descendant of concept mapped from leaf +93659005,Primary malignant neoplasm of accessory sinus (disorder),y,descendant of concept mapped from leaf +116381000119105,Ganglioneuroblastoma (disorder),y,descendant of concept mapped from leaf +443488001,Malignant neoplasm of anorectum (disorder),y,descendant of concept mapped from leaf +94645008,Secondary malignant neoplasm of trapezoid bone (disorder),y,descendant of concept mapped from leaf +67821000119109,"Primary small cell malignant neoplasm of lung, TNM stage 2 (disorder)",y,descendant of concept mapped from leaf +721569001,Primary adenocarcinoma of uterine ligament (disorder),y,descendant of concept mapped from leaf +371988005,Primary malignant neoplasm of false vocal cord (disorder),y,descendant of concept mapped from leaf +423294001,Idiopathic hypereosinophilic syndrome (disorder),y,descendant of concept mapped from leaf +707473003,Primary mucinous adenocarcinoma of trachea (disorder),y,descendant of concept mapped from leaf +369480009,Malignant tumor involving bladder by separate metastasis from uterine cervix (disorder),y,descendant of concept mapped from leaf +94087009,Primary malignant neoplasm of testis (disorder),y,descendant of concept mapped from leaf +231833004,Sebaceous adenocarcinoma of eyelid (disorder),y,descendant of concept mapped from leaf +721305008,Acute myeloid leukemia due to recurrent genetic abnormality (disorder),y,descendant of concept mapped from leaf +709471005,Periodontitis co-occurrent with leukemia (disorder),y,descendant of concept mapped from leaf +94348003,Secondary malignant neoplasm of intra-abdominal organs (disorder),y,descendant of concept mapped from leaf +722530005,Primary squamous cell carcinoma of pharyngeal tonsil (disorder),y,descendant of concept mapped from leaf +188649008,Leukemic reticuloendotheliosis of lymph nodes of inguinal region and lower limb (disorder),y,descendant of concept mapped from leaf +722682001,Primary small cell carcinoma of endometrium (disorder),y,descendant of concept mapped from leaf +847651000000100,Follicular lymphoma grade 3 (disorder),y,descendant of concept mapped from leaf +733598001,Acute myeloid leukemia with t(6;9)(p23;q34) translocation (disorder),y,descendant of concept mapped from leaf +94291005,Secondary malignant neoplasm of extrahepatic bile ducts (disorder),y,descendant of concept mapped from leaf +402509003,Basal cell carcinoma of neck (disorder),y,descendant of concept mapped from leaf +94397007,Secondary malignant neoplasm of lymph nodes of neck (disorder),y,descendant of concept mapped from leaf +722529000,Primary malignant epithelial neoplasm of nasopharynx (disorder),y,descendant of concept mapped from leaf +449077005,Malignant epithelial neoplasm of maxilla (disorder),y,descendant of concept mapped from leaf +763666008,Splenic marginal zone B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +94139001,Primary malignant neoplasm of vestibule of nose (disorder),y,descendant of concept mapped from leaf +94457008,Secondary malignant neoplasm of palatine bone (disorder),y,descendant of concept mapped from leaf +188493000,Reticulosarcoma of lymph nodes of inguinal region and lower limb (disorder),y,descendant of concept mapped from leaf +446022000,Malignant epithelial neoplasm of uterus (disorder),y,descendant of concept mapped from leaf +703609007,Myxofibrosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +448554008,Liposarcoma of connective tissue (disorder),y,descendant of concept mapped from leaf +403913006,Morpheic basal cell carcinoma (disorder),y,descendant of concept mapped from leaf +426071002,Hodgkin's disease in remission (disorder),y,descendant of concept mapped from leaf +254655003,Plantar verrucous carcinoma (disorder),y,descendant of concept mapped from leaf +714463003,Primary effusion lymphoma co-occurrent with infection caused by Human herpesvirus 8 (disorder),y,descendant of concept mapped from leaf +109937001,Primary malignant neoplasm of peripheral nerves of lower limb (disorder),y,descendant of concept mapped from leaf +94687005,Mixed cell type lymphosarcoma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +93644004,Malignant melanoma of skin of perineum (disorder),y,descendant of concept mapped from leaf +277628000,Diffuse malignant lymphoma - large cleaved cell (disorder),y,descendant of concept mapped from leaf +94479003,Secondary malignant neoplasm of pelvic peritoneum (disorder),y,descendant of concept mapped from leaf +94490008,Secondary malignant neoplasm of pisiform bone of hand (disorder),y,descendant of concept mapped from leaf +109945006,Primary malignant neoplasm of peripheral nerves of pelvis region (disorder),y,descendant of concept mapped from leaf +443757001,Lobular carcinoma in situ with microinvasion (morphologic abnormality),y,descendant of concept mapped from leaf +404142007,Primary cutaneous plasmacytoma (disorder),y,descendant of concept mapped from leaf +707490009,Primary verrucous carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +93755007,"Primary malignant neoplasm of choroid, primary (disorder)",y,descendant of concept mapped from leaf +109978004,T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +254645002,Malignant mesothelioma of pleura (disorder),y,descendant of concept mapped from leaf +94353008,Secondary malignant neoplasm of ischium (disorder),y,descendant of concept mapped from leaf +93867004,Primary malignant neoplasm of lesser curvature of stomach (disorder),y,descendant of concept mapped from leaf +93525002,Hodgkin's disease of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +766248004,Primitive neuroectodermal tumor of cervix uteri (disorder),y,descendant of concept mapped from leaf +93638003,Malignant melanoma of skin of knee (disorder),y,descendant of concept mapped from leaf +277570003,Lymphoma with spill (disorder),y,descendant of concept mapped from leaf +369464004,Malignant tumor involving ureter by separate metastasis from bladder (disorder),y,descendant of concept mapped from leaf +423447006,Malignant melanoma of skin of lower eyelid (disorder),y,descendant of concept mapped from leaf +93665005,Primary malignant neoplasm of adrenal gland (disorder),y,descendant of concept mapped from leaf +716857003,Hereditary pheochromocytoma and paraganglioma (disorder),y,descendant of concept mapped from leaf +93548007,Hodgkin's sarcoma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +448408001,Sarcoma of upper inner quadrant of female breast (disorder),y,descendant of concept mapped from leaf +310599006,Malignant neoplasm of canthus (disorder),y,descendant of concept mapped from leaf +118612006,Malignant histiocytosis (disorder),y,descendant of concept mapped from leaf +721574009,Primary rhabdomyosarcoma of male genital organ (disorder),y,descendant of concept mapped from leaf +1078961000119104,Primary adenocarcinoma of upper lobe of right lung (disorder),y,descendant of concept mapped from leaf +403922007,Balloon cell malignant melanoma (disorder),y,descendant of concept mapped from leaf +448867004,Diffuse non-Hodgkin's lymphoma of lung (disorder),y,descendant of concept mapped from leaf +402526009,Basal cell carcinoma - follicular (disorder),y,descendant of concept mapped from leaf +369473007,Malignant tumor involving bladder by direct extension from uterine cervix (disorder),y,descendant of concept mapped from leaf +369468001,Malignant tumor involving urethra by separate metastasis from prostate (disorder),y,descendant of concept mapped from leaf +707593008,Primary salivary gland-type tumour of oropharynx (disorder),y,descendant of concept mapped from leaf +94654006,Secondary malignant neoplasm of upper limb (disorder),y,descendant of concept mapped from leaf +449636007,Malignant melanoma of skin of lower leg (disorder),y,descendant of concept mapped from leaf +93640008,Malignant melanoma of skin of lip (disorder),y,descendant of concept mapped from leaf +415112005,Plasmacytoma (disorder),y,descendant of concept mapped from leaf +188562004,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of multiple sites (disorder)",y,descendant of concept mapped from leaf +763408003,Rhabdomyosarcoma of cervix uteri (disorder),y,descendant of concept mapped from leaf +735332000,Primary cutaneous diffuse large cell B-cell lymphoma of lower extremity (disorder),y,descendant of concept mapped from leaf +369527008,Malignant tumor involving left ovary by direct extension from uterine cervix (disorder),y,descendant of concept mapped from leaf +94261000,Secondary malignant neoplasm of commissure of lip (disorder),y,descendant of concept mapped from leaf +93808006,Primary malignant neoplasm of frontal sinus (disorder),y,descendant of concept mapped from leaf +698255000,Noninvasive carcinoma ex pleomorphic adenoma (morphologic abnormality),y,descendant of concept mapped from leaf +94371001,Secondary malignant neoplasm of lateral portion of floor of mouth (disorder),y,descendant of concept mapped from leaf +448319002,Diffuse non-Hodgkin's lymphoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +187864008,"Malignant neoplasm of middle lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +726652005,Malignant carcinoid tumor of thymus (disorder),y,descendant of concept mapped from leaf +449072004,Lymphoma of gastrointestinal tract (disorder),y,descendant of concept mapped from leaf +703615007,Low grade myofibroblastic sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +424334007,"Malignant tumor of spinal cord, intramedullary (disorder)",y,descendant of concept mapped from leaf +188586002,"Hodgkin's disease, lymphocytic depletion of intrathoracic lymph nodes (disorder)",y,descendant of concept mapped from leaf +733602004,Tubulocystic renal cell carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +372027002,Primary malignant neoplasm of vermilion border of upper lip (disorder),y,descendant of concept mapped from leaf +93137007,"Letterer-Siwe disease of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +93914000,Primary malignant neoplasm of myocardium (disorder),y,descendant of concept mapped from leaf +721633003,Primary adenocarcinoma of overlapping lesion of stomach (disorder),y,descendant of concept mapped from leaf +302837001,Lentigo maligna melanoma (disorder),y,descendant of concept mapped from leaf +721607006,Primary undifferentiated carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +448863000,Malignant epithelial neoplasm of pineal gland (disorder),y,descendant of concept mapped from leaf +707487003,Primary giant cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +413441006,"Acute monocytic leukemia, FAB M5b (disorder)",y,descendant of concept mapped from leaf +734015000,Clear cell papillary renal cell carcinoma (disorder),y,descendant of concept mapped from leaf +369451000,Malignant tumor involving rectum by direct extension from prostate (disorder),y,descendant of concept mapped from leaf +372014001,Primary malignant neoplasm of stomach (disorder),y,descendant of concept mapped from leaf +94621009,Secondary malignant neoplasm of temporal bone (disorder),y,descendant of concept mapped from leaf +423494003,Malignant melanoma of skin of upper eyelid (disorder),y,descendant of concept mapped from leaf +415286005,Refractory cytopenia with multilineage dysplasia and ringed sideroblasts (disorder),y,descendant of concept mapped from leaf +721716004,Primary cholangiocarcinoma of intrahepatic biliary tract (disorder),y,descendant of concept mapped from leaf +766045006,Acute myeloid leukemia and myelodysplastic syndrome related to alkylating agent (disorder),y,descendant of concept mapped from leaf +369557004,Malignant tumor involving right fallopian tube by separate metastasis from uterus (disorder),y,descendant of concept mapped from leaf +188516007,Burkitt's lymphoma of spleen (disorder),y,descendant of concept mapped from leaf +1079161000119106,Primary basal cell carcinoma of right ear (disorder),y,descendant of concept mapped from leaf +94140004,Primary malignant neoplasm of visceral pleura (disorder),y,descendant of concept mapped from leaf +403713003,Psoralen and long-wave ultraviolet radiation therapy-associated squamous cell carcinoma (disorder),y,descendant of concept mapped from leaf +372025005,Primary malignant neoplasm of vagina (disorder),y,descendant of concept mapped from leaf +1082291000119108,Transitional cell carcinoma of left ureter (disorder),y,descendant of concept mapped from leaf +94253005,Secondary malignant neoplasm of chest wall (disorder),y,descendant of concept mapped from leaf +94578008,Secondary malignant neoplasm of skin of wrist (disorder),y,descendant of concept mapped from leaf +402522006,Basal cell carcinoma of lower extremity (disorder),y,descendant of concept mapped from leaf +118606001,Hodgkin's sarcoma (disorder),y,descendant of concept mapped from leaf +440525003,Primary small cell neoplasm of thymus (disorder),y,descendant of concept mapped from leaf +765740002,Adenosarcoma of corpus uteri (disorder),y,descendant of concept mapped from leaf +188666005,Mast cell malignancy of lymph nodes of inguinal region and lower limb (disorder),y,descendant of concept mapped from leaf +94232001,Secondary malignant neoplasm of bronchus of right upper lobe (disorder),y,descendant of concept mapped from leaf +404131003,CD-30 negative T-immunoblastic cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +369479006,Malignant tumor involving bladder by separate metastasis from prostate (disorder),y,descendant of concept mapped from leaf +91854005,Acute leukemia in remission (disorder),y,descendant of concept mapped from leaf +93884005,Primary malignant neoplasm of male breast (disorder),y,descendant of concept mapped from leaf +424190005,Malignant melanoma of unknown origin (disorder),y,descendant of concept mapped from leaf +188669003,Mast cell malignancy of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +733344004,Primary squamous cell carcinoma of lip (disorder),y,descendant of concept mapped from leaf +707697002,Primary squamous cell carcinoma of hypopharyngeal aspect of aryepiglottic fold (disorder),y,descendant of concept mapped from leaf +94219006,Secondary malignant neoplasm of bone of lower limb (disorder),y,descendant of concept mapped from leaf +403742006,Arsenic-induced skin malignancy (disorder),y,descendant of concept mapped from leaf +93892001,Primary malignant neoplasm of metacarpal bone (disorder),y,descendant of concept mapped from leaf +423284006,Squamous cell carcinoma of skin of neck (disorder),y,descendant of concept mapped from leaf +722673007,Primary squamous cell carcinoma of lingual tonsil (disorder),y,descendant of concept mapped from leaf +721578007,Primary liposarcoma of male genital organ (disorder),y,descendant of concept mapped from leaf +404137004,Precursor B-cell lymphoblastic lymphoma involving skin (disorder),y,descendant of concept mapped from leaf +404121005,Generalized pagetoid reticulosis (disorder),y,descendant of concept mapped from leaf +372028007,Primary malignant neoplasm of vertebral column (disorder),y,descendant of concept mapped from leaf +94640003,Secondary malignant neoplasm of tonsillar pillar (disorder),y,descendant of concept mapped from leaf +93546006,Hodgkin's paragranuloma of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +449100005,Sarcoma of bone of pelvis (disorder),y,descendant of concept mapped from leaf +423032007,Leukemic infiltration of orbit (disorder),y,descendant of concept mapped from leaf +133881000119100,Merkel cell carcinoma of lower limb (disorder),y,descendant of concept mapped from leaf +707576008,Primary squamous cell carcinoma of subglottis (disorder),y,descendant of concept mapped from leaf +447804006,Leiomyosarcoma of connective tissue (disorder),y,descendant of concept mapped from leaf +94671007,Secondary malignant neoplasm of vas deferens (disorder),y,descendant of concept mapped from leaf +93889000,Primary malignant neoplasm of maxillary sinus (disorder),y,descendant of concept mapped from leaf +1082281000119105,Transitional cell carcinoma of left renal pelvis (disorder),y,descendant of concept mapped from leaf +733627006,Primary cutaneous gamma-delta-positive T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +94433008,Secondary malignant neoplasm of myocardium (disorder),y,descendant of concept mapped from leaf +404079008,Extraskeletal myxoid chondrosarcoma (disorder),y,descendant of concept mapped from leaf +359782004,Metastatic malignant neoplasm to apex of urinary bladder (disorder),y,descendant of concept mapped from leaf +94021008,Primary malignant neoplasm of skin of eyelid (disorder),y,descendant of concept mapped from leaf +404088004,Low-grade fibromyxoid sarcoma (disorder),y,descendant of concept mapped from leaf +307623001,Malignant lymphoma - lymphoplasmacytic (disorder),y,descendant of concept mapped from leaf +94008001,Primary malignant neoplasm of skin of ankle (disorder),y,descendant of concept mapped from leaf +707686002,Primary squamous cell carcinoma of posterior wall of hypopharynx (disorder),y,descendant of concept mapped from leaf +733352001,Primary mucinous cystic neoplasm with associated invasive carcinoma of biliary tract (disorder),y,descendant of concept mapped from leaf +397011009,Mast cell malignancy of lymph nodes (disorder),y,descendant of concept mapped from leaf +93850006,Primary malignant neoplasm of labia majora (disorder),y,descendant of concept mapped from leaf +93830007,Primary malignant neoplasm of hypopharyngeal aspect of interarytenoid fold (disorder),y,descendant of concept mapped from leaf +399521000,Necrotic melanoma (morphologic abnormality),y,descendant of concept mapped from leaf +94113004,Primary malignant neoplasm of undescended testis (disorder),y,descendant of concept mapped from leaf +449220000,Diffuse follicle center lymphoma (disorder),y,descendant of concept mapped from leaf +94266005,Secondary malignant neoplasm of cranial nerve (disorder),y,descendant of concept mapped from leaf +93854002,Primary malignant neoplasm of large intestine (disorder),y,descendant of concept mapped from leaf +402544001,Basal cell carcinoma - first recurrence (disorder),y,descendant of concept mapped from leaf +93697005,Primary malignant neoplasm of blood vessel of forearm (disorder),y,descendant of concept mapped from leaf +403910009,Circumscribed solid basal cell carcinoma (disorder),y,descendant of concept mapped from leaf +703693004,Post-radiation osteosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +276836002,Primary cerebral lymphoma (disorder),y,descendant of concept mapped from leaf +94467003,Secondary malignant neoplasm of parathyroid gland (disorder),y,descendant of concept mapped from leaf +94244003,Secondary malignant neoplasm of central portion of female breast (disorder),y,descendant of concept mapped from leaf +281702006,Tibial adamantinoma (disorder),y,descendant of concept mapped from leaf +93996004,Primary malignant neoplasm of sacrum (disorder),y,descendant of concept mapped from leaf +402820007,Basal cell carcinoma of ear (disorder),y,descendant of concept mapped from leaf +698048006,Undifferentiated nonkeratinizing squamous cell carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +1078931000119107,Primary adenocarcinoma of lower lobe of right lung (disorder),y,descendant of concept mapped from leaf +449632009,Secondary malignant neoplasm of lower leg (disorder),y,descendant of concept mapped from leaf +423295000,"Squamous cell carcinoma of lung, TNM stage 1 (disorder)",y,descendant of concept mapped from leaf +369582004,Malignant tumor involving vagina by separate metastasis from endometrium (disorder),y,descendant of concept mapped from leaf +447757002,Angiosarcoma of cheek (disorder),y,descendant of concept mapped from leaf +93193008,Malignant lymphoma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +94049001,Primary malignant neoplasm of soft palate (disorder),y,descendant of concept mapped from leaf +303057009,"Malignant lymphoma, follicular center cell, non-cleaved (disorder)",y,descendant of concept mapped from leaf +402881008,Primary cutaneous B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +763479005,Metaplastic carcinoma of breast (disorder),y,descendant of concept mapped from leaf +369528003,Malignant tumor involving left ovary by direct extension from uterus (disorder),y,descendant of concept mapped from leaf +707426009,Primary papillary squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +404155008,Granulocytic sarcoma affecting skin (disorder),y,descendant of concept mapped from leaf +448555009,Lymphoma of body of stomach (disorder),y,descendant of concept mapped from leaf +404105000,Lymphomatoid papulosis type C (anaplastic large-cell lymphoma-like) (disorder),y,descendant of concept mapped from leaf +110006004,Prolymphocytic leukemia (disorder),y,descendant of concept mapped from leaf +698646006,Acute monoblastic leukemia in remission (disorder),y,descendant of concept mapped from leaf +369554006,Malignant tumor involving right fallopian tube by separate metastasis from left fallopian tube (disorder),y,descendant of concept mapped from leaf +721627007,Malignant melanoma of esophagus (disorder),y,descendant of concept mapped from leaf +372124007,Malignant neoplasm of skin of lower limb (disorder),y,descendant of concept mapped from leaf +93880001,Primary malignant neoplasm of lung (disorder),y,descendant of concept mapped from leaf +93554008,Hodgkin's sarcoma of spleen (disorder),y,descendant of concept mapped from leaf +698287002,Malignant melanoma of gum (disorder),y,descendant of concept mapped from leaf +408648004,Squamous cell carcinoma of epiglottis (disorder),y,descendant of concept mapped from leaf +99131000119108,Astrocytoma of cerebrum (disorder),y,descendant of concept mapped from leaf +403923002,Spindle cell malignant melanoma (disorder),y,descendant of concept mapped from leaf +94284007,Secondary malignant neoplasm of epiglottis (disorder),y,descendant of concept mapped from leaf +707664003,Primary squamous cell carcinoma of glottis (disorder),y,descendant of concept mapped from leaf +443489009,Chondrosarcoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +719952009,Primary sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +707471001,Primary clear cell adenocarcinoma of trachea (disorder),y,descendant of concept mapped from leaf +720587009,Donor derived melanoma (disorder),y,descendant of concept mapped from leaf +430621000,Malignant neoplasm of lower respiratory tract (disorder),y,descendant of concept mapped from leaf +413445002,Adenocarcinoma of appendix (disorder),y,descendant of concept mapped from leaf +724058006,Malignant neoplasm of upper lobe of left lung (disorder),y,descendant of concept mapped from leaf +707406005,Primary mucoepidermoid carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +94301000,Secondary malignant neoplasm of fibula (disorder),y,descendant of concept mapped from leaf +707355002,Primary squamous cell carcinoma of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +448258005,Sarcoma of mesentery (disorder),y,descendant of concept mapped from leaf +93487009,"Hodgkin's disease, lymphocytic depletion of lymph nodes of axilla AND/OR upper limb (disorder)",y,descendant of concept mapped from leaf +703694005,Low grade central osteosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +707628004,Overlapping squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +707588005,Primary epithelial-myoepithelial carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94337005,Secondary malignant neoplasm of ilium (disorder),y,descendant of concept mapped from leaf +94205006,Secondary malignant neoplasm of blood vessel of shoulder (disorder),y,descendant of concept mapped from leaf +404090003,Malignant infiltration of oral cavity by underlying tumor (disorder),y,descendant of concept mapped from leaf +708979005,Poorly differentiated sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +94598003,Secondary malignant neoplasm of sphenoid bone (disorder),y,descendant of concept mapped from leaf +404091004,Malignant infiltration of skin by underlying tumor (disorder),y,descendant of concept mapped from leaf +425535000,Synovial sarcoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +94175004,Secondary malignant neoplasm of appendix (disorder),y,descendant of concept mapped from leaf +94413009,Secondary malignant neoplasm of middle ear (disorder),y,descendant of concept mapped from leaf +403920004,Minimal deviation malignant melanoma (disorder),y,descendant of concept mapped from leaf +404147001,Follicular center B-cell lymphoma (nodal/systemic with skin involvement) (disorder),y,descendant of concept mapped from leaf +188632001,Sézary's disease of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +446939001,Chordoma of clivus (disorder),y,descendant of concept mapped from leaf +723851008,Primary osteosarcoma of articular cartilage of limb (disorder),y,descendant of concept mapped from leaf +94138009,Primary malignant neoplasm of vestibule of mouth (disorder),y,descendant of concept mapped from leaf +94615005,Secondary malignant neoplasm of supraclavicular region (disorder),y,descendant of concept mapped from leaf +93205000,Malignant mast cell tumor of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +722954005,B-cell lymphoma unclassifiable with features intermediate between classical Hodgkin lymphoma and diffuse large B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +93792007,Primary malignant neoplasm of face (disorder),y,descendant of concept mapped from leaf +369453002,Malignant tumor involving rectum by direct extension from uterus (disorder),y,descendant of concept mapped from leaf +109915008,Primary malignant neoplasm of meninges (disorder),y,descendant of concept mapped from leaf +93797001,Primary malignant neoplasm of female genital organ (disorder),y,descendant of concept mapped from leaf +94187006,Secondary malignant neoplasm of blood vessel of abdomen (disorder),y,descendant of concept mapped from leaf +373080008,Malignant neoplasm of breast lower inner quadrant (disorder),y,descendant of concept mapped from leaf +369482001,Malignant tumor involving bladder by separate metastasis from vagina (disorder),y,descendant of concept mapped from leaf +94224009,Secondary malignant neoplasm of brain stem (disorder),y,descendant of concept mapped from leaf +94166001,Secondary malignant neoplasm of anterior aspect of epiglottis (disorder),y,descendant of concept mapped from leaf +369609004,Malignant tumor involving an organ by separate metastasis from vagina (disorder),y,descendant of concept mapped from leaf +128815007,Interdigitating dendritic cell sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +94030000,Primary malignant neoplasm of skin of knee (disorder),y,descendant of concept mapped from leaf +372026006,Primary malignant neoplasm of vermilion border of lower lip (disorder),y,descendant of concept mapped from leaf +188770007,Subacute myelomonocytic leukemia (disorder),y,descendant of concept mapped from leaf +447989004,Non-Hodgkin's lymphoma of extranodal site (disorder),y,descendant of concept mapped from leaf +707345001,Primary carcinoma of accessory sinus (disorder),y,descendant of concept mapped from leaf +109969005,"Diffuse non-Hodgkin's lymphoma, large cell (disorder)",y,descendant of concept mapped from leaf +94195005,Secondary malignant neoplasm of blood vessel of hand (disorder),y,descendant of concept mapped from leaf +94330007,Secondary malignant neoplasm of hypogastric lymph nodes (disorder),y,descendant of concept mapped from leaf +722681008,Primary mixed adenocarcinoma of endometrium (disorder),y,descendant of concept mapped from leaf +402502007,Basal cell carcinoma of tip of nose (disorder),y,descendant of concept mapped from leaf +716654007,Non-polyposis Turcot syndrome (disorder),y,descendant of concept mapped from leaf +707493006,Primary lymphoepithelial carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +94421003,Secondary malignant neoplasm of muscle of head (disorder),y,descendant of concept mapped from leaf +93907002,Primary malignant neoplasm of muscle of pelvis (disorder),y,descendant of concept mapped from leaf +369500009,Malignant tumor involving uterine cervix by separate metastasis from fallopian tube (disorder),y,descendant of concept mapped from leaf +449631002,Secondary malignant neoplasm of skin of upper arm (disorder),y,descendant of concept mapped from leaf +723281005,Primary malignant melanoma of anus (disorder),y,descendant of concept mapped from leaf +762315004,Therapy related acute myeloid leukemia due to and following administration of antineoplastic agent (disorder),y,descendant of concept mapped from leaf +277567002,T-cell prolymphocytic leukemia (disorder),y,descendant of concept mapped from leaf +707378008,Primary myoepithelial carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +277572006,Pre B-cell acute lymphoblastic leukemia (disorder),y,descendant of concept mapped from leaf +94102002,Primary malignant neoplasm of tonsillar fossa (disorder),y,descendant of concept mapped from leaf +94343007,Secondary malignant neoplasm of inner aspect of upper lip (disorder),y,descendant of concept mapped from leaf +448675008,Malignant neoplasm of digestive system (disorder),y,descendant of concept mapped from leaf +94086000,Primary malignant neoplasm of temporal lobe (disorder),y,descendant of concept mapped from leaf +722832009,Primary solid papillary carcinoma with invasion of breast (disorder),y,descendant of concept mapped from leaf +722671009,Metastatic malignant neoplasm of meninges (disorder),y,descendant of concept mapped from leaf +94078000,Primary malignant neoplasm of superior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +724648008,Plasmablastic lymphoma (disorder),y,descendant of concept mapped from leaf +302845006,"Nodular malignant lymphoma, lymphocytic - well differentiated (disorder)",y,descendant of concept mapped from leaf +93676009,Primary malignant neoplasm of anus (disorder),y,descendant of concept mapped from leaf +733144006,Malignant epithelial neoplasm of bronchus (disorder),y,descendant of concept mapped from leaf +724056005,Malignant neoplasm of lower lobe of right lung (disorder),y,descendant of concept mapped from leaf +443648003,Malignant neoplasm of ear (disorder),y,descendant of concept mapped from leaf +448775003,Sarcoma of radius (disorder),y,descendant of concept mapped from leaf +187854004,Malignant neoplasm of mucosa of trachea (disorder),y,descendant of concept mapped from leaf +188503007,Lymphosarcoma of lymph nodes of axilla and upper limb (disorder),y,descendant of concept mapped from leaf +403949007,Apocrine adenocarcinoma of skin (disorder),y,descendant of concept mapped from leaf +255131000,"Carcinoma in situ of oral cavity, lips, salivary glands (disorder)",y,descendant of concept mapped from leaf +94063007,Primary malignant neoplasm of soft tissues of trunk (disorder),y,descendant of concept mapped from leaf +371995001,Primary malignant neoplasm of larynx (disorder),y,descendant of concept mapped from leaf +441559006,Mantle cell lymphoma of spleen (disorder),y,descendant of concept mapped from leaf +93872008,Primary malignant neoplasm of long bone of upper limb (disorder),y,descendant of concept mapped from leaf +707466008,Primary adenoid cystic carcinoma of lung (disorder),y,descendant of concept mapped from leaf +369470005,Malignant tumor involving bladder by direct extension from fallopian tube (disorder),y,descendant of concept mapped from leaf +93887003,Primary malignant neoplasm of mastoid air cells (disorder),y,descendant of concept mapped from leaf +723854000,Primary Ewing sarcoma of articular cartilage of limb (disorder),y,descendant of concept mapped from leaf +93185008,Malignant histiocytosis of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +713897006,Burkitt lymphoma co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +188513004,Burkitt's lymphoma of lymph nodes of axilla and upper limb (disorder),y,descendant of concept mapped from leaf +721311006,Systemic Epstein-Barr virus positive T-cell lymphoproliferative disease of childhood (disorder),y,descendant of concept mapped from leaf +94512001,Secondary malignant neoplasm of rectovesical septum (disorder),y,descendant of concept mapped from leaf +93489007,"Hodgkin's disease, lymphocytic depletion of lymph nodes of inguinal region AND/OR lower limb (disorder)",y,descendant of concept mapped from leaf +94504009,Secondary malignant neoplasm of pubis (disorder),y,descendant of concept mapped from leaf +404151004,Leukemic infiltration of skin in myeloid leukemia (disorder),y,descendant of concept mapped from leaf +402546004,Basal cell carcinoma - third recurrence (disorder),y,descendant of concept mapped from leaf +94649002,Secondary malignant neoplasm of trunk (disorder),y,descendant of concept mapped from leaf +369476004,Malignant tumor involving bladder by separate metastasis from endometrium (disorder),y,descendant of concept mapped from leaf +423468007,"Squamous cell carcinoma of lung, TNM stage 2 (disorder)",y,descendant of concept mapped from leaf +718200007,Primary pulmonary lymphoma (disorder),y,descendant of concept mapped from leaf +448930008,Squamous cell carcinoma of nose (disorder),y,descendant of concept mapped from leaf +188580008,"Hodgkin's disease, mixed cellularity of intrapelvic lymph nodes (disorder)",y,descendant of concept mapped from leaf +707357005,Primary squamous cell carcinoma of laryngeal cartilage (disorder),y,descendant of concept mapped from leaf +94006002,Primary malignant neoplasm of sigmoid colon (disorder),y,descendant of concept mapped from leaf +94196006,Secondary malignant neoplasm of blood vessel of head (disorder),y,descendant of concept mapped from leaf +109831001,Overlapping malignant neoplasm of palate (disorder),y,descendant of concept mapped from leaf +372098004,Carcinoma of endocervix (disorder),y,descendant of concept mapped from leaf +1090881000000100,Malignant neoplasm of bronchus or lung (disorder),y,descendant of concept mapped from leaf +94228007,Secondary malignant neoplasm of bronchus of left lower lobe (disorder),y,descendant of concept mapped from leaf +93451002,"Erythroleukemia, FAB M6 (disorder)",y,descendant of concept mapped from leaf +404143002,Primary cutaneous follicular center B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +94559008,Secondary malignant neoplasm of skin of groin (disorder),y,descendant of concept mapped from leaf +448250003,Malignant teratoma of pineal region (disorder),y,descendant of concept mapped from leaf +107581000119103,Astrocytoma of brain stem (disorder),y,descendant of concept mapped from leaf +94715001,Mycosis fungoides of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +276750003,Malignant tumor of skin with pilar differentiation (disorder),y,descendant of concept mapped from leaf +107771000119106,Primary malignant clear cell neoplasm of endometrium (disorder),y,descendant of concept mapped from leaf +707581004,Primary papillary squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +400001003,Primary cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +93742006,Primary malignant neoplasm of cartilage of nose (disorder),y,descendant of concept mapped from leaf +93886007,Primary malignant neoplasm of mandible (disorder),y,descendant of concept mapped from leaf +448560008,Diffuse non-Hodgkin's lymphoma of extranodal site (disorder),y,descendant of concept mapped from leaf +403714009,Psoralen and long-wave ultraviolet radiation therapy-associated malignant melanoma (disorder),y,descendant of concept mapped from leaf +94707004,Mycosis fungoides of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +369526004,Malignant tumor involving left ovary by direct extension from right ovary (disorder),y,descendant of concept mapped from leaf +765094003,Renal medullary carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +354351000119105,Primary malignant neoplasm of left kidney (disorder),y,descendant of concept mapped from leaf +93827000,Primary malignant neoplasm of hilus of lung (disorder),y,descendant of concept mapped from leaf +128772005,Periosteal osteosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +277575008,T-cell acute lymphoblastic leukemia (disorder),y,descendant of concept mapped from leaf +93701008,Primary malignant neoplasm of blood vessel of inguinal region (disorder),y,descendant of concept mapped from leaf +722672002,Primary squamous cell carcinoma of base of tongue (disorder),y,descendant of concept mapped from leaf +87111000119109,Malignant glioma of hypothalamus (disorder),y,descendant of concept mapped from leaf +93861003,Primary malignant neoplasm of lateral wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +94120006,Primary malignant neoplasm of urachus (disorder),y,descendant of concept mapped from leaf +94179005,Secondary malignant neoplasm of ascending colon (disorder),y,descendant of concept mapped from leaf +404080006,Extraskeletal mesenchymal chondrosarcoma (disorder),y,descendant of concept mapped from leaf +423700001,Squamous cell carcinoma of auricle of ear (disorder),y,descendant of concept mapped from leaf +707586009,Primary myoepithelial carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94062002,Primary malignant neoplasm of soft tissues of thorax (disorder),y,descendant of concept mapped from leaf +133531000119104,Malignant neuroendocrine tumor (disorder),y,descendant of concept mapped from leaf +423829008,Invasive vulval Paget's disease (disorder),y,descendant of concept mapped from leaf +371986009,Primary malignant neoplasm of eye (disorder),y,descendant of concept mapped from leaf +94571002,Secondary malignant neoplasm of skin of shoulder (disorder),y,descendant of concept mapped from leaf +93807001,Primary malignant neoplasm of frontal lobe (disorder),y,descendant of concept mapped from leaf +94358004,Secondary malignant neoplasm of junctional region of epiglottis (disorder),y,descendant of concept mapped from leaf +94428009,Secondary malignant neoplasm of muscle of shoulder (disorder),y,descendant of concept mapped from leaf +721645007,Primary neuroendocrine carcinoma of duodenum (disorder),y,descendant of concept mapped from leaf +399897004,Basal cell carcinoma of postauricular skin (disorder),y,descendant of concept mapped from leaf +188591001,"Hodgkin's disease, lymphocytic depletion of intrapelvic lymph nodes (disorder)",y,descendant of concept mapped from leaf +254626006,Adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +402516002,Basal cell carcinoma of abdomen (disorder),y,descendant of concept mapped from leaf +1079191000119104,Primary basal cell carcinoma of right lower limb (disorder),y,descendant of concept mapped from leaf +448609001,Diffuse non-Hodgkin's lymphoma of ovary (disorder),y,descendant of concept mapped from leaf +702446006,Core binding factor acute myeloid leukemia (disorder),y,descendant of concept mapped from leaf +699358009,High grade endometrial stromal sarcoma (disorder),y,descendant of concept mapped from leaf +733162002,Primary malignant neuroendocrine neoplasm of anus (disorder),y,descendant of concept mapped from leaf +721698005,Primary malignant neuroendocrine neoplasm of colon (disorder),y,descendant of concept mapped from leaf +300987004,Disseminated squamous cell carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +109918005,Primary malignant neoplasm of peripheral nerves and peripheral autonomic nervous system (disorder),y,descendant of concept mapped from leaf +707465007,Primary mucoepidermoid carcinoma of lung (disorder),y,descendant of concept mapped from leaf +118613001,Hairy cell leukemia (disorder),y,descendant of concept mapped from leaf +253003009,Carcinoid bronchial adenoma (disorder),y,descendant of concept mapped from leaf +255101006,Sézary disease of skin (disorder),y,descendant of concept mapped from leaf +721709000,Primary cloacogenic carcinoma of anal canal (disorder),y,descendant of concept mapped from leaf +363517008,Malignant tumor of urinary tract proper (disorder),y,descendant of concept mapped from leaf +94028002,Primary malignant neoplasm of skin of hand (disorder),y,descendant of concept mapped from leaf +93215006,Malignant melanoma of skin of breast (disorder),y,descendant of concept mapped from leaf +739301006,Osteoporosis co-occurrent and due to multiple myeloma (disorder),y,descendant of concept mapped from leaf +372021001,Primary malignant neoplasm of trapezium (disorder),y,descendant of concept mapped from leaf +372106005,Carcinoma of penis (disorder),y,descendant of concept mapped from leaf +369508002,Malignant tumor involving vulva by direct extension from fallopian tube (disorder),y,descendant of concept mapped from leaf +94197002,Secondary malignant neoplasm of blood vessel of hip (disorder),y,descendant of concept mapped from leaf +277984002,Embryonal neuroepithelial tumor (morphologic abnormality),y,descendant of concept mapped from leaf +393563007,Glioblastoma multiforme (disorder),y,descendant of concept mapped from leaf +188627002,Mycosis fungoides of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +448388003,Sarcoma of lower outer quadrant of female breast (disorder),y,descendant of concept mapped from leaf +254634000,Squamous cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +404017001,Inflammatory malignant fibrous histiocytoma of skin (disorder),y,descendant of concept mapped from leaf +94499009,Secondary malignant neoplasm of posterior wall of oropharynx (disorder),y,descendant of concept mapped from leaf +449418000,Follicular non-Hodgkin's lymphoma of testis (disorder),y,descendant of concept mapped from leaf +424779008,Primary Kaposi's sarcoma of oral cavity (disorder),y,descendant of concept mapped from leaf +94436000,Secondary malignant neoplasm of nasal cavity (disorder),y,descendant of concept mapped from leaf +735679005,Primary chondrosarcoma of bone (disorder),y,descendant of concept mapped from leaf +403894000,Squamous cell carcinoma of skin of ear (disorder),y,descendant of concept mapped from leaf +277614006,Prethymic and thymic T-cell lymphoma/leukemia (disorder),y,descendant of concept mapped from leaf +93952004,Primary malignant neoplasm of pelvic peritoneum (disorder),y,descendant of concept mapped from leaf +94202009,Secondary malignant neoplasm of blood vessel of pelvis (disorder),y,descendant of concept mapped from leaf +721762007,Adult T-cell leukemia/lymphoma of skin (disorder),y,descendant of concept mapped from leaf +847741000000106,Diffuse large B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +448248006,Malignant neoplasm of axial suprasellar region of brain (disorder),y,descendant of concept mapped from leaf +93788000,Primary malignant neoplasm of eustachian tube (disorder),y,descendant of concept mapped from leaf +369519004,Malignant tumor involving left fallopian tube by direct extension from uterus (disorder),y,descendant of concept mapped from leaf +94708009,Mycosis fungoides of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +94629006,Secondary malignant neoplasm of thigh (disorder),y,descendant of concept mapped from leaf +847701000000108,Follicular lymphoma grade 3b (disorder),y,descendant of concept mapped from leaf +372017008,Primary malignant neoplasm of thoracic esophagus (disorder),y,descendant of concept mapped from leaf +93703006,Primary malignant neoplasm of blood vessel of lower limb (disorder),y,descendant of concept mapped from leaf +94591009,Secondary malignant neoplasm of soft tissues of pelvis (disorder),y,descendant of concept mapped from leaf +94208008,Secondary malignant neoplasm of blood vessel of toe (disorder),y,descendant of concept mapped from leaf +716657000,Familial papillary thyroid carcinoma with renal papillary neoplasia syndrome (disorder),y,descendant of concept mapped from leaf +369492009,Malignant tumor involving seminal vesicle by separate metastasis from prostate (disorder),y,descendant of concept mapped from leaf +94540006,Secondary malignant neoplasm of skin of ankle (disorder),y,descendant of concept mapped from leaf +397081004,"Mucoepidermoid carcinoma, high grade (morphologic abnormality)",y,descendant of concept mapped from leaf +94683009,Secondary malignant neoplasm of zygomatic bone (disorder),y,descendant of concept mapped from leaf +94586008,Secondary malignant neoplasm of soft tissues of head (disorder),y,descendant of concept mapped from leaf +93741004,Primary malignant neoplasm of carpal bone (disorder),y,descendant of concept mapped from leaf +29421000119105,Adenocarcinoma in adenomatous polyp (disorder),y,descendant of concept mapped from leaf +369602008,Malignant tumor involving an organ by separate metastasis from bladder (disorder),y,descendant of concept mapped from leaf +449059000,Follicular non-Hodgkin's lymphoma of uterine cervix (disorder),y,descendant of concept mapped from leaf +422736007,Primary malignant neoplasm of peripheral nerve (disorder),y,descendant of concept mapped from leaf +449309003,Malignant neoplasm of skin of scrotum (disorder),y,descendant of concept mapped from leaf +718604008,Small cell neuroendocrine carcinoma of bladder (disorder),y,descendant of concept mapped from leaf +707397008,Primary basal cell adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707398003,Primary polymorphous low grade adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +766930002,Glassy cell carcinoma of cervix uteri (disorder),y,descendant of concept mapped from leaf +93520007,Hodgkin's disease of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +188091006,Malignant neoplasm of skin of external auditory meatus (disorder),y,descendant of concept mapped from leaf +447656001,Lymphoma of pylorus of stomach (disorder),y,descendant of concept mapped from leaf +447886005,Adenocarcinoma of anorectum (disorder),y,descendant of concept mapped from leaf +94026003,Primary malignant neoplasm of skin of forehead (disorder),y,descendant of concept mapped from leaf +94545001,Secondary malignant neoplasm of skin of buttock (disorder),y,descendant of concept mapped from leaf +707531008,Primary squamous cell carcinoma of branchial cleft (disorder),y,descendant of concept mapped from leaf +415110002,Plasma cell myeloma/plasmacytoma (disorder),y,descendant of concept mapped from leaf +15956181000119102,Secondary adenocarcinoma of bilateral lungs (disorder),y,descendant of concept mapped from leaf +277545003,T-cell chronic lymphocytic leukemia (disorder),y,descendant of concept mapped from leaf +721625004,Primary neuroendocrine carcinoma of esophagus (disorder),y,descendant of concept mapped from leaf +94158005,Secondary malignant neoplasm of adenoid (disorder),y,descendant of concept mapped from leaf +369467006,Malignant tumor involving urethra by separate metastasis from bladder (disorder),y,descendant of concept mapped from leaf +707674000,Primary malignant epithelial neoplasm of trachea (disorder),y,descendant of concept mapped from leaf +735757008,Primary ganglioneuroblastoma of brain (disorder),y,descendant of concept mapped from leaf +369586001,Malignant tumor involving vagina by separate metastasis from uterus (disorder),y,descendant of concept mapped from leaf +128919000,Gangliocytoma (morphologic abnormality),y,descendant of concept mapped from leaf +734099007,Neuroblastoma of central nervous system (disorder),y,descendant of concept mapped from leaf +448451002,Sarcoma upper outer quadrant of female breast (disorder),y,descendant of concept mapped from leaf +403904009,Verrucous squamous cell carcinoma (disorder),y,descendant of concept mapped from leaf +94482008,Secondary malignant neoplasm of periadrenal tissue (disorder),y,descendant of concept mapped from leaf +93662008,Primary malignant neoplasm of adenoid (disorder),y,descendant of concept mapped from leaf +188125009,Malignant neoplasm of skin of thumb (disorder),y,descendant of concept mapped from leaf +93764002,"Primary malignant neoplasm of conjunctiva, primary (disorder)",y,descendant of concept mapped from leaf +94674004,Secondary malignant neoplasm of vermilion border of lower lip (disorder),y,descendant of concept mapped from leaf +94103007,Primary malignant neoplasm of tonsillar pillar (disorder),y,descendant of concept mapped from leaf +188675007,Malignant lymphoma - small cleaved cell (disorder),y,descendant of concept mapped from leaf +448865007,Follicular non-Hodgkin's lymphoma of skin (disorder),y,descendant of concept mapped from leaf +94245002,Secondary malignant neoplasm of cerebellum (disorder),y,descendant of concept mapped from leaf +94325008,Secondary malignant neoplasm of head of pancreas (disorder),y,descendant of concept mapped from leaf +93686005,Primary malignant neoplasm of back (disorder),y,descendant of concept mapped from leaf +444596001,Malignant thymoma (disorder),y,descendant of concept mapped from leaf +188737002,Chloroma (disorder),y,descendant of concept mapped from leaf +369566000,Malignant tumor involving right ovary by direct extension from uterus (disorder),y,descendant of concept mapped from leaf +91281000119103,Secondary adenocarcinoma of bone (disorder),y,descendant of concept mapped from leaf +93732009,Primary malignant neoplasm of bronchus of right middle lobe (disorder),y,descendant of concept mapped from leaf +449307001,Follicular non-Hodgkin's lymphoma of ovary (disorder),y,descendant of concept mapped from leaf +426217000,Aleukemic leukemia in remission (disorder),y,descendant of concept mapped from leaf +236513009,Lymphoma of kidney (disorder),y,descendant of concept mapped from leaf +708937004,"Seminoma, metastatic (morphologic abnormality)",y,descendant of concept mapped from leaf +707495004,Primary squamous cell adenoid carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +703822002,Indeterminate dendritic cell tumor (morphologic abnormality),y,descendant of concept mapped from leaf +109991003,Acute myelofibrosis (disorder),y,descendant of concept mapped from leaf +413442004,Acute monocytic/monoblastic leukemia (disorder),y,descendant of concept mapped from leaf +313353007,Squamous cell carcinoma of bronchus in left lower lobe (disorder),y,descendant of concept mapped from leaf +94050001,Primary malignant neoplasm of soft tissues of abdomen (disorder),y,descendant of concept mapped from leaf +402911002,Penile verrucous carcinoma of Buschke-Löwenstein (disorder),y,descendant of concept mapped from leaf +107791000119107,Primary adenosquamous carcinoma of endometrium (disorder),y,descendant of concept mapped from leaf +707346000,Primary carcinoma of ethmoidal sinus (disorder),y,descendant of concept mapped from leaf +128775007,Clear cell chondrosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +423607006,Adenocarcinoma of anus (disorder),y,descendant of concept mapped from leaf +94019003,Primary malignant neoplasm of skin of external auditory canal (disorder),y,descendant of concept mapped from leaf +847691000000108,Follicular lymphoma grade 3a (disorder),y,descendant of concept mapped from leaf +109927006,Primary malignant neoplasm of peripheral nerves of neck (disorder),y,descendant of concept mapped from leaf +415285009,Refractory cytopenia with multilineage dysplasia (disorder),y,descendant of concept mapped from leaf +109359008,Primary malignant neoplasm of independent multiple sites (disorder),y,descendant of concept mapped from leaf +94204005,Secondary malignant neoplasm of blood vessel of popliteal space (disorder),y,descendant of concept mapped from leaf +58961005,Lethal midline granuloma (disorder),y,descendant of concept mapped from leaf +426964009,"Non-small cell lung cancer, positive for epidermal growth factor receptor expression (disorder)",y,descendant of concept mapped from leaf +308121000,Follicular non-Hodgkin's lymphoma (disorder),y,descendant of concept mapped from leaf +698043002,Malignant melanoma of floor of mouth (disorder),y,descendant of concept mapped from leaf +93929003,Primary malignant neoplasm of oculomotor nerve (disorder),y,descendant of concept mapped from leaf +425869007,"Acute promyelocytic leukemia, FAB M3, in remission (disorder)",y,descendant of concept mapped from leaf +116811000119106,Non-Hodgkin lymphoma of central nervous system metastatic to lymph node of lower limb (disorder),y,descendant of concept mapped from leaf +420301000,"Follicular carcinoma, widely invasive (morphologic abnormality)",y,descendant of concept mapped from leaf +94492000,Secondary malignant neoplasm of placenta (disorder),y,descendant of concept mapped from leaf +128041000119107,Primary adenocarcinoma of distal third of esophagus (disorder),y,descendant of concept mapped from leaf +422782004,"Primary malignant neoplasm of ovary, with widespread metastatic disease (disorder)",y,descendant of concept mapped from leaf +726019003,Familial malignant melanoma of skin (disorder),y,descendant of concept mapped from leaf +93824007,Primary malignant neoplasm of head (disorder),y,descendant of concept mapped from leaf +707589002,Primary cystadenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707403002,Primary fetal adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +94117003,Primary malignant neoplasm of upper outer quadrant of female breast (disorder),y,descendant of concept mapped from leaf +404129007,CD-30 negative anaplastic large T-cell cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +188590000,"Hodgkin's disease, lymphocytic depletion of lymph nodes of inguinal region and lower limb (disorder)",y,descendant of concept mapped from leaf +1080981000119104,Malignant melanoma of right choroid (disorder),y,descendant of concept mapped from leaf +67811000119102,"Primary small cell malignant neoplasm of lung, TNM stage 1 (disorder)",y,descendant of concept mapped from leaf +95187002,Nodular lymphoma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +716593008,Carcinoma of salivary gland type of breast (disorder),y,descendant of concept mapped from leaf +737313007,Primary malignant neuroendocrine neoplasm of ileum (disorder),y,descendant of concept mapped from leaf +702467006,Malignant neoplasm of augmented bladder (disorder),y,descendant of concept mapped from leaf +707356001,Primary squamous cell carcinoma of frontal sinus (disorder),y,descendant of concept mapped from leaf +93151007,Hairy cell leukemia of spleen (disorder),y,descendant of concept mapped from leaf +703596001,Tubulolobular carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +93826009,Primary malignant neoplasm of hepatic flexure of colon (disorder),y,descendant of concept mapped from leaf +12240991000119102,Squamous cell carcinoma of right lung (disorder),y,descendant of concept mapped from leaf +94101009,Primary malignant neoplasm of tongue (disorder),y,descendant of concept mapped from leaf +94508007,Secondary malignant neoplasm of radius (disorder),y,descendant of concept mapped from leaf +94274006,Secondary malignant neoplasm of thoracic vertebral column (disorder),y,descendant of concept mapped from leaf +420788006,Intraocular non-Hodgkin malignant lymphoma (disorder),y,descendant of concept mapped from leaf +128773000,High grade surface osteosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +93906006,Primary malignant neoplasm of muscle of neck (disorder),y,descendant of concept mapped from leaf +371992003,Primary malignant neoplasm of intestinal tract (disorder),y,descendant of concept mapped from leaf +722684000,Primary low grade serous adenocarcinoma of ovary (disorder),y,descendant of concept mapped from leaf +713038003,Overlapping primary malignant neoplasm of bone and articular cartilage of upper limb (disorder),y,descendant of concept mapped from leaf +702977001,Follicular non-Hodgkin's lymphoma diffuse follicle center cell sub-type grade 2 (disorder),y,descendant of concept mapped from leaf +404073009,Spindle cell liposarcoma (disorder),y,descendant of concept mapped from leaf +94577003,Secondary malignant neoplasm of skin of upper limb (disorder),y,descendant of concept mapped from leaf +94013002,Primary malignant neoplasm of skin of buttock (disorder),y,descendant of concept mapped from leaf +94418000,Secondary malignant neoplasm of muscle of abdomen (disorder),y,descendant of concept mapped from leaf +93837005,Primary malignant neoplasm of inner aspect of upper lip (disorder),y,descendant of concept mapped from leaf +93904009,Primary malignant neoplasm of muscle of inguinal region (disorder),y,descendant of concept mapped from leaf +449173006,Diffuse non-Hodgkin's lymphoma of tonsil (disorder),y,descendant of concept mapped from leaf +427658007,"Acute myelomonocytic leukemia, FAB M4, in remission (disorder)",y,descendant of concept mapped from leaf +709830006,Malignant carcinoid tumor of stomach (disorder),y,descendant of concept mapped from leaf +722679006,Primary mucinous adenocarcinoma of endometrium (disorder),y,descendant of concept mapped from leaf +408649007,Squamous cell carcinoma of pharynx (disorder),y,descendant of concept mapped from leaf +190030009,Compound leukemias (disorder),y,descendant of concept mapped from leaf +94359007,Secondary malignant neoplasm of junctional zone of tongue (disorder),y,descendant of concept mapped from leaf +404008001,Dermatofibrosarcoma protuberans with myoid differentiation (disorder),y,descendant of concept mapped from leaf +94526005,Secondary malignant neoplasm of sacrococcygeal region (disorder),y,descendant of concept mapped from leaf +93197009,Malignant lymphoma of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +94460001,Secondary malignant neoplasm of pancreatic duct (disorder),y,descendant of concept mapped from leaf +405546008,Pericardial effusion co-occurrent and due to malignant neoplasm of pericardium (disorder),y,descendant of concept mapped from leaf +93959008,Primary malignant neoplasm of phalanx of foot (disorder),y,descendant of concept mapped from leaf +449497006,Sarcoma of pelvic peritoneum (disorder),y,descendant of concept mapped from leaf +94434002,Secondary malignant neoplasm of myometrium (disorder),y,descendant of concept mapped from leaf +721558004,Primary adenocarcinoma of cystic duct (disorder),y,descendant of concept mapped from leaf +93723007,Primary malignant neoplasm of bone of skull (disorder),y,descendant of concept mapped from leaf +369542006,Malignant tumor involving left fallopian tube by separate metastasis from endometrium (disorder),y,descendant of concept mapped from leaf +93227009,Malignant melanoma of skin of foot (disorder),y,descendant of concept mapped from leaf +93849006,Primary malignant neoplasm of kidney (disorder),y,descendant of concept mapped from leaf +188648000,Leukemic reticuloendotheliosis of lymph nodes of axilla and upper limb (disorder),y,descendant of concept mapped from leaf +449628003,Malignant neoplasm of long bone of lower leg (disorder),y,descendant of concept mapped from leaf +188510001,"Burkitt's lymphoma of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +707528007,Primary squamous cell carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +93820003,Primary malignant neoplasm of hamate bone (disorder),y,descendant of concept mapped from leaf +372020000,Primary malignant neoplasm of tonsil (disorder),y,descendant of concept mapped from leaf +93747000,Primary malignant neoplasm of cerebral meninges (disorder),y,descendant of concept mapped from leaf +188095002,"Malignant neoplasm of skin of cheek, external (disorder)",y,descendant of concept mapped from leaf +403915004,Basal cell carcinoma of scalp (disorder),y,descendant of concept mapped from leaf +449075002,Lymphoma of cardioesophageal junction (disorder),y,descendant of concept mapped from leaf +369469009,Malignant tumor involving bladder by direct extension from endometrium (disorder),y,descendant of concept mapped from leaf +707596000,Primary carcinosarcoma of lung (disorder),y,descendant of concept mapped from leaf +188578002,"Hodgkin's disease, mixed cellularity of lymph nodes of axilla and upper limb (disorder)",y,descendant of concept mapped from leaf +713718006,Diffuse non-Hodgkin immunoblastic lymphoma co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +371969003,Primary malignant neoplasm of apex of urinary bladder (disorder),y,descendant of concept mapped from leaf +404010004,Dermatofibrosarcoma protuberans with giant cell fibroblastoma (disorder),y,descendant of concept mapped from leaf +419842002,Squamous cell carcinoma of oral mucous membrane (disorder),y,descendant of concept mapped from leaf +723889003,B lymphoblastic leukemia lymphoma with t(9:22) (q34;q11.2); BCR-ABL 1 (disorder),y,descendant of concept mapped from leaf +93781006,Primary malignant neoplasm of endometrium (disorder),y,descendant of concept mapped from leaf +371012000,"Acute lymphoblastic leukemia, transitional pre-B-cell (disorder)",y,descendant of concept mapped from leaf +277651000,Peripheral T-cell lymphoma - pleomorphic small cell (disorder),y,descendant of concept mapped from leaf +94069006,Primary malignant neoplasm of spinal meninges (disorder),y,descendant of concept mapped from leaf +448377009,Sarcoma of sacrum (disorder),y,descendant of concept mapped from leaf +707468009,Primary mixed mucinous and non-mucinous bronchiolo-alveolar carcinoma of lung (disorder),y,descendant of concept mapped from leaf +93684008,Primary malignant neoplasm of axilla (disorder),y,descendant of concept mapped from leaf +94238002,Secondary malignant neoplasm of carina (disorder),y,descendant of concept mapped from leaf +128814006,Langerhans cell sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +733359005,Primary squamous cell carcinoma of endometrium (disorder),y,descendant of concept mapped from leaf +402536001,Basal cell carcinoma - primary (disorder),y,descendant of concept mapped from leaf +188660004,Malignant mast cell tumors (disorder),y,descendant of concept mapped from leaf +94528006,Secondary malignant neoplasm of scalene lymph nodes (disorder),y,descendant of concept mapped from leaf +1081021000119109,Malignant melanoma of skin of left lower limb (disorder),y,descendant of concept mapped from leaf +94046008,Primary malignant neoplasm of skin of wrist (disorder),y,descendant of concept mapped from leaf +372007003,Primary malignant neoplasm of retrocecal tissue (disorder),y,descendant of concept mapped from leaf +371963002,Primary malignant neoplasm of adrenal cortex (disorder),y,descendant of concept mapped from leaf +449630001,Secondary malignant neoplasm of skin of lower leg (disorder),y,descendant of concept mapped from leaf +94155008,Secondary malignant neoplasm of accessory sinus (disorder),y,descendant of concept mapped from leaf +404116007,Mycosis fungoides with systemic infiltration (disorder),y,descendant of concept mapped from leaf +277623009,Monocytoid B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +94624001,Secondary malignant neoplasm of the mesentery (disorder),y,descendant of concept mapped from leaf +449176003,Diffuse non-Hodgkin's lymphoma of intestine (disorder),y,descendant of concept mapped from leaf +188679001,Diffuse non-Hodgkin's lymphoma undifferentiated (diffuse) (disorder),y,descendant of concept mapped from leaf +94412004,Secondary malignant neoplasm of metatarsal bone (disorder),y,descendant of concept mapped from leaf +369523007,Secondary malignant neoplasm of left ovary (disorder),y,descendant of concept mapped from leaf +369452007,Malignant tumor involving rectum by direct extension from uterine cervix (disorder),y,descendant of concept mapped from leaf +269464000,"Malignant neoplasm of upper lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +302841002,Malignant lymphoma - small lymphocytic (disorder),y,descendant of concept mapped from leaf +93968005,Primary malignant neoplasm of posterior hypopharyngeal wall (disorder),y,descendant of concept mapped from leaf +93683002,Primary malignant neoplasm of ascending colon (disorder),y,descendant of concept mapped from leaf +423005002,Primary malignant neoplasm of lacrimal gland duct (disorder),y,descendant of concept mapped from leaf +94329002,Secondary malignant neoplasm of hilus of lung (disorder),y,descendant of concept mapped from leaf +707354003,Primary squamous cell carcinoma of maxillary sinus (disorder),y,descendant of concept mapped from leaf +92526009,Carcinoma in situ of adrenal cortex (disorder),y,descendant of concept mapped from leaf +403919005,Basal cell carcinoma of upper eyelid (disorder),y,descendant of concept mapped from leaf +76564002,Catecholamine secretion by pheochromocytoma (disorder),y,descendant of concept mapped from leaf +448401007,Choriocarcinoma of placenta (disorder),y,descendant of concept mapped from leaf +424052001,Small cell carcinoma carcinomatosis (disorder),y,descendant of concept mapped from leaf +93961004,Primary malignant neoplasm of pharynx (disorder),y,descendant of concept mapped from leaf +721619003,Primary squamous cell carcinoma of middle third of esophagus (disorder),y,descendant of concept mapped from leaf +93648001,Malignant melanoma of skin of temporal region (disorder),y,descendant of concept mapped from leaf +93522004,Hodgkin's disease of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +707383000,Primary mucinous cystadenocarcinoma of trachea (disorder),y,descendant of concept mapped from leaf +704152002,Metastatic neuroblastoma (disorder),y,descendant of concept mapped from leaf +733926004,Ganglioneuroblastoma of central nervous system (disorder),y,descendant of concept mapped from leaf +94115006,Primary malignant neoplasm of upper inner quadrant of female breast (disorder),y,descendant of concept mapped from leaf +109371002,Overlapping malignant neoplasm of bronchus and lung (disorder),y,descendant of concept mapped from leaf +109980005,Malignant immunoproliferative disease (disorder),y,descendant of concept mapped from leaf +423812005,Sarcoma of head and neck (disorder),y,descendant of concept mapped from leaf +723852001,Primary osteosarcoma of articular cartilage of pelvis (disorder),y,descendant of concept mapped from leaf +94718004,Myeloid sarcoma in remission (disorder),y,descendant of concept mapped from leaf +707407001,Primary signet ring cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +369520005,Primary malignant neoplasm of right fallopian tube (disorder),y,descendant of concept mapped from leaf +94411006,Secondary malignant neoplasm of metacarpal bone (disorder),y,descendant of concept mapped from leaf +1082311000119107,Transitional cell carcinoma of right ureter (disorder),y,descendant of concept mapped from leaf +707485006,Primary adenosquamous carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +93878007,Primary malignant neoplasm of lumbar vertebral column (disorder),y,descendant of concept mapped from leaf +371994002,Primary malignant neoplasm of laryngeal aspect of aryepiglottic fold (disorder),y,descendant of concept mapped from leaf +402496001,Basal cell carcinoma of lateral canthus (disorder),y,descendant of concept mapped from leaf +723848001,Primary osteosarcoma of bone of jaw (disorder),y,descendant of concept mapped from leaf +93800004,Primary malignant neoplasm of first cuneiform bone of foot (disorder),y,descendant of concept mapped from leaf +403955002,Undifferentiated adnexal carcinoma of skin (disorder),y,descendant of concept mapped from leaf +723853006,Primary Ewing sarcoma of bone of limb (disorder),y,descendant of concept mapped from leaf +703816006,"Pancreatic endocrine tumor, nonfunctioning (morphologic abnormality)",y,descendant of concept mapped from leaf +404152006,Leukemic infiltration of skin in acute myeloid leukemia (disorder),y,descendant of concept mapped from leaf +93218008,Malignant melanoma of skin of chest (disorder),y,descendant of concept mapped from leaf +60620005,Epsilon heavy chain disease (disorder),y,descendant of concept mapped from leaf +425231005,"Carcinoma of urinary bladder, superficial (disorder)",y,descendant of concept mapped from leaf +93136003,Letterer-Siwe disease of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +230156002,Malignant meningitis (disorder),y,descendant of concept mapped from leaf +733346002,Primary mucinous cystic neoplasm with associated invasive carcinoma of perihilar bile duct (disorder),y,descendant of concept mapped from leaf +372126009,Malignant neoplasm of skin of trunk (disorder),y,descendant of concept mapped from leaf +371989002,Primary malignant neoplasm of glans penis (disorder),y,descendant of concept mapped from leaf +404009009,Dermatofibrosarcoma protuberans with granular cell change (disorder),y,descendant of concept mapped from leaf +404094007,Metastasis involving oral cavity (disorder),y,descendant of concept mapped from leaf +403729006,Radiation-induced skin malignancy (disorder),y,descendant of concept mapped from leaf +118610003,"Hodgkin's disease, lymphocytic depletion (disorder)",y,descendant of concept mapped from leaf +307650006,Histiocytic medullary reticulosis (disorder),y,descendant of concept mapped from leaf +423464009,Squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +449803009,Primary malignant neoplasm of dome of urinary bladder (disorder),y,descendant of concept mapped from leaf +404068003,Sclerosing liposarcoma (disorder),y,descendant of concept mapped from leaf +94084002,Primary malignant neoplasm of tarsal bone (disorder),y,descendant of concept mapped from leaf +402540005,Basal cell carcinoma recurrent following Mohs' excision (disorder),y,descendant of concept mapped from leaf +736322001,Pediatric follicular lymphoma (disorder),y,descendant of concept mapped from leaf +93908007,Primary malignant neoplasm of muscle of perineum (disorder),y,descendant of concept mapped from leaf +96981000119102,Malignant neoplasm of rectosigmoid junction metastatic to brain (disorder),y,descendant of concept mapped from leaf +128883006,Fibroblastic liposarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +699657009,Hepatosplenic gamma-delta cell lymphoma (disorder),y,descendant of concept mapped from leaf +188728002,Aleukemic lymphoid leukemia (disorder),y,descendant of concept mapped from leaf +369540003,Malignant tumor involving right broad ligament by metastasis from ovary (disorder),y,descendant of concept mapped from leaf +313427003,Lambda light chain myeloma (disorder),y,descendant of concept mapped from leaf +118607005,"Hodgkin lymphoma, lymphocyte-rich (disorder)",y,descendant of concept mapped from leaf +187821001,Angiosarcoma of spleen (disorder),y,descendant of concept mapped from leaf +763309005,Acute myeloid leukemia with nucleophosmin 1 somatic mutation (disorder),y,descendant of concept mapped from leaf +105121000119102,Squamous cell carcinoma of vagina (disorder),y,descendant of concept mapped from leaf +93815003,Primary malignant neoplasm of glossopharyngeal nerve (disorder),y,descendant of concept mapped from leaf +94643001,Secondary malignant neoplasm of transverse colon (disorder),y,descendant of concept mapped from leaf +363358000,Malignant tumor of lung (disorder),y,descendant of concept mapped from leaf +93920004,Primary malignant neoplasm of navicular bone of foot (disorder),y,descendant of concept mapped from leaf +707486007,Primary basaloid carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +188498009,Lymphosarcoma (disorder),y,descendant of concept mapped from leaf +93766000,"Primary malignant neoplasm of cornea, primary (disorder)",y,descendant of concept mapped from leaf +763719001,Hydroa vacciniforme-like lymphoma (disorder),y,descendant of concept mapped from leaf +307610008,Pilomatrix carcinoma of skin (disorder),y,descendant of concept mapped from leaf +403906006,Metastatic squamous cell carcinoma (disorder),y,descendant of concept mapped from leaf +93671004,Primary malignant neoplasm of anterior mediastinum (disorder),y,descendant of concept mapped from leaf +707348004,Primary carcinoma of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +236512004,Leukemic infiltrate of kidney (disorder),y,descendant of concept mapped from leaf +94220000,Secondary malignant neoplasm of bone of skull (disorder),y,descendant of concept mapped from leaf +145831000119103,Primary malignant germ cell neoplasm (disorder),y,descendant of concept mapped from leaf +737309000,Primary adenocarcinoma of submandibular gland (disorder),y,descendant of concept mapped from leaf +707579001,Primary basaloid squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94604000,Secondary malignant neoplasm of splenic flexure of colon (disorder),y,descendant of concept mapped from leaf +94431005,Secondary malignant neoplasm of muscle of upper limb (disorder),y,descendant of concept mapped from leaf +447805007,Lymphoma of greater curvature of stomach (disorder),y,descendant of concept mapped from leaf +71111000119109,Recurrent primary malignant neoplasm of vulva (disorder),y,descendant of concept mapped from leaf +721602000,Primary embryonal carcinoma of testis (disorder),y,descendant of concept mapped from leaf +765136002,Primary cutaneous CD8 positive aggressive epidermotropic cytotoxic T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +91031000119108,Primary chondrosarcoma of bone of upper limb (disorder),y,descendant of concept mapped from leaf +369556008,Malignant tumor involving right fallopian tube by separate metastasis from uterine cervix (disorder),y,descendant of concept mapped from leaf +93674007,Primary malignant neoplasm of anterior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +707660007,Primary giant cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +92511007,Burkitt's tumor of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +402504008,Basal cell carcinoma of nasolabial groove (disorder),y,descendant of concept mapped from leaf +703429003,Malignant optic glioma of adulthood (disorder),y,descendant of concept mapped from leaf +94583000,Secondary malignant neoplasm of soft tissues of axilla (disorder),y,descendant of concept mapped from leaf +422968005,"Non-small cell carcinoma of lung, TNM stage 3 (disorder)",y,descendant of concept mapped from leaf +94271003,Secondary malignant neoplasm of descending colon (disorder),y,descendant of concept mapped from leaf +369457001,Malignant tumor involving rectum by separate metastasis from ovary (disorder),y,descendant of concept mapped from leaf +413656006,Blastic phase chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +277543005,Malignant white blood cell disorder (disorder),y,descendant of concept mapped from leaf +94394000,Secondary malignant neoplasm of lymph nodes of head (disorder),y,descendant of concept mapped from leaf +94380001,Secondary malignant neoplasm of lip (disorder),y,descendant of concept mapped from leaf +91151000119103,Primary squamous cell carcinoma of chest wall (disorder),y,descendant of concept mapped from leaf +449223003,Malignant neoplasm of alveolus of maxilla (disorder),y,descendant of concept mapped from leaf +254938000,Astrocytoma of brain (disorder),y,descendant of concept mapped from leaf +307340003,Monosomy 7 syndrome (disorder),y,descendant of concept mapped from leaf +733913003,Primary intraosseous squamous cell carcinoma derived from keratocystic odontogenic neoplasm (morphologic abnormality),y,descendant of concept mapped from leaf +254732008,Acral lentiginous malignant melanoma of skin (disorder),y,descendant of concept mapped from leaf +724552002,Primary poorly differentiated carcinoma of thyroid gland (disorder),y,descendant of concept mapped from leaf +93708002,Primary malignant neoplasm of blood vessel of shoulder (disorder),y,descendant of concept mapped from leaf +109821008,Overlapping malignant neoplasm of gastrointestinal tract (disorder),y,descendant of concept mapped from leaf +285308002,Squamous cell carcinoma of skin of lower lip (disorder),y,descendant of concept mapped from leaf +681621000119105,Primary adenocarcinoma of body of pancreas (disorder),y,descendant of concept mapped from leaf +93738008,Primary malignant neoplasm of cardia of stomach (disorder),y,descendant of concept mapped from leaf +188587006,"Hodgkin's disease, lymphocytic depletion of intra-abdominal lymph nodes (disorder)",y,descendant of concept mapped from leaf +94471000,Secondary malignant neoplasm of parietal lobe (disorder),y,descendant of concept mapped from leaf +764938007,Lymphoepithelial carcinoma (disorder),y,descendant of concept mapped from leaf +734086009,Oligodendroglioma with isocitrate dehydrogenase mutant and 1p/19q-codeleted (morphologic abnormality),y,descendant of concept mapped from leaf +447658000,Lymphoma of fundus of stomach (disorder),y,descendant of concept mapped from leaf +307624007,Diffuse malignant lymphoma - centroblastic-centrocytic (disorder),y,descendant of concept mapped from leaf +94547009,Secondary malignant neoplasm of skin of chest (disorder),y,descendant of concept mapped from leaf +396892009,Mixed ductal-endocrine carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +94510009,Secondary malignant neoplasm of rectouterine pouch (disorder),y,descendant of concept mapped from leaf +764951002,Carcinosarcoma of cervix uteri (disorder),y,descendant of concept mapped from leaf +707538002,Primary squamous cell carcinoma of vallecula (disorder),y,descendant of concept mapped from leaf +722827008,Primary synovial sarcoma of respiratory organ (disorder),y,descendant of concept mapped from leaf +93953009,Primary malignant neoplasm of pelvis (disorder),y,descendant of concept mapped from leaf +93488004,"Hodgkin's disease, lymphocytic depletion of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +447416008,Primary malignant neoplasm of distal bile duct (disorder),y,descendant of concept mapped from leaf +707386008,Primary acinar cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +354681000119109,Primary malignant neoplasm of bone of right lower limb (disorder),y,descendant of concept mapped from leaf +93933005,Primary malignant neoplasm of oropharynx (disorder),y,descendant of concept mapped from leaf +188548006,Hodgkin's sarcoma of lymph nodes of inguinal region and lower limb (disorder),y,descendant of concept mapped from leaf +448217003,Follicular non-Hodgkin's lymphoma of prostate (disorder),y,descendant of concept mapped from leaf +93713003,Primary malignant neoplasm of blood vessel of upper limb (disorder),y,descendant of concept mapped from leaf +94033003,Primary malignant neoplasm of skin of lower limb (disorder),y,descendant of concept mapped from leaf +109976000,Lymphoepithelioid lymphoma (disorder),y,descendant of concept mapped from leaf +94567000,Secondary malignant neoplasm of skin of nose (disorder),y,descendant of concept mapped from leaf +707457009,Primary spindle cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +707401000,Primary clear cell adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +723850009,Primary osteosarcoma of bone of limb (disorder),y,descendant of concept mapped from leaf +707489000,Primary spindle cell squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +426336007,Solitary osseous myeloma (disorder),y,descendant of concept mapped from leaf +372096000,Carcinoma of male breast (disorder),y,descendant of concept mapped from leaf +133751000119102,Lymphoma of colon (disorder),y,descendant of concept mapped from leaf +444712000,Mucinous carcinoma of breast (disorder),y,descendant of concept mapped from leaf +93692004,Primary malignant neoplasm of blood vessel of axilla (disorder),y,descendant of concept mapped from leaf +277642008,Low grade T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +369552005,Malignant tumor involving right fallopian tube by direct extension from vagina (disorder),y,descendant of concept mapped from leaf +1090241000000107,Angioimmunoblastic T-cell lymphoma with dysproteinaemia (disorder),y,descendant of concept mapped from leaf +93658002,Primary malignant neoplasm of accessory nerve (disorder),y,descendant of concept mapped from leaf +443250000,Malignant fibromatous neoplasm (disorder),y,descendant of concept mapped from leaf +12301000132103,Acute lymphoid leukemia relapse (disorder),y,descendant of concept mapped from leaf +93716006,Primary malignant neoplasm of body of penis (disorder),y,descendant of concept mapped from leaf +93734005,Primary malignant neoplasm of bronchus (disorder),y,descendant of concept mapped from leaf +242951000119108,Primary squamous cell carcinoma of vermilion border of lip (disorder),y,descendant of concept mapped from leaf +94366008,Secondary malignant neoplasm of laryngeal aspect of aryepiglottic fold (disorder),y,descendant of concept mapped from leaf +716788007,Epstein-Barr virus positive diffuse large B-cell lymphoma of elderly (disorder),y,descendant of concept mapped from leaf +423280002,Malignant melanoma of skin of canthus of eye (disorder),y,descendant of concept mapped from leaf +734068006,Embryonal central nervous system neoplasm with rhabdoid feature (morphologic abnormality),y,descendant of concept mapped from leaf +402543007,Basal cell carcinoma recurrent following radiotherapy (disorder),y,descendant of concept mapped from leaf +31047003,Lymphomatoid papulosis (disorder),y,descendant of concept mapped from leaf +189815007,Pulmonary blastoma (disorder),y,descendant of concept mapped from leaf +254635004,Epithelioid hemangioendothelioma of lung (disorder),y,descendant of concept mapped from leaf +93493001,"Hodgkin's disease, lymphocytic-histiocytic predominance of intra-abdominal lymph nodes (disorder)",y,descendant of concept mapped from leaf +724806004,Primary malignant neuroepitheliomatous neoplasm of autonomic nervous system (disorder),y,descendant of concept mapped from leaf +109943004,Primary malignant neoplasm of peripheral nerves of abdomen (disorder),y,descendant of concept mapped from leaf +95230004,Reticulosarcoma of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +93637008,Malignant melanoma of skin of hip (disorder),y,descendant of concept mapped from leaf +449417005,Malignant epithelial neoplasm of nasal septum (disorder),y,descendant of concept mapped from leaf +254871000,Immature teratoma of ovary (disorder),y,descendant of concept mapped from leaf +94060005,Primary malignant neoplasm of soft tissues of perineum (disorder),y,descendant of concept mapped from leaf +94488007,Secondary malignant neoplasm of pharynx (disorder),y,descendant of concept mapped from leaf +94025004,Primary malignant neoplasm of skin of forearm (disorder),y,descendant of concept mapped from leaf +94299007,Secondary malignant neoplasm of femoral lymph nodes (disorder),y,descendant of concept mapped from leaf +369590004,Malignant tumor involving vulva by separate metastasis from ovary (disorder),y,descendant of concept mapped from leaf +425376008,"Squamous cell carcinoma of lung, TNM stage 4 (disorder)",y,descendant of concept mapped from leaf +94690004,"Mixed cell type lymphosarcoma of lymph nodes of head, face, and neck (disorder)",y,descendant of concept mapped from leaf +277461004,Anaplastic astrocytoma of brain (disorder),y,descendant of concept mapped from leaf +413842007,Chronic myeloid leukemia in lymphoid blast crisis (disorder),y,descendant of concept mapped from leaf +722665003,Primary malignant melanoma of cornea (disorder),y,descendant of concept mapped from leaf +94441008,Secondary malignant neoplasm of neck (disorder),y,descendant of concept mapped from leaf +385478001,Adenoma malignum (disorder),y,descendant of concept mapped from leaf +735917000,Primary malignant neoplasm of ocular adnexa (disorder),y,descendant of concept mapped from leaf +93139005,Letterer-Siwe disease of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +707392002,Primary giant cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +93812000,Primary malignant neoplasm of gingival mucosa (disorder),y,descendant of concept mapped from leaf +722687007,Primary mucinous carcinoma of uterine adnexa (disorder),y,descendant of concept mapped from leaf +402513005,Basal cell carcinoma of tragus (disorder),y,descendant of concept mapped from leaf +188582000,"Hodgkin's disease, mixed cellularity of lymph nodes of multiple sites (disorder)",y,descendant of concept mapped from leaf +372003004,Primary malignant neoplasm of pancreas (disorder),y,descendant of concept mapped from leaf +369595009,Malignant tumor involving an organ by direct extension from endometrium (disorder),y,descendant of concept mapped from leaf +94469000,Secondary malignant neoplasm of paravaginal lymph nodes (disorder),y,descendant of concept mapped from leaf +448465000,Diffuse non-Hodgkin's lymphoma of testis (disorder),y,descendant of concept mapped from leaf +713516007,Primary effusion lymphoma (disorder),y,descendant of concept mapped from leaf +94289002,Secondary malignant neoplasm of eustachian tube (disorder),y,descendant of concept mapped from leaf +93977003,Primary malignant neoplasm of pylorus (disorder),y,descendant of concept mapped from leaf +93923002,Primary malignant neoplasm of nervous system (disorder),y,descendant of concept mapped from leaf +423106003,Adenocarcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +723077004,Primary myosarcoma of uterus (disorder),y,descendant of concept mapped from leaf +1091861000000100,"Follicular lymphoma, cutaneous follicle centre (disorder)",y,descendant of concept mapped from leaf +404052009,Botryoid rhabdomyosarcoma (disorder),y,descendant of concept mapped from leaf +369564002,Malignant tumor involving left ovary by separate metastasis from vagina (disorder),y,descendant of concept mapped from leaf +277602003,Acute megakaryoblastic leukemia (disorder),y,descendant of concept mapped from leaf +188089003,Malignant neoplasm of skin of ear and external auditory canal (disorder),y,descendant of concept mapped from leaf +94478006,Secondary malignant neoplasm of pelvic bone (disorder),y,descendant of concept mapped from leaf +94451009,Secondary malignant neoplasm of olfactory nerve (disorder),y,descendant of concept mapped from leaf +109966003,"Diffuse non-Hodgkin's lymphoma, immunoblastic (disorder)",y,descendant of concept mapped from leaf +93818001,Primary malignant neoplasm of greater curvature of stomach (disorder),y,descendant of concept mapped from leaf +724644005,Myeloid leukemia co-occurrent with Down syndrome (disorder),y,descendant of concept mapped from leaf +404038007,Epithelioid malignant nerve sheath tumor (disorder),y,descendant of concept mapped from leaf +254714008,Mucinous eccrine carcinoma of skin (disorder),y,descendant of concept mapped from leaf +721541009,Primary malignant sarcoma of skin (disorder),y,descendant of concept mapped from leaf +882791000000109,Malignant neoplasm of foot and ankle (disorder),y,descendant of concept mapped from leaf +425225007,Malignant mixed tumor of salivary gland (disorder),y,descendant of concept mapped from leaf +254701007,Basal cell carcinoma of skin (disorder),y,descendant of concept mapped from leaf +707482009,Primary papillary squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +93893006,Primary malignant neoplasm of metatarsal bone (disorder),y,descendant of concept mapped from leaf +95188007,Nodular lymphoma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +94007006,Primary malignant neoplasm of skin of abdomen (disorder),y,descendant of concept mapped from leaf +95186006,Nodular lymphoma of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +94235004,Secondary malignant neoplasm of cecum (disorder),y,descendant of concept mapped from leaf +719052006,Recurrent squamous cell carcinoma (disorder),y,descendant of concept mapped from leaf +425127006,Carcinoma ex pleomorphic adenoma of parotid gland (disorder),y,descendant of concept mapped from leaf +95263006,Sézary's disease of spleen (disorder),y,descendant of concept mapped from leaf +707360003,Primary lymphoepithelial carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +734134003,Cerebellar liponeurocytoma (morphologic abnormality),y,descendant of concept mapped from leaf +94601008,Secondary malignant neoplasm of spinal meninges (disorder),y,descendant of concept mapped from leaf +53801007,Ganglioneuroma (morphologic abnormality),y,descendant of concept mapped from leaf +424151006,Anaplastic glioma of brain (disorder),y,descendant of concept mapped from leaf +94177007,Secondary malignant neoplasm of areola of male breast (disorder),y,descendant of concept mapped from leaf +93901001,Primary malignant neoplasm of muscle of face (disorder),y,descendant of concept mapped from leaf +703700004,"Chondrosarcoma, grade 3 (morphologic abnormality)",y,descendant of concept mapped from leaf +238637007,Acanthosis palmaris (disorder),y,descendant of concept mapped from leaf +93928006,Primary malignant neoplasm of occipital lobe (disorder),y,descendant of concept mapped from leaf +94688000,Mixed cell type lymphosarcoma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +404072004,Dedifferentiated liposarcoma (disorder),y,descendant of concept mapped from leaf +721577002,Primary liposarcoma of soft tissue of limb (disorder),y,descendant of concept mapped from leaf +1080941000119109,Malignant melanoma of left choroid (disorder),y,descendant of concept mapped from leaf +254708001,Eccrine porocarcinoma of skin (disorder),y,descendant of concept mapped from leaf +91081000119109,Primary chondrosarcoma of bone of lower limb (disorder),y,descendant of concept mapped from leaf +94405008,Secondary malignant neoplasm of maxilla (disorder),y,descendant of concept mapped from leaf +732201008,Carcinosarcoma of endometrium (disorder),y,descendant of concept mapped from leaf +188729005,Adult T-cell leukemia (disorder),y,descendant of concept mapped from leaf +94404007,Secondary malignant neoplasm of mastoid air cells (disorder),y,descendant of concept mapped from leaf +93720005,Primary malignant neoplasm of bone marrow (disorder),y,descendant of concept mapped from leaf +423708008,Mucoepidermoid carcinoma of salivary gland (disorder),y,descendant of concept mapped from leaf +254797000,Malignant hemangiopericytoma of skin (disorder),y,descendant of concept mapped from leaf +703699000,"Chondrosarcoma, grade 2 (morphologic abnormality)",y,descendant of concept mapped from leaf +707595001,Primary mucinous cystadenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +94530008,Secondary malignant neoplasm of sclera (disorder),y,descendant of concept mapped from leaf +426124006,"Acute myeloid leukemia with maturation, FAB M2, in remission (disorder)",y,descendant of concept mapped from leaf +430338009,Smoldering chronic lymphocytic leukemia (disorder),y,descendant of concept mapped from leaf +402510008,Basal cell carcinoma of helix of ear (disorder),y,descendant of concept mapped from leaf +94678001,Secondary malignant neoplasm of visceral pleura (disorder),y,descendant of concept mapped from leaf +94276008,Secondary malignant neoplasm of ectopic female breast tissue (disorder),y,descendant of concept mapped from leaf +93832004,Primary malignant neoplasm of ileum (disorder),y,descendant of concept mapped from leaf +707404008,Primary mixed subtype adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +443333004,Medulloblastoma (disorder),y,descendant of concept mapped from leaf +94051002,Primary malignant neoplasm of soft tissues of axilla (disorder),y,descendant of concept mapped from leaf +371980003,Primary malignant neoplasm of clitoris (disorder),y,descendant of concept mapped from leaf +448447004,Non-Hodgkin's lymphoma of skin (disorder),y,descendant of concept mapped from leaf +734093008,Embryonal neoplasm with multilayered rosettes (morphologic abnormality),y,descendant of concept mapped from leaf +447706001,Leiomyosarcoma of scalp (disorder),y,descendant of concept mapped from leaf +725390002,Acute myeloid leukemia with t(8;16)(p11;p13) translocation (disorder),y,descendant of concept mapped from leaf +721695008,Primary adenocarcinoma of ascending colon and right flexure (disorder),y,descendant of concept mapped from leaf +94198007,Secondary malignant neoplasm of blood vessel of inguinal region (disorder),y,descendant of concept mapped from leaf +303056000,"Malignant lymphoma, follicular center cell, cleaved (disorder)",y,descendant of concept mapped from leaf +721556000,Primary adenocarcinoma of palate (disorder),y,descendant of concept mapped from leaf +371998004,Primary malignant neoplasm of lower third of esophagus (disorder),y,descendant of concept mapped from leaf +448231003,Follicular non-Hodgkin's lymphoma of nose (disorder),y,descendant of concept mapped from leaf +709190005,Metastatic leiomyosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +94317006,Secondary malignant neoplasm of glossopharyngeal nerve (disorder),y,descendant of concept mapped from leaf +372139008,Primary malignant neoplasm of gallbladder (disorder),y,descendant of concept mapped from leaf +94144008,Primary malignant neoplasm of Waldeyer's ring (disorder),y,descendant of concept mapped from leaf +765095002,Renal medullary carcinoma (disorder),y,descendant of concept mapped from leaf +94581003,Secondary malignant neoplasm of soft palate (disorder),y,descendant of concept mapped from leaf +94110001,Primary malignant neoplasm of trochlear nerve (disorder),y,descendant of concept mapped from leaf +254800003,Epithelioid cell sarcoma of skin (disorder),y,descendant of concept mapped from leaf +94331006,Secondary malignant neoplasm of hypoglossal nerve (disorder),y,descendant of concept mapped from leaf +94273000,Secondary malignant neoplasm of dorsal surface of tongue (disorder),y,descendant of concept mapped from leaf +255096006,Malignant tumor of dermis (disorder),y,descendant of concept mapped from leaf +721302006,Refractory anemia with ringed sideroblasts associated with marked thrombocytosis (disorder),y,descendant of concept mapped from leaf +722670005,Primary thymic carcinoma (disorder),y,descendant of concept mapped from leaf +188637007,Sézary's disease of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +708971008,Diffuse sclerosing papillary thyroid carcinoma (disorder),y,descendant of concept mapped from leaf +404123008,Leukemic infiltration of skin (T-cell prolymphocytic leukemia) (disorder),y,descendant of concept mapped from leaf +372012002,Primary malignant neoplasm of soft tissues of upper limb (disorder),y,descendant of concept mapped from leaf +94306005,Secondary malignant neoplasm of forearm (disorder),y,descendant of concept mapped from leaf +707494000,Primary verrucous carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +109356001,Primary malignant neoplasm of unspecified site (disorder),y,descendant of concept mapped from leaf +724059003,Malignant neoplasm of lower lobe of left lung (disorder),y,descendant of concept mapped from leaf +188664008,Mast cell malignancy of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +733135005,Primary urothelial carcinoma of paraurethral gland (disorder),y,descendant of concept mapped from leaf +93536009,Hodgkin's granuloma of spleen (disorder),y,descendant of concept mapped from leaf +399634005,"Choroidal melanoma, diffuse (morphologic abnormality)",y,descendant of concept mapped from leaf +94364006,Secondary malignant neoplasm of lacrimal gland (disorder),y,descendant of concept mapped from leaf +707424007,Primary adenosquamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +369484000,Malignant tumor involving vasa deferentia by separate metastasis from prostate (disorder),y,descendant of concept mapped from leaf +424952003,Sarcoma of soft tissue (disorder),y,descendant of concept mapped from leaf +721623006,Primary adenocarcinoma of middle third of esophagus (disorder),y,descendant of concept mapped from leaf +707421004,Primary undifferentiated carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +722524005,Primary invasive pleomorphic lobular carcinoma of breast (disorder),y,descendant of concept mapped from leaf +449222008,Follicular non-Hodgkin's lymphoma of stomach (disorder),y,descendant of concept mapped from leaf +443936004,Oligodendroglioma (disorder),y,descendant of concept mapped from leaf +93946000,Primary malignant neoplasm of parietal lobe (disorder),y,descendant of concept mapped from leaf +359987004,Krukenberg tumor (disorder),y,descendant of concept mapped from leaf +442537007,Non-Hodgkin lymphoma associated with Human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +94437009,Secondary malignant neoplasm of nasal concha (disorder),y,descendant of concept mapped from leaf +94262007,Secondary malignant neoplasm of common bile duct (disorder),y,descendant of concept mapped from leaf +92812005,"Chronic leukemia, disease (disorder)",y,descendant of concept mapped from leaf +699318007,Supratentorial primitive neuroectodermal tumor (disorder),y,descendant of concept mapped from leaf +184741000119107,Primary adenocarcinoma of anus (disorder),y,descendant of concept mapped from leaf +94295001,Secondary malignant neoplasm of fallopian tube (disorder),y,descendant of concept mapped from leaf +188110009,Malignant neoplasm of skin of abdominal wall (disorder),y,descendant of concept mapped from leaf +413587002,Smoldering myeloma (disorder),y,descendant of concept mapped from leaf +404150003,Mantle cell B-cell lymphoma (nodal/systemic with skin involvement) (disorder),y,descendant of concept mapped from leaf +94242004,Secondary malignant neoplasm of cauda equina (disorder),y,descendant of concept mapped from leaf +403909004,Pigmented basal cell carcinoma (disorder),y,descendant of concept mapped from leaf +94211009,Secondary malignant neoplasm of blood vessel (disorder),y,descendant of concept mapped from leaf +722512003,Primary rhabdomyosarcoma of intrathoracic organ (disorder),y,descendant of concept mapped from leaf +94378007,Secondary malignant neoplasm of lesser curvature of stomach (disorder),y,descendant of concept mapped from leaf +698200003,Large cell Ewing sarcoma of bone (disorder),y,descendant of concept mapped from leaf +94018006,Primary malignant neoplasm of skin of elbow (disorder),y,descendant of concept mapped from leaf +93731002,Primary malignant neoplasm of bronchus of right lower lobe (disorder),y,descendant of concept mapped from leaf +404144008,Primary cutaneous diffuse large cell B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +721576006,Primary angiosarcoma of breast (disorder),y,descendant of concept mapped from leaf +94057003,Primary malignant neoplasm of soft tissues of lower limb (disorder),y,descendant of concept mapped from leaf +233940007,Pulmonary tumor embolism (disorder),y,descendant of concept mapped from leaf +721306009,Therapy related acute myeloid leukemia and myelodysplastic syndrome (disorder),y,descendant of concept mapped from leaf +697993003,Undifferentiated carcinoma of nasal sinus (disorder),y,descendant of concept mapped from leaf +109839004,"Overlapping malignant neoplasm of rectum, anus and anal canal (disorder)",y,descendant of concept mapped from leaf +89880005,"Ganglioglioma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,descendant of concept mapped from leaf +188107002,Malignant neoplasm of skin of axillary fold (disorder),y,descendant of concept mapped from leaf +404041003,Malignant granular cell tumor (disorder),y,descendant of concept mapped from leaf +404093001,Sarcomatous metastasis in skin (disorder),y,descendant of concept mapped from leaf +707456000,Primary undifferentiated carcinoma of lung (disorder),y,descendant of concept mapped from leaf +94355001,Secondary malignant neoplasm of isthmus of uterus (disorder),y,descendant of concept mapped from leaf +448882009,Malignant neoplasm of intraabdominal organ (disorder),y,descendant of concept mapped from leaf +107591000119100,Primary squamous cell carcinoma of urethra (disorder),y,descendant of concept mapped from leaf +399660006,Ring melanoma of ciliary body (disorder),y,descendant of concept mapped from leaf +94362005,Secondary malignant neoplasm of labia minora (disorder),y,descendant of concept mapped from leaf +109931000,Primary malignant neoplasm of peripheral nerves of upper limb (disorder),y,descendant of concept mapped from leaf +93825008,Primary malignant neoplasm of heart (disorder),y,descendant of concept mapped from leaf +93711001,Primary malignant neoplasm of blood vessel of toe (disorder),y,descendant of concept mapped from leaf +188489006,"Reticulosarcoma of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +94282006,Secondary malignant neoplasm of epicardium (disorder),y,descendant of concept mapped from leaf +424276002,Malignant glioma of brainstem (disorder),y,descendant of concept mapped from leaf +188534006,"Hodgkin's granuloma of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +707582006,Primary spindle cell squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94290006,Secondary malignant neoplasm of exocervix (disorder),y,descendant of concept mapped from leaf +422238009,"Papillary carcinoma, cribriform-morular (morphologic abnormality)",y,descendant of concept mapped from leaf +735450006,Primary malignant neuroepitheliomatous neoplasm of nasal cavity (disorder),y,descendant of concept mapped from leaf +94487002,Secondary malignant neoplasm of phalanx of hand (disorder),y,descendant of concept mapped from leaf +94374009,Secondary malignant neoplasm of lateral wall of urinary bladder (disorder),y,descendant of concept mapped from leaf +94484009,Secondary malignant neoplasm of pericardium (disorder),y,descendant of concept mapped from leaf +94093001,Primary malignant neoplasm of thigh (disorder),y,descendant of concept mapped from leaf +707385007,Primary undifferentiated carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +188487008,Lymphosarcoma and reticulosarcoma (disorder),y,descendant of concept mapped from leaf +722516000,Primary liposarcoma of peritoneum (disorder),y,descendant of concept mapped from leaf +726721002,Nodal marginal zone B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +94015009,Primary malignant neoplasm of skin of chest (disorder),y,descendant of concept mapped from leaf +372135002,"Primary malignant neoplasm of upper lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +722103009,Hormone sensitive prostate cancer (disorder),y,descendant of concept mapped from leaf +703230006,Non-small cell lung cancer without mutation in epidermal growth factor receptor (disorder),y,descendant of concept mapped from leaf +94618007,Secondary malignant neoplasm of tail of pancreas (disorder),y,descendant of concept mapped from leaf +94270002,Secondary malignant neoplasm of cystic duct (disorder),y,descendant of concept mapped from leaf +93862005,Primary malignant neoplasm of lateral wall of oropharynx (disorder),y,descendant of concept mapped from leaf +93963001,Primary malignant neoplasm of pisiform bone of hand (disorder),y,descendant of concept mapped from leaf +275265005,Epithelioma basal cell (disorder),y,descendant of concept mapped from leaf +403901001,Acantholytic squamous cell carcinoma (disorder),y,descendant of concept mapped from leaf +1079131000119103,Primary basal cell carcinoma of left lower limb (disorder),y,descendant of concept mapped from leaf +707627009,Primary salivary gland type carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +188745007,Chronic monocytic leukemia (disorder),y,descendant of concept mapped from leaf +707394001,Primary spindle cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +404139001,Leukemic infiltration of skin in hairy-cell leukemia (disorder),y,descendant of concept mapped from leaf +359631009,"Acute myeloid leukemia, minimal differentiation, FAB M0 (disorder)",y,descendant of concept mapped from leaf +449294002,Sarcoma of scapula (disorder),y,descendant of concept mapped from leaf +721628002,Primary adenocarcinoma of esophagogastric junction (disorder),y,descendant of concept mapped from leaf +712849003,Primary malignant neoplasm of prostate metastatic to bone (disorder),y,descendant of concept mapped from leaf +425303004,Squamous cell carcinomatosis (disorder),y,descendant of concept mapped from leaf +713290004,Malignant ameloblastoma of mandible (disorder),y,descendant of concept mapped from leaf +94321004,Secondary malignant neoplasm of gum (disorder),y,descendant of concept mapped from leaf +94190000,Secondary malignant neoplasm of blood vessel of buttock (disorder),y,descendant of concept mapped from leaf +94592002,Secondary malignant neoplasm of soft tissues of perineum (disorder),y,descendant of concept mapped from leaf +721626003,Primary malignant neuroendocrine neoplasm of esophagus (disorder),y,descendant of concept mapped from leaf +188119005,Malignant neoplasm of skin of upper limb and shoulder (disorder),y,descendant of concept mapped from leaf +277473004,B-cell chronic lymphocytic leukemia (disorder),y,descendant of concept mapped from leaf +93188005,Malignant histiocytosis of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +94548004,Secondary malignant neoplasm of skin of chin (disorder),y,descendant of concept mapped from leaf +110007008,Adult T-cell leukemia/lymphoma (disorder),y,descendant of concept mapped from leaf +105111000119109,Primary squamous cell carcinoma of thymus (disorder),y,descendant of concept mapped from leaf +307609003,Adamantinoma of long bone (disorder),y,descendant of concept mapped from leaf +702368000,Carcinosarcoma of ovary (disorder),y,descendant of concept mapped from leaf +402503002,Basal cell carcinoma of nasal columella (disorder),y,descendant of concept mapped from leaf +94020009,Primary malignant neoplasm of skin of eyebrow (disorder),y,descendant of concept mapped from leaf +415287001,Relapsing chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +369513003,Primary malignant neoplasm of left fallopian tube (disorder),y,descendant of concept mapped from leaf +402563000,Metastatic malignant melanoma with diffuse hypermelanosis (disorder),y,descendant of concept mapped from leaf +123631000119103,Malignant poorly differentiated neuroendocrine carcinoma (disorder),y,descendant of concept mapped from leaf +93821004,Primary malignant neoplasm of hand (disorder),y,descendant of concept mapped from leaf +723182009,Primary squamous cell carcinoma of nasal cavity (disorder),y,descendant of concept mapped from leaf +188090007,Malignant neoplasm of skin of auricle (ear) (disorder),y,descendant of concept mapped from leaf +700423003,Adenocarcinoma of pancreas (disorder),y,descendant of concept mapped from leaf +709517003,Malignant carcinoid tumor of small intestine (disorder),y,descendant of concept mapped from leaf +307603002,Malignant blue nevus of skin (disorder),y,descendant of concept mapped from leaf +708054009,Malignant neoplasm after immunosuppressive therapy (disorder),y,descendant of concept mapped from leaf +718220008,Hereditary breast and ovarian cancer syndrome (disorder),y,descendant of concept mapped from leaf +449268006,Sarcoma of clavicle (disorder),y,descendant of concept mapped from leaf +93879004,Primary malignant neoplasm of lunate bone (disorder),y,descendant of concept mapped from leaf +94104001,Primary malignant neoplasm of trachea (disorder),y,descendant of concept mapped from leaf +277601005,Acute monoblastic leukemia (disorder),y,descendant of concept mapped from leaf +15956341000119105,Adenocarcinoma of left lung (disorder),y,descendant of concept mapped from leaf +188667001,Mast cell malignancy of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +402521004,Basal cell carcinoma of upper extremity (disorder),y,descendant of concept mapped from leaf +404092006,Carcinomatous metastasis in skin (disorder),y,descendant of concept mapped from leaf +12622007,Clear cell sarcoma (except of Kidney M-89643) (morphologic abnormality),y,descendant of concept mapped from leaf +703387000,Acute myeloid leukemia with normal karyotype (disorder),y,descendant of concept mapped from leaf +93183001,Malignant histiocytosis of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +402523001,Basal cell carcinoma of truncal skin (disorder),y,descendant of concept mapped from leaf +118614007,"Langerhans cell histiocytosis, disseminated (disorder)",y,descendant of concept mapped from leaf +134312002,Odontogenic ghost cell carcinoma (disorder),y,descendant of concept mapped from leaf +404148006,Diffuse large B-cell lymphoma (nodal/systemic with skin involvement) (disorder),y,descendant of concept mapped from leaf +369525000,Malignant tumor involving left ovary by direct extension from fallopian tube (disorder),y,descendant of concept mapped from leaf +128770002,Central osteosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +94516003,Secondary malignant neoplasm of retina (disorder),y,descendant of concept mapped from leaf +369604009,Malignant tumor involving an organ by separate metastasis from fallopian tube (disorder),y,descendant of concept mapped from leaf +448257000,Sarcoma of male breast (disorder),y,descendant of concept mapped from leaf +389216001,Diaphyseal medullary stenosis with bone malignancy (disorder),y,descendant of concept mapped from leaf +94316002,Secondary malignant neoplasm of glomus jugulare (disorder),y,descendant of concept mapped from leaf +707388009,Primary squamous cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +254633006,Oat cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +404015009,Superficial malignant fibrous histiocytoma of skin (disorder),y,descendant of concept mapped from leaf +94595000,Secondary malignant neoplasm of soft tissues of trunk (disorder),y,descendant of concept mapped from leaf +241861008,Metastatic malignant neoplasm to nasopharynx (disorder),y,descendant of concept mapped from leaf +448274000,Malignant neoplasm of connective tissue (disorder),y,descendant of concept mapped from leaf +208041000119100,Primary adenocarcinoma of endocervix (disorder),y,descendant of concept mapped from leaf +448709005,Non-Hodgkin's lymphoma of stomach (disorder),y,descendant of concept mapped from leaf +733347006,Primary mucinous cystic neoplasm with associated invasive carcinoma of cystic duct (disorder),y,descendant of concept mapped from leaf +188725004,Lymphoid leukemia (disorder),y,descendant of concept mapped from leaf +448317000,Follicular non-Hodgkin's lymphoma of soft tissue (disorder),y,descendant of concept mapped from leaf +716179006,Extraventricular neurocytoma (morphologic abnormality),y,descendant of concept mapped from leaf +94294002,Secondary malignant neoplasm of facial nerve (disorder),y,descendant of concept mapped from leaf +184881000119106,Primary adenocarcinoma of rectosigmoid junction (disorder),y,descendant of concept mapped from leaf +723173003,Carcinosarcoma of uterine adnexa (disorder),y,descendant of concept mapped from leaf +403912001,Cystic basal cell carcinoma (disorder),y,descendant of concept mapped from leaf +1079171000119100,Primary basal cell carcinoma of right eyelid (disorder),y,descendant of concept mapped from leaf +93903003,Primary malignant neoplasm of muscle of hip (disorder),y,descendant of concept mapped from leaf +707350007,Malignant melanoma of accessory sinus (disorder),y,descendant of concept mapped from leaf +371984007,Primary malignant neoplasm of esophagus (disorder),y,descendant of concept mapped from leaf +93555009,Hodgkin's sarcoma of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +404140004,Primary cutaneous marginal zone B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +93834003,Primary malignant neoplasm of inguinal region (disorder),y,descendant of concept mapped from leaf +93672006,Primary malignant neoplasm of anterior portion of floor of mouth (disorder),y,descendant of concept mapped from leaf +402525008,Basal cell carcinoma - adenoid (disorder),y,descendant of concept mapped from leaf +371974006,Malignant neoplasm of border of tongue (disorder),y,descendant of concept mapped from leaf +109366009,Overlapping malignant neoplasm of accessory sinuses (disorder),y,descendant of concept mapped from leaf +278189009,Hypergranular promyelocytic leukemia (disorder),y,descendant of concept mapped from leaf +353671000119108,Overlapping primary malignant neoplasm of bone and articular cartilage of right upper limb (disorder),y,descendant of concept mapped from leaf +404138009,Small lymphocytic B-cell lymphoma involving skin (disorder),y,descendant of concept mapped from leaf +404153001,Leukemic infiltration of skin in chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +93228004,Malignant melanoma of skin of forearm (disorder),y,descendant of concept mapped from leaf +404172001,Mast cell leukemia affecting skin (disorder),y,descendant of concept mapped from leaf +188635004,Sézary's disease of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +188547001,Hodgkin's sarcoma of lymph nodes of axilla and upper limb (disorder),y,descendant of concept mapped from leaf +1701000119104,Primary adenocarcinoma of colon (disorder),y,descendant of concept mapped from leaf +369454008,Malignant tumor involving rectum by direct extension from vagina (disorder),y,descendant of concept mapped from leaf +93657007,Primary malignant neoplasm of abducens nerve (disorder),y,descendant of concept mapped from leaf +94185003,Secondary malignant neoplasm of biliary tract (disorder),y,descendant of concept mapped from leaf +255071008,Squamous cell carcinoma of lip (disorder),y,descendant of concept mapped from leaf +373090000,Primary malignant neoplasm of breast lower inner quadrant (disorder),y,descendant of concept mapped from leaf +408644002,Adenocarcinoma of duodenum (disorder),y,descendant of concept mapped from leaf +450902001,Papillary glioneuronal tumor (morphologic abnormality),y,descendant of concept mapped from leaf +371968006,Primary malignant neoplasm of anterior two-thirds of tongue (disorder),y,descendant of concept mapped from leaf +128776008,Dedifferentiated chondrosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +443961001,Malignant adenomatous neoplasm (disorder),y,descendant of concept mapped from leaf +402545000,Basal cell carcinoma - second recurrence (disorder),y,descendant of concept mapped from leaf +402530007,Basal cell carcinoma with matrical differentiation (disorder),y,descendant of concept mapped from leaf +402511007,Basal cell carcinoma of conchal bowl of ear (disorder),y,descendant of concept mapped from leaf +94143002,Primary malignant neoplasm of vulva (disorder),y,descendant of concept mapped from leaf +94035005,Primary malignant neoplasm of skin of nose (disorder),y,descendant of concept mapped from leaf +423158009,Hurthle cell carcinoma of thyroid (disorder),y,descendant of concept mapped from leaf +414780005,Mucosa-associated lymphoid tissue lymphoma of orbit (disorder),y,descendant of concept mapped from leaf +422541001,Undifferentiated carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +723076008,Primary myxofibrosarcoma (disorder),y,descendant of concept mapped from leaf +127066000,Familial polycythemia vera (disorder),y,descendant of concept mapped from leaf +721546004,Primary adenocarcinoma of ciliary epithelium (disorder),y,descendant of concept mapped from leaf +448273006,Malignant melanoma of skin of scrotum (disorder),y,descendant of concept mapped from leaf +1651000119109,Primary adenocarcinoma of pancreas (disorder),y,descendant of concept mapped from leaf +721718003,Primary adenocarcinoma of ampulla of Vater (disorder),y,descendant of concept mapped from leaf +94024000,Primary malignant neoplasm of skin of foot (disorder),y,descendant of concept mapped from leaf +82546001,Reactive immunoproliferative disease (disorder),y,descendant of concept mapped from leaf +40312006,Pericarditis co-occurrent and due to tumor metastatic to pericardium (disorder),y,descendant of concept mapped from leaf +371981004,Primary malignant neoplasm of commissure of lip (disorder),y,descendant of concept mapped from leaf +94511008,Secondary malignant neoplasm of rectovaginal septum (disorder),y,descendant of concept mapped from leaf +94124002,Primary malignant neoplasm of urinary bladder neck (disorder),y,descendant of concept mapped from leaf +92581002,Carcinoma in situ of endocrine gland (disorder),y,descendant of concept mapped from leaf +188674006,Diffuse malignant lymphoma - small non-cleaved cell (disorder),y,descendant of concept mapped from leaf +93687001,Primary malignant neoplasm of base of tongue (disorder),y,descendant of concept mapped from leaf +448220006,Non-Hodgkin's lymphoma of bone (disorder),y,descendant of concept mapped from leaf +93835002,Primary malignant neoplasm of inner aspect of lip (disorder),y,descendant of concept mapped from leaf +372015000,Primary malignant neoplasm of the mesentery (disorder),y,descendant of concept mapped from leaf +188103003,Malignant neoplasm of skin of scalp (disorder),y,descendant of concept mapped from leaf +94415002,Secondary malignant neoplasm of minor salivary gland (disorder),y,descendant of concept mapped from leaf +449067008,Malignant neoplasm of parietal pleura (disorder),y,descendant of concept mapped from leaf +372006007,Primary malignant neoplasm of prepuce (disorder),y,descendant of concept mapped from leaf +404157000,Specific skin infiltration in Hodgkin's disease (disorder),y,descendant of concept mapped from leaf +128910001,"Medulloepithelioma, benign (morphologic abnormality)",y,descendant of concept mapped from leaf +94517007,Secondary malignant neoplasm of retrocecal tissue (disorder),y,descendant of concept mapped from leaf +722714004,Primary mucoepidermoid carcinoma of lacrimal apparatus (disorder),y,descendant of concept mapped from leaf +109828002,Primary malignant neoplasm of salivary gland duct (disorder),y,descendant of concept mapped from leaf +94574005,Secondary malignant neoplasm of skin of toe (disorder),y,descendant of concept mapped from leaf +91171000119107,Primary undifferentiated large cell malignant neoplasm of chest wall (disorder),y,descendant of concept mapped from leaf +417417007,Malignant teratoma of undescended testis (disorder),y,descendant of concept mapped from leaf +92508006,Burkitt's tumor of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +93518009,"Hodgkin's disease, nodular sclerosis of spleen (disorder)",y,descendant of concept mapped from leaf +188633006,Sézary's disease of lymph nodes of axilla and upper limb (disorder),y,descendant of concept mapped from leaf +93645003,Malignant melanoma of skin of popliteal area (disorder),y,descendant of concept mapped from leaf +188102008,Malignant neoplasm of scalp AND/OR skin of neck (disorder),y,descendant of concept mapped from leaf +94444000,Secondary malignant neoplasm of nipple of male breast (disorder),y,descendant of concept mapped from leaf +93649009,Malignant melanoma of skin of thigh (disorder),y,descendant of concept mapped from leaf +277597005,Myelodysplastic syndrome with isolated del(5q) (disorder),y,descendant of concept mapped from leaf +94059000,Primary malignant neoplasm of soft tissues of pelvis (disorder),y,descendant of concept mapped from leaf +109947003,Primary malignant neoplasm of peripheral nerves of trunk (disorder),y,descendant of concept mapped from leaf +109886000,Overlapping malignant neoplasm of female breast (disorder),y,descendant of concept mapped from leaf +93152000,Leukemic reticuloendotheliosis of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +109972003,"Follicular non-Hodgkin's lymphoma, large cell (disorder)",y,descendant of concept mapped from leaf +369460008,Malignant tumor involving rectum by separate metastasis from uterus (disorder),y,descendant of concept mapped from leaf +93219000,Malignant melanoma of skin of chin (disorder),y,descendant of concept mapped from leaf +94012007,Primary malignant neoplasm of skin of breast (disorder),y,descendant of concept mapped from leaf +94376006,Secondary malignant neoplasm of left upper lobe of lung (disorder),y,descendant of concept mapped from leaf +190818004,Waldenström macroglobulinemia (disorder),y,descendant of concept mapped from leaf +110000005,Refractory anemia with excess blasts in transformation (disorder),y,descendant of concept mapped from leaf +1082191000119100,Primary squamous cell carcinoma of right ear (disorder),y,descendant of concept mapped from leaf +724805000,Primary malignant neuroepitheliomatous neoplasm of peripheral nerve (disorder),y,descendant of concept mapped from leaf +109941002,Primary malignant neoplasm of peripheral nerves of thorax (disorder),y,descendant of concept mapped from leaf +254709009,Digital papillary eccrine carcinoma of skin (disorder),y,descendant of concept mapped from leaf +448386004,Non-Hodgkin's lymphoma of oral cavity (disorder),y,descendant of concept mapped from leaf +94305009,Secondary malignant neoplasm of foot (disorder),y,descendant of concept mapped from leaf +188726003,Subacute lymphoid leukemia (disorder),y,descendant of concept mapped from leaf +87121000119102,Malignant glioma of cerebellum (disorder),y,descendant of concept mapped from leaf +707408006,Primary small cell non-keratinizing squamous cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +445269007,Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue (disorder),y,descendant of concept mapped from leaf +707342003,Primary adenocarcinoma of ethmoidal sinus (disorder),y,descendant of concept mapped from leaf +314988008,Metastasis from malignant tumor of skin (disorder),y,descendant of concept mapped from leaf +404122003,Leukemic infiltration of skin (chronic T-cell lymphocytic leukemia) (disorder),y,descendant of concept mapped from leaf +404051002,Embryonal rhabdomyosarcoma (disorder),y,descendant of concept mapped from leaf +766981007,Squamous cell carcinoma of colon (disorder),y,descendant of concept mapped from leaf +425230006,"Squamous cell carcinoma of lung, TNM stage 3 (disorder)",y,descendant of concept mapped from leaf +285769009,Acute promyelocytic leukemia - hypogranular variant (disorder),y,descendant of concept mapped from leaf +369488002,Secondary malignant neoplasm of seminal vesicle (disorder),y,descendant of concept mapped from leaf +94121005,Primary malignant neoplasm of ureter (disorder),y,descendant of concept mapped from leaf +109832008,Overlapping malignant neoplasm of oropharynx (disorder),y,descendant of concept mapped from leaf +421980000,"Papillary carcinoma, solid (morphologic abnormality)",y,descendant of concept mapped from leaf +371996000,Primary malignant neoplasm of lip (disorder),y,descendant of concept mapped from leaf +723844004,Primary chondrosarcoma of articular cartilage of limb (disorder),y,descendant of concept mapped from leaf +423349005,Carcinoma of tip of nose (disorder),y,descendant of concept mapped from leaf +707337006,Primary adenocarcinoma of accessory sinus (disorder),y,descendant of concept mapped from leaf +684911000119105,Primary glioblastoma multiforme of frontal lobe (disorder),y,descendant of concept mapped from leaf +717734005,Papillary thyroid carcinoma with renal papillary neoplasia (disorder),y,descendant of concept mapped from leaf +703617004,Low grade fibromyxoid sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +702392008,Metastatic renal cell carcinoma (disorder),y,descendant of concept mapped from leaf +94328005,Secondary malignant neoplasm of hepatic flexure of colon (disorder),y,descendant of concept mapped from leaf +369478003,Malignant tumor involving bladder by separate metastasis from ovary (disorder),y,descendant of concept mapped from leaf +397015000,Systemic mastocytosis with associated clonal hematological non-mast cell lineage disease (disorder),y,descendant of concept mapped from leaf +94637003,Secondary malignant neoplasm of tip and lateral border of tongue (disorder),y,descendant of concept mapped from leaf +448298007,Malignant melanoma of skin of penis (disorder),y,descendant of concept mapped from leaf +94630001,Secondary malignant neoplasm of third cuneiform bone of foot (disorder),y,descendant of concept mapped from leaf +423535002,Basal cell carcinoma of chest wall (disorder),y,descendant of concept mapped from leaf +188511002,Burkitt's lymphoma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +187866005,Malignant neoplasm of middle lobe of lung (disorder),y,descendant of concept mapped from leaf +707353009,Primary squamous cell carcinoma of accessory sinus (disorder),y,descendant of concept mapped from leaf +707361004,Malignant melanoma of frontal sinus (disorder),y,descendant of concept mapped from leaf +92513005,Burkitt's tumor of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +721557009,Primary adenocarcinoma of parotid gland (disorder),y,descendant of concept mapped from leaf +707580003,Primary basaloid carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94710006,Mycosis fungoides of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +733064004,"Osteosarcoma, limb anomalies, erythroid macrocytosis syndrome (disorder)",y,descendant of concept mapped from leaf +369584003,Malignant tumor involving vagina by separate metastasis from ovary (disorder),y,descendant of concept mapped from leaf +422350000,"Follicular carcinoma, grossly encapsulated with angioinvasion (morphologic abnormality)",y,descendant of concept mapped from leaf +94584006,Secondary malignant neoplasm of soft tissues of buttock (disorder),y,descendant of concept mapped from leaf +448376000,Non-Hodgkin's lymphoma of ovary (disorder),y,descendant of concept mapped from leaf +372152003,"Sarcoma, metastatic (morphologic abnormality)",y,descendant of concept mapped from leaf +422282000,Malignant neoplasm associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +109921007,"Primary malignant neoplasm of peripheral nerve of head, face and/or neck (disorder)",y,descendant of concept mapped from leaf +404125001,CD-30 positive anaplastic large T-cell cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +449053004,Lymphoma of lower esophagus (disorder),y,descendant of concept mapped from leaf +313354001,Squamous cell carcinoma of bronchus in left upper lobe (disorder),y,descendant of concept mapped from leaf +94607007,Secondary malignant neoplasm of subglottis (disorder),y,descendant of concept mapped from leaf +369534005,Malignant tumor involving right ovary by direct extension from uterine cervix (disorder),y,descendant of concept mapped from leaf +403941005,Malignant cylindroma of skin (disorder),y,descendant of concept mapped from leaf +448710000,Sarcoma of bone (disorder),y,descendant of concept mapped from leaf +1081561000119108,Recurrent primary malignant neoplasm of right female breast (disorder),y,descendant of concept mapped from leaf +254712007,Microcystic adnexal carcinoma of skin (disorder),y,descendant of concept mapped from leaf +94400003,Secondary malignant neoplasm of major salivary gland (disorder),y,descendant of concept mapped from leaf +761958009,Malignant peripheral nerve sheath neoplasm with perineurial differentiation (disorder),y,descendant of concept mapped from leaf +94385006,Secondary malignant neoplasm of lower inner quadrant of female breast (disorder),y,descendant of concept mapped from leaf +188537004,Hodgkin's granuloma of lymph nodes of axilla and upper limb (disorder),y,descendant of concept mapped from leaf +714251006,Philadelphia chromosome-negative precursor B-cell acute lymphoblastic leukemia (disorder),y,descendant of concept mapped from leaf +94680007,Secondary malignant neoplasm of vomer (disorder),y,descendant of concept mapped from leaf +369572000,Malignant tumor involving right ovary by separate metastasis from uterus (disorder),y,descendant of concept mapped from leaf +763796007,Megakaryoblastic acute myeloid leukemia with t(1;22)(p13;q13) (disorder),y,descendant of concept mapped from leaf +94439007,Secondary malignant neoplasm of navicular bone of foot (disorder),y,descendant of concept mapped from leaf +705061009,Childhood myelodysplastic syndrome (disorder),y,descendant of concept mapped from leaf +369555007,Malignant tumor involving right fallopian tube by separate metastasis from ovary (disorder),y,descendant of concept mapped from leaf +94590005,Secondary malignant neoplasm of soft tissues of neck (disorder),y,descendant of concept mapped from leaf +184781000119102,Primary adenocarcinoma of cervix uteri (disorder),y,descendant of concept mapped from leaf +67841000119103,"Primary small cell malignant neoplasm of lung, TNM stage 4 (disorder)",y,descendant of concept mapped from leaf +188122007,Malignant neoplasm of skin of forearm (disorder),y,descendant of concept mapped from leaf +449292003,Non-Hodgkin's lymphoma of tonsil (disorder),y,descendant of concept mapped from leaf +707673006,Pleuropulmonary blastoma type III (disorder),y,descendant of concept mapped from leaf +285839005,Acute myelomonocytic leukemia - eosinophilic variant (disorder),y,descendant of concept mapped from leaf +93211002,Malignant melanoma of skin of ankle (disorder),y,descendant of concept mapped from leaf +93913006,Primary malignant neoplasm of muscle (disorder),y,descendant of concept mapped from leaf +93910009,Primary malignant neoplasm of muscle of thorax (disorder),y,descendant of concept mapped from leaf +187822008,Fibrosarcoma of spleen (disorder),y,descendant of concept mapped from leaf +231831002,Squamous cell carcinoma of eyelid (disorder),y,descendant of concept mapped from leaf +449034009,Malignant neoplasm of anterior and lateral floor of mouth (disorder),y,descendant of concept mapped from leaf +423384009,Secondary malignant neoplasm of lacrimal gland duct (disorder),y,descendant of concept mapped from leaf +707396004,Primary oxyphilic adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +95226002,Reticulosarcoma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +424440001,Adenocarcinoma of small intestine (disorder),y,descendant of concept mapped from leaf +94279001,Secondary malignant neoplasm of endocervix (disorder),y,descendant of concept mapped from leaf +402912009,Vulval verrucous carcinoma of Buschke-Löwenstein (disorder),y,descendant of concept mapped from leaf +94339008,Secondary malignant neoplasm of inguinal lymph nodes (disorder),y,descendant of concept mapped from leaf +404154007,Leukemic infiltration of skin in monocytic leukemia (disorder),y,descendant of concept mapped from leaf +402515003,Basal cell carcinoma of anterior chest (disorder),y,descendant of concept mapped from leaf +699356008,Endometrial stromal sarcoma (disorder),y,descendant of concept mapped from leaf +711414003,Primary clear cell adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +93143009,"Leukemia, disease (disorder)",y,descendant of concept mapped from leaf +94341009,Secondary malignant neoplasm of inner aspect of lip (disorder),y,descendant of concept mapped from leaf +94285008,Secondary malignant neoplasm of epitrochlear lymph nodes (disorder),y,descendant of concept mapped from leaf +703618009,Sclerosing epithelioid fibrosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +109979007,B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +448372003,Non-Hodgkin's lymphoma of lung (disorder),y,descendant of concept mapped from leaf +723887001,Primary Ewing sarcoma of bone of rib (disorder),y,descendant of concept mapped from leaf +93641007,Malignant melanoma of skin of lower limb (disorder),y,descendant of concept mapped from leaf +94194009,Secondary malignant neoplasm of blood vessel of forearm (disorder),y,descendant of concept mapped from leaf +94132005,Primary malignant neoplasm of vallecula (disorder),y,descendant of concept mapped from leaf +448314007,Malignant epithelial neoplasm of spinal cord (disorder),y,descendant of concept mapped from leaf +447951009,Ewing's sarcoma of soft tissue (disorder),y,descendant of concept mapped from leaf +109968002,"Diffuse non-Hodgkin's lymphoma, small cell (disorder)",y,descendant of concept mapped from leaf +94040002,Primary malignant neoplasm of skin of temporal region (disorder),y,descendant of concept mapped from leaf +188569008,"Hodgkin's disease, nodular sclerosis of lymph nodes of inguinal region and lower limb (disorder)",y,descendant of concept mapped from leaf +188577007,"Hodgkin's disease, mixed cellularity of intra-abdominal lymph nodes (disorder)",y,descendant of concept mapped from leaf +722685004,Primary high grade serous adenocarcinoma of ovary (disorder),y,descendant of concept mapped from leaf +724467001,Primary squamous cell carcinoma of overlapping lesion of urinary organs (disorder),y,descendant of concept mapped from leaf +681631000119108,Primary adenocarcinoma of body of stomach (disorder),y,descendant of concept mapped from leaf +94042005,Primary malignant neoplasm of skin of toe (disorder),y,descendant of concept mapped from leaf +397009000,Mast cell malignancy (disorder),y,descendant of concept mapped from leaf +733470002,Collecting duct carcinoma of kidney (disorder),y,descendant of concept mapped from leaf +721313009,Indeterminate dendritic cell neoplasm (disorder),y,descendant of concept mapped from leaf +707455001,Primary papillary squamous cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +4230004,Pacinian tumor (morphologic abnormality),y,descendant of concept mapped from leaf +403914000,Superficial basal cell carcinoma (disorder),y,descendant of concept mapped from leaf +707672001,Pleuropulmonary blastoma type II (disorder),y,descendant of concept mapped from leaf +109386008,Kaposi's sarcoma of skin (disorder),y,descendant of concept mapped from leaf +94613003,Secondary malignant neoplasm of superior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +707481002,Primary basaloid squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +423318000,Adenoid cystic carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +431396003,Human epidermal growth factor 2 negative carcinoma of breast (disorder),y,descendant of concept mapped from leaf +94551006,Secondary malignant neoplasm of skin of external auditory canal (disorder),y,descendant of concept mapped from leaf +188127001,Malignant neoplasm of skin of lower limb and hip (disorder),y,descendant of concept mapped from leaf +724553007,Primary undifferentiated carcinoma of thyroid gland (disorder),y,descendant of concept mapped from leaf +94080006,Primary malignant neoplasm of supraglottis (disorder),y,descendant of concept mapped from leaf +698286006,Malignant melanoma of palate (disorder),y,descendant of concept mapped from leaf +371971003,Primary malignant neoplasm of body of uterus (disorder),y,descendant of concept mapped from leaf +408642003,Transitional cell carcinoma of kidney (disorder),y,descendant of concept mapped from leaf +94552004,Secondary malignant neoplasm of skin of eyebrow (disorder),y,descendant of concept mapped from leaf +373089009,Primary malignant neoplasm of breast upper inner quadrant (disorder),y,descendant of concept mapped from leaf +254650008,Malignant epithelial neoplasm of skin (disorder),y,descendant of concept mapped from leaf +722678003,Primary squamous cell carcinoma of vagina (disorder),y,descendant of concept mapped from leaf +94422005,Secondary malignant neoplasm of muscle of hip (disorder),y,descendant of concept mapped from leaf +403951006,Ceruminous gland adenocarcinoma of skin (disorder),y,descendant of concept mapped from leaf +764735002,Squamous cell carcinoma of small intestine (disorder),y,descendant of concept mapped from leaf +93144003,Leukemic reticuloendotheliosis of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +92510008,Burkitt's tumor of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +94519005,Secondary malignant neoplasm of retroperitoneal lymph nodes (disorder),y,descendant of concept mapped from leaf +449295001,Sarcoma of skull (disorder),y,descendant of concept mapped from leaf +404113004,Tumor stage mycosis fungoides (disorder),y,descendant of concept mapped from leaf +404067008,Adipocytic liposarcoma (disorder),y,descendant of concept mapped from leaf +94092006,Primary malignant neoplasm of retroperitoneum (disorder),y,descendant of concept mapped from leaf +94023006,Primary malignant neoplasm of skin of finger (disorder),y,descendant of concept mapped from leaf +717921000,Poorly-differentiated neuroendocrine carcinoma of thymus (disorder),y,descendant of concept mapped from leaf +764991004,Renal mucinous tubular and spindle cell carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +94676002,Secondary malignant neoplasm of vestibule of mouth (disorder),y,descendant of concept mapped from leaf +707671008,Pleuropulmonary blastoma type I (disorder),y,descendant of concept mapped from leaf +188668006,Mast cell malignancy of spleen (disorder),y,descendant of concept mapped from leaf +449259009,Malignant neoplasm of broad ligament of uterus (disorder),y,descendant of concept mapped from leaf +422833009,Adenoid cystic carcinoma of salivary gland (disorder),y,descendant of concept mapped from leaf +722707001,Metastatic malignant neoplasm of peripheral nervous system (disorder),y,descendant of concept mapped from leaf +93796005,Primary malignant neoplasm of female breast (disorder),y,descendant of concept mapped from leaf +107601000119107,Primary transitional cell carcinoma of urethra (disorder),y,descendant of concept mapped from leaf +863761000000109,Clinical stage B chronic lymphocytic leukaemia (disorder),y,descendant of concept mapped from leaf +109989006,Multiple myeloma (disorder),y,descendant of concept mapped from leaf +372024009,Primary malignant neoplasm of uterine cervix (disorder),y,descendant of concept mapped from leaf +363745004,Primary malignant neoplasm of gastrointestinal tract (disorder),y,descendant of concept mapped from leaf +94714002,Mycosis fungoides of spleen (disorder),y,descendant of concept mapped from leaf +402542002,Basal cell carcinoma recurrent following cryosurgery (disorder),y,descendant of concept mapped from leaf +93981003,Primary malignant neoplasm of rectouterine pouch (disorder),y,descendant of concept mapped from leaf +93198004,Malignant lymphoma of spleen (disorder),y,descendant of concept mapped from leaf +94302007,Secondary malignant neoplasm of first cuneiform bone of foot (disorder),y,descendant of concept mapped from leaf +372008008,Primary malignant neoplasm of scaphoid bone (disorder),y,descendant of concept mapped from leaf +94236003,Secondary malignant neoplasm of calcaneus (disorder),y,descendant of concept mapped from leaf +93966009,Primary malignant neoplasm of pleura (disorder),y,descendant of concept mapped from leaf +369499000,Malignant tumor involving uterine cervix by direct extension from vagina (disorder),y,descendant of concept mapped from leaf +413843002,Chronic myeloid leukemia in myeloid blast crisis (disorder),y,descendant of concept mapped from leaf +94038007,Primary malignant neoplasm of skin of scalp (disorder),y,descendant of concept mapped from leaf +404149003,"Lymphoplasmacytic B-cell lymphoma, nodal/systemic with skin involvement (disorder)",y,descendant of concept mapped from leaf +128792003,Atypical teratoid/rhabdoid tumor (morphologic abnormality),y,descendant of concept mapped from leaf +369588000,Malignant tumor involving vulva by separate metastasis from endometrium (disorder),y,descendant of concept mapped from leaf +762458004,Primary endometrioid carcinoma of endometrium of body of uterus (disorder),y,descendant of concept mapped from leaf +422758009,Carcinoma of nasal meatus (disorder),y,descendant of concept mapped from leaf +369516006,Malignant tumor involving left fallopian tube by direct extension from ovary (disorder),y,descendant of concept mapped from leaf +93138002,Letterer-Siwe disease of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +188529007,Hodgkin's paragranuloma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +94675003,Secondary malignant neoplasm of vermilion border of upper lip (disorder),y,descendant of concept mapped from leaf +94390009,Secondary malignant neoplasm of lunate bone (disorder),y,descendant of concept mapped from leaf +369502001,Malignant tumor involving uterine corpus by separate metastasis from bladder (disorder),y,descendant of concept mapped from leaf +681601000119101,Primary adenocarcinoma of ascending colon (disorder),y,descendant of concept mapped from leaf +369510000,Malignant tumor involving vulva by direct extension from uterine cervix (disorder),y,descendant of concept mapped from leaf +94016005,Primary malignant neoplasm of skin of chin (disorder),y,descendant of concept mapped from leaf +404169008,Malignant histiocytosis involving skin (disorder),y,descendant of concept mapped from leaf +443144000,Metastatic sarcoma (disorder),y,descendant of concept mapped from leaf +93783009,Primary malignant neoplasm of epididymis (disorder),y,descendant of concept mapped from leaf +188512009,Burkitt's lymphoma of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +726654006,Malignant carcinoid tumor of colon (disorder),y,descendant of concept mapped from leaf +94296000,Secondary malignant neoplasm of false vocal cord (disorder),y,descendant of concept mapped from leaf +404053004,Alveolar rhabdomyosarcoma (disorder),y,descendant of concept mapped from leaf +93230002,Malignant melanoma of skin of groin (disorder),y,descendant of concept mapped from leaf +447730004,Chordoma of sacrum (disorder),y,descendant of concept mapped from leaf +94651003,Secondary malignant neoplasm of undescended testis (disorder),y,descendant of concept mapped from leaf +92512000,"Burkitt's tumor of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +128466006,Primary malignant neoplasm of articular cartilage (disorder),y,descendant of concept mapped from leaf +763064007,Adenoid cystic carcinoma of cervix uteri (disorder),y,descendant of concept mapped from leaf +128816008,Follicular dendritic cell sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +94191001,Secondary malignant neoplasm of blood vessel of face (disorder),y,descendant of concept mapped from leaf +188630009,"Sézary's disease of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +737308008,Primary adenocarcinoma of sublingual gland (disorder),y,descendant of concept mapped from leaf +733843002,Anaplastic oligodendroglioma with isocitrate dehydrogenase mutant and 1p/19q-codeleted (morphologic abnormality),y,descendant of concept mapped from leaf +766757006,Undifferentiated carcinoma of stomach (disorder),y,descendant of concept mapped from leaf +449207003,Sarcoma of humerus (disorder),y,descendant of concept mapped from leaf +93516008,"Hodgkin's disease, nodular sclerosis of lymph nodes of inguinal region AND/OR lower limb (disorder)",y,descendant of concept mapped from leaf +93210001,Malignant melanoma of skin of abdomen (disorder),y,descendant of concept mapped from leaf +93992002,Primary malignant neoplasm of right middle lobe of lung (disorder),y,descendant of concept mapped from leaf +188506004,Lymphosarcoma of spleen (disorder),y,descendant of concept mapped from leaf +707458004,Primary pleomorphic carcinoma of lung (disorder),y,descendant of concept mapped from leaf +722509001,Primary rhabdomyosarcoma of oral cavity (disorder),y,descendant of concept mapped from leaf +404045007,Epithelioid leiomyosarcoma of skin (disorder),y,descendant of concept mapped from leaf +449472007,Malignant epithelial neoplasm of alveolus dentalis (disorder),y,descendant of concept mapped from leaf +107751000119102,Primary malignant mixed Mullerian neoplasm of endometrium (disorder),y,descendant of concept mapped from leaf +307635002,"Hodgkin's disease, nodular sclerosis - cellular phase (disorder)",y,descendant of concept mapped from leaf +721638007,Primary neuroendocrine carcinoma of stomach (disorder),y,descendant of concept mapped from leaf +733136006,Primary adenocarcinoma of urethra (disorder),y,descendant of concept mapped from leaf +716586009,Carcinoma of stomach due to Epstein-Barr virus disease (disorder),y,descendant of concept mapped from leaf +93951006,Primary malignant neoplasm of pelvic bone (disorder),y,descendant of concept mapped from leaf +94001007,Primary malignant neoplasm of second cuneiform bone of foot (disorder),y,descendant of concept mapped from leaf +443493003,Metastatic malignant melanoma (disorder),y,descendant of concept mapped from leaf +447109003,Primary malignant neoplasm of intrahepatic bile duct (disorder),y,descendant of concept mapped from leaf +863741000000108,Clinical stage A chronic lymphocytic leukaemia (disorder),y,descendant of concept mapped from leaf +371967001,Primary malignant neoplasm of ampulla of Vater (disorder),y,descendant of concept mapped from leaf +302842009,Diffuse malignant lymphoma - centroblastic (disorder),y,descendant of concept mapped from leaf +722514002,Primary leiomyosarcoma of peritoneum (disorder),y,descendant of concept mapped from leaf +423325007,Basal cell carcinoma of external auditory canal (disorder),y,descendant of concept mapped from leaf +94322006,Secondary malignant neoplasm of hamate bone (disorder),y,descendant of concept mapped from leaf +94022001,Primary malignant neoplasm of skin of face (disorder),y,descendant of concept mapped from leaf +79281000119106,Primary adenocarcinoma of skin (disorder),y,descendant of concept mapped from leaf +447100004,Marginal zone lymphoma (disorder),y,descendant of concept mapped from leaf +93829002,Primary malignant neoplasm of hypopharyngeal aspect of aryepiglottic fold (disorder),y,descendant of concept mapped from leaf +734095001,Primary solid type intraosseous squamous cell carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +254702000,Basosquamous carcinoma of skin (disorder),y,descendant of concept mapped from leaf +372113005,"Carcinoma of middle lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +403925009,Neurotropic malignant melanoma (disorder),y,descendant of concept mapped from leaf +94326009,Secondary malignant neoplasm of head (disorder),y,descendant of concept mapped from leaf +93942003,Primary malignant neoplasm of parametrium (disorder),y,descendant of concept mapped from leaf +404108003,Poikilodermatous mycosis fungoides (disorder),y,descendant of concept mapped from leaf +724536000,Primary adenocarcinoma of ileum (disorder),y,descendant of concept mapped from leaf +396891002,Mixed acinar-endocrine carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +15956381000119100,Adenocarcinoma of right lung (disorder),y,descendant of concept mapped from leaf +707705008,Nonkeratinizing carcinoma of the nasopharynx (disorder),y,descendant of concept mapped from leaf +403940006,Clear cell eccrine hidradenocarcinoma of skin (disorder),y,descendant of concept mapped from leaf +707587000,Primary carcinoma ex pleomorphic adenoma of oropharynx (disorder),y,descendant of concept mapped from leaf +449487002,Malignant epithelial neoplasm of mandible (disorder),y,descendant of concept mapped from leaf +94311007,Secondary malignant neoplasm of fundus of stomach (disorder),y,descendant of concept mapped from leaf +448216007,Malignant epithelial neoplasm of thyroid (disorder),y,descendant of concept mapped from leaf +61471000119100,Basal cell carcinoma of naris (disorder),y,descendant of concept mapped from leaf +307622006,Prolymphocytic lymphosarcoma (disorder),y,descendant of concept mapped from leaf +369491002,Malignant tumor involving seminal vesicle by separate metastasis from bladder (disorder),y,descendant of concept mapped from leaf +444604002,Carcinoma of breast with ductal and lobular features (disorder),y,descendant of concept mapped from leaf +94320003,Secondary malignant neoplasm of greater curvature of stomach (disorder),y,descendant of concept mapped from leaf +94257006,Secondary malignant neoplasm of clitoris (disorder),y,descendant of concept mapped from leaf +449206007,Sarcoma of tibia (disorder),y,descendant of concept mapped from leaf +449055006,Leiomyosarcoma of cardioesophageal junction (disorder),y,descendant of concept mapped from leaf +188514005,Burkitt's lymphoma of lymph nodes of inguinal region and lower limb (disorder),y,descendant of concept mapped from leaf +94291000119103,Mucinous adenocarcinoma of gastrointestinal tract (disorder),y,descendant of concept mapped from leaf +255102004,Angioendotheliomatosis (disorder),y,descendant of concept mapped from leaf +733357007,Primary squamous cell carcinoma of intrathoracic organ (disorder),y,descendant of concept mapped from leaf +722828003,Primary synovial sarcoma of intrathoracic organ (disorder),y,descendant of concept mapped from leaf +397008008,Aggressive lymphadenopathic mastocytosis with eosinophilia (disorder),y,descendant of concept mapped from leaf +721641003,Primary neuroendocrine carcinoma of pyloric antrum of stomach (disorder),y,descendant of concept mapped from leaf +277625002,Follicular malignant lymphoma - small cleaved cell (disorder),y,descendant of concept mapped from leaf +423595004,Adenocarcinoma carcinomatosis (disorder),y,descendant of concept mapped from leaf +94082003,Primary malignant neoplasm of tail of pancreas (disorder),y,descendant of concept mapped from leaf +94307001,Secondary malignant neoplasm of prepuce (disorder),y,descendant of concept mapped from leaf +188538009,Hodgkin's granuloma of lymph nodes of inguinal region and lower limb (disorder),y,descendant of concept mapped from leaf +448864006,Malignant epithelial neoplasm of ureter (disorder),y,descendant of concept mapped from leaf +94345000,Secondary malignant neoplasm of intestinal lymph nodes (disorder),y,descendant of concept mapped from leaf +733607005,Papillary renal cell carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +94034009,Primary malignant neoplasm of skin of neck (disorder),y,descendant of concept mapped from leaf +722680009,Primary serous adenocarcinoma of endometrium (disorder),y,descendant of concept mapped from leaf +93530003,Hodgkin's granuloma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +93858004,Primary malignant neoplasm of laryngeal surface of epiglottis (disorder),y,descendant of concept mapped from leaf +369594008,Malignant tumor involving an organ by direct extension from bladder (disorder),y,descendant of concept mapped from leaf +93737003,Primary malignant neoplasm of calcaneus (disorder),y,descendant of concept mapped from leaf +93771007,Primary malignant neoplasm of descending colon (disorder),y,descendant of concept mapped from leaf +443487006,Mantle cell lymphoma (disorder),y,descendant of concept mapped from leaf +128734000,Undifferentiated sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +717736007,Familial renal cell carcinoma (disorder),y,descendant of concept mapped from leaf +94501001,Secondary malignant neoplasm of preauricular lymph nodes (disorder),y,descendant of concept mapped from leaf +716647001,Mixed oligoastrocytoma (disorder),y,descendant of concept mapped from leaf +735919002,Primary malignant neuroepithelial neoplasm of iris (disorder),y,descendant of concept mapped from leaf +93724001,Primary malignant neoplasm of bone of upper limb (disorder),y,descendant of concept mapped from leaf +93133006,Letterer-Siwe disease of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +123842006,Endocervical adenocarcinoma (disorder),y,descendant of concept mapped from leaf +722515001,Primary liposarcoma of retroperitoneum (disorder),y,descendant of concept mapped from leaf +766046007,Acute myeloid leukemia and myelodysplastic syndrome related to topoisomerase type 2 inhibitor (disorder),y,descendant of concept mapped from leaf +417181009,Hormone receptor positive malignant neoplasm of breast (disorder),y,descendant of concept mapped from leaf +449267001,Sarcoma of mandible (disorder),y,descendant of concept mapped from leaf +94010004,Primary malignant neoplasm of skin of axilla (disorder),y,descendant of concept mapped from leaf +721630000,Primary adenocarcinoma of cardia of stomach (disorder),y,descendant of concept mapped from leaf +354671000119106,Primary malignant neoplasm of bone of right upper limb (disorder),y,descendant of concept mapped from leaf +188631008,Sézary's disease of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +403916003,Basal cell carcinoma of forehead (disorder),y,descendant of concept mapped from leaf +118605002,"Hodgkin lymphoma, nodular lymphocyte predominance (disorder)",y,descendant of concept mapped from leaf +93195001,"Malignant lymphoma of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +118615008,Malignant mast cell tumor (disorder),y,descendant of concept mapped from leaf +240163000,Malignant neoplasm of nasopharyngeal wall (disorder),y,descendant of concept mapped from leaf +93507009,"Hodgkin's disease, mixed cellularity of lymph nodes of inguinal region AND/OR lower limb (disorder)",y,descendant of concept mapped from leaf +354651000119102,Primary malignant neoplasm of bone of left lower limb (disorder),y,descendant of concept mapped from leaf +93994001,Primary malignant neoplasm of round ligament of uterus (disorder),y,descendant of concept mapped from leaf +447784001,Sarcoma of axillary tail of female breast (disorder),y,descendant of concept mapped from leaf +820601000000103,Refractory anaemia with multilineage dysplasia (disorder),y,descendant of concept mapped from leaf +707592003,Primary infiltrating duct carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +109985000,Immunoproliferative small intestinal disease (disorder),y,descendant of concept mapped from leaf +93848003,Primary malignant neoplasm of junctional zone of tongue (disorder),y,descendant of concept mapped from leaf +94214001,Secondary malignant neoplasm of body of stomach (disorder),y,descendant of concept mapped from leaf +413537009,Angioimmunoblastic T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +449217008,Diffuse non-Hodgkin's lymphoma of skin (disorder),y,descendant of concept mapped from leaf +307647008,"Malignant lymphoma, centroblastic type, follicular (disorder)",y,descendant of concept mapped from leaf +1681000119102,Metastasis to lymph node from adenocarcinoma (disorder),y,descendant of concept mapped from leaf +715215007,Chromosome 11p13 deletion syndrome (disorder),y,descendant of concept mapped from leaf +448300007,Malignant melanoma of skin of vulva (disorder),y,descendant of concept mapped from leaf +94389000,Secondary malignant neoplasm of lumbar vertebral column (disorder),y,descendant of concept mapped from leaf +403468003,Squamous cell carcinoma of penis (disorder),y,descendant of concept mapped from leaf +448561007,Follicular non-Hodgkin's lymphoma of extranodal site (disorder),y,descendant of concept mapped from leaf +414791003,"Myelodysplastic syndrome, unclassified by World Health Organization classification (disorder)",y,descendant of concept mapped from leaf +423793008,Mucoepidermoid carcinoma of parotid gland (disorder),y,descendant of concept mapped from leaf +307636001,"Malignant lymphoma, mixed lymphocytic-histiocytic, nodular (disorder)",y,descendant of concept mapped from leaf +93969002,Primary malignant neoplasm of posterior mediastinum (disorder),y,descendant of concept mapped from leaf +94048009,Primary malignant neoplasm of small intestine (disorder),y,descendant of concept mapped from leaf +94427004,Secondary malignant neoplasm of muscle of perineum (disorder),y,descendant of concept mapped from leaf +766048008,Acute myeloid leukemia and myelodysplastic syndrome related to radiation (disorder),y,descendant of concept mapped from leaf +404069006,Myxoid liposarcoma (disorder),y,descendant of concept mapped from leaf +447766003,Lymphoma of pyloric antrum of stomach (disorder),y,descendant of concept mapped from leaf +372022008,Primary malignant neoplasm of upper gum (disorder),y,descendant of concept mapped from leaf +307649006,Microglioma (disorder),y,descendant of concept mapped from leaf +94379004,Secondary malignant neoplasm of lingual tonsil (disorder),y,descendant of concept mapped from leaf +93956001,Primary malignant neoplasm of perianal skin (disorder),y,descendant of concept mapped from leaf +721580001,Primary myosarcoma of omentum (disorder),y,descendant of concept mapped from leaf +396198006,Small cell carcinoma of prostate (disorder),y,descendant of concept mapped from leaf +369578001,Malignant tumor involving uterine corpus by separate metastasis from vagina (disorder),y,descendant of concept mapped from leaf +399954008,Basal cell carcinoma of earlobe (disorder),y,descendant of concept mapped from leaf +110004001,"Acute promyelocytic leukemia, FAB M3 (disorder)",y,descendant of concept mapped from leaf +447712006,Malignant melanoma of skin of anus (disorder),y,descendant of concept mapped from leaf +707389001,Primary clear cell squamous cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +707411007,Primary papillary adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +372107001,Primary malignant neoplasm of ribs and/or sternum and/or clavicle (disorder),y,descendant of concept mapped from leaf +713483007,Reticulosarcoma co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +404115006,Bullous mycosis fungoides (disorder),y,descendant of concept mapped from leaf +403905005,Multiple squamous cell carcinomata (disorder),y,descendant of concept mapped from leaf +715901002,Ependymoblastoma (disorder),y,descendant of concept mapped from leaf +725437002,Chronic lymphocytic leukemia genetic mutation variant (disorder),y,descendant of concept mapped from leaf +403890009,Squamous cell carcinoma of vulva due to lichen sclerosus (disorder),y,descendant of concept mapped from leaf +373888000,Extrauterine adenocarcinoma (disorder),y,descendant of concept mapped from leaf +415283002,Refractory anemia with excess blasts-1 (disorder),y,descendant of concept mapped from leaf +94388008,Secondary malignant neoplasm of lower third of esophagus (disorder),y,descendant of concept mapped from leaf +369563008,Malignant tumor involving left ovary by separate metastasis from uterine cervix (disorder),y,descendant of concept mapped from leaf +94653000,Secondary malignant neoplasm of upper inner quadrant of female breast (disorder),y,descendant of concept mapped from leaf +93693009,Primary malignant neoplasm of blood vessel of buttock (disorder),y,descendant of concept mapped from leaf +713574000,Malignant carcinoid tumor of kidney (disorder),y,descendant of concept mapped from leaf +448269008,Lymphoma of lesser curvature of stomach (disorder),y,descendant of concept mapped from leaf +721568009,Primary adenocarcinoma of parametrium (disorder),y,descendant of concept mapped from leaf +188593003,"Hodgkin's disease, lymphocytic depletion of lymph nodes of multiple sites (disorder)",y,descendant of concept mapped from leaf +715903004,Medulloepithelioma (disorder),y,descendant of concept mapped from leaf +369512008,Malignant tumor involving vagina by direct extension from ovary (disorder),y,descendant of concept mapped from leaf +404054005,Pleomorphic rhabdomyosarcoma (disorder),y,descendant of concept mapped from leaf +767444009,Germline BRCA-mutated human epidermal growth factor receptor 2 negative metastatic carcinoma of breast (disorder),y,descendant of concept mapped from leaf +764845008,Adenocarcinoma of anal canal (disorder),y,descendant of concept mapped from leaf +94373003,Secondary malignant neoplasm of lateral wall of oropharynx (disorder),y,descendant of concept mapped from leaf +254639005,Carcinoma in situ of lung parenchyma (disorder),y,descendant of concept mapped from leaf +93756008,"Primary malignant neoplasm of ciliary body, primary (disorder)",y,descendant of concept mapped from leaf +765328000,Classic mycosis fungoides (disorder),y,descendant of concept mapped from leaf +92516002,Burkitt's tumor of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +91041000119104,Ewing sarcoma of bone structure of upper limb (disorder),y,descendant of concept mapped from leaf +369551003,Malignant tumor involving right fallopian tube by direct extension from uterus (disorder),y,descendant of concept mapped from leaf +109858008,Malignant mesothelioma of omentum (disorder),y,descendant of concept mapped from leaf +313429000,Seminoma of descended testis (disorder),y,descendant of concept mapped from leaf +698044008,Malignant melanoma of palatine arch (disorder),y,descendant of concept mapped from leaf +722518004,Primary malignant nerve sheath neoplasm of autonomic nerve (disorder),y,descendant of concept mapped from leaf +128756002,Gastrointestinal stromal sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +402505009,Basal cell carcinoma of upper lip (disorder),y,descendant of concept mapped from leaf +707662004,Primary basaloid squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +188663002,Mast cell malignancy of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +93940006,Primary malignant neoplasm of para-aortic body (disorder),y,descendant of concept mapped from leaf +277626001,Diffuse high grade B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +13583002,Mast cell sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +314954002,Local recurrence of malignant tumor of lung (disorder),y,descendant of concept mapped from leaf +369495006,Malignant tumor involving uterine corpus by direct extension from uterine cervix (disorder),y,descendant of concept mapped from leaf +94122003,Primary malignant neoplasm of ureteric orifice of urinary bladder (disorder),y,descendant of concept mapped from leaf +369505004,Malignant tumor involving vagina by direct extension from endometrium (disorder),y,descendant of concept mapped from leaf +12060004,Ganglioneuromatosis (morphologic abnormality),y,descendant of concept mapped from leaf +109880006,Overlapping malignant neoplasm of uterine cervix (disorder),y,descendant of concept mapped from leaf +128794002,"Retinoblastoma, spontaneously regressed (morphologic abnormality)",y,descendant of concept mapped from leaf +94342002,Secondary malignant neoplasm of inner aspect of lower lip (disorder),y,descendant of concept mapped from leaf +93519001,"Hodgkin's disease, nodular sclerosis of extranodal AND/OR solid organ site (disorder)",y,descendant of concept mapped from leaf +733360000,Primary undifferentiated carcinoma of endometrium (disorder),y,descendant of concept mapped from leaf +371978009,Primary malignant neoplasm of cervical esophagus (disorder),y,descendant of concept mapped from leaf +93182006,Malignant histiocytosis of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +369461007,Malignant tumor involving rectum by separate metastasis from vagina (disorder),y,descendant of concept mapped from leaf +93899005,Primary malignant neoplasm of muscle of abdomen (disorder),y,descendant of concept mapped from leaf +699355007,Leiomyosarcoma of orbit (disorder),y,descendant of concept mapped from leaf +118618005,Mycosis fungoides (disorder),y,descendant of concept mapped from leaf +93739000,Primary malignant neoplasm of carina (disorder),y,descendant of concept mapped from leaf +707470000,Primary mucinous bronchiolo-alveolar carcinoma of lung (disorder),y,descendant of concept mapped from leaf +188741003,Aleukemic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +147131000119101,Glioblastoma multiforme of central nervous system (disorder),y,descendant of concept mapped from leaf +109994006,Essential thrombocythemia (disorder),y,descendant of concept mapped from leaf +424666005,Basal cell carcinoma of auricle of ear (disorder),y,descendant of concept mapped from leaf +93532006,Hodgkin's granuloma of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +413389003,Accelerated phase chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +425688002,Philadelphia chromosome-positive acute lymphoblastic leukemia (disorder),y,descendant of concept mapped from leaf +94369001,Secondary malignant neoplasm of laryngeal surface of epiglottis (disorder),y,descendant of concept mapped from leaf +372023003,Primary malignant neoplasm of upper third of esophagus (disorder),y,descendant of concept mapped from leaf +128911002,"Teratoid medulloepithelioma, benign (morphologic abnormality)",y,descendant of concept mapped from leaf +10745291000119103,Malignant neoplastic disease in mother complicating childbirth (disorder),y,descendant of concept mapped from leaf +93875005,Primary malignant neoplasm of lower limb (disorder),y,descendant of concept mapped from leaf +423627007,Sarcoma of ovary (disorder),y,descendant of concept mapped from leaf +93526001,Hodgkin's disease of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +734522002,Acute myeloid leukemia with FMS-like tyrosine kinase-3 mutation (disorder),y,descendant of concept mapped from leaf +449308006,Malignant neoplasm of visceral pleura (disorder),y,descendant of concept mapped from leaf +764847000,Adenosarcoma of cervix uteri (disorder),y,descendant of concept mapped from leaf +718195003,Inherited predisposition to essential thrombocythemia (disorder),y,descendant of concept mapped from leaf +707467004,Primary salivary gland type carcinoma of lung (disorder),y,descendant of concept mapped from leaf +369474001,Malignant tumor involving bladder by direct extension from uterus (disorder),y,descendant of concept mapped from leaf +94561004,Secondary malignant neoplasm of skin of hip (disorder),y,descendant of concept mapped from leaf +448995000,Follicular non-Hodgkin's lymphoma of central nervous system (disorder),y,descendant of concept mapped from leaf +93647006,Malignant melanoma of skin of shoulder (disorder),y,descendant of concept mapped from leaf +403979000,Kaposi's sarcoma - endemic (disorder),y,descendant of concept mapped from leaf +449208008,Sarcoma of coccyx (disorder),y,descendant of concept mapped from leaf +426642002,"Erythroleukemia, FAB M6 in remission (disorder)",y,descendant of concept mapped from leaf +188121000,Malignant neoplasm of skin of upper arm (disorder),y,descendant of concept mapped from leaf +423195009,Primary malignant neoplasm of lacrimal drainage system (disorder),y,descendant of concept mapped from leaf +94164003,Secondary malignant neoplasm of ampulla of Vater (disorder),y,descendant of concept mapped from leaf +723855004,Primary Ewing sarcoma of articular cartilage of pelvis (disorder),y,descendant of concept mapped from leaf +402520003,Basal cell carcinoma of hand (disorder),y,descendant of concept mapped from leaf +402880009,Primary cutaneous large T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +94221001,Secondary malignant neoplasm of bone of upper limb (disorder),y,descendant of concept mapped from leaf +369493004,Malignant tumor involving uterine corpus by direct extension from bladder (disorder),y,descendant of concept mapped from leaf +448989001,Malignant epithelial neoplasm of brain (disorder),y,descendant of concept mapped from leaf +93222003,Malignant melanoma of skin of external auditory canal (disorder),y,descendant of concept mapped from leaf +448774004,Non-Hodgkin's lymphoma of uterine cervix (disorder),y,descendant of concept mapped from leaf +369514009,Secondary malignant neoplasm of left fallopian tube (disorder),y,descendant of concept mapped from leaf +107691000119101,Non-seminomatous germ cell neoplasm of testis (disorder),y,descendant of concept mapped from leaf +698011002,Keratinizing squamous cell carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +254619006,Adenoid cystic carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +707343008,Primary adenocarcinoma of frontal sinus (disorder),y,descendant of concept mapped from leaf +404117003,Spongiotic mycosis fungoides (disorder),y,descendant of concept mapped from leaf +188744006,Monocytic leukemia (disorder),y,descendant of concept mapped from leaf +369587005,Malignant tumor involving vulva by direct extension from vagina (disorder),y,descendant of concept mapped from leaf +133871000119103,Merkel cell carcinoma of upper limb (disorder),y,descendant of concept mapped from leaf +735916009,Primary malignant neuroepithelial neoplasm of retina (disorder),y,descendant of concept mapped from leaf +92573003,Carcinoma in situ of craniopharyngeal duct (disorder),y,descendant of concept mapped from leaf +733881007,MiT family translocation renal cell carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +93839008,Primary malignant neoplasm of intra-abdominal organs (disorder),y,descendant of concept mapped from leaf +699229009,Intraosseous mucoepidermoid carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +372009000,Primary malignant neoplasm of scrotum (disorder),y,descendant of concept mapped from leaf +254632001,Small cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +94165002,Secondary malignant neoplasm of anal canal (disorder),y,descendant of concept mapped from leaf +93917007,Primary malignant neoplasm of nasal cavity (disorder),y,descendant of concept mapped from leaf +96291000119105,Primary malignant inflammatory neoplasm of female breast (disorder),y,descendant of concept mapped from leaf +372093008,Secondary malignant neoplasm of axillary tail of breast (disorder),y,descendant of concept mapped from leaf +94558000,Secondary malignant neoplasm of skin of forehead (disorder),y,descendant of concept mapped from leaf +94126000,Primary malignant neoplasm of uterine adnexa (disorder),y,descendant of concept mapped from leaf +399712003,Seminoma with syncytiotrophoblastic cells (morphologic abnormality),y,descendant of concept mapped from leaf +94372008,Secondary malignant neoplasm of lateral wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +413847001,Chronic phase chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +370511006,Vaccine-induced fibrosarcoma (disorder),y,descendant of concept mapped from leaf +94533005,Secondary malignant neoplasm of second cuneiform bone of foot (disorder),y,descendant of concept mapped from leaf +188554007,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +404124002,Leukemic infiltration of skin (T-cell lymphoblastic leukemia) (disorder),y,descendant of concept mapped from leaf +277627005,Nodular high grade B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +128796000,"Perineurioma, malignant (morphologic abnormality)",y,descendant of concept mapped from leaf +94564007,Secondary malignant neoplasm of skin of lip (disorder),y,descendant of concept mapped from leaf +94252000,Secondary malignant neoplasm of cheek (disorder),y,descendant of concept mapped from leaf +369496007,Malignant tumor involving uterine corpus by direct extension from vagina (disorder),y,descendant of concept mapped from leaf +93787005,Primary malignant neoplasm of ethmoidal sinus (disorder),y,descendant of concept mapped from leaf +363432004,Malignant tumor of trachea (disorder),y,descendant of concept mapped from leaf +707422006,Primary spindle cell squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +94053004,Primary malignant neoplasm of soft tissues of face (disorder),y,descendant of concept mapped from leaf +92811003,Chronic leukemia in remission (disorder),y,descendant of concept mapped from leaf +109851002,Overlapping malignant neoplasm of retroperitoneum and peritoneum (disorder),y,descendant of concept mapped from leaf +448994001,Malignant epithelial neoplasm of upper rectum (disorder),y,descendant of concept mapped from leaf +359648001,"Acute myeloid leukemia with maturation, FAB M2 (disorder)",y,descendant of concept mapped from leaf +94055006,Primary malignant neoplasm of soft tissues of hip (disorder),y,descendant of concept mapped from leaf +254629004,Large cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +93725000,Primary malignant neoplasm of bone (disorder),y,descendant of concept mapped from leaf +93894000,Primary malignant neoplasm of middle ear (disorder),y,descendant of concept mapped from leaf +764856008,Acquired cystic disease associated renal cell carcinoma (disorder),y,descendant of concept mapped from leaf +707475005,Primary adenocarcinoma of trachea (disorder),y,descendant of concept mapped from leaf +94096009,Primary malignant neoplasm of thymus (disorder),y,descendant of concept mapped from leaf +188768003,Myelomonocytic leukemia (disorder),y,descendant of concept mapped from leaf +369517002,Malignant tumor involving left fallopian tube by direct extension from right fallopian tube (disorder),y,descendant of concept mapped from leaf +448990005,Malignant epithelial neoplasm of nasal cavity (disorder),y,descendant of concept mapped from leaf +93224002,Malignant melanoma of skin of eyelid (disorder),y,descendant of concept mapped from leaf +404056007,Alveolar soft part sarcoma (disorder),y,descendant of concept mapped from leaf +369532009,Malignant tumor involving right ovary by direct extension from fallopian tube (disorder),y,descendant of concept mapped from leaf +94619004,Secondary malignant neoplasm of talus (disorder),y,descendant of concept mapped from leaf +369472002,Malignant tumor involving bladder by direct extension from prostate (disorder),y,descendant of concept mapped from leaf +706970001,Triple negative malignant neoplasm of breast (disorder),y,descendant of concept mapped from leaf +92675002,Carcinoma in situ of parathyroid gland (disorder),y,descendant of concept mapped from leaf +354641000119104,Primary malignant neoplasm of bone of left upper limb (disorder),y,descendant of concept mapped from leaf +93836001,Primary malignant neoplasm of inner aspect of lower lip (disorder),y,descendant of concept mapped from leaf +404055006,Spindle cell rhabdomyosarcoma (disorder),y,descendant of concept mapped from leaf +93891008,Primary malignant neoplasm of mediastinum (disorder),y,descendant of concept mapped from leaf +118608000,"Hodgkin's disease, nodular sclerosis (disorder)",y,descendant of concept mapped from leaf +721549006,Primary adenocarcinoma of lacrimal apparatus (disorder),y,descendant of concept mapped from leaf +681721000119103,Primary adenocarcinoma of head of pancreas (disorder),y,descendant of concept mapped from leaf +94529003,Secondary malignant neoplasm of scapula (disorder),y,descendant of concept mapped from leaf +733353006,Primary malignant neuroendocrine neoplasm of biliary tract (disorder),y,descendant of concept mapped from leaf +369455009,Malignant tumor involving rectum by separate metastasis from endometrium (disorder),y,descendant of concept mapped from leaf +713646001,Malignant germ cell tumor of testis (disorder),y,descendant of concept mapped from leaf +188565002,"Hodgkin's disease, nodular sclerosis of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +448215006,Malignant epithelial neoplasm of renal pelvis (disorder),y,descendant of concept mapped from leaf +94056007,Primary malignant neoplasm of soft tissues of inguinal region (disorder),y,descendant of concept mapped from leaf +473419009,Intraductal papillary mucinous carcinoma in situ of pancreas (disorder),y,descendant of concept mapped from leaf +93993007,Primary malignant neoplasm of upper lobe of right lung (disorder),y,descendant of concept mapped from leaf +1079151000119109,Primary basal cell carcinoma of right upper limb (disorder),y,descendant of concept mapped from leaf +403711001,Psoralen and long-wave ultraviolet radiation therapy-associated skin malignancy (disorder),y,descendant of concept mapped from leaf +10749871000119100,Malignant neoplastic disease in pregnancy (disorder),y,descendant of concept mapped from leaf +722543005,Primary malignant melanoma of anal canal (disorder),y,descendant of concept mapped from leaf +62497000,Stewart-Treves syndrome (disorder),y,descendant of concept mapped from leaf +232075002,Lymphoma of retina (disorder),y,descendant of concept mapped from leaf +405943005,Botryoid sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +448387008,Non-Hodgkin's lymphoma of testis (disorder),y,descendant of concept mapped from leaf +128749008,Spindle cell rhabdomyosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +189509003,"Refractory anemia without sideroblasts, so stated (disorder)",y,descendant of concept mapped from leaf +94537006,Secondary malignant neoplasm of shoulder (disorder),y,descendant of concept mapped from leaf +707464006,Primary myoepithelial carcinoma of lung (disorder),y,descendant of concept mapped from leaf +80914001,Anaplasia of cervix (disorder),y,descendant of concept mapped from leaf +847631000000107,Follicular lymphoma grade 2 (disorder),y,descendant of concept mapped from leaf +721669006,Primary adenocarcinoma of overlapping lesion of small intestine (disorder),y,descendant of concept mapped from leaf +302855005,Subacute leukemia (disorder),y,descendant of concept mapped from leaf +404130002,CD-30 negative pleomorphic large T-cell cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +733349009,Primary mucinous cystic neoplasm with associated invasive carcinoma of distal bile duct (disorder),y,descendant of concept mapped from leaf +93964007,Primary malignant neoplasm of pituitary gland (disorder),y,descendant of concept mapped from leaf +94210005,Secondary malignant neoplasm of blood vessel of upper limb (disorder),y,descendant of concept mapped from leaf +94058008,Primary malignant neoplasm of soft tissues of neck (disorder),y,descendant of concept mapped from leaf +371970002,Primary malignant neoplasm of biliary tract (disorder),y,descendant of concept mapped from leaf +716274007,Nodular basal cell carcinoma of skin (disorder),y,descendant of concept mapped from leaf +94622002,Secondary malignant neoplasm of temporal lobe (disorder),y,descendant of concept mapped from leaf +94039004,Primary malignant neoplasm of skin of shoulder (disorder),y,descendant of concept mapped from leaf +313249007,Malignant neoplasm of upper eyelid (disorder),y,descendant of concept mapped from leaf +93696001,Primary malignant neoplasm of blood vessel of foot (disorder),y,descendant of concept mapped from leaf +1079091000119100,Primary basal cell carcinoma of left upper limb (disorder),y,descendant of concept mapped from leaf +721700001,Primary malignant neuroendocrine neoplasm of rectum (disorder),y,descendant of concept mapped from leaf +448449001,Sarcoma of female breast (disorder),y,descendant of concept mapped from leaf +1691000119104,Metastasis to liver from adenocarcinoma (disorder),y,descendant of concept mapped from leaf +128771003,Intraosseous well differentiated osteosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +733343005,Primary squamous cell carcinoma of oral cavity (disorder),y,descendant of concept mapped from leaf +94712003,Mycosis fungoides of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +10708511000119108,Primary malignant neoplasm of uterus (disorder),y,descendant of concept mapped from leaf +94498001,Secondary malignant neoplasm of posterior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +403950007,Moll's gland adenocarcinoma (disorder),y,descendant of concept mapped from leaf +707425008,Primary adenoid squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +307634003,"Hodgkin's disease, lymphocytic depletion, reticular type (disorder)",y,descendant of concept mapped from leaf +94310008,Secondary malignant neoplasm of frontal sinus (disorder),y,descendant of concept mapped from leaf +414553000,Kappa light chain myeloma (disorder),y,descendant of concept mapped from leaf +418529003,Secondary malignant neoplasm of lacrimal drainage structure (disorder),y,descendant of concept mapped from leaf +733134009,Primary squamous cell carcinoma of paraurethral gland (disorder),y,descendant of concept mapped from leaf +269616004,Secondary nodes - axilla/arm (disorder),y,descendant of concept mapped from leaf +188754005,Megakaryocytic leukemia (disorder),y,descendant of concept mapped from leaf +734038002,Intrapulmonary thymoma (morphologic abnormality),y,descendant of concept mapped from leaf +94071006,Primary malignant neoplasm of spleen (disorder),y,descendant of concept mapped from leaf +449269003,Sarcoma of rib (disorder),y,descendant of concept mapped from leaf +118601006,Non-Hodgkin's lymphoma (disorder),y,descendant of concept mapped from leaf +128884000,Malignant myoepithelioma (morphologic abnormality),y,descendant of concept mapped from leaf +707539005,Primary adenoid cystic carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +93778001,Primary malignant neoplasm of endocardium (disorder),y,descendant of concept mapped from leaf +94470004,Secondary malignant neoplasm of parietal bone (disorder),y,descendant of concept mapped from leaf +422886007,Olfactory neuroblastoma (disorder),y,descendant of concept mapped from leaf +404133000,Subcutaneous panniculitic cutaneous T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +93650009,Malignant melanoma of skin of toe (disorder),y,descendant of concept mapped from leaf +91061000119100,Primary chondrosarcoma of bone of pelvis (disorder),y,descendant of concept mapped from leaf +724537009,Primary adenocarcinoma of jejunum (disorder),y,descendant of concept mapped from leaf +94456004,Secondary malignant neoplasm of palate (disorder),y,descendant of concept mapped from leaf +403892001,Squamous cell carcinoma of skin of face (disorder),y,descendant of concept mapped from leaf +93983000,Primary malignant neoplasm of rectovesical septum (disorder),y,descendant of concept mapped from leaf +703595002,Medullary-like carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +721696009,Primary adenocarcinoma of transverse colon (disorder),y,descendant of concept mapped from leaf +94184004,Secondary malignant neoplasm of base of tongue (disorder),y,descendant of concept mapped from leaf +722112006,Primary squamous cell carcinoma of ear (disorder),y,descendant of concept mapped from leaf +94125001,Primary malignant neoplasm of urinary system (disorder),y,descendant of concept mapped from leaf +707483004,Primary undifferentiated carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +123845008,Adenocarcinoma of endometrium (disorder),y,descendant of concept mapped from leaf +733608000,Papillary renal cell carcinoma (disorder),y,descendant of concept mapped from leaf +721670007,Primary malignant neuroendocrine neoplasm of small intestine (disorder),y,descendant of concept mapped from leaf +94660006,Secondary malignant neoplasm of ureteric orifice of urinary bladder (disorder),y,descendant of concept mapped from leaf +93754006,Primary malignant neoplasm of chest wall (disorder),y,descendant of concept mapped from leaf +93932000,Primary malignant neoplasm of orbit (disorder),y,descendant of concept mapped from leaf +94443006,Secondary malignant neoplasm of nipple of female breast (disorder),y,descendant of concept mapped from leaf +448711001,Sarcoma of back (disorder),y,descendant of concept mapped from leaf +448468003,Diffuse non-Hodgkin's lymphoma of oral cavity (disorder),y,descendant of concept mapped from leaf +94229004,Secondary malignant neoplasm of bronchus of left upper lobe (disorder),y,descendant of concept mapped from leaf +92509003,Burkitt's tumor of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +94520004,Secondary malignant neoplasm of retropharyngeal lymph nodes (disorder),y,descendant of concept mapped from leaf +109349007,Overlapping malignant neoplasm of soft tissues (disorder),y,descendant of concept mapped from leaf +93760006,Primary malignant neoplasm of coccyx (disorder),y,descendant of concept mapped from leaf +94072004,Primary malignant neoplasm of splenic flexure of colon (disorder),y,descendant of concept mapped from leaf +351461000119100,Merkel cell carcinoma of right lower limb (disorder),y,descendant of concept mapped from leaf +721579004,Primary synovial sarcoma of soft tissue of limb (disorder),y,descendant of concept mapped from leaf +722674001,Primary squamous cell carcinoma of parotid gland (disorder),y,descendant of concept mapped from leaf +764952009,Carcinosarcoma of corpus uteri (disorder),y,descendant of concept mapped from leaf +372013007,Primary malignant neoplasm of spermatic cord (disorder),y,descendant of concept mapped from leaf +93207008,Malignant mast cell tumor of spleen (disorder),y,descendant of concept mapped from leaf +94267001,Secondary malignant neoplasm of craniopharyngeal duct (disorder),y,descendant of concept mapped from leaf +93743001,Primary malignant neoplasm of cauda equina (disorder),y,descendant of concept mapped from leaf +722510006,Primary rhabdomyosarcoma of pharynx (disorder),y,descendant of concept mapped from leaf +94361003,Secondary malignant neoplasm of labia majora (disorder),y,descendant of concept mapped from leaf +93542008,"Hodgkin's paragranuloma of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +429114002,Malignant basal cell neoplasm of skin (disorder),y,descendant of concept mapped from leaf +63211008,Synovial sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +277612005,"Hodgkin's disease, nodular sclerosis - lymphocytic depletion (disorder)",y,descendant of concept mapped from leaf +94657004,Secondary malignant neoplasm of upper third of esophagus (disorder),y,descendant of concept mapped from leaf +94111002,Primary malignant neoplasm of trunk (disorder),y,descendant of concept mapped from leaf +188567005,"Hodgkin's disease, nodular sclerosis of intra-abdominal lymph nodes (disorder)",y,descendant of concept mapped from leaf +444597005,Extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue of stomach (disorder),y,descendant of concept mapped from leaf +723849009,Primary osteosarcoma of articular cartilage of jaw (disorder),y,descendant of concept mapped from leaf +369560006,Malignant tumor involving left ovary by separate metastasis from endometrium (disorder),y,descendant of concept mapped from leaf +369549002,Malignant tumor involving right fallopian tube by direct extension from ovary (disorder),y,descendant of concept mapped from leaf +404127009,CD-30 positive T-immunoblastic cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +369603003,Malignant tumor involving an organ by separate metastasis from endometrium (disorder),y,descendant of concept mapped from leaf +109390005,Kaposi's sarcoma of lung (disorder),y,descendant of concept mapped from leaf +425066001,"Carcinoma of urinary bladder, invasive (disorder)",y,descendant of concept mapped from leaf +188609000,"Nodular lymphoma of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +188613007,Nodular lymphoma of lymph nodes of inguinal region and lower limb (disorder),y,descendant of concept mapped from leaf +277569004,Large granular lymphocytic leukemia (disorder),y,descendant of concept mapped from leaf +448558006,Malignant neoplasm of maxillofacial bone (disorder),y,descendant of concept mapped from leaf +698288007,Malignant melanoma of maxillary sinus (disorder),y,descendant of concept mapped from leaf +109840002,Primary malignant neoplasm of cloacogenic zone (disorder),y,descendant of concept mapped from leaf +722676004,Primary squamous cell carcinoma of middle ear (disorder),y,descendant of concept mapped from leaf +372125008,Carcinoma of skin of lower limb (disorder),y,descendant of concept mapped from leaf +399399005,Spermatocytic seminoma with sarcomatous component (morphologic abnormality),y,descendant of concept mapped from leaf +70910003,Indolent systemic mastocytosis (disorder),y,descendant of concept mapped from leaf +94167005,Secondary malignant neoplasm of anterior mediastinum (disorder),y,descendant of concept mapped from leaf +94384005,Secondary malignant neoplasm of lower gum (disorder),y,descendant of concept mapped from leaf +404014008,Malignant fibrous histiocytoma of skin (disorder),y,descendant of concept mapped from leaf +188500005,"Lymphosarcoma of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +93779009,Primary malignant neoplasm of endocervix (disorder),y,descendant of concept mapped from leaf +94666000,Secondary malignant neoplasm of uveal tract (disorder),y,descendant of concept mapped from leaf +372110008,"Primary malignant neoplasm of lower lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +61291000119103,Disorder of central nervous system co-occurrent and due to acute lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +440422002,Asymptomatic multiple myeloma (disorder),y,descendant of concept mapped from leaf +721606002,Primary adenocarcinoma of overlapping lesion of accessory sinuses (disorder),y,descendant of concept mapped from leaf +404106004,Lymphomatoid papulosis with Hodgkin's disease (disorder),y,descendant of concept mapped from leaf +277611003,"Hodgkin's disease, nodular sclerosis - mixed cellularity (disorder)",y,descendant of concept mapped from leaf +128874001,Cutaneous CD30+ lymphoproliferative disorder (disorder),y,descendant of concept mapped from leaf +94570001,Secondary malignant neoplasm of skin of scalp (disorder),y,descendant of concept mapped from leaf +93146001,Leukemic reticuloendotheliosis of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +369477008,Malignant tumor involving bladder by separate metastasis from fallopian tube (disorder),y,descendant of concept mapped from leaf +717916003,Neuroendocrine carcinoma of appendix (disorder),y,descendant of concept mapped from leaf +94263002,Secondary malignant neoplasm of conjunctiva (disorder),y,descendant of concept mapped from leaf +369535006,Secondary neoplasm of left broad ligament (disorder),y,descendant of concept mapped from leaf +363499005,Malignant tumor of spleen (disorder),y,descendant of concept mapped from leaf +447806008,Lymphoma of cardia of stomach (disorder),y,descendant of concept mapped from leaf +404132005,Pleomorphic small/medium-sized cell cutaneous T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +724649000,Langerhans cell sarcoma (disorder),y,descendant of concept mapped from leaf +399552004,"Monodermal teratoma, primitive neuroectodermal tumor (morphologic abnormality)",y,descendant of concept mapped from leaf +36741007,"Seminoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,descendant of concept mapped from leaf +369562003,Malignant tumor involving left ovary by separate metastasis from right ovary (disorder),y,descendant of concept mapped from leaf +424487008,Malignant melanoma of skin of upper lip (disorder),y,descendant of concept mapped from leaf +721540005,Primary adnexal carcinoma of skin (disorder),y,descendant of concept mapped from leaf +93802007,Primary malignant neoplasm of floor of mouth (disorder),y,descendant of concept mapped from leaf +94560003,Secondary malignant neoplasm of skin of hand (disorder),y,descendant of concept mapped from leaf +449248000,Nasopharyngeal carcinoma (disorder),y,descendant of concept mapped from leaf +399590005,Squamous cell carcinoma of prostate (disorder),y,descendant of concept mapped from leaf +443439001,Malignant fibrous histiocytoma (disorder),y,descendant of concept mapped from leaf +94286009,Secondary malignant neoplasm of esophagus (disorder),y,descendant of concept mapped from leaf +424132000,"Non-small cell carcinoma of lung, TNM stage 1 (disorder)",y,descendant of concept mapped from leaf +441535001,Adenocarcinoma of head and neck (disorder),y,descendant of concept mapped from leaf +278052009,Malignant lymphoma of breast (disorder),y,descendant of concept mapped from leaf +94218003,Secondary malignant neoplasm of bone of face (disorder),y,descendant of concept mapped from leaf +242862004,Secondary malignant neoplasm of nasopharyngeal wall (disorder),y,descendant of concept mapped from leaf +414785000,Multiple solitary plasmacytomas (disorder),y,descendant of concept mapped from leaf +93831006,Primary malignant neoplasm of hypopharynx (disorder),y,descendant of concept mapped from leaf +707451005,Primary adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +93184007,Malignant histiocytosis of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +716859000,Hereditary diffuse carcinoma of stomach (disorder),y,descendant of concept mapped from leaf +93930008,Primary malignant neoplasm of olfactory nerve (disorder),y,descendant of concept mapped from leaf +95193005,Nodular lymphoma of spleen (disorder),y,descendant of concept mapped from leaf +94677006,Secondary malignant neoplasm of vestibule of nose (disorder),y,descendant of concept mapped from leaf +188492005,Reticulosarcoma of lymph nodes of axilla and upper limb (disorder),y,descendant of concept mapped from leaf +94669007,Secondary malignant neoplasm of vagus nerve (disorder),y,descendant of concept mapped from leaf +94608002,Secondary malignant neoplasm of sublingual gland (disorder),y,descendant of concept mapped from leaf +93654000,Malignant melanoma of skin of wrist (disorder),y,descendant of concept mapped from leaf +403896003,Squamous cell carcinoma of hand (disorder),y,descendant of concept mapped from leaf +402538000,Recurrent basal cell carcinoma (disorder),y,descendant of concept mapped from leaf +188718006,"Malignant plasma cell neoplasm, extramedullary plasmacytoma (disorder)",y,descendant of concept mapped from leaf +94495003,Secondary malignant neoplasm of postcricoid region (disorder),y,descendant of concept mapped from leaf +1081551000119106,Recurrent primary malignant neoplasm of left female breast (disorder),y,descendant of concept mapped from leaf +424954002,Undifferentiated large cell carcinomatosis (disorder),y,descendant of concept mapped from leaf +285422003,Immunoglobulin D myeloma (disorder),y,descendant of concept mapped from leaf +698042007,Malignant melanoma of tongue (disorder),y,descendant of concept mapped from leaf +188645002,"Leukemic reticuloendotheliosis of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +93773005,Primary malignant neoplasm of dorsal surface of tongue (disorder),y,descendant of concept mapped from leaf +403939009,Eccrine ductal carcinoma of skin (disorder),y,descendant of concept mapped from leaf +92813000,Chronic lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +423746001,Adenocarcinoma of pelvis (disorder),y,descendant of concept mapped from leaf +94203004,Secondary malignant neoplasm of blood vessel of perineum (disorder),y,descendant of concept mapped from leaf +94173006,Secondary malignant neoplasm of aortic body (disorder),y,descendant of concept mapped from leaf +94287000,Secondary malignant neoplasm of ethmoid bone (disorder),y,descendant of concept mapped from leaf +715950008,Anaplastic lymphoma kinase positive large B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +763771009,Leiomyosarcoma of cervix uteri (disorder),y,descendant of concept mapped from leaf +447781009,Malignant epithelial neoplasm of peritoneum (disorder),y,descendant of concept mapped from leaf +716588005,Primary non-gestational choriocarcinoma of ovary (disorder),y,descendant of concept mapped from leaf +716648006,Embryonal sarcoma of liver (disorder),y,descendant of concept mapped from leaf +734087000,Embryonal neoplasm with multilayered rosettes with C19MC-altered (morphologic abnormality),y,descendant of concept mapped from leaf +93707007,Primary malignant neoplasm of blood vessel of popliteal space (disorder),y,descendant of concept mapped from leaf +713189001,Malignant insulinoma (disorder),y,descendant of concept mapped from leaf +94303002,Secondary malignant neoplasm of flank (disorder),y,descendant of concept mapped from leaf +702476004,Therapy-related myelodysplastic syndrome (disorder),y,descendant of concept mapped from leaf +403926005,Malignant melanoma of oral cavity (disorder),y,descendant of concept mapped from leaf +733471003,Chromophobe renal cell carcinoma (disorder),y,descendant of concept mapped from leaf +443937008,Mixed glioma (disorder),y,descendant of concept mapped from leaf +313356004,Squamous cell carcinoma of bronchus in right middle lobe (disorder),y,descendant of concept mapped from leaf +93980002,Primary malignant neoplasm of rectosigmoid junction (disorder),y,descendant of concept mapped from leaf +722445001,Primary giant cell sarcoma of peritoneum (disorder),y,descendant of concept mapped from leaf +188612002,Nodular lymphoma of lymph nodes of axilla and upper limb (disorder),y,descendant of concept mapped from leaf +721701002,Primary neuroendocrine carcinoma of rectum (disorder),y,descendant of concept mapped from leaf +1091921000000103,B-cell non-Hodgkin's lymphoma (disorder),y,descendant of concept mapped from leaf +93978008,Primary malignant neoplasm of pyriform sinus (disorder),y,descendant of concept mapped from leaf +707460002,Primary pseudosarcomatous carcinoma of lung (disorder),y,descendant of concept mapped from leaf +709285002,Secondary malignant neoplasm of lumbosacral plexus (disorder),y,descendant of concept mapped from leaf +254628007,Carcinoma of lung parenchyma (disorder),y,descendant of concept mapped from leaf +94682004,Secondary malignant neoplasm of Waldeyer's ring (disorder),y,descendant of concept mapped from leaf +403978008,Kaposi's sarcoma - sporadic (disorder),y,descendant of concept mapped from leaf +715664005,Interdigitating dendritic cell sarcoma (disorder),y,descendant of concept mapped from leaf +93934004,Primary malignant neoplasm of ovary (disorder),y,descendant of concept mapped from leaf +93753000,Primary malignant neoplasm of cheek (disorder),y,descendant of concept mapped from leaf +231835006,Kaposi's sarcoma of eyelid (disorder),y,descendant of concept mapped from leaf +369543001,Malignant tumor involving left fallopian tube by separate metastasis from ovary (disorder),y,descendant of concept mapped from leaf +109854005,Malignant mesothelioma of parietal peritoneum (disorder),y,descendant of concept mapped from leaf +94312000,Secondary malignant neoplasm of gallbladder (disorder),y,descendant of concept mapped from leaf +764694005,MiT family translocation renal cell carcinoma (disorder),y,descendant of concept mapped from leaf +698040004,Malignant melanoma of nasal cavity (disorder),y,descendant of concept mapped from leaf +94383004,Secondary malignant neoplasm of long bone of upper limb (disorder),y,descendant of concept mapped from leaf +403902008,Adenosquamous carcinoma (disorder),y,descendant of concept mapped from leaf +724468006,Primary urothelial carcinoma of overlapping lesion of urinary organ (disorder),y,descendant of concept mapped from leaf +369498008,Malignant tumor involving uterine cervix by direct extension from ovary (disorder),y,descendant of concept mapped from leaf +423610004,Rhabdomyosarcoma of connective or soft tissue (disorder),y,descendant of concept mapped from leaf +402534003,Basal cell carcinoma with signet ring change (disorder),y,descendant of concept mapped from leaf +94215000,Secondary malignant neoplasm of body of uterus (disorder),y,descendant of concept mapped from leaf +94170009,Secondary malignant neoplasm of anterior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +723879002,Primary adenocarcinoma of overlapping lesion of urinary organ (disorder),y,descendant of concept mapped from leaf +707537007,Primary squamous cell carcinoma of anterior surface of epiglottis (disorder),y,descendant of concept mapped from leaf +766978002,Squamous cell carcinoma of gallbladder and extrahepatic biliary tract (disorder),y,descendant of concept mapped from leaf +399644007,"Neurotropic melanoma, malignant (morphologic abnormality)",y,descendant of concept mapped from leaf +402506005,Basal cell carcinoma of lower lip (disorder),y,descendant of concept mapped from leaf +721642005,Primary neuroendocrine carcinoma of overlapping lesion of stomach (disorder),y,descendant of concept mapped from leaf +93745008,Primary malignant neoplasm of central portion of female breast (disorder),y,descendant of concept mapped from leaf +94572009,Secondary malignant neoplasm of skin of temporal region (disorder),y,descendant of concept mapped from leaf +94368009,Secondary malignant neoplasm of laryngeal commissure (disorder),y,descendant of concept mapped from leaf +703692009,Secondary osteosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +94269003,Secondary malignant neoplasm of cuboid (disorder),y,descendant of concept mapped from leaf +95194004,Nodular lymphoma of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +707529004,Overlapping squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +82501000119102,Anaplastic astrocytoma of central nervous system (disorder),y,descendant of concept mapped from leaf +94334003,Secondary malignant neoplasm of hypopharynx (disorder),y,descendant of concept mapped from leaf +399968001,Adenoid cystic eccrine carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +93801000,Primary malignant neoplasm of flank (disorder),y,descendant of concept mapped from leaf +423896007,Squamous cell carcinoma of tip of nose (disorder),y,descendant of concept mapped from leaf +46585005,"Granulosa cell tumor, adult type (morphologic abnormality)",y,descendant of concept mapped from leaf +372127000,Carcinoma of skin of trunk (disorder),y,descendant of concept mapped from leaf +443261008,Oxyphilic adenocarcinoma (disorder),y,descendant of concept mapped from leaf +95261008,Sézary's disease of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +276811008,Gastric lymphoma (disorder),y,descendant of concept mapped from leaf +95225003,Reticulosarcoma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +707454002,Primary basaloid squamous cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +766980008,Squamous cell carcinoma of stomach (disorder),y,descendant of concept mapped from leaf +93497000,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +91855006,"Acute leukemia, disease (disorder)",y,descendant of concept mapped from leaf +425941003,Pre B-cell acute lymphoblastic leukemia in remission (disorder),y,descendant of concept mapped from leaf +707380002,Primary salivary gland type carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +94704006,Multiple myeloma in remission (disorder),y,descendant of concept mapped from leaf +94639000,Secondary malignant neoplasm of tonsillar fossa (disorder),y,descendant of concept mapped from leaf +1081811000119107,Primary seminoma of right testis (disorder),y,descendant of concept mapped from leaf +423673009,Malignant melanoma of retina (disorder),y,descendant of concept mapped from leaf +254637007,Non-small cell lung cancer (disorder),y,descendant of concept mapped from leaf +404103007,Lymphomatoid papulosis type A (CD-30 positive type) (disorder),y,descendant of concept mapped from leaf +24111000119105,Primary squamous cell carcinoma of upper limb (disorder),y,descendant of concept mapped from leaf +721561003,Primary adenocarcinoma of middle ear (disorder),y,descendant of concept mapped from leaf +94625000,Secondary malignant neoplasm of the mesocolon (disorder),y,descendant of concept mapped from leaf +448776002,Sarcoma of vertebra (disorder),y,descendant of concept mapped from leaf +110005000,"Acute myelomonocytic leukemia, FAB M4 (disorder)",y,descendant of concept mapped from leaf +399475009,Minimal deviation melanoma (morphologic abnormality),y,descendant of concept mapped from leaf +448669004,Malignant neoplasm of soft tissue of orbit (disorder),y,descendant of concept mapped from leaf +707429002,Overlapping squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +372129002,Carcinoma of skin of upper limb (disorder),y,descendant of concept mapped from leaf +94489004,Secondary malignant neoplasm of pineal gland (disorder),y,descendant of concept mapped from leaf +94465006,Secondary malignant neoplasm of parametrium (disorder),y,descendant of concept mapped from leaf +188662007,"Mast cell malignancy of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +94425007,Secondary malignant neoplasm of muscle of neck (disorder),y,descendant of concept mapped from leaf +399479003,"Malignant trophoblastic tumor, type cannot be determined (morphologic abnormality)",y,descendant of concept mapped from leaf +87151000119105,Malignant glioma of central nervous system (disorder),y,descendant of concept mapped from leaf +448672006,Follicular non-Hodgkin's lymphoma of lung (disorder),y,descendant of concept mapped from leaf +422599000,Squamous cell carcinoma of back (disorder),y,descendant of concept mapped from leaf +713327005,Malignant meningioma of meninges of brain (disorder),y,descendant of concept mapped from leaf +764961009,Hereditary clear cell renal cell carcinoma (disorder),y,descendant of concept mapped from leaf +94599006,Secondary malignant neoplasm of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +722712000,Occupational cancer of skin (disorder),y,descendant of concept mapped from leaf +707491008,Primary lymphoepithelial carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +402539008,Basal cell carcinoma recurrent following excision (disorder),y,descendant of concept mapped from leaf +94183005,Secondary malignant neoplasm of back (disorder),y,descendant of concept mapped from leaf +425178004,Adenocarcinoma of rectosigmoid junction (disorder),y,descendant of concept mapped from leaf +94089007,Primary malignant neoplasm of the mesocolon (disorder),y,descendant of concept mapped from leaf +87091000119101,Malignant glioma of cerebrum (disorder),y,descendant of concept mapped from leaf +444134008,Ductal carcinoma in situ with microinvasion and involving nipple skin (morphologic abnormality),y,descendant of concept mapped from leaf +723843005,Primary chondrosarcoma of bone of limb (disorder),y,descendant of concept mapped from leaf +285307007,Squamous cell carcinoma of skin of upper lip (disorder),y,descendant of concept mapped from leaf +94532000,Secondary malignant neoplasm of sebaceous gland (disorder),y,descendant of concept mapped from leaf +369475000,Malignant tumor involving bladder by direct extension from vagina (disorder),y,descendant of concept mapped from leaf +94346004,Secondary malignant neoplasm of intestinal tract (disorder),y,descendant of concept mapped from leaf +369567009,Malignant tumor involving right ovary by direct extension from vagina (disorder),y,descendant of concept mapped from leaf +734072005,Pulmonary myxoid sarcoma with EWSR1-CREB1 translocation (morphologic abnormality),y,descendant of concept mapped from leaf +403899005,Squamous cell carcinoma of skin of trunk (disorder),y,descendant of concept mapped from leaf +372136001,"Carcinoma of upper lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +403893006,Squamous cell carcinoma of forehead (disorder),y,descendant of concept mapped from leaf +404664002,Malignant optic glioma (disorder),y,descendant of concept mapped from leaf +400180002,Mucoepidermoid eccrine carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +403929003,Trichilemmal carcinoma (disorder),y,descendant of concept mapped from leaf +72891000119103,Kaposi sarcoma of viscus (disorder),y,descendant of concept mapped from leaf +707405009,Primary adenosquamous carcinoma of lung (disorder),y,descendant of concept mapped from leaf +721605003,Primary squamous cell carcinoma of overlapping lesion of accessory sinuses (disorder),y,descendant of concept mapped from leaf +369459003,Malignant tumor involving rectum by separate metastasis from uterine cervix (disorder),y,descendant of concept mapped from leaf +94662003,Secondary malignant neoplasm of urinary bladder neck (disorder),y,descendant of concept mapped from leaf +707359008,Primary squamous cell carcinoma of ethmoidal sinus (disorder),y,descendant of concept mapped from leaf +93744007,Primary malignant neoplasm of central nervous system (disorder),y,descendant of concept mapped from leaf +707390005,Primary basaloid squamous cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +94617002,Secondary malignant neoplasm of sweat gland (disorder),y,descendant of concept mapped from leaf +698285005,Malignant melanoma of ethmoid sinus (disorder),y,descendant of concept mapped from leaf +723847006,Primary chondrosarcoma of articular cartilage of rib (disorder),y,descendant of concept mapped from leaf +94616006,Secondary malignant neoplasm of supraglottis (disorder),y,descendant of concept mapped from leaf +93653006,Malignant melanoma of skin of upper limb (disorder),y,descendant of concept mapped from leaf +94005003,Primary malignant neoplasm of shoulder (disorder),y,descendant of concept mapped from leaf +443675005,Seminoma (disorder),y,descendant of concept mapped from leaf +94399005,Secondary malignant neoplasm of main bronchus (disorder),y,descendant of concept mapped from leaf +188544008,"Hodgkin's sarcoma of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +93987004,"Primary malignant neoplasm of retina, primary (disorder)",y,descendant of concept mapped from leaf +448509007,Transglottic malignant neoplasm of larynx (disorder),y,descendant of concept mapped from leaf +399884001,Primary malignant neoplasm of blood vessel of upper arm (disorder),y,descendant of concept mapped from leaf +415284008,Refractory anemia with excess blasts-2 (disorder),y,descendant of concept mapped from leaf +94352003,Secondary malignant neoplasm of intrathoracic organs (disorder),y,descendant of concept mapped from leaf +314975005,Local recurrence of malignant tumor of skin (disorder),y,descendant of concept mapped from leaf +278491007,Mixed seminoma teratoma of testis (disorder),y,descendant of concept mapped from leaf +369489005,Malignant tumor involving seminal vesicle by direct extension from bladder (disorder),y,descendant of concept mapped from leaf +188135003,Malignant neoplasm of skin of heel (disorder),y,descendant of concept mapped from leaf +188551004,Hodgkin's sarcoma of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +369571007,Malignant tumor involving right ovary by separate metastasis from uterine cervix (disorder),y,descendant of concept mapped from leaf +188133005,Malignant neoplasm of skin of lower leg (disorder),y,descendant of concept mapped from leaf +448435005,Sarcoma lower inner quadrant of female breast (disorder),y,descendant of concept mapped from leaf +440501006,Siewert type II adenocarcinoma of esophagogastric junction (disorder),y,descendant of concept mapped from leaf +400074007,Primary malignant neoplasm of blood vessel of lower leg (disorder),y,descendant of concept mapped from leaf +93699008,Primary malignant neoplasm of blood vessel of head (disorder),y,descendant of concept mapped from leaf +405822008,Squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +91860005,Acute myeloid leukemia in remission (disorder),y,descendant of concept mapped from leaf +448378004,Sarcoma of bone of foot (disorder),y,descendant of concept mapped from leaf +109967007,"Diffuse non-Hodgkin's lymphoma, small cleaved cell (disorder)",y,descendant of concept mapped from leaf +188515006,Burkitt's lymphoma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +285421005,Immunoglobulin G myeloma (disorder),y,descendant of concept mapped from leaf +277617004,High grade B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +423121009,"Non-small cell carcinoma of lung, TNM stage 4 (disorder)",y,descendant of concept mapped from leaf +707704007,Primary squamous cell carcinoma of pyriform sinus (disorder),y,descendant of concept mapped from leaf +95209008,Plasma cell leukemia in remission (disorder),y,descendant of concept mapped from leaf +698045009,Malignant melanoma of buccal mucosa (disorder),y,descendant of concept mapped from leaf +93190006,Malignant histiocytosis of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +254631008,Giant cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +425657001,Osteosclerotic myeloma (disorder),y,descendant of concept mapped from leaf +369576002,Malignant tumor involving uterine corpus by separate metastasis from ovary (disorder),y,descendant of concept mapped from leaf +94620005,Secondary malignant neoplasm of tarsal bone (disorder),y,descendant of concept mapped from leaf +698041000,Malignant melanoma of vestibule of mouth (disorder),y,descendant of concept mapped from leaf +447389009,Leiomyosarcoma of uterus (disorder),y,descendant of concept mapped from leaf +444911000,Acute myeloid leukemia with t(9:11)(p22;q23); MLLT3-MLL (disorder),y,descendant of concept mapped from leaf +369507007,Malignant tumor involving vulva by direct extension from endometrium (disorder),y,descendant of concept mapped from leaf +94585007,Secondary malignant neoplasm of soft tissues of face (disorder),y,descendant of concept mapped from leaf +188579005,"Hodgkin's disease, mixed cellularity of lymph nodes of inguinal region and lower limb (disorder)",y,descendant of concept mapped from leaf +722513008,Primary leiomyosarcoma of retroperitoneum (disorder),y,descendant of concept mapped from leaf +188665009,Mast cell malignancy of lymph nodes of axilla and upper limb (disorder),y,descendant of concept mapped from leaf +722229001,Primary sarcoma of retroperitoneum (disorder),y,descendant of concept mapped from leaf +370987005,Anaplastic astrocytoma of spinal cord (disorder),y,descendant of concept mapped from leaf +449063007,Follicular non-Hodgkin's lymphoma of oral cavity (disorder),y,descendant of concept mapped from leaf +359785002,Metastatic malignant neoplasm to dome of urinary bladder (disorder),y,descendant of concept mapped from leaf +354361000119107,Primary malignant neoplasm of right kidney (disorder),y,descendant of concept mapped from leaf +369577006,Malignant tumor involving uterine corpus by separate metastasis from uterine cervix (disorder),y,descendant of concept mapped from leaf +303055001,"Malignant lymphoma, follicular center cell (disorder)",y,descendant of concept mapped from leaf +369574004,Malignant tumor involving uterine cervix by separate metastasis from vagina (disorder),y,descendant of concept mapped from leaf +763409006,Rhabdomyosarcoma of corpus uteri (disorder),y,descendant of concept mapped from leaf +277664004,Malignant lymphoma of testis (disorder),y,descendant of concept mapped from leaf +449578008,Malignant neoplasm of alveolus of mandible (disorder),y,descendant of concept mapped from leaf +94268006,Secondary malignant neoplasm of cubital lymph nodes (disorder),y,descendant of concept mapped from leaf +1080261000119100,Infiltrating lobular carcinoma of left female breast (disorder),y,descendant of concept mapped from leaf +372137005,Primary malignant neoplasm of breast (disorder),y,descendant of concept mapped from leaf +369558009,Malignant tumor involving right fallopian tube by separate metastasis from vagina (disorder),y,descendant of concept mapped from leaf +93545005,Hodgkin's paragranuloma of spleen (disorder),y,descendant of concept mapped from leaf +369579009,Malignant tumor involving uterine corpus by direct extension from fallopian tube (disorder),y,descendant of concept mapped from leaf +721559007,Primary adenocarcinoma of common bile duct (disorder),y,descendant of concept mapped from leaf +188100000,Malignant neoplasm of skin of temple (disorder),y,descendant of concept mapped from leaf +721725005,Primary adenocarcinoma of peritoneum (disorder),y,descendant of concept mapped from leaf +94193003,Secondary malignant neoplasm of blood vessel of foot (disorder),y,descendant of concept mapped from leaf +448666006,Follicular non-Hodgkin's lymphoma of bone (disorder),y,descendant of concept mapped from leaf +371997009,Primary malignant neoplasm of lower gum (disorder),y,descendant of concept mapped from leaf +94077005,Primary malignant neoplasm of submaxillary gland (disorder),y,descendant of concept mapped from leaf +93991009,Primary malignant neoplasm of right lower lobe of lung (disorder),y,descendant of concept mapped from leaf +93670003,Primary malignant neoplasm of anterior aspect of epiglottis (disorder),y,descendant of concept mapped from leaf +448259002,Sarcoma of posterior mediastinum (disorder),y,descendant of concept mapped from leaf +93698000,Primary malignant neoplasm of blood vessel of hand (disorder),y,descendant of concept mapped from leaf +404135007,Angiocentric natural killer/T-cell malignant lymphoma involving skin (disorder),y,descendant of concept mapped from leaf +188568000,"Hodgkin's disease, nodular sclerosis of lymph nodes of axilla and upper limb (disorder)",y,descendant of concept mapped from leaf +94349006,Secondary malignant neoplasm of intrahepatic bile ducts (disorder),y,descendant of concept mapped from leaf +402527000,Basal cell carcinoma - infiltrative (disorder),y,descendant of concept mapped from leaf +400058002,Secondary malignant neoplasm of blood vessel of lower leg (disorder),y,descendant of concept mapped from leaf +705176003,Metastatic carcinoid tumor (disorder),y,descendant of concept mapped from leaf +95224004,Reticulosarcoma of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +413446001,Adenocarcinoma of cecum (disorder),y,descendant of concept mapped from leaf +399969009,Secondary malignant neoplasm of blood vessel of upper arm (disorder),y,descendant of concept mapped from leaf +254792006,Proliferating angioendotheliomatosis (disorder),y,descendant of concept mapped from leaf +93976007,Primary malignant neoplasm of pyloric antrum (disorder),y,descendant of concept mapped from leaf +147101000119108,Primary malignant astrocytoma of central nervous system (disorder),y,descendant of concept mapped from leaf +421918000,"Papillary carcinoma, diffuse follicular (morphologic abnormality)",y,descendant of concept mapped from leaf +448384001,Non-Hodgkin's lymphoma of nose (disorder),y,descendant of concept mapped from leaf +93695002,Primary malignant neoplasm of blood vessel of finger (disorder),y,descendant of concept mapped from leaf +307651005,Myelosclerosis with myeloid metaplasia (disorder),y,descendant of concept mapped from leaf +94419008,Secondary malignant neoplasm of muscle of buttock (disorder),y,descendant of concept mapped from leaf +254771006,Cutaneous leiomyosarcoma (disorder),y,descendant of concept mapped from leaf +403903003,Signet ring squamous cell carcinoma (disorder),y,descendant of concept mapped from leaf +188572001,"Hodgkin's disease, nodular sclerosis of lymph nodes of multiple sites (disorder)",y,descendant of concept mapped from leaf +253032007,Benign pheochromocytoma (disorder),y,descendant of concept mapped from leaf +277568007,Hairy cell leukemia variant (disorder),y,descendant of concept mapped from leaf +403911008,Nodulo-ulcerative basal cell carcinoma (disorder),y,descendant of concept mapped from leaf +721303001,Refractory neutropenia (disorder),y,descendant of concept mapped from leaf +724645006,T-cell hystiocyte rich large B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +128791005,Dysplastic gangliocytoma of cerebellum (Lhermitte-Duclos) (morphologic abnormality),y,descendant of concept mapped from leaf +707452003,Primary mucinous adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +94549007,Secondary malignant neoplasm of skin of ear (disorder),y,descendant of concept mapped from leaf +94098005,Primary malignant neoplasm of thyroid gland (disorder),y,descendant of concept mapped from leaf +708504008,Periosteal osteosarcoma of jaw (disorder),y,descendant of concept mapped from leaf +707400004,Primary mucinous adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +93729006,Primary malignant neoplasm of bronchus of left lower lobe (disorder),y,descendant of concept mapped from leaf +402508006,Basal cell carcinoma of chin (disorder),y,descendant of concept mapped from leaf +94474008,Secondary malignant neoplasm of parotid gland (disorder),y,descendant of concept mapped from leaf +715412008,Familial malignant neoplasm of prostate (disorder),y,descendant of concept mapped from leaf +721639004,Primary neuroendocrine carcinoma of cardia of stomach (disorder),y,descendant of concept mapped from leaf +277654008,Enteropathy-associated T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +448213004,Diffuse non-Hodgkin's lymphoma of prostate (disorder),y,descendant of concept mapped from leaf +93537000,Hodgkin's granuloma of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +94123008,Primary malignant neoplasm of urethra (disorder),y,descendant of concept mapped from leaf +403921000,Borderline malignant melanoma (disorder),y,descendant of concept mapped from leaf +94596004,Secondary malignant neoplasm of soft tissues of upper limb (disorder),y,descendant of concept mapped from leaf +369591000,Malignant tumor involving vulva by separate metastasis from uterine cervix (disorder),y,descendant of concept mapped from leaf +421283008,Primary lymphoma of brain associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +425048006,"Non-small cell carcinoma of lung, TNM stage 2 (disorder)",y,descendant of concept mapped from leaf +707410008,Primary solid carcinoma of lung (disorder),y,descendant of concept mapped from leaf +369483006,Malignant tumor involving vasa deferentia by direct extension from prostate (disorder),y,descendant of concept mapped from leaf +716659002,Squamous cell carcinoma of head and neck (disorder),y,descendant of concept mapped from leaf +447390000,Adenosarcoma of uterus (disorder),y,descendant of concept mapped from leaf +128900005,"Mucinous cystadenocarcinoma, non-invasive (morphologic abnormality)",y,descendant of concept mapped from leaf +369597001,Malignant tumor involving an organ by direct extension from ovary (disorder),y,descendant of concept mapped from leaf +707344002,Primary adenocarcinoma of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +402518001,Basal cell carcinoma of lower back (disorder),y,descendant of concept mapped from leaf +424938000,"Large cell carcinoma of lung, TNM stage 1 (disorder)",y,descendant of concept mapped from leaf +93515007,"Hodgkin's disease, nodular sclerosis of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +404104001,Lymphomatoid papulosis type B - mycosis fungoides-like (disorder),y,descendant of concept mapped from leaf +372121004,Carcinoma of ribs and/or sternum and/or clavicle (disorder),y,descendant of concept mapped from leaf +93746009,Primary malignant neoplasm of cerebellum (disorder),y,descendant of concept mapped from leaf +93220006,Malignant melanoma of skin of ear (disorder),y,descendant of concept mapped from leaf +369580007,Malignant tumor involving vagina by direct extension from uterine cervix (disorder),y,descendant of concept mapped from leaf +369530001,Secondary malignant neoplasm of right ovary (disorder),y,descendant of concept mapped from leaf +93890009,Primary malignant neoplasm of Meckel's diverticulum (disorder),y,descendant of concept mapped from leaf +20224008,Delta heavy chain disease (disorder),y,descendant of concept mapped from leaf +404110001,Hypomelanotic mycosis fungoides (disorder),y,descendant of concept mapped from leaf +369601001,Malignant tumor involving an organ by direct extension from vagina (disorder),y,descendant of concept mapped from leaf +737058005,Microsatellite instability-high colorectal cancer (disorder),y,descendant of concept mapped from leaf +398903003,Pleomorphic malignant fibrous histiocytoma of skin (disorder),y,descendant of concept mapped from leaf +713325002,Primary cerebral lymphoma co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +94496002,Secondary malignant neoplasm of posterior hypopharyngeal wall (disorder),y,descendant of concept mapped from leaf +448315008,Malignant epithelial neoplasm of anus (disorder),y,descendant of concept mapped from leaf +94406009,Secondary malignant neoplasm of maxillary sinus (disorder),y,descendant of concept mapped from leaf +92514004,Burkitt's tumor of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +683991000119103,Extensive stage primary small cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +93726004,Primary malignant neoplasm of brain stem (disorder),y,descendant of concept mapped from leaf +733354000,Primary adenocarcinoma of biliary tract (disorder),y,descendant of concept mapped from leaf +94440009,Secondary malignant neoplasm of scaphoid bone (disorder),y,descendant of concept mapped from leaf +721697000,Primary neuroendocrine carcinoma of colon (disorder),y,descendant of concept mapped from leaf +109951001,Overlapping malignant neoplasm of multiple endocrine glands (disorder),y,descendant of concept mapped from leaf +423807009,Primary leiomyosarcoma (disorder),y,descendant of concept mapped from leaf +109964000,"Diffuse non-Hodgkin's lymphoma, undifferentiated (disorder)",y,descendant of concept mapped from leaf +369561005,Malignant tumor involving left ovary by separate metastasis from fallopian tube (disorder),y,descendant of concept mapped from leaf +372000001,Primary malignant neoplasm of minor salivary gland (disorder),y,descendant of concept mapped from leaf +737310005,Primary squamous cell carcinoma of submandibular gland (disorder),y,descendant of concept mapped from leaf +448664009,Malignant epithelial neoplasm of small intestine (disorder),y,descendant of concept mapped from leaf +109977009,Peripheral T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +423615009,Adenoid cystic carcinoma of parotid gland (disorder),y,descendant of concept mapped from leaf +445238008,Malignant carcinoid tumor (disorder),y,descendant of concept mapped from leaf +307633009,"Hodgkin's disease, lymphocytic depletion, diffuse fibrosis (disorder)",y,descendant of concept mapped from leaf +369487007,Primary malignant neoplasm of seminal vesicle (disorder),y,descendant of concept mapped from leaf +369596005,Malignant tumor involving an organ by direct extension from fallopian tube (disorder),y,descendant of concept mapped from leaf +721635005,Primary malignant neuroendocrine neoplasm of cardia of stomach (disorder),y,descendant of concept mapped from leaf +815361000000107,Acute myeloid leukaemia with 11q23 abnormality (disorder),y,descendant of concept mapped from leaf +717735006,Renal cell carcinoma of kidney except renal pelvis (disorder),y,descendant of concept mapped from leaf +372019006,Primary malignant neoplasm of thoracic vertebral column (disorder),y,descendant of concept mapped from leaf +1090231000000103,Malignant neoplasm of respiratory tract (disorder),y,descendant of concept mapped from leaf +372119009,Primary malignant neoplasm of head of pancreas (disorder),y,descendant of concept mapped from leaf +13351431000119102,Secondary malignant neoplasm of lymph nodes of neck from thyroid (disorder),y,descendant of concept mapped from leaf +403918002,Basal cell carcinoma of glabella (disorder),y,descendant of concept mapped from leaf +449156009,Malignant epithelial neoplasm of floor of mouth (disorder),y,descendant of concept mapped from leaf +94332004,Secondary malignant neoplasm of hypopharyngeal aspect of aryepiglottic fold (disorder),y,descendant of concept mapped from leaf +94565008,Secondary malignant neoplasm of skin of lower limb (disorder),y,descendant of concept mapped from leaf +423600008,"Large cell carcinoma of lung, TNM stage 4 (disorder)",y,descendant of concept mapped from leaf +254710004,Basal cell carcinoma with eccrine differentiation (disorder),y,descendant of concept mapped from leaf +93196000,Malignant lymphoma of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +94171008,Secondary malignant neoplasm of anterior wall of urinary bladder (disorder),y,descendant of concept mapped from leaf +277653002,Peripheral T-cell lymphoma - pleomorphic medium and large cell (disorder),y,descendant of concept mapped from leaf +716855006,Theca steroid producing cell malignant neoplasm of ovary (disorder),y,descendant of concept mapped from leaf +707535004,Primary squamous cell carcinoma of lateral wall of oropharynx (disorder),y,descendant of concept mapped from leaf +427685000,Human epidermal growth factor 2 positive carcinoma of breast (disorder),y,descendant of concept mapped from leaf +733362008,Primary adenocarcinoma of paraurethral gland (disorder),y,descendant of concept mapped from leaf +723856003,Primary Ewing sarcoma of articular cartilage of rib (disorder),y,descendant of concept mapped from leaf +1082071000119102,Primary squamous cell carcinoma of left ear (disorder),y,descendant of concept mapped from leaf +93547002,Hodgkin's sarcoma of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +371962007,Primary malignant neoplasm of abdominal esophagus (disorder),y,descendant of concept mapped from leaf +398623004,Refractory anemia with excess blasts (disorder),y,descendant of concept mapped from leaf +403996004,Infantile fibrosarcoma (disorder),y,descendant of concept mapped from leaf +94118008,Primary malignant neoplasm of upper respiratory tract (disorder),y,descendant of concept mapped from leaf +764940002,Inherited acute myeloid leukemia (disorder),y,descendant of concept mapped from leaf +763477007,Primary lymphoma of conjunctiva (disorder),y,descendant of concept mapped from leaf +94518002,Secondary malignant neoplasm of retromolar area (disorder),y,descendant of concept mapped from leaf +402816008,Squamous cell carcinoma of anogenital area (disorder),y,descendant of concept mapped from leaf +15635721000119108,Primary malignant neoplasm of both ovaries (disorder),y,descendant of concept mapped from leaf +369518007,Malignant tumor involving left fallopian tube by direct extension from uterine cervix (disorder),y,descendant of concept mapped from leaf +402519009,Basal cell carcinoma of face (disorder),y,descendant of concept mapped from leaf +721310007,Aggressive natural killer-cell leukemia (disorder),y,descendant of concept mapped from leaf +94407000,Secondary malignant neoplasm of Meckel's diverticulum (disorder),y,descendant of concept mapped from leaf +403897007,Squamous cell carcinoma of upper extremity (disorder),y,descendant of concept mapped from leaf +733906003,Rosette-forming glioneuronal neoplasm (morphologic abnormality),y,descendant of concept mapped from leaf +94075002,Primary malignant neoplasm of subglottis (disorder),y,descendant of concept mapped from leaf +369486003,Malignant tumor involving prostate by separate metastasis from bladder (disorder),y,descendant of concept mapped from leaf +4135001,11p partial monosomy syndrome (disorder),y,descendant of concept mapped from leaf +766759009,Rhabdomyosarcoma of vulva and vagina (disorder),y,descendant of concept mapped from leaf +253046007,Malignant myomatous tumor (morphologic abnormality),y,descendant of concept mapped from leaf +313355000,Squamous cell carcinoma of bronchus in right lower lobe (disorder),y,descendant of concept mapped from leaf +433067002,Adamantinoma of femur (disorder),y,descendant of concept mapped from leaf +415177008,"Primary malignant neoplasm of ear, nose AND/OR throat (disorder)",y,descendant of concept mapped from leaf +369509005,Malignant tumor involving vulva by direct extension from ovary (disorder),y,descendant of concept mapped from leaf +710196003,Malignant odontogenic neoplasm of upper jaw (disorder),y,descendant of concept mapped from leaf +93551000,"Hodgkin's sarcoma of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +94094007,Primary malignant neoplasm of third cuneiform bone of foot (disorder),y,descendant of concept mapped from leaf +94002000,Primary malignant neoplasm of septum of nose (disorder),y,descendant of concept mapped from leaf +277589003,Atypical chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +94324007,Secondary malignant neoplasm of hard palate (disorder),y,descendant of concept mapped from leaf +423699002,Enchondroma (morphologic abnormality),y,descendant of concept mapped from leaf +93727008,Primary malignant neoplasm of brain (disorder),y,descendant of concept mapped from leaf +94265009,Secondary malignant neoplasm of cornea (disorder),y,descendant of concept mapped from leaf +93882009,Primary malignant neoplasm of main bronchus (disorder),y,descendant of concept mapped from leaf +369450004,Malignant tumor involving rectum by direct extension from ovary (disorder),y,descendant of concept mapped from leaf +446807009,Primary malignant neoplasm of perihilar bile duct (disorder),y,descendant of concept mapped from leaf +109982002,Alpha heavy chain disease (disorder),y,descendant of concept mapped from leaf +94672000,Secondary malignant neoplasm of ventral surface of tongue (disorder),y,descendant of concept mapped from leaf +315006004,Metastasis from malignant tumor of lung (disorder),y,descendant of concept mapped from leaf +369501008,Malignant tumor involving uterine cervix by separate metastasis from ovary (disorder),y,descendant of concept mapped from leaf +449054005,Malignant epithelial neoplasm of fundus of uterus (disorder),y,descendant of concept mapped from leaf +94709001,Mycosis fungoides of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +94370000,Secondary malignant neoplasm of larynx (disorder),y,descendant of concept mapped from leaf +403889000,Verrucous carcinoma of oral cavity (disorder),y,descendant of concept mapped from leaf +94719007,"Myeloid sarcoma, disease (disorder)",y,descendant of concept mapped from leaf +448299004,Malignant neoplasm of mastoid (disorder),y,descendant of concept mapped from leaf +94462009,Secondary malignant neoplasm of paraganglion (disorder),y,descendant of concept mapped from leaf +109855006,Malignant mesothelioma of pelvic peritoneum (disorder),y,descendant of concept mapped from leaf +93915004,Primary malignant neoplasm of myometrium (disorder),y,descendant of concept mapped from leaf +93844001,Primary malignant neoplasm of isthmus of uterus (disorder),y,descendant of concept mapped from leaf +93682007,Primary malignant neoplasm of upper arm (disorder),y,descendant of concept mapped from leaf +109939003,Primary malignant neoplasm of peripheral nerves of hip (disorder),y,descendant of concept mapped from leaf +404134006,Anaplastic large T-cell systemic malignant lymphoma (disorder),y,descendant of concept mapped from leaf +369466002,Malignant tumor involving urethra by direct extension from prostate (disorder),y,descendant of concept mapped from leaf +277549009,Chronic lymphocytic prolymphocytic leukemia syndrome (disorder),y,descendant of concept mapped from leaf +447707005,Leiomyosarcoma of cardia of stomach (disorder),y,descendant of concept mapped from leaf +94017001,Primary malignant neoplasm of skin of ear (disorder),y,descendant of concept mapped from leaf +403924008,Desmoplastic malignant melanoma (disorder),y,descendant of concept mapped from leaf +723301009,Squamous non-small cell lung cancer (disorder),y,descendant of concept mapped from leaf +109833003,"Overlapping malignant neoplasm of lip, oral cavity and/or pharynx (disorder)",y,descendant of concept mapped from leaf +94509004,Secondary malignant neoplasm of rectosigmoid junction (disorder),y,descendant of concept mapped from leaf +188531003,Hodgkin's paragranuloma of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +118611004,Sézary's disease (disorder),y,descendant of concept mapped from leaf +285420006,Immunoglobulin A myeloma (disorder),y,descendant of concept mapped from leaf +302848008,"Nodular malignant lymphoma, lymphocytic - intermediate differentiation (disorder)",y,descendant of concept mapped from leaf +397379005,Pineal parenchymal tumor of intermediate differentiation (morphologic abnormality),y,descendant of concept mapped from leaf +440527006,Primary squamous cell carcinoma of naris (disorder),y,descendant of concept mapped from leaf +94315003,Secondary malignant neoplasm of glans penis (disorder),y,descendant of concept mapped from leaf +128735004,Desmoplastic small round cell tumor (morphologic abnormality),y,descendant of concept mapped from leaf +764846009,Adenocarcinoma of penis (disorder),y,descendant of concept mapped from leaf +722527003,Primary malignant neuroendocrine neoplasm of bronchus (disorder),y,descendant of concept mapped from leaf +93789008,Primary malignant neoplasm of exocervix (disorder),y,descendant of concept mapped from leaf +254653005,Spindle cell squamous carcinoma of skin (disorder),y,descendant of concept mapped from leaf +402495002,Basal cell carcinoma of medial canthus (disorder),y,descendant of concept mapped from leaf +94129007,Primary malignant neoplasm of uvula (disorder),y,descendant of concept mapped from leaf +109389001,Kaposi's sarcoma of gastrointestinal tract (disorder),y,descendant of concept mapped from leaf +93694003,Primary malignant neoplasm of blood vessel of face (disorder),y,descendant of concept mapped from leaf +397355008,"Dendritic cell sarcoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,descendant of concept mapped from leaf +254820002,Follicular atrophoderma and basal cell epitheliomata (disorder),y,descendant of concept mapped from leaf +369548005,Malignant tumor involving right fallopian tube by direct extension from left fallopian tube (disorder),y,descendant of concept mapped from leaf +448931007,Squamous cell carcinoma of shoulder (disorder),y,descendant of concept mapped from leaf +448218008,Malignant neoplasm of cerebellopontine angle (disorder),y,descendant of concept mapped from leaf +707379000,Primary mucoepidermoid carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +408647009,Adenocarcinoma of stomach (disorder),y,descendant of concept mapped from leaf +94182000,Secondary malignant neoplasm of axillary tail of female breast (disorder),y,descendant of concept mapped from leaf +723845003,Primary chondrosarcoma of articular cartilage of pelvis (disorder),y,descendant of concept mapped from leaf +61493004,Mu heavy chain disease (disorder),y,descendant of concept mapped from leaf +93982005,Primary malignant neoplasm of rectovaginal septum (disorder),y,descendant of concept mapped from leaf +762690000,Classical Hodgkin lymphoma (disorder),y,descendant of concept mapped from leaf +699818003,T-cell large granular lymphocytic leukemia (disorder),y,descendant of concept mapped from leaf +188558005,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of axilla and upper limb (disorder)",y,descendant of concept mapped from leaf +449253005,Malignant epithelial neoplasm of hypothalamus (disorder),y,descendant of concept mapped from leaf +372133009,Primary malignant neoplasm of upper limb bones and scapula (disorder),y,descendant of concept mapped from leaf +420302007,Reticulosarcoma associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +766758001,Undifferentiated carcinoma of corpus uteri (disorder),y,descendant of concept mapped from leaf +18121000119104,Primary squamous cell carcinoma of palatine tonsil (disorder),y,descendant of concept mapped from leaf +721637002,Primary malignant neuroendocrine neoplasm of pyloric antrum of stomach (disorder),y,descendant of concept mapped from leaf +421414006,"Papillary carcinoma, macrofollicular (morphologic abnormality)",y,descendant of concept mapped from leaf +372120003,Carcinoma of main bronchus (disorder),y,descendant of concept mapped from leaf +360331008,Rhabdomyosarcoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +93140007,Letterer-Siwe disease of spleen (disorder),y,descendant of concept mapped from leaf +447011009,Mixed serous and mucinous cystadenocarcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +254654004,Acantholytic squamous cell carcinoma of skin (disorder),y,descendant of concept mapped from leaf +128753005,Stromal sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +93208003,Malignant mast cell tumor of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +94667009,Secondary malignant neoplasm of uvula (disorder),y,descendant of concept mapped from leaf +188746008,Subacute monocytic leukemia (disorder),y,descendant of concept mapped from leaf +118609008,"Hodgkin's disease, mixed cellularity (disorder)",y,descendant of concept mapped from leaf +371977004,Primary malignant neoplasm of cecum (disorder),y,descendant of concept mapped from leaf +414676007,Metastatic neuroblastoma of orbit proper (disorder),y,descendant of concept mapped from leaf +369481008,Malignant tumor involving bladder by separate metastasis from uterus (disorder),y,descendant of concept mapped from leaf +94648005,Secondary malignant neoplasm of trochlear nerve (disorder),y,descendant of concept mapped from leaf +707492001,Primary squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +400175006,Myxofibrosarcoma of skin (disorder),y,descendant of concept mapped from leaf +93710000,Primary malignant neoplasm of blood vessel of thorax (disorder),y,descendant of concept mapped from leaf +93804008,Primary malignant neoplasm of forearm (disorder),y,descendant of concept mapped from leaf +188099008,Malignant neoplasm of skin of nose (external) (disorder),y,descendant of concept mapped from leaf +449153001,Adenocarcinoma of lower esophagus (disorder),y,descendant of concept mapped from leaf +188536008,Hodgkin's granuloma of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +67831000119107,"Primary small cell malignant neoplasm of lung, TNM stage 3 (disorder)",y,descendant of concept mapped from leaf +94206007,Secondary malignant neoplasm of blood vessel of thigh (disorder),y,descendant of concept mapped from leaf +93883004,Primary malignant neoplasm of major salivary gland (disorder),y,descendant of concept mapped from leaf +1082221000119106,Primary squamous cell carcinoma of skin of right lower limb (disorder),y,descendant of concept mapped from leaf +372002009,Primary malignant neoplasm of palate (disorder),y,descendant of concept mapped from leaf +109923005,Primary malignant neoplasm of peripheral nerves of head (disorder),y,descendant of concept mapped from leaf +254625005,Malignant tumor of lung parenchyma (disorder),y,descendant of concept mapped from leaf +69408002,Gorlin syndrome (disorder),y,descendant of concept mapped from leaf +93871001,Primary malignant neoplasm of long bone of lower limb (disorder),y,descendant of concept mapped from leaf +352321000119107,Primary malignant neoplasm of soft tissue of left lower limb (disorder),y,descendant of concept mapped from leaf +94293008,Secondary malignant neoplasm of face (disorder),y,descendant of concept mapped from leaf +94241006,Secondary malignant neoplasm of cartilage of nose (disorder),y,descendant of concept mapped from leaf +94340005,Secondary malignant neoplasm of inguinal region (disorder),y,descendant of concept mapped from leaf +94231008,Secondary malignant neoplasm of bronchus of right middle lobe (disorder),y,descendant of concept mapped from leaf +277632006,Diffuse malignant lymphoma - centroblastic polymorphic (disorder),y,descendant of concept mapped from leaf +94386007,Secondary malignant neoplasm of lower limb (disorder),y,descendant of concept mapped from leaf +404119000,Pagetoid reticulosis (disorder),y,descendant of concept mapped from leaf +93202002,Malignant mast cell tumor of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +93885006,Primary malignant neoplasm of male genital organ (disorder),y,descendant of concept mapped from leaf +721640002,Primary neuroendocrine carcinoma of body of stomach (disorder),y,descendant of concept mapped from leaf +448738008,Non-Hodgkin's lymphoma of soft tissue (disorder),y,descendant of concept mapped from leaf +277474005,B-cell chronic lymphocytic leukemia variant (disorder),y,descendant of concept mapped from leaf +447783007,Sarcoma of peritoneum (disorder),y,descendant of concept mapped from leaf +93962006,Primary malignant neoplasm of pineal gland (disorder),y,descendant of concept mapped from leaf +733603009,Tubulocystic renal cell carcinoma (disorder),y,descendant of concept mapped from leaf +372065009,Malignant neoplasm of main bronchus (disorder),y,descendant of concept mapped from leaf +372130007,Malignant neoplasm of skin (disorder),y,descendant of concept mapped from leaf +1080241000119104,Infiltrating ductal carcinoma of upper outer quadrant of right female breast (disorder),y,descendant of concept mapped from leaf +449318001,Non-Hodgkin's lymphoma of prostate (disorder),y,descendant of concept mapped from leaf +93909004,Primary malignant neoplasm of muscle of shoulder (disorder),y,descendant of concept mapped from leaf +423425006,Malignant neoplasm of skin of eyelid (disorder),y,descendant of concept mapped from leaf +95210003,"Plasma cell leukemia, disease (disorder)",y,descendant of concept mapped from leaf +94014008,Primary malignant neoplasm of skin of cheek (disorder),y,descendant of concept mapped from leaf +423463003,Basal cell carcinoma of back (disorder),y,descendant of concept mapped from leaf +187857006,Malignant neoplasm of carina of bronchus (disorder),y,descendant of concept mapped from leaf +721636006,Primary malignant neuroendocrine neoplasm of body of stomach (disorder),y,descendant of concept mapped from leaf +404118008,Syringotropic mycosis fungoides (disorder),y,descendant of concept mapped from leaf +93733004,Primary malignant neoplasm of bronchus of right upper lobe (disorder),y,descendant of concept mapped from leaf +302815008,Malignant tumor of frenum of lip (disorder),y,descendant of concept mapped from leaf +93528000,Hodgkin's disease of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +93200005,Malignant mast cell tumor of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +427141003,Malignant lymphoma in remission (disorder),y,descendant of concept mapped from leaf +94067008,Primary malignant neoplasm of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +424970000,"Large cell carcinoma of lung, TNM stage 3 (disorder)",y,descendant of concept mapped from leaf +449108003,Philadelphia chromosome positive chronic myelogenous leukemia (disorder),y,descendant of concept mapped from leaf +99101000119101,Primary adenocarcinoma of fallopian tube (disorder),y,descendant of concept mapped from leaf +402561003,Malignant melanoma of soft tissues (disorder),y,descendant of concept mapped from leaf +449218003,Lymphoma of sigmoid colon (disorder),y,descendant of concept mapped from leaf +369448007,Malignant tumor involving rectum by direct extension from endometrium (disorder),y,descendant of concept mapped from leaf +93898002,Primary malignant neoplasm of multiple endocrine glands (disorder),y,descendant of concept mapped from leaf +302856006,Aleukemic leukemia (disorder),y,descendant of concept mapped from leaf +92528005,Carcinoma in situ of adrenal medulla (disorder),y,descendant of concept mapped from leaf +277609007,"Hodgkin's disease, lymphocytic predominance - diffuse (disorder)",y,descendant of concept mapped from leaf +702405001,Malignant granulosa cell tumor of testis (disorder),y,descendant of concept mapped from leaf +94636007,Secondary malignant neoplasm of tibial lymph nodes (disorder),y,descendant of concept mapped from leaf +404156009,Leukemic infiltration of skin (disorder),y,descendant of concept mapped from leaf +733355004,Primary adenocarcinoma of digestive organ (disorder),y,descendant of concept mapped from leaf +447705002,Malignant germ cell neoplasm of posterior mediastinum (disorder),y,descendant of concept mapped from leaf +373082000,Malignant neoplasm of breast upper inner quadrant (disorder),y,descendant of concept mapped from leaf +733163007,Primary malignant neuroendocrine neoplasm of anal canal (disorder),y,descendant of concept mapped from leaf +403927001,Malignant melanoma of nail apparatus (disorder),y,descendant of concept mapped from leaf +369553000,Malignant tumor involving right fallopian tube by separate metastasis from endometrium (disorder),y,descendant of concept mapped from leaf +734033006,Mixed epithelial-mesenchymal hepatoblastoma (morphologic abnormality),y,descendant of concept mapped from leaf +94045007,Primary malignant neoplasm of skin of upper limb (disorder),y,descendant of concept mapped from leaf +363493006,Malignant tumor of bronchus (disorder),y,descendant of concept mapped from leaf +369533004,Malignant tumor involving right ovary by direct extension from left ovary (disorder),y,descendant of concept mapped from leaf +707583001,Primary adenosquamous carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +128813000,Histiocytic sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +91131000119109,Primary adenocarcinoma of vulva (disorder),y,descendant of concept mapped from leaf +403943008,Malignant chondroid syringoma of skin (disorder),y,descendant of concept mapped from leaf +94497006,Secondary malignant neoplasm of posterior mediastinum (disorder),y,descendant of concept mapped from leaf +721672004,Primary mucinous adenocarcinoma of appendix (disorder),y,descendant of concept mapped from leaf +188517003,Burkitt's lymphoma of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +448712008,Sarcoma of femur (disorder),y,descendant of concept mapped from leaf +705145009,Metastatic osteosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +93141006,Letterer-Siwe disease of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +127225006,Chronic myelomonocytic leukemia (disorder),y,descendant of concept mapped from leaf +94029005,Primary malignant neoplasm of skin of hip (disorder),y,descendant of concept mapped from leaf +1091891000000106,B-cell Hodgkin's lymphoma (disorder),y,descendant of concept mapped from leaf +448229007,Leiomyosarcoma of lower esophagus (disorder),y,descendant of concept mapped from leaf +369568004,Malignant tumor involving right ovary by separate metastasis from endometrium (disorder),y,descendant of concept mapped from leaf +448354009,Non-Hodgkin's lymphoma of intestine (disorder),y,descendant of concept mapped from leaf +94536002,Secondary malignant neoplasm of short bone of upper limb (disorder),y,descendant of concept mapped from leaf +93189002,Malignant histiocytosis of spleen (disorder),y,descendant of concept mapped from leaf +93926005,Primary malignant neoplasm of nose (disorder),y,descendant of concept mapped from leaf +285309005,Squamous cell carcinoma of skin of cheek (disorder),y,descendant of concept mapped from leaf +403942003,Malignant eccrine spiradenoma of skin (disorder),y,descendant of concept mapped from leaf +399887008,"Signet ring carcinoma, primary cutaneous (morphologic abnormality)",y,descendant of concept mapped from leaf +93495008,"Hodgkin's disease, lymphocytic-histiocytic predominance of intrathoracic lymph nodes (disorder)",y,descendant of concept mapped from leaf +372128005,Malignant neoplasm of skin of upper limb (disorder),y,descendant of concept mapped from leaf +94201002,Secondary malignant neoplasm of blood vessel of neck (disorder),y,descendant of concept mapped from leaf +371999007,Primary malignant neoplasm of middle third of esophagus (disorder),y,descendant of concept mapped from leaf +707402007,Primary adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +1078881000119102,Primary adenocarcinoma of lower lobe of left lung (disorder),y,descendant of concept mapped from leaf +402499008,Basal cell carcinoma of lateral side wall of nose (disorder),y,descendant of concept mapped from leaf +307646004,"Malignant lymphoma, lymphocytic, poorly differentiated, nodular (disorder)",y,descendant of concept mapped from leaf +369515005,Malignant tumor involving left fallopian tube by direct extension from endometrium (disorder),y,descendant of concept mapped from leaf +94525009,Secondary malignant neoplasm of round ligament of uterus (disorder),y,descendant of concept mapped from leaf +95260009,"Sézary's disease of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +93226000,Malignant melanoma of skin of finger (disorder),y,descendant of concept mapped from leaf +404089007,Extrarenal rhabdoid tumor (disorder),y,descendant of concept mapped from leaf +402652009,Malignant vascular tumor of skin (disorder),y,descendant of concept mapped from leaf +94153001,Secondary malignant neoplasm of abducens nerve (disorder),y,descendant of concept mapped from leaf +707377003,Primary signet ring cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +116821000119104,Non-Hodgkin lymphoma of central nervous system metastatic to lymph node of upper limb (disorder),y,descendant of concept mapped from leaf +94356000,Secondary malignant neoplasm of jaw (disorder),y,descendant of concept mapped from leaf +721563000,Primary malignant melanoma of vagina (disorder),y,descendant of concept mapped from leaf +402559007,Congenital malignant melanoma (disorder),y,descendant of concept mapped from leaf +352071000119105,Merkel cell carcinoma of left lower limb (disorder),y,descendant of concept mapped from leaf +94237007,Secondary malignant neoplasm of cardia of stomach (disorder),y,descendant of concept mapped from leaf +707585008,Primary squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94116007,Primary malignant neoplasm of upper limb (disorder),y,descendant of concept mapped from leaf +372010005,Primary malignant neoplasm of soft tissues (disorder),y,descendant of concept mapped from leaf +707479004,Primary adenocarcinoma of subglottis (disorder),y,descendant of concept mapped from leaf +432328008,Neuroblastoma (disorder),y,descendant of concept mapped from leaf +402533009,Basal cell carcinoma with sebaceous differentiation (disorder),y,descendant of concept mapped from leaf +724866001,Primary malignant neoplasm of skin due to and following radiotherapy caused by ionizing radiation (disorder),y,descendant of concept mapped from leaf +713573006,Malignant carcinoid tumor of rectum (disorder),y,descendant of concept mapped from leaf +109988003,Histiocytic sarcoma (disorder),y,descendant of concept mapped from leaf +94468008,Secondary malignant neoplasm of paraurethral glands (disorder),y,descendant of concept mapped from leaf +369522002,Primary malignant neoplasm of left ovary (disorder),y,descendant of concept mapped from leaf +94207003,Secondary malignant neoplasm of blood vessel of thorax (disorder),y,descendant of concept mapped from leaf +722688002,Malignant epithelial neoplasm (disorder),y,descendant of concept mapped from leaf +93191005,Malignant lymphoma of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +94650002,Secondary malignant neoplasm of ulna (disorder),y,descendant of concept mapped from leaf +766247009,Primitive neuroectodermal tumor of corpus uteri (disorder),y,descendant of concept mapped from leaf +94569002,Secondary malignant neoplasm of skin of popliteal area (disorder),y,descendant of concept mapped from leaf +369529006,Primary malignant neoplasm of right ovary (disorder),y,descendant of concept mapped from leaf +369458006,Malignant tumor involving rectum by separate metastasis from prostate (disorder),y,descendant of concept mapped from leaf +277641001,Follicular malignant lymphoma - large cell (disorder),y,descendant of concept mapped from leaf +93192003,Malignant lymphoma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +721622001,Primary adenocarcinoma of upper third of esophagus (disorder),y,descendant of concept mapped from leaf +109962001,Diffuse non-Hodgkin's lymphoma (disorder),y,descendant of concept mapped from leaf +426370008,Subacute lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +93918002,Primary malignant neoplasm of nasal concha (disorder),y,descendant of concept mapped from leaf +722533007,Primary malignant neoplasm of esophagogastric junction (disorder),y,descendant of concept mapped from leaf +400173004,Eccrine carcinoma of skin (disorder),y,descendant of concept mapped from leaf +721634009,Primary malignant neuroendocrine neoplasm of stomach (disorder),y,descendant of concept mapped from leaf +762665002,Primary malignant neuroendocrine neoplasm of perihilar bile duct (disorder),y,descendant of concept mapped from leaf +93505001,"Hodgkin's disease, mixed cellularity of lymph nodes of axilla AND/OR upper limb (disorder)",y,descendant of concept mapped from leaf +234941000119100,Malignant glioma of eye (disorder),y,descendant of concept mapped from leaf +94658009,Secondary malignant neoplasm of urachus (disorder),y,descendant of concept mapped from leaf +94424006,Secondary malignant neoplasm of muscle of lower limb (disorder),y,descendant of concept mapped from leaf +707670009,Pleuropulmonary blastoma (disorder),y,descendant of concept mapped from leaf +94527001,Secondary malignant neoplasm of sacrum (disorder),y,descendant of concept mapped from leaf +94450005,Secondary malignant neoplasm of oculomotor nerve (disorder),y,descendant of concept mapped from leaf +449221001,Diffuse non-Hodgkin's lymphoma of central nervous system (disorder),y,descendant of concept mapped from leaf +764737005,Squamous cell carcinoma of corpus uteri (disorder),y,descendant of concept mapped from leaf +372112000,"Primary malignant neoplasm of middle lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +109834009,Primary malignant neoplasm of branchial cleft (disorder),y,descendant of concept mapped from leaf +93636004,Malignant melanoma of skin of hand (disorder),y,descendant of concept mapped from leaf +424302003,Malignant melanoma of skin of lower lip (disorder),y,descendant of concept mapped from leaf +93667002,Primary malignant neoplasm of alveolar ridge mucosa (disorder),y,descendant of concept mapped from leaf +421686008,"Follicular carcinoma, clear cell (morphologic abnormality)",y,descendant of concept mapped from leaf +369573005,Malignant tumor involving right ovary by separate metastasis from vagina (disorder),y,descendant of concept mapped from leaf +94464005,Secondary malignant neoplasm of parametrial lymph nodes (disorder),y,descendant of concept mapped from leaf +95192000,Nodular lymphoma of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +188570009,"Hodgkin's disease, nodular sclerosis of intrapelvic lymph nodes (disorder)",y,descendant of concept mapped from leaf +94463004,Secondary malignant neoplasm of paramammary lymph nodes (disorder),y,descendant of concept mapped from leaf +707703001,Primary squamous cell carcinoma of postcricoid region (disorder),y,descendant of concept mapped from leaf +399490008,Adenocarcinoma of prostate (disorder),y,descendant of concept mapped from leaf +94486006,Secondary malignant neoplasm of phalanx of foot (disorder),y,descendant of concept mapped from leaf +449065000,Diffuse non-Hodgkin's lymphoma of nose (disorder),y,descendant of concept mapped from leaf +188642004,Malignant histiocytosis of lymph nodes of inguinal region and lower limb (disorder),y,descendant of concept mapped from leaf +448954003,Malignant epithelial neoplasm of urethra (disorder),y,descendant of concept mapped from leaf +94090003,Primary malignant neoplasm of omentum (disorder),y,descendant of concept mapped from leaf +402537005,Metastatic basal cell carcinoma (disorder),y,descendant of concept mapped from leaf +94466007,Secondary malignant neoplasm of pararectal lymph nodes (disorder),y,descendant of concept mapped from leaf +369593002,Malignant tumor involving vulva by separate metastasis from vagina (disorder),y,descendant of concept mapped from leaf +94556001,Secondary malignant neoplasm of skin of foot (disorder),y,descendant of concept mapped from leaf +447738006,Paget's disease of skin of scrotum (disorder),y,descendant of concept mapped from leaf +184871000119108,Primary adenocarcinoma of pelvis (disorder),y,descendant of concept mapped from leaf +128912009,"Ganglioglioma, anaplastic (morphologic abnormality)",y,descendant of concept mapped from leaf +94403001,Secondary malignant neoplasm of mandible (disorder),y,descendant of concept mapped from leaf +403900000,Spindle cell squamous cell carcinoma (disorder),y,descendant of concept mapped from leaf +127070008,Malignant histiocytic disorder (disorder),y,descendant of concept mapped from leaf +369559001,Malignant tumor involving left ovary by direct extension from vagina (disorder),y,descendant of concept mapped from leaf +127220001,Malignant lymphoma of lymph nodes (disorder),y,descendant of concept mapped from leaf +707409003,Primary acinar cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +702785000,Large cell anaplastic lymphoma T cell and Null cell type (disorder),y,descendant of concept mapped from leaf +404070007,Round cell liposarcoma (disorder),y,descendant of concept mapped from leaf +609515005,Epithelioid trophoblastic tumor (disorder),y,descendant of concept mapped from leaf +94543008,Secondary malignant neoplasm of skin of back (disorder),y,descendant of concept mapped from leaf +93142004,Leukemia in remission (disorder),y,descendant of concept mapped from leaf +187868006,"Malignant neoplasm of lower lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +277643003,High grade T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +369511001,Malignant tumor involving vulva by direct extension from uterus (disorder),y,descendant of concept mapped from leaf +448665005,Malignant epithelial neoplasm of hypopharynx (disorder),y,descendant of concept mapped from leaf +763884007,Splenic diffuse red pulp small B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +128913004,Retinocytoma (morphologic abnormality),y,descendant of concept mapped from leaf +766935007,Primary bone lymphoma (disorder),y,descendant of concept mapped from leaf +707430007,Overlapping squamous cell carcinoma of laryngeal cartilage (disorder),y,descendant of concept mapped from leaf +307341004,Atypical hairy cell leukemia (disorder),y,descendant of concept mapped from leaf +707362006,Malignant melanoma of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +109879008,Overlapping malignant neoplasm of body of uterus (disorder),y,descendant of concept mapped from leaf +371975007,Primary malignant neoplasm of border of tongue (disorder),y,descendant of concept mapped from leaf +7391000119103,Primary adenoid cystic carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +402512000,Basal cell carcinoma of antitragus (disorder),y,descendant of concept mapped from leaf +703228009,Non-small cell lung cancer with mutation in epidermal growth factor receptor (disorder),y,descendant of concept mapped from leaf +277615007,Low grade B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +369608007,Malignant tumor involving an organ by separate metastasis from uterus (disorder),y,descendant of concept mapped from leaf +404111002,Lymphomatoid papulosis-associated mycosis fungoides (disorder),y,descendant of concept mapped from leaf +93527005,Hodgkin's disease of spleen (disorder),y,descendant of concept mapped from leaf +722519007,Primary sarcoma of peritoneum (disorder),y,descendant of concept mapped from leaf +128774006,Intracortical osteosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +94209000,Secondary malignant neoplasm of blood vessel of trunk (disorder),y,descendant of concept mapped from leaf +721643000,Primary malignant mesenchymal neoplasm of stomach (disorder),y,descendant of concept mapped from leaf +94079008,Primary malignant neoplasm of supraclavicular region (disorder),y,descendant of concept mapped from leaf +93922007,Primary malignant neoplasm of neck (disorder),y,descendant of concept mapped from leaf +447800002,Adenocarcinoma of scrotum (disorder),y,descendant of concept mapped from leaf +9541000119105,Primary adenocarcinoma of gallbladder (disorder),y,descendant of concept mapped from leaf +94524008,Secondary malignant neoplasm of right upper lobe of lung (disorder),y,descendant of concept mapped from leaf +420890002,Precursor T cell lymphoblastic leukemia/lymphoblastic lymphoma (disorder),y,descendant of concept mapped from leaf +369575003,Malignant tumor involving uterine corpus by separate metastasis from fallopian tube (disorder),y,descendant of concept mapped from leaf +449058008,Follicular non-Hodgkin's lymphoma of tonsil (disorder),y,descendant of concept mapped from leaf +721624000,Primary adenocarcinoma of overlapping lesion of esophagus (disorder),y,descendant of concept mapped from leaf +93206004,Malignant mast cell tumor of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +402547008,Basal cell carcinoma - multiple recurrences (more than three times) (disorder),y,descendant of concept mapped from leaf +448993007,Malignant epithelial neoplasm of lung (disorder),y,descendant of concept mapped from leaf +371966005,Primary malignant neoplasm of adrenal medulla (disorder),y,descendant of concept mapped from leaf +94277004,Secondary malignant neoplasm of ectopic male breast tissue (disorder),y,descendant of concept mapped from leaf +94128004,"Primary malignant neoplasm of uveal tract, primary (disorder)",y,descendant of concept mapped from leaf +93669004,Primary malignant neoplasm of anal canal (disorder),y,descendant of concept mapped from leaf +353661000119102,Overlapping primary malignant neoplasm of bone and articular cartilage of lower limb (disorder),y,descendant of concept mapped from leaf +707584007,Primary lymphoepithelial carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +423506005,Squamous cell carcinoma of external auditory canal (disorder),y,descendant of concept mapped from leaf +93145002,Leukemic reticuloendotheliosis of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +404107008,Patch/plaque stage mycosis fungoides (disorder),y,descendant of concept mapped from leaf +447710003,Dermatofibrosarcoma protuberans of skin of shoulder (disorder),y,descendant of concept mapped from leaf +94679009,Secondary malignant neoplasm of vocal cord (disorder),y,descendant of concept mapped from leaf +423038006,Polymorphous low grade adenocarcinoma of salivary gland (disorder),y,descendant of concept mapped from leaf +402501000,Basal cell carcinoma of supratip of nose (disorder),y,descendant of concept mapped from leaf +187869003,Malignant neoplasm of lower lobe bronchus (disorder),y,descendant of concept mapped from leaf +254620000,Squamous cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +188585003,"Hodgkin's disease, lymphocytic depletion of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +402879006,T-cell leukemic infiltration of skin (disorder),y,descendant of concept mapped from leaf +369463005,Malignant tumor involving ureter by direct extension from bladder (disorder),y,descendant of concept mapped from leaf +421246008,Precursor T-cell lymphoblastic lymphoma (disorder),y,descendant of concept mapped from leaf +94076001,Primary malignant neoplasm of sublingual gland (disorder),y,descendant of concept mapped from leaf +188504001,Lymphosarcoma of lymph nodes of inguinal region and lower limb (disorder),y,descendant of concept mapped from leaf +369541004,Malignant tumor involving left fallopian tube by direct extension from vagina (disorder),y,descendant of concept mapped from leaf +94061009,Primary malignant neoplasm of soft tissues of shoulder (disorder),y,descendant of concept mapped from leaf +449260004,Malignant neoplasm of alveolus dentalis (disorder),y,descendant of concept mapped from leaf +402560002,Materno-fetal metastatic malignant melanoma (disorder),y,descendant of concept mapped from leaf +418372008,Squamous cell carcinoma of mucous membrane of lower lip (disorder),y,descendant of concept mapped from leaf +707423001,Primary basaloid carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +277637000,Large cell anaplastic lymphoma (disorder),y,descendant of concept mapped from leaf +424887002,"Primary malignant neoplasm of thyroid gland, metastatic to bone (disorder)",y,descendant of concept mapped from leaf +702786004,Follicular non-Hodgkin's lymphoma diffuse follicle center sub-type grade 1 (disorder),y,descendant of concept mapped from leaf +254711000,Adenoid cystic eccrine carcinoma of skin (disorder),y,descendant of concept mapped from leaf +449634005,Primary malignant neoplasm of skin of lower leg (disorder),y,descendant of concept mapped from leaf +404109006,Follicular mucinosis type mycosis fungoides (disorder),y,descendant of concept mapped from leaf +94047004,Primary malignant neoplasm of skin (disorder),y,descendant of concept mapped from leaf +403898002,Squamous cell carcinoma of skin of lower extremity (disorder),y,descendant of concept mapped from leaf +369456005,Malignant tumor involving rectum by separate metastasis from fallopian tube (disorder),y,descendant of concept mapped from leaf +448296006,Dermatofibrosarcoma protuberans of skin of chest (disorder),y,descendant of concept mapped from leaf +707146006,Metastatic embryonal rhabdomyosarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +93169003,Lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +369536007,Secondary neoplasm of right broad ligament (disorder),y,descendant of concept mapped from leaf +734066005,Diffuse large B-cell lymphoma of central nervous system (disorder),y,descendant of concept mapped from leaf +269475001,"Malignant tumor of lymphoid, hemopoietic AND/OR related tissue (disorder)",y,descendant of concept mapped from leaf +94152006,Secondary malignant neoplasm of abdominal esophagus (disorder),y,descendant of concept mapped from leaf +93905005,Primary malignant neoplasm of muscle of lower limb (disorder),y,descendant of concept mapped from leaf +762457009,Astroblastoma of brain (disorder),y,descendant of concept mapped from leaf +94107008,Primary malignant neoplasm of trapezoid bone (disorder),y,descendant of concept mapped from leaf +94131003,Primary malignant neoplasm of vagus nerve (disorder),y,descendant of concept mapped from leaf +277610002,"Hodgkin's disease, nodular sclerosis - lymphocytic predominance (disorder)",y,descendant of concept mapped from leaf +94163009,Secondary malignant neoplasm of alveolar ridge mucosa (disorder),y,descendant of concept mapped from leaf +443136000,Malignant neoplasm of skin of face (disorder),y,descendant of concept mapped from leaf +352311000119100,Primary malignant neoplasm of soft tissue of right lower extremity (disorder),y,descendant of concept mapped from leaf +369547000,Malignant tumor involving right fallopian tube by direct extension from endometrium (disorder),y,descendant of concept mapped from leaf +94036006,Primary malignant neoplasm of skin of perineum (disorder),y,descendant of concept mapped from leaf +723265000,Primary squamous cell carcinoma of anus (disorder),y,descendant of concept mapped from leaf +369531002,Malignant tumor involving right ovary by direct extension from endometrium (disorder),y,descendant of concept mapped from leaf +404128004,CD-30 negative cutaneous T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +94246001,Secondary malignant neoplasm of cerebral meninges (disorder),y,descendant of concept mapped from leaf +94417005,Secondary malignant neoplasm of multiple endocrine glands (disorder),y,descendant of concept mapped from leaf +93751003,Primary malignant neoplasm of cervical vertebral column (disorder),y,descendant of concept mapped from leaf +403712008,Psoralen and long-wave ultraviolet radiation therapy-associated basal cell carcinoma (disorder),y,descendant of concept mapped from leaf +94043000,Primary malignant neoplasm of skin of trunk (disorder),y,descendant of concept mapped from leaf +94461002,Secondary malignant neoplasm of para-aortic body (disorder),y,descendant of concept mapped from leaf +313357008,Squamous cell carcinoma of bronchus in right upper lobe (disorder),y,descendant of concept mapped from leaf +717922007,Well-differentiated neuroendocrine carcinoma of thymus (disorder),y,descendant of concept mapped from leaf +109870007,Overlapping malignant neoplasm of urinary system (disorder),y,descendant of concept mapped from leaf +21851000119103,Malignant pheochromocytoma (disorder),y,descendant of concept mapped from leaf +118599009,Hodgkin's disease (disorder),y,descendant of concept mapped from leaf +707472008,Primary papillary adenocarcinoma of trachea (disorder),y,descendant of concept mapped from leaf +25050002,"Alpha heavy chain disease, respiratory form (disorder)",y,descendant of concept mapped from leaf +93843007,Primary malignant neoplasm of islets of Langerhans (disorder),y,descendant of concept mapped from leaf +93150008,Leukemic reticuloendotheliosis of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +722683006,Primary neuroendocrine carcinoma of cervix uteri (disorder),y,descendant of concept mapped from leaf +354621000119105,Overlapping primary malignant neoplasm of bone and articular cartilage of left upper limb (disorder),y,descendant of concept mapped from leaf +733348001,Primary malignant neuroendocrine neoplasm of cystic duct (disorder),y,descendant of concept mapped from leaf +93784003,Primary malignant neoplasm of epiglottis (disorder),y,descendant of concept mapped from leaf +721548003,Primary malignant neoplasm of lacrimal apparatus (disorder),y,descendant of concept mapped from leaf +94160007,Secondary malignant neoplasm of adrenal cortex (disorder),y,descendant of concept mapped from leaf +699704002,Classic medulloblastoma (disorder),y,descendant of concept mapped from leaf +369605005,Malignant tumor involving an organ by separate metastasis from ovary (disorder),y,descendant of concept mapped from leaf +352201000119105,Malignant melanoma of skin of left upper limb (disorder),y,descendant of concept mapped from leaf +94652005,Secondary malignant neoplasm of upper gum (disorder),y,descendant of concept mapped from leaf +369546009,Malignant tumor involving left fallopian tube by separate metastasis from vagina (disorder),y,descendant of concept mapped from leaf +188524002,Hodgkin's paragranuloma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +722444002,Primary giant cell sarcoma of retroperitoneum (disorder),y,descendant of concept mapped from leaf +722542000,Primary squamous cell carcinoma of anal canal (disorder),y,descendant of concept mapped from leaf +1081751000119103,Primary sarcoma of right lower limb (disorder),y,descendant of concept mapped from leaf +94435001,Secondary malignant neoplasm of nasal bone (disorder),y,descendant of concept mapped from leaf +307617006,Neutrophilic leukemia (disorder),y,descendant of concept mapped from leaf +188576003,"Hodgkin's disease, mixed cellularity of intrathoracic lymph nodes (disorder)",y,descendant of concept mapped from leaf +94108003,Primary malignant neoplasm of trigeminal nerve (disorder),y,descendant of concept mapped from leaf +709191009,Metastatic papillary thyroid carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +94635006,Secondary malignant neoplasm of tibia (disorder),y,descendant of concept mapped from leaf +707339009,Primary adenocarcinoma of maxillary sinus (disorder),y,descendant of concept mapped from leaf +700488005,Malignant sex cord tumor of testis (disorder),y,descendant of concept mapped from leaf +254948003,Astrocytoma of spinal cord (disorder),y,descendant of concept mapped from leaf +449635006,Primary malignant neoplasm of lower leg (disorder),y,descendant of concept mapped from leaf +402876004,Malignant tumor of nerve sheath origin (disorder),y,descendant of concept mapped from leaf +12311000132101,Refractory acute lymphoid leukemia (disorder),y,descendant of concept mapped from leaf +95264000,Sézary's disease of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +423050000,"Large cell carcinoma of lung, TNM stage 2 (disorder)",y,descendant of concept mapped from leaf +369565001,Malignant tumor involving left ovary by separate metastasis uterus (disorder),y,descendant of concept mapped from leaf +93642000,Malignant melanoma of skin of neck (disorder),y,descendant of concept mapped from leaf +91856007,Acute lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +93705004,Primary malignant neoplasm of blood vessel of pelvis (disorder),y,descendant of concept mapped from leaf +94507002,Secondary malignant neoplasm of pyriform sinus (disorder),y,descendant of concept mapped from leaf +369600000,Malignant tumor involving an organ by direct extension from uterus (disorder),y,descendant of concept mapped from leaf +278051002,Malignant lymphoma of thyroid gland (disorder),y,descendant of concept mapped from leaf +94354002,Secondary malignant neoplasm of islets of Langerhans (disorder),y,descendant of concept mapped from leaf +735918005,Primary malignant neoplasm of lacrimal caruncle (disorder),y,descendant of concept mapped from leaf +94472007,Secondary malignant neoplasm of parietal peritoneum (disorder),y,descendant of concept mapped from leaf +369592007,Malignant tumor involving vulva by separate metastasis from uterus (disorder),y,descendant of concept mapped from leaf +94401004,Secondary malignant neoplasm of male breast (disorder),y,descendant of concept mapped from leaf +93944002,Primary malignant neoplasm of paraurethral glands (disorder),y,descendant of concept mapped from leaf +94247005,Secondary malignant neoplasm of cerebral ventricle (disorder),y,descendant of concept mapped from leaf +369485004,Malignant tumor involving prostate by direct extension from bladder (disorder),y,descendant of concept mapped from leaf +254726003,Malignant skin tumor with apocrine differentiation (disorder),y,descendant of concept mapped from leaf +1080231000119108,Infiltrating ductal carcinoma of upper inner quadrant of right female breast (disorder),y,descendant of concept mapped from leaf +448371005,Non-Hodgkin's lymphoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +188748009,Aleukemic monocytic leukemia (disorder),y,descendant of concept mapped from leaf +94535003,Secondary malignant neoplasm of short bone of lower limb (disorder),y,descendant of concept mapped from leaf +307637005,"Malignant lymphoma, centroblastic-centrocytic, follicular (disorder)",y,descendant of concept mapped from leaf +440397000,Primary osteosarcoma of pelvis (disorder),y,descendant of concept mapped from leaf +722953004,B-cell lymphoma unclassifiable with features intermediate between Burkitt lymphoma and diffuse large B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +15635801000119106,Primary malignant neoplasm of bilateral female breasts (disorder),y,descendant of concept mapped from leaf +91861009,"Acute myeloid leukemia, disease (disorder)",y,descendant of concept mapped from leaf +93931007,Primary malignant neoplasm of optic nerve (disorder),y,descendant of concept mapped from leaf +422676009,Squamous cell carcinoma of ala nasi (disorder),y,descendant of concept mapped from leaf +269617008,Secondary nodes - inguinal/leg (disorder),y,descendant of concept mapped from leaf +285776004,Intermediate grade B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +188676008,Malignant lymphoma - mixed small and large cell (disorder),y,descendant of concept mapped from leaf +94485005,Secondary malignant neoplasm of perirenal tissue (disorder),y,descendant of concept mapped from leaf +277550009,Richter's syndrome (disorder),y,descendant of concept mapped from leaf +1079111000119108,Primary basal cell carcinoma of left eyelid (disorder),y,descendant of concept mapped from leaf +403458008,Localized skin involvement by breast carcinoma (disorder),y,descendant of concept mapped from leaf +441313008,Indolent multiple myeloma (disorder),y,descendant of concept mapped from leaf +372005006,Primary malignant neoplasm of penis (disorder),y,descendant of concept mapped from leaf +404126000,CD-30 positive pleomorphic large T-cell cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +94429001,Secondary malignant neoplasm of muscle of thorax (disorder),y,descendant of concept mapped from leaf +94430006,Secondary malignant neoplasm of muscle of trunk (disorder),y,descendant of concept mapped from leaf +426885008,"Hodgkin's disease, lymphocytic depletion of lymph nodes of head (disorder)",y,descendant of concept mapped from leaf +847481000000109,Follicular lymphoma grade 1 (disorder),y,descendant of concept mapped from leaf +94382009,Secondary malignant neoplasm of long bone of lower limb (disorder),y,descendant of concept mapped from leaf +448553002,Lymphoma of pelvis (disorder),y,descendant of concept mapped from leaf +236811000119101,Paget disease of anal canal (disorder),y,descendant of concept mapped from leaf +94226006,Secondary malignant neoplasm of broad ligament (disorder),y,descendant of concept mapped from leaf +94483003,Secondary malignant neoplasm of perianal skin (disorder),y,descendant of concept mapped from leaf +400174005,Basal cell carcinoma of antihelix of ear (disorder),y,descendant of concept mapped from leaf +699354006,Sarcoma of orbit (disorder),y,descendant of concept mapped from leaf +93534007,Hodgkin's granuloma of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +93749002,Primary malignant neoplasm of cerebrum (disorder),y,descendant of concept mapped from leaf +713293002,Malignant germ cell neoplasm of mediastinum (disorder),y,descendant of concept mapped from leaf +93712008,Primary malignant neoplasm of blood vessel of trunk (disorder),y,descendant of concept mapped from leaf +188734009,Chronic neutrophilic leukemia (disorder),y,descendant of concept mapped from leaf +707590006,Primary acinar cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94480000,Secondary malignant neoplasm of pelvis (disorder),y,descendant of concept mapped from leaf +427492003,Hormone refractory prostate cancer (disorder),y,descendant of concept mapped from leaf +388650006,Desmoplastic mesothelioma (morphologic abnormality),y,descendant of concept mapped from leaf +94546000,Secondary malignant neoplasm of skin of cheek (disorder),y,descendant of concept mapped from leaf +723846002,Primary chondrosarcoma of bone of rib (disorder),y,descendant of concept mapped from leaf +359780007,Metastatic malignant neoplasm to lateral axillary lymph nodes (disorder),y,descendant of concept mapped from leaf +93213004,Malignant melanoma of skin of axilla (disorder),y,descendant of concept mapped from leaf +702346005,Chromosome 11p11.2 deletion syndrome (disorder),y,descendant of concept mapped from leaf +1080151000119109,Infiltrating ductal carcinoma of upper inner quadrant of left female breast (disorder),y,descendant of concept mapped from leaf +1079101000119105,Primary basal cell carcinoma of left ear (disorder),y,descendant of concept mapped from leaf +402541009,Basal cell carcinoma recurrent following curettage (disorder),y,descendant of concept mapped from leaf +446189008,Primary malignant neoplasm of extrahepatic bile duct (disorder),y,descendant of concept mapped from leaf +402532004,Basal cell carcinoma with monster cells (disorder),y,descendant of concept mapped from leaf +92527000,Carcinoma in situ of adrenal gland (disorder),y,descendant of concept mapped from leaf +369589008,Malignant tumor involving vulva by separate metastasis from fallopian tube (disorder),y,descendant of concept mapped from leaf +94656008,Secondary malignant neoplasm of upper respiratory tract (disorder),y,descendant of concept mapped from leaf +402871009,Malignant neoplasm of subcutaneous fibrous tissue (disorder),y,descendant of concept mapped from leaf +699659007,Glandular malignant peripheral nerve sheath tumor (disorder),y,descendant of concept mapped from leaf +99121000119105,Primary adenocarcinoma of vagina (disorder),y,descendant of concept mapped from leaf +93521006,Hodgkin's disease of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +369607002,Malignant tumor involving an organ by separate metastasis from uterine cervix (disorder),y,descendant of concept mapped from leaf +371991005,Primary malignant neoplasm of hard palate (disorder),y,descendant of concept mapped from leaf +733351008,Primary malignant neuroendocrine neoplasm of ampulla of Vater (disorder),y,descendant of concept mapped from leaf +404120006,Localized pagetoid reticulosis (disorder),y,descendant of concept mapped from leaf +109992005,Polycythemia vera (disorder),y,descendant of concept mapped from leaf +369569007,Malignant tumor involving right ovary by separate metastasis from fallopian tube (disorder),y,descendant of concept mapped from leaf +353741000119106,Secondary malignant neoplasm of left lung (disorder),y,descendant of concept mapped from leaf +721632008,Primary adenocarcinoma of pyloric antrum of stomach (disorder),y,descendant of concept mapped from leaf +93134000,Letterer-Siwe disease of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +188640007,"Malignant histiocytosis of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +449633004,Secondary malignant neoplasm of upper arm (disorder),y,descendant of concept mapped from leaf +93543003,Hodgkin's paragranuloma of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +188132000,Malignant neoplasm of skin of popliteal fossa area (disorder),y,descendant of concept mapped from leaf +372104008,Carcinoma of subglottis (disorder),y,descendant of concept mapped from leaf +447882007,Malignant epithelial neoplasm of vulva (disorder),y,descendant of concept mapped from leaf +94255003,Secondary malignant neoplasm of ciliary body (disorder),y,descendant of concept mapped from leaf +94154007,Secondary malignant neoplasm of accessory nerve (disorder),y,descendant of concept mapped from leaf +94011000,Primary malignant neoplasm of skin of back (disorder),y,descendant of concept mapped from leaf +403947009,Perianal Paget's disease (disorder),y,descendant of concept mapped from leaf +94553009,Secondary malignant neoplasm of skin of eyelid (disorder),y,descendant of concept mapped from leaf +373081007,Malignant neoplasm of breast lower outer quadrant (disorder),y,descendant of concept mapped from leaf +373088001,Primary malignant neoplasm of breast upper outer quadrant (disorder),y,descendant of concept mapped from leaf +277574007,Null cell acute lymphoblastic leukemia (disorder),y,descendant of concept mapped from leaf +277624003,Follicular malignant lymphoma - mixed cell type (disorder),y,descendant of concept mapped from leaf +449101009,Sarcoma of sternum (disorder),y,descendant of concept mapped from leaf +93552007,Hodgkin's sarcoma of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +722795004,Meningeal leukemia (disorder),y,descendant of concept mapped from leaf +93494007,"Hodgkin's disease, lymphocytic-histiocytic predominance of intrapelvic lymph nodes (disorder)",y,descendant of concept mapped from leaf +372030009,Primary malignant neoplasm of vocal cord (disorder),y,descendant of concept mapped from leaf +722517009,Primary malignant nerve sheath neoplasm of peripheral nervous system structure (disorder),y,descendant of concept mapped from leaf +93700009,Primary malignant neoplasm of blood vessel of hip (disorder),y,descendant of concept mapped from leaf +277613000,Cutaneous/peripheral T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +397079001,"Mucoepidermoid carcinoma, low grade (morphologic abnormality)",y,descendant of concept mapped from leaf +733356003,Primary mucinous carcinoma of digestive organ (disorder),y,descendant of concept mapped from leaf +448450001,Sarcoma of omentum (disorder),y,descendant of concept mapped from leaf +188575004,"Hodgkin's disease, mixed cellularity of lymph nodes of head, face and neck (disorder)",y,descendant of concept mapped from leaf +94037002,Primary malignant neoplasm of skin of popliteal area (disorder),y,descendant of concept mapped from leaf +13048006,Orbital lymphoma (disorder),y,descendant of concept mapped from leaf +722528008,Primary malignant neuroendocrine neoplasm of lung (disorder),y,descendant of concept mapped from leaf +863781000000100,Clinical stage C chronic lymphocytic leukaemia (disorder),y,descendant of concept mapped from leaf +93506000,"Hodgkin's disease, mixed cellularity of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +94521000,Secondary malignant neoplasm of rib (disorder),y,descendant of concept mapped from leaf +68979007,Heavy chain disease (disorder),y,descendant of concept mapped from leaf +93549004,Hodgkin's sarcoma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +93229007,Malignant melanoma of skin of forehead (disorder),y,descendant of concept mapped from leaf +94300004,Secondary malignant neoplasm of femur (disorder),y,descendant of concept mapped from leaf +277619001,B-cell prolymphocytic leukemia (disorder),y,descendant of concept mapped from leaf +448212009,Anaplastic lymphoma kinase negative anaplastic large cell lymphoma (disorder),y,descendant of concept mapped from leaf +94502008,Secondary malignant neoplasm of presacral region (disorder),y,descendant of concept mapped from leaf +94664002,Secondary malignant neoplasm of uterine adnexa (disorder),y,descendant of concept mapped from leaf +109925003,Primary malignant neoplasm of peripheral nerves of face (disorder),y,descendant of concept mapped from leaf +93768004,Primary malignant neoplasm of craniopharyngeal duct (disorder),y,descendant of concept mapped from leaf +94522007,Secondary malignant neoplasm of right lower lobe of lung (disorder),y,descendant of concept mapped from leaf +94003005,Primary malignant neoplasm of short bone of lower limb (disorder),y,descendant of concept mapped from leaf +278453007,Acute biphenotypic leukemia (disorder),y,descendant of concept mapped from leaf +93900000,Primary malignant neoplasm of muscle of buttock (disorder),y,descendant of concept mapped from leaf +92817004,Chronic myeloid leukemia in remission (disorder),y,descendant of concept mapped from leaf +109933002,Primary malignant neoplasm of peripheral nerves of shoulder (disorder),y,descendant of concept mapped from leaf +254898001,Paget's disease of vulva (disorder),y,descendant of concept mapped from leaf +767448007,Pineoblastoma (disorder),y,descendant of concept mapped from leaf +408643008,Infiltrating duct carcinoma of breast (disorder),y,descendant of concept mapped from leaf +93960003,Primary malignant neoplasm of phalanx of hand (disorder),y,descendant of concept mapped from leaf +94606003,Secondary malignant neoplasm of stomach (disorder),y,descendant of concept mapped from leaf +707575007,Primary squamous cell carcinoma of supraglottis (disorder),y,descendant of concept mapped from leaf +92515003,Burkitt's tumor of spleen (disorder),y,descendant of concept mapped from leaf +94633004,Secondary malignant neoplasm of thyroglossal duct (disorder),y,descendant of concept mapped from leaf +94135007,Primary malignant neoplasm of vermilion border of lip (disorder),y,descendant of concept mapped from leaf +254707006,Malignant skin tumor with eccrine differentiation (disorder),y,descendant of concept mapped from leaf +707591005,Primary mucoepidermoid carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +371983001,Primary malignant neoplasm of endocrine gland (disorder),y,descendant of concept mapped from leaf +94259009,Secondary malignant neoplasm of coccyx (disorder),y,descendant of concept mapped from leaf +369506003,Malignant tumor involving vagina by direct extension from fallopian tube (disorder),y,descendant of concept mapped from leaf +94240007,Secondary malignant neoplasm of carpal bone (disorder),y,descendant of concept mapped from leaf +93984006,Primary malignant neoplasm of rectum (disorder),y,descendant of concept mapped from leaf +766979005,Squamous cell carcinoma of rectum (disorder),y,descendant of concept mapped from leaf +93989001,Primary malignant neoplasm of retromolar area (disorder),y,descendant of concept mapped from leaf +425148008,Squamous cell carcinoma of temple (disorder),y,descendant of concept mapped from leaf +94156009,Secondary malignant neoplasm of acoustic nerve (disorder),y,descendant of concept mapped from leaf +448988009,Malignant epithelial neoplasm of nose (disorder),y,descendant of concept mapped from leaf +733123006,Diffuse leptomeningeal glioneuronal neoplasm (morphologic abnormality),y,descendant of concept mapped from leaf +419240004,Squamous cell carcinoma of mucous membrane of upper lip (disorder),y,descendant of concept mapped from leaf +722666002,Primary squamous cell carcinoma of lacrimal apparatus (disorder),y,descendant of concept mapped from leaf +94367004,Secondary malignant neoplasm of laryngeal aspect of interarytenoid fold (disorder),y,descendant of concept mapped from leaf +109995007,Myelodysplastic syndrome (disorder),y,descendant of concept mapped from leaf +444910004,Primary mediastinal (thymic) large B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +188738007,Granulocytic sarcoma (disorder),y,descendant of concept mapped from leaf +93509007,"Hodgkin's disease, mixed cellularity of spleen (disorder)",y,descendant of concept mapped from leaf +94054005,Primary malignant neoplasm of soft tissues of head (disorder),y,descendant of concept mapped from leaf +384951004,Carcinoma of salivary gland type (morphologic abnormality),y,descendant of concept mapped from leaf +93187000,Malignant histiocytosis of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +733350009,Primary malignant neuroendocrine of distal bile duct (disorder),y,descendant of concept mapped from leaf +91858008,Acute monocytic leukemia in remission (disorder),y,descendant of concept mapped from leaf +93541001,Hodgkin's paragranuloma of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +449219006,Follicular non-Hodgkin's lymphoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +738527001,Myeloid and/or lymphoid neoplasm associated with platelet derived growth factor receptor alpha rearrangement (disorder),y,descendant of concept mapped from leaf +94582005,Secondary malignant neoplasm of soft tissues of abdomen (disorder),y,descendant of concept mapped from leaf +303017006,"Malignant lymphoma, convoluted cell type (disorder)",y,descendant of concept mapped from leaf +707395000,Primary adenocarcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +313428008,Seminoma of undescended testis (disorder),y,descendant of concept mapped from leaf +733358002,Primary squamous cell carcinoma of respiratory system (disorder),y,descendant of concept mapped from leaf +94445004,Secondary malignant neoplasm of nose (disorder),y,descendant of concept mapped from leaf +369494005,Malignant tumor involving uterine corpus by direct extension from ovary (disorder),y,descendant of concept mapped from leaf +94304008,Secondary malignant neoplasm of floor of mouth (disorder),y,descendant of concept mapped from leaf +93828005,Primary malignant neoplasm of hypoglossal nerve (disorder),y,descendant of concept mapped from leaf +109838007,Overlapping malignant neoplasm of colon (disorder),y,descendant of concept mapped from leaf +93717002,Primary malignant neoplasm of body of stomach (disorder),y,descendant of concept mapped from leaf +420519005,Malignant lymphoma of the eye region (disorder),y,descendant of concept mapped from leaf +93857009,Primary malignant neoplasm of laryngeal commissure (disorder),y,descendant of concept mapped from leaf +61301000119102,Disorder of central nervous system co-occurrent and due to acute lymphoid leukemia (disorder),y,descendant of concept mapped from leaf +721603005,Primary choriocarcinoma of testis (disorder),y,descendant of concept mapped from leaf +765143008,Sporadic pheochromocytoma and secreting paraganglioma (disorder),y,descendant of concept mapped from leaf +188501009,Lymphosarcoma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +733848006,Anaplastic pleomorphic xanthoastrocytoma (morphologic abnormality),y,descendant of concept mapped from leaf +93911008,Primary malignant neoplasm of muscle of trunk (disorder),y,descendant of concept mapped from leaf +707349007,Primary carcinoma of frontal sinus (disorder),y,descendant of concept mapped from leaf +94568005,Secondary malignant neoplasm of skin of perineum (disorder),y,descendant of concept mapped from leaf +93958000,Primary malignant neoplasm of perirenal tissue (disorder),y,descendant of concept mapped from leaf +1661000119106,Metastasis to lung from adenocarcinoma (disorder),y,descendant of concept mapped from leaf +94318001,Secondary malignant neoplasm of glottis (disorder),y,descendant of concept mapped from leaf +93690007,Primary malignant neoplasm of blood vessel of abdomen (disorder),y,descendant of concept mapped from leaf +109822001,Overlapping malignant neoplasm of lip (disorder),y,descendant of concept mapped from leaf +445406001,Hepatosplenic T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +721560002,Primary adenocarcinoma of nasal cavity (disorder),y,descendant of concept mapped from leaf +188507008,Lymphosarcoma of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +94258001,Secondary malignant neoplasm of coccygeal body (disorder),y,descendant of concept mapped from leaf +253074002,Desmoplastic juvenile ganglioglioma (morphologic abnormality),y,descendant of concept mapped from leaf +707384006,Primary solid carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +402498000,Basal cell carcinoma of dorsum of nose (disorder),y,descendant of concept mapped from leaf +404046008,Myxoid leiomyosarcoma of skin (disorder),y,descendant of concept mapped from leaf +721699002,Primary adenocarcinoma of descending colon and splenic flexure (disorder),y,descendant of concept mapped from leaf +732968009,Pheochromocytoma crisis (disorder),y,descendant of concept mapped from leaf +403891008,Squamous cell carcinoma of scalp (disorder),y,descendant of concept mapped from leaf +276751004,Amelanotic malignant melanoma of skin (disorder),y,descendant of concept mapped from leaf +709031009,Malignant neoplasm of superior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +721555001,Follicular lymphoma of small intestine (disorder),y,descendant of concept mapped from leaf +93660000,Primary malignant neoplasm of acoustic nerve (disorder),y,descendant of concept mapped from leaf +399477001,Sarcomatoid mesothelioma (morphologic abnormality),y,descendant of concept mapped from leaf +707532001,Primary squamous cell carcinoma of posterior wall of oropharynx (disorder),y,descendant of concept mapped from leaf +373168002,Reticulosarcoma (disorder),y,descendant of concept mapped from leaf +737312002,Primary malignant neuroendocrine neoplasm of jejunum (disorder),y,descendant of concept mapped from leaf +448221005,Sarcoma of fibula (disorder),y,descendant of concept mapped from leaf +94500000,Secondary malignant neoplasm of posterior wall of urinary bladder (disorder),y,descendant of concept mapped from leaf +438946002,Siewert type I adenocarcinoma of esophagogastric junction (disorder),y,descendant of concept mapped from leaf +188541000,Hodgkin's granuloma of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +109882003,Primary malignant neoplasm of fundus uteri (disorder),y,descendant of concept mapped from leaf +94159002,Secondary malignant neoplasm of adnexa of skin (disorder),y,descendant of concept mapped from leaf +94557005,Secondary malignant neoplasm of skin of forearm (disorder),y,descendant of concept mapped from leaf +94176003,Secondary malignant neoplasm of areola of female breast (disorder),y,descendant of concept mapped from leaf +93985007,Primary malignant neoplasm of renal pelvis (disorder),y,descendant of concept mapped from leaf +277551008,Splenic lymphoma with villous lymphocytes (disorder),y,descendant of concept mapped from leaf +92814006,"Chronic lymphoid leukemia, disease (disorder)",y,descendant of concept mapped from leaf +402531006,Basal cell carcinoma with granular cell change (disorder),y,descendant of concept mapped from leaf +94686001,Mixed cell type lymphosarcoma of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +277618009,Follicular low grade B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +424849005,Primary sarcoma of tongue (disorder),y,descendant of concept mapped from leaf +369581006,Malignant tumor involving vagina by separate metastasis from bladder (disorder),y,descendant of concept mapped from leaf +735921007,Primary malignant neuroepithelial neoplasm of orbit (disorder),y,descendant of concept mapped from leaf +188634000,Sézary's disease of lymph nodes of inguinal region and lower limb (disorder),y,descendant of concept mapped from leaf +369465003,Malignant tumor involving urethra by direct extension from bladder (disorder),y,descendant of concept mapped from leaf +421630008,"Papillary carcinoma, clear cell (morphologic abnormality)",y,descendant of concept mapped from leaf +93876006,Primary malignant neoplasm of lower outer quadrant of female breast (disorder),y,descendant of concept mapped from leaf +735680008,Primary osteosarcoma (disorder),y,descendant of concept mapped from leaf +717731002,Basal cell carcinoma of vulva (disorder),y,descendant of concept mapped from leaf +93706003,Primary malignant neoplasm of blood vessel of perineum (disorder),y,descendant of concept mapped from leaf +707399006,Primary papillary adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94180008,Secondary malignant neoplasm of axilla (disorder),y,descendant of concept mapped from leaf +424549003,"Malignant tumor of spinal cord, extramedullary (disorder)",y,descendant of concept mapped from leaf +94239005,Secondary malignant neoplasm of carotid body (disorder),y,descendant of concept mapped from leaf +449073009,Malignant epithelial neoplasm of body of uterus (disorder),y,descendant of concept mapped from leaf +402636006,Malignant neoplasm of nail apparatus (disorder),y,descendant of concept mapped from leaf +274905008,"Malignant lymphoma - lymphocytic, intermediate differentiation (disorder)",y,descendant of concept mapped from leaf +109971005,"Follicular non-Hodgkin's lymphoma, mixed small cleaved cell and large cell (disorder)",y,descendant of concept mapped from leaf +94281004,Secondary malignant neoplasm of endometrium (disorder),y,descendant of concept mapped from leaf +422572002,Squamous cell carcinoma of chin (disorder),y,descendant of concept mapped from leaf +93793002,Primary malignant neoplasm of facial nerve (disorder),y,descendant of concept mapped from leaf +402882001,Hodgkin's disease affecting skin (disorder),y,descendant of concept mapped from leaf +402817004,Squamous cell carcinoma of nail apparatus (disorder),y,descendant of concept mapped from leaf +726653000,Malignant carcinoid tumor of bronchus (disorder),y,descendant of concept mapped from leaf +109370001,Primary malignant neoplasm of laryngeal cartilage (disorder),y,descendant of concept mapped from leaf +371134001,"Malignant lymphoma, large cell, polymorphous, immunoblastic (disorder)",y,descendant of concept mapped from leaf +188733003,Chronic eosinophilic leukemia (disorder),y,descendant of concept mapped from leaf +447885009,Sarcoma of pelvis (disorder),y,descendant of concept mapped from leaf +372122006,Malignant neoplasm of skin head and neck (disorder),y,descendant of concept mapped from leaf +93846004,Primary malignant neoplasm of jejunum (disorder),y,descendant of concept mapped from leaf +422853008,Lymphoma of retroperitoneal space (disorder),y,descendant of concept mapped from leaf +94068003,Primary malignant neoplasm of spinal cord (disorder),y,descendant of concept mapped from leaf +369524001,Malignant tumor involving left ovary by direct extension from endometrium (disorder),y,descendant of concept mapped from leaf +313250007,Malignant neoplasm of lower eyelid (disorder),y,descendant of concept mapped from leaf +448436006,Sarcoma of central portion of female breast (disorder),y,descendant of concept mapped from leaf +765741003,Adenocarcinoma of gallbladder and extrahepatic biliary tract (disorder),y,descendant of concept mapped from leaf +404136008,Aggressive natural killer-cell leukemia involving skin (disorder),y,descendant of concept mapped from leaf +721314003,Fibroblastic reticular cell neoplasm (disorder),y,descendant of concept mapped from leaf +724554001,Primary malignant epithelial neoplasm of endocrine gland (disorder),y,descendant of concept mapped from leaf +721604004,Primary squamous cell carcinoma of overlapping lesion of male genital organ (disorder),y,descendant of concept mapped from leaf +447266004,Sarcoma of endometrium (disorder),y,descendant of concept mapped from leaf +9395006,Sarcomatosis (morphologic abnormality),y,descendant of concept mapped from leaf +231832009,Basal cell carcinoma of eyelid (disorder),y,descendant of concept mapped from leaf +724647003,Diffuse large B-cell lymphoma co-occurrent with chronic inflammation caused by Epstein-Barr virus (disorder),y,descendant of concept mapped from leaf +369504000,Malignant tumor involving vagina by direct extension from bladder (disorder),y,descendant of concept mapped from leaf +352231000119103,Primary malignant neoplasm of soft tissue of left upper extremity (disorder),y,descendant of concept mapped from leaf +737311009,Primary squamous cell carcinoma of sublingual gland (disorder),y,descendant of concept mapped from leaf +277587001,Juvenile chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +93740003,Primary malignant neoplasm of carotid body (disorder),y,descendant of concept mapped from leaf +93777006,Primary malignant neoplasm of ectopic male breast tissue (disorder),y,descendant of concept mapped from leaf +94588009,Secondary malignant neoplasm of soft tissues of inguinal region (disorder),y,descendant of concept mapped from leaf +91857003,"Acute lymphoid leukemia, disease (disorder)",y,descendant of concept mapped from leaf +352001000119100,Malignant melanoma of skin of right lower limb (disorder),y,descendant of concept mapped from leaf +1082101000119106,Primary squamous cell carcinoma of skin of left lower limb (disorder),y,descendant of concept mapped from leaf +448165009,Squamous cell carcinoma arising in chronic ulcer (disorder),y,descendant of concept mapped from leaf +403977003,Angiosarcoma (disorder),y,descendant of concept mapped from leaf +93845000,Primary malignant neoplasm of jaw (disorder),y,descendant of concept mapped from leaf +94308006,Secondary malignant neoplasm of frontal bone (disorder),y,descendant of concept mapped from leaf +94288005,Secondary malignant neoplasm of ethmoidal sinus (disorder),y,descendant of concept mapped from leaf +404071006,Pleomorphic liposarcoma (disorder),y,descendant of concept mapped from leaf +703650004,"Phosphaturic mesenchymal tumor, malignant (morphologic abnormality)",y,descendant of concept mapped from leaf +402819001,Basal cell carcinoma of skin of lip (disorder),y,descendant of concept mapped from leaf +94562006,Secondary malignant neoplasm of skin of knee (disorder),y,descendant of concept mapped from leaf +94027007,Primary malignant neoplasm of skin of groin (disorder),y,descendant of concept mapped from leaf +440173001,Nonsquamous nonsmall cell neoplasm of lung (disorder),y,descendant of concept mapped from leaf +93809003,Primary malignant neoplasm of fundus of stomach (disorder),y,descendant of concept mapped from leaf +369599003,Malignant tumor involving an organ by direct extension from uterine cervix (disorder),y,descendant of concept mapped from leaf +254713002,Mucoepidermoid carcinoma of skin (disorder),y,descendant of concept mapped from leaf +369598006,Malignant tumor involving an organ by direct extension from prostate (disorder),y,descendant of concept mapped from leaf +446578007,Endometrial stromal sarcoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +109984001,Gamma heavy chain disease (disorder),y,descendant of concept mapped from leaf +93524003,"Hodgkin's disease of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +94212002,Secondary malignant neoplasm of body of pancreas (disorder),y,descendant of concept mapped from leaf +369585002,Malignant tumor involving vagina by separate metastasis from uterine cervix (disorder),y,descendant of concept mapped from leaf +93803002,Primary malignant neoplasm of foot (disorder),y,descendant of concept mapped from leaf +369471009,Malignant tumor involving bladder by direct extension from ovary (disorder),y,descendant of concept mapped from leaf +448607004,Diffuse non-Hodgkin's lymphoma of uterine cervix (disorder),y,descendant of concept mapped from leaf +716653001,Neuroendocrine carcinoma of thymus (disorder),y,descendant of concept mapped from leaf +109975001,T-zone lymphoma (disorder),y,descendant of concept mapped from leaf +372092003,Primary malignant neoplasm of axillary tail of breast (disorder),y,descendant of concept mapped from leaf +764990003,Renal mucinous tubular and spindle cell carcinoma (disorder),y,descendant of concept mapped from leaf +94555002,Secondary malignant neoplasm of skin of finger (disorder),y,descendant of concept mapped from leaf +404114005,Erythrodermic mycosis fungoides (disorder),y,descendant of concept mapped from leaf +372001002,Primary malignant neoplasm of oral cavity (disorder),y,descendant of concept mapped from leaf +93715005,Primary malignant neoplasm of body of pancreas (disorder),y,descendant of concept mapped from leaf +404040002,Malignant Triton tumor (disorder),y,descendant of concept mapped from leaf +128726006,"Endometrial stromal sarcoma, low grade (morphologic abnormality)",y,descendant of concept mapped from leaf +369570008,Malignant tumor involving right ovary by separate metastasis from left ovary (disorder),y,descendant of concept mapped from leaf +402524007,Basal cell carcinoma - adamantinoid (disorder),y,descendant of concept mapped from leaf +94109006,Primary malignant neoplasm of trigone of urinary bladder (disorder),y,descendant of concept mapped from leaf +93721009,Primary malignant neoplasm of bone of face (disorder),y,descendant of concept mapped from leaf +93730001,Primary malignant neoplasm of bronchus of left upper lobe (disorder),y,descendant of concept mapped from leaf +109357005,Primary malignant neoplasm of ill-defined site (disorder),y,descendant of concept mapped from leaf +93936002,Primary malignant neoplasm of palatine bone (disorder),y,descendant of concept mapped from leaf +94644007,Secondary malignant neoplasm of trapezium (disorder),y,descendant of concept mapped from leaf +118602004,Hodgkin's granuloma (disorder),y,descendant of concept mapped from leaf +93939009,Primary malignant neoplasm of pancreatic duct (disorder),y,descendant of concept mapped from leaf +277622004,Mucosa-associated lymphoma (disorder),y,descendant of concept mapped from leaf +93874009,Primary malignant neoplasm of lower inner quadrant of female breast (disorder),y,descendant of concept mapped from leaf +734014001,Clear cell papillary renal cell carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +188732008,Myeloid leukemia (disorder),y,descendant of concept mapped from leaf +404087009,Carcinosarcoma of skin (disorder),y,descendant of concept mapped from leaf +707484005,Primary adenoid squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +1080341000119105,Infiltrating lobular carcinoma of right female breast (disorder),y,descendant of concept mapped from leaf +254748009,Cutaneous fibrosarcoma (disorder),y,descendant of concept mapped from leaf +721673009,Primary malignant neuroendocrine neoplasm of appendix (disorder),y,descendant of concept mapped from leaf +93531004,Hodgkin's granuloma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +372105009,Carcinoma of supraglottis (disorder),y,descendant of concept mapped from leaf +404047004,Cutaneous leiomyosarcoma with granular cell change (disorder),y,descendant of concept mapped from leaf +1080191000119104,Infiltrating ductal carcinoma of central portion of right female breast (disorder),y,descendant of concept mapped from leaf +373083005,Malignant neoplasm of breast upper outer quadrant (disorder),y,descendant of concept mapped from leaf +707393007,Primary adenosquamous carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +93496009,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of axilla AND/OR upper limb (disorder)",y,descendant of concept mapped from leaf +402500004,Basal cell carcinoma of ala nasi (disorder),y,descendant of concept mapped from leaf +352301000119103,Primary malignant neoplasm of soft tissue of right upper extremity (disorder),y,descendant of concept mapped from leaf +94673005,Secondary malignant neoplasm of vermilion border of lip (disorder),y,descendant of concept mapped from leaf +353561000119103,Secondary malignant neoplasm of right lung (disorder),y,descendant of concept mapped from leaf +404016005,Giant cell malignant fibrous histiocytoma of skin (disorder),y,descendant of concept mapped from leaf +703625002,Kaposi sarcoma not associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +94538001,Secondary malignant neoplasm of sigmoid colon (disorder),y,descendant of concept mapped from leaf +93214005,Malignant melanoma of skin of back (disorder),y,descendant of concept mapped from leaf +93775003,Primary malignant neoplasm of duodenum (disorder),y,descendant of concept mapped from leaf +722718001,Primary malignant meningioma (disorder),y,descendant of concept mapped from leaf +372103002,Carcinoma of glottis (disorder),y,descendant of concept mapped from leaf +78411000119107,Ewing sarcoma of bone of pelvis (disorder),y,descendant of concept mapped from leaf +93974005,Primary malignant neoplasm of prostate (disorder),y,descendant of concept mapped from leaf +715414009,Familial malignant neoplasm of pancreas (disorder),y,descendant of concept mapped from leaf +735920008,Primary malignant neuroepithelial neoplasm of ciliary body (disorder),y,descendant of concept mapped from leaf +94213007,Secondary malignant neoplasm of body of penis (disorder),y,descendant of concept mapped from leaf +109970006,"Follicular non-Hodgkin's lymphoma, small cleaved cell (disorder)",y,descendant of concept mapped from leaf +443719001,Leiomyosarcoma (disorder),y,descendant of concept mapped from leaf +449386007,Philadelphia chromosome negative chronic myelogenous leukemia (disorder),y,descendant of concept mapped from leaf +92661009,Carcinoma in situ of multiple endocrine glands (disorder),y,descendant of concept mapped from leaf +402558004,Malignant melanoma (vertical growth phase) (disorder),y,descendant of concept mapped from leaf +96281000119107,Overlapping malignant neoplasm of colon and rectum (disorder),y,descendant of concept mapped from leaf +448663003,Diffuse non-Hodgkin's lymphoma of stomach (disorder),y,descendant of concept mapped from leaf +369606006,Malignant tumor involving an organ by separate metastasis from prostate (disorder),y,descendant of concept mapped from leaf +448139005,Fibrosarcoma of connective tissue (disorder),y,descendant of concept mapped from leaf +721547008,Primary adenocarcinoma of epithelium of iris (disorder),y,descendant of concept mapped from leaf +277571004,B-cell acute lymphoblastic leukemia (disorder),y,descendant of concept mapped from leaf +94414003,Secondary malignant neoplasm of middle third of esophagus (disorder),y,descendant of concept mapped from leaf +93646002,Malignant melanoma of skin of scalp (disorder),y,descendant of concept mapped from leaf +93851005,Primary malignant neoplasm of labia minora (disorder),y,descendant of concept mapped from leaf +441962003,Large cell lymphoma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +733912008,Primary intraosseous squamous cell carcinoma derived from odontogenic cyst (morphologic abnormality),y,descendant of concept mapped from leaf +421658000,"Papillary carcinoma, Warthin-like (morphologic abnormality)",y,descendant of concept mapped from leaf +699317002,Paratesticular malignant neoplasm (disorder),y,descendant of concept mapped from leaf +94711005,"Mycosis fungoides of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +94172001,Secondary malignant neoplasm of anus (disorder),y,descendant of concept mapped from leaf +109965004,"Diffuse non-Hodgkin's lymphoma, lymphoblastic (disorder)",y,descendant of concept mapped from leaf +93510002,"Hodgkin's disease, mixed cellularity of extranodal AND/OR solid organ site (disorder)",y,descendant of concept mapped from leaf +707427000,Primary verrucous carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +94670008,Secondary malignant neoplasm of vallecula (disorder),y,descendant of concept mapped from leaf +276815004,Lymphoma of intestine (disorder),y,descendant of concept mapped from leaf +716652006,Primary hepatic neuroendocrine carcinoma (disorder),y,descendant of concept mapped from leaf +93902008,Primary malignant neoplasm of muscle of head (disorder),y,descendant of concept mapped from leaf +722677008,Primary mesothelioma overlapping lesion of retroperitoneum peritoneum and omentum (disorder),y,descendant of concept mapped from leaf +94230009,Secondary malignant neoplasm of bronchus of right lower lobe (disorder),y,descendant of concept mapped from leaf +45221000119105,Primary invasive malignant neoplasm of female breast (disorder),y,descendant of concept mapped from leaf +439478008,Siewert type III adenocarcinoma of esophagogastric junction (disorder),y,descendant of concept mapped from leaf +93722002,Primary malignant neoplasm of bone of lower limb (disorder),y,descendant of concept mapped from leaf +12246561000119101,Secondary malignant neoplasm of bilateral adrenal glands (disorder),y,descendant of concept mapped from leaf +93216007,Malignant melanoma of skin of buttock (disorder),y,descendant of concept mapped from leaf +93689003,Primary malignant neoplasm of bladder (disorder),y,descendant of concept mapped from leaf +12240951000119107,Squamous cell carcinoma of left lung (disorder),y,descendant of concept mapped from leaf +449211009,Malignant epithelial neoplasm of face (disorder),y,descendant of concept mapped from leaf +372100004,Carcinoma of exocervix (disorder),y,descendant of concept mapped from leaf +240531002,African Burkitt's lymphoma (disorder),y,descendant of concept mapped from leaf +16260631000119101,Secondary malignant neoplasm of lymph node from neoplasm of female breast (disorder),y,descendant of concept mapped from leaf +94387003,Secondary malignant neoplasm of lower outer quadrant of female breast (disorder),y,descendant of concept mapped from leaf +710195004,Malignant odontogenic neoplasm of lower jaw (disorder),y,descendant of concept mapped from leaf +369538008,Malignant tumor involving left broad ligament by metastasis from ovary (disorder),y,descendant of concept mapped from leaf +93986008,Primary malignant neoplasm of respiratory tract (disorder),y,descendant of concept mapped from leaf +721304007,Refractory thrombocytopenia (disorder),y,descendant of concept mapped from leaf +423189008,Adenoid cystic carcinoma of submandibular gland (disorder),y,descendant of concept mapped from leaf +110002002,Mast cell leukemia (disorder),y,descendant of concept mapped from leaf +93498005,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of inguinal region AND/OR lower limb (disorder)",y,descendant of concept mapped from leaf +94593007,Secondary malignant neoplasm of soft tissues of shoulder (disorder),y,descendant of concept mapped from leaf +369583009,Malignant tumor involving vagina by separate metastasis from fallopian tube (disorder),y,descendant of concept mapped from leaf +254727007,Extramammary Paget's disease of skin (disorder),y,descendant of concept mapped from leaf +277604002,Acute eosinophilic leukemia (disorder),y,descendant of concept mapped from leaf +402910001,Anogenital verrucous carcinoma of Buschke-Löwenstein (disorder),y,descendant of concept mapped from leaf +277616008,Diffuse low grade B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +94044006,Primary malignant neoplasm of skin of umbilicus (disorder),y,descendant of concept mapped from leaf +109856007,Malignant mesothelioma of mesentery (disorder),y,descendant of concept mapped from leaf +93221005,Malignant melanoma of skin of elbow (disorder),y,descendant of concept mapped from leaf +94250008,Secondary malignant neoplasm of cervical vertebral column (disorder),y,descendant of concept mapped from leaf +403954003,Mixed eccrine/pilar adnexal carcinoma of skin (disorder),y,descendant of concept mapped from leaf +402815007,Squamous cell carcinoma (disorder),y,descendant of concept mapped from leaf +94646009,Secondary malignant neoplasm of trigeminal nerve (disorder),y,descendant of concept mapped from leaf +372116002,"Carcinoma of pelvic bones, sacrum and coccyx (disorder)",y,descendant of concept mapped from leaf +397080003,"Mucoepidermoid carcinoma, intermediate grade (morphologic abnormality)",y,descendant of concept mapped from leaf +94169008,Secondary malignant neoplasm of anterior two-thirds of tongue (disorder),y,descendant of concept mapped from leaf +93679002,Primary malignant neoplasm of appendix (disorder),y,descendant of concept mapped from leaf +369497003,Malignant tumor involving uterine cervix by direct extension from fallopian tube (disorder),y,descendant of concept mapped from leaf +94234000,Secondary malignant neoplasm of buccal mucosa (disorder),y,descendant of concept mapped from leaf +707358000,Primary squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +403944002,Small cell eccrine carcinoma of skin (disorder),y,descendant of concept mapped from leaf +254794007,Angiosarcoma of skin (disorder),y,descendant of concept mapped from leaf +187861000,Malignant neoplasm of upper lobe bronchus (disorder),y,descendant of concept mapped from leaf +188672005,Follicular non-Hodgkin's mixed small cleaved and large cell lymphoma (disorder),y,descendant of concept mapped from leaf +94162004,Secondary malignant neoplasm of adrenal medulla (disorder),y,descendant of concept mapped from leaf +118617000,Burkitt's lymphoma (disorder),y,descendant of concept mapped from leaf +94004004,Primary malignant neoplasm of short bone of upper limb (disorder),y,descendant of concept mapped from leaf +93948004,Primary malignant neoplasm of parietal pleura (disorder),y,descendant of concept mapped from leaf +699028006,Primitive neuroectodermal tumor (disorder),y,descendant of concept mapped from leaf +94506006,Secondary malignant neoplasm of pylorus (disorder),y,descendant of concept mapped from leaf +427038005,"Non-small cell lung cancer, negative for epidermal growth factor receptor expression (disorder)",y,descendant of concept mapped from leaf +369610009,Malignant tumor involving left fallopian tube by separate metastasis from uterine cervix (disorder),y,descendant of concept mapped from leaf +188502002,Lymphosarcoma of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +254651007,Squamous cell carcinoma of skin (disorder),y,descendant of concept mapped from leaf +94539009,Secondary malignant neoplasm of skin of abdomen (disorder),y,descendant of concept mapped from leaf +95231000,Reticulosarcoma of spleen (disorder),y,descendant of concept mapped from leaf +94105000,Primary malignant neoplasm of transverse colon (disorder),y,descendant of concept mapped from leaf +94447007,Secondary malignant neoplasm of occipital bone (disorder),y,descendant of concept mapped from leaf +94148006,Megakaryocytic leukemia in remission (disorder),y,descendant of concept mapped from leaf +254622008,Squamous cell carcinoma of bronchus (disorder),y,descendant of concept mapped from leaf +187853005,Malignant neoplasm of cartilage of trachea (disorder),y,descendant of concept mapped from leaf +722686003,Primary serous carcinoma of uterine adnexa (disorder),y,descendant of concept mapped from leaf +422378004,Squamous cell carcinoma of bridge of nose (disorder),y,descendant of concept mapped from leaf +402562005,Malignant melanoma animal-type (disorder),y,descendant of concept mapped from leaf +722511005,Primary rhabdomyosarcoma of respiratory organ (disorder),y,descendant of concept mapped from leaf +94309003,Secondary malignant neoplasm of frontal lobe (disorder),y,descendant of concept mapped from leaf +735678002,Primary chondrosarcoma of articular cartilage (disorder),y,descendant of concept mapped from leaf +94423000,Secondary malignant neoplasm of muscle of inguinal region (disorder),y,descendant of concept mapped from leaf +93709005,Primary malignant neoplasm of blood vessel of thigh (disorder),y,descendant of concept mapped from leaf +445448008,Acute myeloid leukemia with myelodysplasia-related changes (disorder),y,descendant of concept mapped from leaf +735735001,Primary malignant neuroendocrine neoplasm of pancreas (disorder),y,descendant of concept mapped from leaf +277580004,Non-secretory myeloma (disorder),y,descendant of concept mapped from leaf +427056005,Subacute leukemia in remission (disorder),y,descendant of concept mapped from leaf +400122007,Primary cutaneous T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +123313007,"Alpha heavy chain disease, enteric form (disorder)",y,descendant of concept mapped from leaf +707347009,Primary carcinoma of maxillary sinus (disorder),y,descendant of concept mapped from leaf +93186009,"Malignant histiocytosis of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +372004005,Primary malignant neoplasm of parotid gland (disorder),y,descendant of concept mapped from leaf +94589001,Secondary malignant neoplasm of soft tissues of lower limb (disorder),y,descendant of concept mapped from leaf +277579002,Light chain myeloma (disorder),y,descendant of concept mapped from leaf +404145009,Primary cutaneous anaplastic large cell B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +277573001,Common acute lymphoblastic leukemia (disorder),y,descendant of concept mapped from leaf +1671000119100,Metastasis to lymph node from squamous cell carcinoma (disorder),y,descendant of concept mapped from leaf +448952004,Infiltrating duct carcinoma of female breast (disorder),y,descendant of concept mapped from leaf +402873007,Malignant fibrohistiocytic tumor of skin (disorder),y,descendant of concept mapped from leaf +449216004,Diffuse non-Hodgkin's lymphoma of soft tissue (disorder),y,descendant of concept mapped from leaf +449416001,Malignant epithelial neoplasm of skin of anus (disorder),y,descendant of concept mapped from leaf +423424005,Mucoepidermoid carcinoma of submandibular gland (disorder),y,descendant of concept mapped from leaf +92818009,"Chronic myeloid leukemia, disease (disorder)",y,descendant of concept mapped from leaf +408646000,Adenocarcinoma of liver (disorder),y,descendant of concept mapped from leaf +93199007,Malignant lymphoma of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +402517006,Basal cell carcinoma of upper back (disorder),y,descendant of concept mapped from leaf +93514006,"Hodgkin's disease, nodular sclerosis of lymph nodes of axilla AND/OR upper limb (disorder)",y,descendant of concept mapped from leaf +93500006,"Hodgkin's disease, lymphocytic-histiocytic predominance of spleen (disorder)",y,descendant of concept mapped from leaf +734035004,Epithelial variant hepatoblastoma (morphologic abnormality),y,descendant of concept mapped from leaf +400057007,Basal cell carcinoma of pinnal sulcus (disorder),y,descendant of concept mapped from leaf +404081005,Yolk sac tumor (disorder),y,descendant of concept mapped from leaf +1082301000119109,Transitional cell carcinoma of right renal pelvis (disorder),y,descendant of concept mapped from leaf +94655007,Secondary malignant neoplasm of upper outer quadrant of female breast (disorder),y,descendant of concept mapped from leaf +371990006,Primary malignant neoplasm of gum (disorder),y,descendant of concept mapped from leaf +449419008,Follicular non-Hodgkin's lymphoma of intestine (disorder),y,descendant of concept mapped from leaf +93864006,Primary malignant neoplasm of lower lobe of left lung (disorder),y,descendant of concept mapped from leaf +93761005,Primary malignant neoplasm of colon (disorder),y,descendant of concept mapped from leaf +94157000,Secondary malignant neoplasm of acromion (disorder),y,descendant of concept mapped from leaf +1081711000119104,Primary sarcoma of left lower limb (disorder),y,descendant of concept mapped from leaf +369490001,Malignant tumor involving seminal vesicle by direct extension from prostate (disorder),y,descendant of concept mapped from leaf +94631002,Secondary malignant neoplasm of thoracic esophagus (disorder),y,descendant of concept mapped from leaf +109998009,Refractory anemia with ringed sideroblasts (disorder),y,descendant of concept mapped from leaf +254638002,Pancoast tumor (disorder),y,descendant of concept mapped from leaf +403917007,Basal cell carcinoma of temple (disorder),y,descendant of concept mapped from leaf +94614009,Secondary malignant neoplasm of supraclavicular lymph nodes (disorder),y,descendant of concept mapped from leaf +188641006,Malignant histiocytosis of lymph nodes of axilla and upper limb (disorder),y,descendant of concept mapped from leaf +93652001,Malignant melanoma of skin of umbilicus (disorder),y,descendant of concept mapped from leaf +94189009,Secondary malignant neoplasm of blood vessel of axilla (disorder),y,descendant of concept mapped from leaf +414166008,"Extranodal natural killer/T-cell lymphoma, nasal type (disorder)",y,descendant of concept mapped from leaf +449177007,Diffuse non-Hodgkin's lymphoma of bone (disorder),y,descendant of concept mapped from leaf +93776002,Primary malignant neoplasm of ectopic female breast tissue (disorder),y,descendant of concept mapped from leaf +427642009,T-cell acute lymphoblastic leukemia in remission (disorder),y,descendant of concept mapped from leaf +423691004,Malignant neoplasm of gum and contiguous sites (disorder),y,descendant of concept mapped from leaf +449293008,Sarcoma of connective tissue (disorder),y,descendant of concept mapped from leaf +188559002,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of inguinal region and lower limb (disorder)",y,descendant of concept mapped from leaf +188691005,Malignant immunoproliferative small intestinal disease (disorder),y,descendant of concept mapped from leaf +93998003,"Primary malignant neoplasm of sclera, primary (disorder)",y,descendant of concept mapped from leaf +271944004,Clear cell sarcoma (morphologic abnormality),y,descendant of concept mapped from leaf +699357004,Low grade endometrial stromal sarcoma (disorder),y,descendant of concept mapped from leaf +447792005,Chondrosarcoma of bone (disorder),y,descendant of concept mapped from leaf +94550007,Secondary malignant neoplasm of skin of elbow (disorder),y,descendant of concept mapped from leaf +404141000,Primary cutaneous immunocytoma (disorder),y,descendant of concept mapped from leaf +402514004,Basal cell carcinoma of obverse of pinna (disorder),y,descendant of concept mapped from leaf +94272005,Secondary malignant neoplasm of diaphragm (disorder),y,descendant of concept mapped from leaf +707469001,Primary non-mucinous bronchiolo-alveolar carcinoma of lung (disorder),y,descendant of concept mapped from leaf +402497005,Basal cell carcinoma of root of nose (disorder),y,descendant of concept mapped from leaf +445227008,Juvenile myelomonocytic leukemia (disorder),y,descendant of concept mapped from leaf +94505005,Secondary malignant neoplasm of pyloric antrum (disorder),y,descendant of concept mapped from leaf +93714009,Primary malignant neoplasm of blood vessel (disorder),y,descendant of concept mapped from leaf +93912001,Primary malignant neoplasm of muscle of upper limb (disorder),y,descendant of concept mapped from leaf +311779007,Malignant neoplasm of skin of scapular region (disorder),y,descendant of concept mapped from leaf +402528005,Basal cell carcinoma - keratotic (disorder),y,descendant of concept mapped from leaf +369449004,Malignant tumor involving rectum by direct extension from fallopian tube (disorder),y,descendant of concept mapped from leaf +371976008,Primary malignant neoplasm of buccal mucosa (disorder),y,descendant of concept mapped from leaf +369545008,Malignant tumor involving left fallopian tube by separate metastasis from uterus (disorder),y,descendant of concept mapped from leaf +716651004,Leiomyosarcoma of small intestine (disorder),y,descendant of concept mapped from leaf +93860002,Primary malignant neoplasm of lateral portion of floor of mouth (disorder),y,descendant of concept mapped from leaf +402818009,Basal cell carcinoma of nose (disorder),y,descendant of concept mapped from leaf +369544007,Malignant tumor involving left fallopian tube by separate metastasis from right fallopian tube (disorder),y,descendant of concept mapped from leaf +763063001,Adenoid basal carcinoma of cervix uteri (disorder),y,descendant of concept mapped from leaf +449074003,Lymphoma of small intestine (disorder),y,descendant of concept mapped from leaf +188566001,"Hodgkin's disease, nodular sclerosis of intrathoracic lymph nodes (disorder)",y,descendant of concept mapped from leaf +371993008,Primary malignant neoplasm of lacrimal gland (disorder),y,descendant of concept mapped from leaf +93767009,Primary malignant neoplasm of cranial nerve (disorder),y,descendant of concept mapped from leaf +269476000,Nodular lymphoma (disorder),y,descendant of concept mapped from leaf +188592008,"Hodgkin's disease, lymphocytic depletion of spleen (disorder)",y,descendant of concept mapped from leaf +307592006,Basophilic leukemia (disorder),y,descendant of concept mapped from leaf +93203007,Malignant mast cell tumor of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +716649003,Extraovarian primary peritoneal carcinoma (disorder),y,descendant of concept mapped from leaf +721617001,Primary adenocarcinoma of lower third of esophagus due to Barrett esophagus (disorder),y,descendant of concept mapped from leaf +733345003,Primary squamous cell carcinoma of pharynx (disorder),y,descendant of concept mapped from leaf +426248008,Aleukemic lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +1080161000119106,Infiltrating ductal carcinoma of upper outer quadrant of left female breast (disorder),y,descendant of concept mapped from leaf +254731001,Nodular malignant melanoma of skin (disorder),y,descendant of concept mapped from leaf +94426008,Secondary malignant neoplasm of muscle of pelvis (disorder),y,descendant of concept mapped from leaf +94249008,Secondary malignant neoplasm of cervical esophagus (disorder),y,descendant of concept mapped from leaf +94534004,Secondary malignant neoplasm of septum of nose (disorder),y,descendant of concept mapped from leaf +702369008,Carcinosarcoma of uterus (disorder),y,descendant of concept mapped from leaf +447782002,Malignant epithelial neoplasm of female breast (disorder),y,descendant of concept mapped from leaf +94542003,Secondary malignant neoplasm of skin of axilla (disorder),y,descendant of concept mapped from leaf +402564006,Multiple primary malignant melanomata (disorder),y,descendant of concept mapped from leaf +94200001,Secondary malignant neoplasm of blood vessel of lower limb (disorder),y,descendant of concept mapped from leaf +276738009,Primary signet ring carcinoma of skin (disorder),y,descendant of concept mapped from leaf +94243009,Secondary malignant neoplasm of central nervous system (disorder),y,descendant of concept mapped from leaf +93970001,Primary malignant neoplasm of posterior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +128858006,Central neurocytoma (morphologic abnormality),y,descendant of concept mapped from leaf +93533001,"Hodgkin's granuloma of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +763131005,Clear cell adenocarcinoma of ovary (disorder),y,descendant of concept mapped from leaf +703655009,Adenocarcinoma of rete ovarii (morphologic abnormality),y,descendant of concept mapped from leaf +404112009,Granulomatous mycosis fungoides (disorder),y,descendant of concept mapped from leaf +707391009,Primary papillary squamous cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +764855007,Acute myeloid leukemia with CCAAT/enhancer binding protein alpha somatic mutation (disorder),y,descendant of concept mapped from leaf +94323001,Secondary malignant neoplasm of hand (disorder),y,descendant of concept mapped from leaf +94097000,Primary malignant neoplasm of thyroglossal duct (disorder),y,descendant of concept mapped from leaf +424260006,Squamous cell carcinoma of nasolabial fold (disorder),y,descendant of concept mapped from leaf +447785000,Leiomyosarcoma of stomach (disorder),y,descendant of concept mapped from leaf +93523009,Hodgkin's disease of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +442771000000109,[X]Kaposi's sarcoma of multiple organs (disorder),n,via Query Table +190056002,[M]Eosinophilic leukemia NOS (morphologic abnormality),n,via Query Table +190043009,[M]Erythroleukemia NOS (morphologic abnormality),n,via Query Table +451131000000102,[M]Liposarcoma NOS (morphologic abnormality),n,via Query Table +428411000000106,[X]Secondary malignant neoplasm of other and unspecified parts of nervous system (disorder),n,via Query Table +190033006,[M]Lymphoid leukemias (morphologic abnormality),n,via Query Table +662451000000101,Sézary's disease NOS (disorder),n,via Query Table +478881000000100,[X]Malignant neoplasm of overlapping lesion of other and ill-defined sites (disorder),n,via Query Table +565591000000106,Secondary and unspecified malignant neoplasm of posterior mediastinal lymph nodes (disorder),n,via Query Table +414711000000102,[X]Malignant neoplasm overlapping lesion of skin,n,via Query Table +189687009,"[M]Papillary cystadenocarcinoma, NOS (morphologic abnormality)",n,via Query Table +566531000000103,"Malignant neoplasm of oropharynx, other specified sites (disorder)",n,via Query Table +15118008,AIDS with reticulosarcoma (disorder),n,via Query Table +549571000000103,"Malignant neoplasm of bone, connective tissue, skin and breast NOS (disorder)",n,via Query Table +543371000000108,Malignant neoplasm of nose NOS (disorder),n,via Query Table +462711000000105,"[X]Malignant neoplasm of connective and soft tissue, unspecified (disorder)",n,via Query Table +397621000000100,[M]Large cell carcinoma NOS (morphologic abnormality),n,via Query Table +189606002,[M]Solid carcinoma NOS (morphologic abnormality),n,via Query Table +573361000000100,"Unspecified malignant neoplasm of lymphoid and histiocytic tissue of lymph nodes of head, face and neck (disorder)",n,via Query Table +657351000000103,Ca rectum + Ca anus NOS (disorder),n,via Query Table +634961000000107,Malignant neoplasm of small intestine NOS (disorder),n,via Query Table +390391000000109,"[X]Mesothelioma, unspecified (disorder)",n,via Query Table +833111000000100,Refractory anaemia with multilineage dysplasia,n,via Query Table +427141000000104,[M]Chondromatous neoplasms (morphologic abnormality),n,via Query Table +462341000000107,"[X]Malignant neoplasm of ill-defined, secondary and unspecified sites (disorder)",n,via Query Table +411991000000107,[M]Hairy naevus NOS (morphologic abnormality),n,via Query Table +578331000000104,Malignant neoplasm of connective and soft tissue of abdomen NOS (disorder),n,via Query Table +189624000,[M]Villous adenomas and adenocarcinomas (morphologic abnormality),n,via Query Table +189672004,[M]Ceruminous adenoma and adenocarcinoma (morphologic abnormality),n,via Query Table +449891000000106,[M]Mixed cell adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +190122006,[X]Malignant neoplasm of female genital organs (disorder),n,via Query Table +420441000000109,[M]Acute myelofibrosis (morphologic abnormality),n,via Query Table +538081000000104,Secondary and unspecified malignant neoplasm of inguinal and lower limb lymph nodes (disorder),n,via Query Table +552141000000106,Malignant neoplasm of specified parts of peritoneum NOS (disorder),n,via Query Table +426721000000108,[M]Pancreatic adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +93148000,"Leukemic reticuloendotheliosis of lymph nodes of head, face AND/OR neck (disorder)",n,via Query Table +91859000,"Acute monocytic leukemia, FAB M5 (disorder)",n,via Query Table +556071000000103,Other specified reticulosarcoma or lymphosarcoma (disorder),n,via Query Table +437751000000102,[M]Mucinous cystadenocarcinoma NOS (morphologic abnormality),n,via Query Table +575511000000109,Malignant neoplasm of long bones of leg NOS (disorder),n,via Query Table +188196004,Malignant neoplasm of lower uterine segment (disorder),n,via Query Table +190004005,[M]Mycosis fungoides NOS (morphologic abnormality),n,via Query Table +463391000000108,[M]Precancerous melanosis NOS (morphologic abnormality),n,via Query Table +189882001,[M] Small cell osteosarcoma (morphologic abnormality),n,via Query Table +536201000000102,Secondary and unspecified malignant neoplasm of axillary lymph nodes (disorder),n,via Query Table +187775000,Malignant neoplasm of intrahepatic biliary passages (disorder),n,via Query Table +541711000000100,Secondary malignant neoplasm of large intestine or rectum NOS (disorder),n,via Query Table +189850004,[M]Strumal neoplasms (morphologic abnormality),n,via Query Table +408791000000100,[M]Leiomyosarcoma NOS (morphologic abnormality),n,via Query Table +409651000000108,"[M]Carcinoma, anaplastic type, NOS (morphologic abnormality)",n,via Query Table +188523008,"Hodgkin's paragranuloma of lymph nodes of head, face, and neck (disorder)",n,via Query Table +461431000000101,[M]Signet ring carcinoma NOS (morphologic abnormality),n,via Query Table +470351000000104,[M]Polycythemia vera (morphologic abnormality),n,via Query Table +46347006,Squamous cell carcinoma of horn (morphologic abnormality),n,via Query Table +408881000000106,[M]Cystadenocarcinoma NOS (morphologic abnormality),n,via Query Table +189702009,[M]Signet ring carcinoma NOS (morphologic abnormality),n,via Query Table +190111007,[X]Kaposi's sarcoma of multiple organs (disorder),n,via Query Table +567711000000101,"Malignant neoplasm of upper lip, vermilion border NOS (disorder)",n,via Query Table +248455008,Pheochromocytoma storm (finding),n,via Query Table +425531000000108,"[X]Malignant neoplasm of connective and soft tissue of trunk, unspecified (disorder)",n,via Query Table +189806000,[M]Mesenchymal nephroblastoma (morphologic abnormality),n,via Query Table +292551000000103,[M] Refractory anaemia with excess of blasts,n,via Query Table +276499003,[M]Hairy nevus NOS (morphologic abnormality),n,via Query Table +556041000000109,Malignant neoplasm of pancreas NOS (disorder),n,via Query Table +389871000000106,[M]Burkitt's tumours (morphologic abnormality),n,via Query Table +190013007,[M]Angioendotheliomatosis (morphologic abnormality),n,via Query Table +408381000000103,[M]Carcinoid tumours NOS (morphologic abnormality),n,via Query Table +396181000000106,[X]Melanoma and other malignant neoplasms of skin (disorder),n,via Query Table +534671000000104,Malignant neoplasm of fixed part of tongue NOS (disorder),n,via Query Table +578171000000100,Malignant neoplasm of extrahepatic bile ducts NOS (disorder),n,via Query Table +189933000,[M]Neuroepithelioma NOS (morphologic abnormality),n,via Query Table +401123009,Cancer care review (regime/therapy),n,via Query Table +538031000000103,Secondary and unspecified malignant neoplasm of axilla and upper limb lymph nodes (disorder),n,via Query Table +408851000000100,[M]Adenocarcinoma in villous adenoma (morphologic abnormality),n,via Query Table +575491000000101,Malignant neoplasm of hand bones NOS (disorder),n,via Query Table +833341000000102,Follicular lymphoma grade 1,n,via Query Table +189576006,[M]Transitional cell carcinoma NOS (morphologic abnormality),n,via Query Table +557141000000108,Malignant neoplasm of heart NOS (disorder),n,via Query Table +187852000,"Malignant neoplasm of trachea, bronchus and lung (disorder)",n,via Query Table +634911000000105,Malignant neoplasm of other specified site of stomach (disorder),n,via Query Table +189670007,[M]Sebaceous adenoma and adenocarcinoma (morphologic abnormality),n,via Query Table +477501000000108,[M]Solid carcinoma NOS (morphologic abnormality),n,via Query Table +190075007,[M]Monocytoid B-cell lymphoma (morphologic abnormality),n,via Query Table +549551000000107,Malignant neoplasm of male breast NOS (disorder),n,via Query Table +95258007,Sézary's disease of intrathoracic lymph nodes (disorder),n,via Query Table +833401000000105,[M]Letterer - Siwe disease,n,via Query Table +462401000000104,"[X]Malignant neoplasms of lymphoid, haematopoietic and related tissue (disorder)",n,via Query Table +409571000000100,"[X]Diffuse non-Hodgkin's lymphoma, unspecified (disorder)",n,via Query Table +832561000000100,Malignant tumour of unknown origin,n,via Query Table +579281000000102,Malignant neoplasm of genitourinary organ NOS (disorder),n,via Query Table +832691000000107,Heavy chain disease,n,via Query Table +464771000000108,"[X]Other specified malignant neoplasms of lymphoid, haematopoietic and related tissue (disorder)",n,via Query Table +832671000000108,B-cell prolymphocytic leukaemia,n,via Query Table +26328002,Disseminated eosinophilic collagen disease (disorder),n,via Query Table +462371000000101,"[X]Refractory anemia, unspecified (disorder)",n,via Query Table +450851000000105,[M]Sweat gland adenoma and adenocarcinomas (morphologic abnormality),n,via Query Table +134174002,Malignant meningioma (morphologic abnormality),n,via Query Table +409701000000100,[X]Secondary malignant neoplasm of bladder and other and unspecified urinary organs (disorder),n,via Query Table +419641000000108,"[X]Kaposi's sarcoma, unspecified (disorder)",n,via Query Table +396651000000108,[M]Angiomyoliposarcoma (morphologic abnormality),n,via Query Table +189510008,Refractory anemia with sideroblasts (disorder),n,via Query Table +478131000000106,[X]Malignant neoplasm of breast (disorder),n,via Query Table +190050008,[M]Neutrophilic leukemia (morphologic abnormality),n,via Query Table +421835000,Immunoblastic lymphoma associated with acquired immunodeficiency syndrome (disorder),n,via Query Table +450201000000108,[M]Cerebellar sarcoma NOS (morphologic abnormality),n,via Query Table +402761000000108,"[X]Refractory anaemia, unspecified",n,via Query Table +549541000000109,Malignant neoplasm of other site of male breast (disorder),n,via Query Table +190146004,[X]Secondary malignant neoplasm of other and unspecified digestive organs (disorder),n,via Query Table +666541000000104,Malignant neoplasm of nasal cavities NOS (disorder),n,via Query Table +778101000000109,Pigmented basal cell carcinoma,n,via Query Table +833481000000100,[M]Adult T-cell leukaemia/lymphoma,n,via Query Table +833581000000104,Non-Hodgkin's lymphoma - disorder,n,via Query Table +634951000000109,Malignant neoplasm of stomach NOS (disorder),n,via Query Table +189912009,"[M]Choroid plexus papilloma, malignant (morphologic abnormality)",n,via Query Table +409171000000109,[X]Malignant neoplasm of urinary tract (disorder),n,via Query Table +534781000000105,Malignant neoplasm of hypopharynx NOS (disorder),n,via Query Table +438351000000100,[M]Cystadenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +404146005,Primary cutaneous diffuse large cell B-cell lymphoma of the leg (disorder),n,via Query Table +451121000000104,[M]Mucinous adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +564911000000107,Malignant neoplasm of inguinal region NOS (disorder),n,via Query Table +634611000000102,Myeloid leukemia NOS (disorder),n,via Query Table +537961000000106,Malignant neoplasm of floor of mouth NOS (disorder),n,via Query Table +833451000000106,"Chronic myelogenous leukaemia, BCR/ABL positive",n,via Query Table +432082001,Non-seminomatous malignant neoplasm of testis (disorder),n,via Query Table +534691000000100,Malignant neoplasm of retroperitoneum and peritoneum NOS (disorder),n,via Query Table +467201000000100,[X]Other sarcomas of the liver (disorder),n,via Query Table +555741000000104,Malignant histiocytosis of unspecified site (disorder),n,via Query Table +424621000000108,"[X]Malignant neoplasm of meninges, unspecified (disorder)",n,via Query Table +396611000000109,[X]Malignant neoplasm of overlapping lesion of bone and articular cartilage (disorder),n,via Query Table +422052002,Burkitt's lymphoma associated with acquired immunodeficiency syndrome (disorder),n,via Query Table +400094003,Acquired melanocytic nevus (morphologic abnormality),n,via Query Table +91113000,Avian sarcoma (disorder),n,via Query Table +175621000000105,Cancer pain and symptom management,n,via Query Table +566551000000105,Malignant neoplasm of oropharynx NOS (disorder),n,via Query Table +190145000,[X]Secondary malignant neoplasm of other and unspecified respiratory organs (disorder),n,via Query Table +546321000000103,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of lymph nodes of multiple sites (disorder),n,via Query Table +189777004,[M]Liposarcoma NOS (morphologic abnormality),n,via Query Table +572591000000105,Malignant neoplasm of other site of female breast (disorder),n,via Query Table +419471000000104,[M]Lymphosarcoma cell leukaemia,n,via Query Table +134181009,[M] Immunoproliferative small intestinal disease (morphologic abnormality),n,via Query Table +186723002,Human immunodeficiency virus disease resulting in Burkitt's lymphoma (disorder),n,via Query Table +189713007,[M]Lobular carcinoma NOS (morphologic abnormality),n,via Query Table +359777006,Metastatic malignant neoplasm to brachial lymph nodes (disorder),n,via Query Table +189667008,[M]Sweat gland adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +425951000000108,[X]Other and unspecified peripheral and cutaneous T-cell lymphomas (disorder),n,via Query Table +634641000000101,Monocytic leukemia NOS (disorder),n,via Query Table +189928004,[M]Ganglioneuromatous neoplasms (morphologic abnormality),n,via Query Table +188528004,Hodgkin's paragranuloma of lymph nodes of inguinal region and lower limb (disorder),n,via Query Table +815141000000109,"Follicular lymphoma, cutaneous follicle centre (morphologic abnormality)",n,via Query Table +555761000000103,Letterer-Siwe disease of unspecified sites (disorder),n,via Query Table +269466003,Malignant tumor of bone and articular cartilage (disorder),n,via Query Table +448673001,Malignant mixed Mullerian tumor of uterus (disorder),n,via Query Table +543381000000105,Malignant neoplasm of jaw NOS (disorder),n,via Query Table +478871000000102,[M]Medulloepithelioma NOS (morphologic abnormality),n,via Query Table +534831000000100,Malignant neoplasm of pylorus of stomach NOS (disorder),n,via Query Table +573671000000104,Malignant neoplasm of uterine adnexa NOS (disorder),n,via Query Table +112684005,Mesodermal mixed tumor (morphologic abnormality),n,via Query Table +396771000000108,"[X]Malignant neoplasm of uterine adnexa, unspecified (disorder)",n,via Query Table +371985008,Primary malignant neoplasm of extrahepatic bile ducts (disorder),n,via Query Table +190229005,"[X]Myelodysplastic syndrome, unspecified (disorder)",n,via Query Table +134182002,[M]Polycythemia vera (morphologic abnormality),n,via Query Table +833531000000103,"Extranodal natural killer/T-cell lymphoma, nasal type",n,via Query Table +190167004,[X]Unspecified B-cell non-Hodgkin's lymphoma (disorder),n,via Query Table +559181000000106,Malignant neoplasm of posterior wall of nasopharynx NOS (disorder),n,via Query Table +478041000000103,"[X]Malignant neoplasm of mediastinum, part unspecified (disorder)",n,via Query Table +543361000000101,Malignant neoplasm of cheek NOS (disorder),n,via Query Table +396131000000107,[X]Malignant neoplasm of other and unspecified cranial nerves (disorder),n,via Query Table +337241000000104,Clark melanoma level 3,n,via Query Table +190127000,[X]Malignant neoplasm of male genital organs (disorder),n,via Query Table +189626003,[M]Adenocarcinoma in villous adenoma (morphologic abnormality),n,via Query Table +277648007,Angiocentric T-cell lymphoma (disorder),n,via Query Table +471231000000108,"[M]Malignant lymphoma, mixed lymphocytic - histiocytic NOS (& [diffuse reticulolymphosarcoma])",n,via Query Table +428031000000108,"[M]Mixed tumor, malignant, NOS (morphologic abnormality)",n,via Query Table +439291000000106,[M]Neuroepitheliomatous neoplasm NOS (morphologic abnormality),n,via Query Table +450051000000104,[X]Other types of follicular non-Hodgkin's lymphoma (disorder),n,via Query Table +857651000000102,Local recurrence of malignant tumour of breast,n,via Query Table +189926000,[M]Glioma NOS (morphologic abnormality),n,via Query Table +558011000000107,Secondary and unspecified malignant neoplasm of intrathoracic lymph nodes (disorder),n,via Query Table +569301000000105,Secondary and unspecified malignant neoplasm of submandibular lymph nodes (disorder),n,via Query Table +409831000000100,[M]Ceruminous adenoma and adenocarcinoma (morphologic abnormality),n,via Query Table +189663007,[M]Sweat gland adenoma and adenocarcinomas (morphologic abnormality),n,via Query Table +190025005,[M]leukemia NOS (morphologic abnormality),n,via Query Table +189669006,[M]Apocrine adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +312939009,Ocular lymphoma (disorder),n,via Query Table +541661000000108,Secondary and unspecified malignant neoplasm of intrapelvic lymph nodes NOS (disorder),n,via Query Table +396801000000106,[M]Sarcoma NOS (morphologic abnormality),n,via Query Table +1054001000000101,Invasive carcinoma of uterine cervix co-occurrent with human immunodeficiency virus infection (disorder),n,via Query Table +461841000000107,"[M]No microscopic confirmation of tumor, clinically malignant (morphologic abnormality)",n,via Query Table +549601000000105,Malignant neoplasm of endocervix NOS (disorder),n,via Query Table +561591000000109,Malignant neoplasm of eye NOS (disorder),n,via Query Table +449741000000108,"[M]Mesothelioma, unspecified (morphologic abnormality)",n,via Query Table +833571000000101,Angioimmunoblastic lymphadenopathy with dysproteinaemia,n,via Query Table +556021000000102,Malignant neoplasm of other gallbladder and extrahepatic bile ducts (disorder),n,via Query Table +477861000000105,"[X]Malignant neoplasm of bones and articular cartilage of limb, unspecified (disorder)",n,via Query Table +190038002,[M]Plasma cell leukemias (morphologic abnormality),n,via Query Table +188434008,Secondary malignant neoplasm of other respiratory organs (disorder),n,via Query Table +408811000000104,[M]Adenomatous or adenocarcinomatous polyp NOS (morphologic abnormality),n,via Query Table +189747005,[M]Nevi and melanomas (morphologic abnormality),n,via Query Table +191333009,Essential thrombocytosis (disorder),n,via Query Table +269567005,Ca trachea/bronchus/lung NOS (disorder),n,via Query Table +439271000000107,[M]Mucinous adenoma and adenocarcinoma (morphologic abnormality),n,via Query Table +396761000000101,[M]Tubular adenomas and adenocarcinomas (morphologic abnormality),n,via Query Table +338011000000108,Mucosa-associated lymphoma,n,via Query Table +461891000000102,[M]Plasma cell leukaemia NOS (morphologic abnormality),n,via Query Table +467071000000100,"[X]Malignant neoplasm, overlapping lesion of brain and other part of central nervous system (disorder)",n,via Query Table +190040007,[M]Erythroleukemias (morphologic abnormality),n,via Query Table +397451000000107,"[X]Malignant neoplasm of lymphoid, haematopoietic and related tissue, unspecified (disorder)",n,via Query Table +615441000000105,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of lymph nodes of inguinal region and lower limb (disorder),n,via Query Table +534821000000102,Malignant neoplasm of cardia of stomach NOS (disorder),n,via Query Table +561471000000109,Malignant neoplasm tonsil NOS (disorder),n,via Query Table +734069003,Malignant peripheral nerve sheath neoplasm with perineurial differentiation (morphologic abnormality),n,via Query Table +479011000000106,[M]Retinoblastomas (morphologic abnormality),n,via Query Table +634921000000104,Malignant neoplasm of anterior wall of stomach NEC (disorder),n,via Query Table +189587003,[M]Pancreatic adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +477541000000106,[X]Other myeloid leukaemia (morphologic abnormality),n,via Query Table +833001000000103,Diffuse follicle centre lymphoma,n,via Query Table +95259004,Sézary's disease of lymph nodes of axilla AND/OR upper limb (disorder),n,via Query Table +437821000000100,[M]Small cell carcinoma NOS (morphologic abnormality),n,via Query Table +413961000000100,[X]Other specified carcinomas of liver (disorder),n,via Query Table +557101000000105,"Malignant neoplasm of lower lobe, bronchus or lung NOS (disorder)",n,via Query Table +408871000000109,[M]Cystadenoma and carcinoma (morphologic abnormality),n,via Query Table +424771000000103,[M]Comedocarcinoma NOS (morphologic abnormality),n,via Query Table +463371000000109,"[M]Carcinoid tumor, nonargentaffin, malignant (morphologic abnormality)",n,via Query Table +833441000000108,"Atypical chronic myeloid leukaemia, BCR/ABL negative",n,via Query Table +533371000000109,Malignant neoplasm of cervix uteri NOS (disorder),n,via Query Table +390271000000100,[X]Malignant neoplasm overlapping lesion of skin (disorder),n,via Query Table +189802003,"[M]Mixed tumor, malignant, NOS (morphologic abnormality)",n,via Query Table +84290008,Epithelioid hemangioendothelioma (morphologic abnormality),n,via Query Table +93965008,Primary malignant neoplasm of placenta (disorder),n,via Query Table +669301000000101,Malignant neoplasm of esophagus NOS (disorder),n,via Query Table +189797009,[M]Myoma or myosarcoma NOS (morphologic abnormality),n,via Query Table +389361000000109,[M]Erythroleukemias (morphologic abnormality),n,via Query Table +634971000000100,Malignant neoplasm of other specified sites of colon (disorder),n,via Query Table +190023003,[M]Burkitt's tumor NOS (morphologic abnormality),n,via Query Table +419427007,Primary cutaneous large B-cell lymphoma of the leg (morphologic abnormality),n,via Query Table +438401000000106,[M]Blue naevus NOS (morphologic abnormality),n,via Query Table +461901000000101,"[X]Malignant melanoma of skin, unspecified (disorder)",n,via Query Table +190222001,[X]Neoplasm of uncertain and unknown behavior of other myelodysplastic syndromes (disorder),n,via Query Table +557691000000106,Burkitt's lymphoma of unspecified site (disorder),n,via Query Table +537911000000109,Malignant neoplasm of other major salivary glands (disorder),n,via Query Table +462951000000106,[M]Hepatobiliary adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +190110008,"[X]Mesothelioma, unspecified (disorder)",n,via Query Table +189765009,[M]Sarcomatosis NOS (morphologic abnormality),n,via Query Table +477471000000101,[M]Mesothelial neoplasms (morphologic abnormality),n,via Query Table +462381000000104,[M]Carcinoid tumour NOS (morphologic abnormality),n,via Query Table +285766002,Acute myeloblastic leukemia without maturation (disorder),n,via Query Table +833391000000107,Cutaneous follicle centre lymphoma,n,via Query Table +455551000000102,[M]Dermatofibrosarcoma NOS (qualifier value),n,via Query Table +867941000000102,[M]Juvenile myelomonocytic leukaemia ,n,via Query Table +188561006,"Hodgkin's, lymphocytic-histiocytic predominance of spleen (disorder)",n,via Query Table +579221000000103,Malignant neoplasm of connective and soft tissue of hip and lower limb NOS (disorder),n,via Query Table +542881000000106,Secondary and unspecified malignant neoplasm of superficial parotid lymph nodes (disorder),n,via Query Table +480061000000108,[M]Chondroma NOS (morphologic abnormality),n,via Query Table +543411000000107,Malignant neoplasm of supraclavicular fossa NOS (disorder),n,via Query Table +698161000000105,Ca skin - other NOS (disorder),n,via Query Table +553641000000108,Secondary and unspecified malignant neoplasm of intercostal lymph nodes (disorder),n,via Query Table +190008008,[M] Peripheral T-cell lymphoma NOS (morphologic abnormality),n,via Query Table +539581000000102,"Hodgkin's disease, lymphocytic depletion NOS (disorder)",n,via Query Table +702741000000102,Secondary carcinoma of other specified sites (disorder),n,via Query Table +190080003,"[M]No microscopic confirmation of tumor, clinically metastatic (morphologic abnormality)",n,via Query Table +437761000000104,[X]Other lymphoid leukaemia (disorder),n,via Query Table +189590009,[M]Hepatobiliary tract adenomas and carcinomas (morphologic abnormality),n,via Query Table +634601000000104,Other myeloid leukemia NOS (disorder),n,via Query Table +190149006,[X]Secondary malignant neoplasm of other specified sites (disorder),n,via Query Table +442591000000102,[M]Malignant melanoma NOS (morphologic abnormality),n,via Query Table +635021000000104,Primary malignant neoplasm of liver NOS (disorder),n,via Query Table +389881000000108,[M]Mesothelial neoplasm NOS (morphologic abnormality),n,via Query Table +277600006,Acute myeloblastic leukemia (disorder),n,via Query Table +189840000,[M]Seminomas (morphologic abnormality),n,via Query Table +875381000000107,[M]Peripheral neuroectodermal tumour,n,via Query Table +189562005,[M]Papillary carcinoma NOS (morphologic abnormality),n,via Query Table +472871000000100,[M] Gamma heavy chain disease (morphologic abnormality),n,via Query Table +189790006,[M]Leiomyosarcoma NOS (morphologic abnormality),n,via Query Table +757831000000107,Grade 1 (Stage pTa) papillary urothelial/transitional cell carcinoma,n,via Query Table +666501000000102,Malignant neoplasm of tongue NOS (disorder),n,via Query Table +425251000000104,"[M]Choroid plexus papilloma, malignant (morphologic abnormality)",n,via Query Table +659491000000109,"Meckel's diverticulum, unspecified (disorder)",n,via Query Table +271385002,"[X]Non-Hodgkin's lymphoma, unspecified type (disorder)",n,via Query Table +534791000000107,"Malignant neoplasm of lip, oral cavity and pharynx NOS (disorder)",n,via Query Table +533951000000104,Secondary malignant neoplasm of skin NOS (disorder),n,via Query Table +403948004,Vulval Paget's disease (disorder),n,via Query Table +670121000000109,Secondary nodes NOS (disorder),n,via Query Table +94031001,Primary malignant neoplasm of skin of leg (disorder),n,via Query Table +477571000000100,[M]Clear cell adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +557171000000102,Malignant neoplasm of other and ill-defined sites within the respiratory and intrathoracic organs (disorder),n,via Query Table +438231000000101,"[X]Malignant neoplasm of female genital organ, unspecified (disorder)",n,via Query Table +425541000000104,[M] Large cell lymphoma (morphologic abnormality),n,via Query Table +833511000000106,True histiocytic lymphoma,n,via Query Table +189608001,[M]Carcinoid tumor NOS (morphologic abnormality),n,via Query Table +833691000000101,Hypereosinophilic syndrome,n,via Query Table +190100004,"[X]Malignant neoplasm of bones and articular cartilage of limb, unspecified (disorder)",n,via Query Table +541121000000107,Secondary and unspecified malignant neoplasm of superficial mesenteric lymph nodes (disorder),n,via Query Table +189709000,[M]Comedocarcinoma NOS (morphologic abnormality),n,via Query Table +190045002,[M]Lymphosarcoma cell leukemia (morphologic abnormality),n,via Query Table +411561000000109,"[X]Kaposi's sarcoma, unspecified (disorder)",n,via Query Table +408281000000107,[X]Other malignant immunoproliferative diseases (disorder),n,via Query Table +450981000000106,[M]leukemia NOS (morphologic abnormality),n,via Query Table +565911000000106,Malignant lymphoma NOS of intra-abdominal lymph nodes (disorder),n,via Query Table +449731000000104,[M]Nevi or melanoma NOS (morphologic abnormality),n,via Query Table +93212009,Malignant melanoma of skin of arm (disorder),n,via Query Table +408491000000105,[M]Endometrioid adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +89277004,Noninfiltrating intracystic carcinoma (morphologic abnormality),n,via Query Table +556171000000104,Secondary malignant neoplasm of other part of nervous system (disorder),n,via Query Table +190141009,"[X]Malignant neoplasm of ill-defined, secondary and unspecified sites (disorder)",n,via Query Table +541701000000102,Secondary malignant neoplasm of small intestine or duodenum NOS (disorder),n,via Query Table +255116009,Secondary carcinoma of respiratory and/or digestive systems (disorder),n,via Query Table +188521005,Hodgkin's paragranuloma (disorder),n,via Query Table +397421000000102,[M]Ganglioneuromatous neoplasm NOS (morphologic abnormality),n,via Query Table +573471000000101,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of spleen (disorder),n,via Query Table +550101000000109,Malignant neoplasm of trachea NOS (disorder),n,via Query Table +663631000000101,"Malignant neoplasm of lower lip, vermilion border NOS (disorder)",n,via Query Table +1025781000000106,Recurrent squamous cell carcinoma (disorder),n,via Query Table +956461000000105,Malignant Melanoma Stage IIIB ,n,via Query Table +478091000000108,[M]Brenner tumour NOS (morphologic abnormality),n,via Query Table +188527009,Hodgkin's paragranuloma of lymph nodes of axilla and upper limb (disorder),n,via Query Table +663641000000105,"Malignant neoplasm of upper lip, inner aspect NOS (disorder)",n,via Query Table +440781000000105,[M]Glioblastoma NOS (morphologic abnormality),n,via Query Table +189843003,[M]Embryonal carcinoma NOS (morphologic abnormality),n,via Query Table +438191000000105,[X]Malignant neoplasm of other specified sites (disorder),n,via Query Table +269468002,Malignant neoplasm of short bones of leg (disorder),n,via Query Table +666481000000106,Malignant neoplasm of anterior 2/3 of tongue unspecified (disorder),n,via Query Table +337691000000107,Clark melanoma level 4,n,via Query Table +42215000,Solitary osseous myeloma (disorder),n,via Query Table +455391000000100,[M]Hodgkin's disease NOS (& [lymphogranuloma malignant]),n,via Query Table +478231000000103,"[M]No microscopic confirmation of tumor, clinically metastatic (morphologic abnormality)",n,via Query Table +396821000000102,"[X]Malignant neoplasm - pluriglandular involvement, unspecified (disorder)",n,via Query Table +414451000000109,[X]Other and unspecified peripheral and cutaneous T-cell lymphomas,n,via Query Table +190108006,[X]Malignant neoplasm of mesothelial and soft tissue (disorder),n,via Query Table +77865003,AIDS with Kaposi's sarcoma (disorder),n,via Query Table +540311000000106,Malignant neoplasm of skin NOS (disorder),n,via Query Table +540261000000104,Malignant neoplasm of scalp or skin of neck NOS (disorder),n,via Query Table +687931000000101,Lymphoid and histiocytic malignancy NOS (disorder),n,via Query Table +698181000000101,Ca cervix uteri NOS (disorder),n,via Query Table +559881000000101,Malignant neoplasm of anterior wall of nasopharynx NOS (disorder),n,via Query Table +570621000000109,Malignant neoplasm of labia majora NOS (disorder),n,via Query Table +533391000000108,Malignant neoplasm of isthmus of uterine body NOS (disorder),n,via Query Table +573661000000106,Malignant neoplasm of scapula and long bones of upper arm NOS (disorder),n,via Query Table +468691000000106,[M]Other myeloid leukaemia NOS (morphologic abnormality),n,via Query Table +189699002,[M]Mucinous adenoma and adenocarcinoma (morphologic abnormality),n,via Query Table +541741000000104,Secondary malignant neoplasm of other urinary organs (disorder),n,via Query Table +536941000000107,Secondary and unspecified malignant neoplasm of obturator lymph nodes (disorder),n,via Query Table +832531000000105,Juvenile myelomonocytic leukaemia,n,via Query Table +190120003,[X]Kaposi's sarcoma of other sites (disorder),n,via Query Table +189976003,[M]Malignant lymphomatous polyposis (morphologic abnormality),n,via Query Table +189993003,"Lymphoma, nodular or follicular (morphologic abnormality)",n,via Query Table +770531000000106,Pigmented basal cell carcinoma (morphologic abnormality),n,via Query Table +634981000000103,"Malignant neoplasm of other sites of rectum, rectosigmoid junction and anus (disorder)",n,via Query Table +427151000000101,[M]Chondrosarcoma NOS (morphologic abnormality),n,via Query Table +397141000000100,"[X]Malignant neoplasm of eye, brain and other parts of central nervous system (disorder)",n,via Query Table +189603005,[M]Tubular adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +543401000000105,Malignant neoplasm of neck NOS (disorder),n,via Query Table +478211000000106,[M]Spongioblastoma NOS (morphologic abnormality),n,via Query Table +572201000000101,Hodgkin's sarcoma of unspecified site (disorder),n,via Query Table +443501000000104,[M]Subacute myeloid leukaemia (disorder),n,via Query Table +189596003,[M]Adenomatous and adenocarcinomatous polyps (morphologic abnormality),n,via Query Table +704441000000101,"Malignant neoplasm of lip, unspecified (disorder)",n,via Query Table +396161000000102,[M] Epithelioid haemangioendothelioma NOS (morphologic abnormality),n,via Query Table +546871000000108,Malignant melanoma of other specified skin site (disorder),n,via Query Table +734933008,Malignant pigmented skin lesion (finding),n,via Query Table +559871000000103,Malignant neoplasm of lateral wall of nasopharynx NOS (disorder),n,via Query Table +395671000000107,[M] Alpha heavy chain disease (morphologic abnormality),n,via Query Table +535821000000103,Secondary and unspecified malignant neoplasm of bronchopulmonary lymph nodes (disorder),n,via Query Table +815271000000105,"Chronic myeloid leukaemia, BCR/ABL-positive (morphologic abnormality)",n,via Query Table +833081000000108,"Refractory anaemia without sideroblasts, so stated",n,via Query Table +189627007,[M]Villous adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +189756002,[M]Spindle cell melanoma NOS (morphologic abnormality),n,via Query Table +537921000000103,Malignant neoplasm of major salivary gland NOS (disorder),n,via Query Table +956481000000101,Malignant Melanoma Stage IIIC ,n,via Query Table +188623003,Mycosis fungoides of lymph nodes of axilla and upper limb (disorder),n,via Query Table +95257002,Sézary's disease of intrapelvic lymph nodes (disorder),n,via Query Table +449751000000106,[M]Angioendotheliomatosis (morphologic abnormality),n,via Query Table +189615009,[M]Carcinoid tumors NOS (morphologic abnormality),n,via Query Table +189757006,[M]Blue nevus NOS (morphologic abnormality),n,via Query Table +462391000000102,[X]Secondary malignant neoplasm of other specified sites (disorder),n,via Query Table +396781000000105,[M]Villous adenomas and adenocarcinomas (morphologic abnormality),n,via Query Table +635031000000102,Malignant neoplasm of intrahepatic bile ducts NOS (disorder),n,via Query Table +271486002,Acute erythremia and erythroleukemia (disorder),n,via Query Table +409231000000104,[X]Malignant neoplasm of mesothelial and soft tissue (disorder),n,via Query Table +189563000,[M]Verrucous carcinoma NOS (morphologic abnormality),n,via Query Table +416274001,Primary malignant clear cell tumor of ovary (disorder),n,via Query Table +833601000000108,Non-Hodgkin's lymphoma - disorder,n,via Query Table +94377002,Secondary malignant neoplasm of leg (disorder),n,via Query Table +543431000000104,Malignant neoplasm of axilla NOS (disorder),n,via Query Table +579251000000108,Malignant neoplasm of urinary bladder NOS (disorder),n,via Query Table +571181000000107,Myeloid sarcoma NOS (disorder),n,via Query Table +443641000000102,[M]Subacute lymphoid leukaemia,n,via Query Table +368681000000101,Siewert type II adenocarcinoma ,n,via Query Table +579211000000109,"Malignant neoplasm of penis, part unspecified (disorder)",n,via Query Table +396491000000102,[M]Follicular adenocarcinoma NOS (morphologic abnormality),n,via Query Table +450991000000108,"[X]Malignant neoplasm of peritoneum, unspecified (disorder)",n,via Query Table +541671000000101,Secondary and unspecified malignant neoplasm of lymph nodes in multiple sites (disorder),n,via Query Table +426031000000107,[M]Clear cell adenomas and adenocarcinomas (morphologic abnormality),n,via Query Table +408861000000102,[M]Papillary adenocarcinoma NOS (morphologic abnormality),n,via Query Table +662421000000106,Acute leukemia NOS (disorder),n,via Query Table +834561000000106,Benign fibroma of prostate,n,via Query Table +190028007,[M]Aleukemic leukemia NOS (morphologic abnormality),n,via Query Table +190137005,"[X]Malignant neoplasm, overlapping lesion of brain and other part of central nervous system (disorder)",n,via Query Table +189932005,[M]Medulloepithelioma NOS (morphologic abnormality),n,via Query Table +449791000000103,[M]Basal cell carcinoma NOS (morphologic abnormality),n,via Query Table +579311000000104,Malignant neoplasm of orbit NOS (disorder),n,via Query Table +189631001,[M]Oxyphilic adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +832521000000108,Acute monoblastic leukaemia,n,via Query Table +546351000000108,Chronic myeloid leukemia NOS (disorder),n,via Query Table +1884006,Molar pregnancy with choriocarcinoma (disorder),n,via Query Table +397631000000103,[X]Malignant neoplasm of ill-defined sites within the digestive system (disorder),n,via Query Table +189555001,[M]Small cell carcinoma NOS (morphologic abnormality),n,via Query Table +662431000000108,Chronic leukemia NOS (disorder),n,via Query Table +190102007,"[X]Malignant neoplasm of bone and articular cartilage, unspecified (disorder)",n,via Query Table +190107001,"[X]Malignant neoplasm of skin, unspecified (disorder)",n,via Query Table +463341000000103,[M]Basophilic leukaemia NOS (morphologic abnormality),n,via Query Table +390651000000106,[X]Neoplasm of uncertain and unknown behaviour of other myelodysplastic syndromes (disorder),n,via Query Table +189916007,[M]Spongioblastoma NOS (morphologic abnormality),n,via Query Table +254630009,Clear cell carcinoma of lung (disorder),n,via Query Table +478201000000109,[M]Seminoma NOS (morphologic abnormality),n,via Query Table +477851000000107,[M]Lymphoid leukaemias (morphologic abnormality),n,via Query Table +186722007,HIV disease resulting in Kaposi's sarcoma (disorder),n,via Query Table +832621000000109,"Hodgkin's disease, lymphocytic depletion",n,via Query Table +821881000000100,Benign fibroma of prostate (disorder),n,via Query Table +634621000000108,Other monocytic leukemia (disorder),n,via Query Table +547121000000104,Secondary and unspecified malignant neoplasm of popliteal lymph nodes (disorder),n,via Query Table +401221000000100,[M]Malignant histiocytosis (morphologic abnormality),n,via Query Table +663651000000108,Malignant neoplasm of anus unspecified (disorder),n,via Query Table +557091000000102,"Malignant neoplasm of middle lobe, bronchus or lung NOS (disorder)",n,via Query Table +402535002,Basal cell carcinoma with sweat gland differentiation (disorder),n,via Query Table +255070009,"Malignant tumor of oral cavity, lips, salivary glands (disorder)",n,via Query Table +635011000000105,Malignant neoplasm of connective and soft tissue of pelvis NOS (disorder),n,via Query Table +190052000,[M]Basophilic leukemias (morphologic abnormality),n,via Query Table +536091000000103,Secondary and unspecified malignant neoplasm of intrathoracic lymph nodes NOS (disorder),n,via Query Table +431561000000103,(Mesothelioma of lung) or ([X]mesothelioma of other sites),n,via Query Table +833141000000104,Enteropathy-associated T-cell lymphoma,n,via Query Table +814981000000100,"Anaplastic large cell lymphoma, ALK-negative (disorder)",n,via Query Table +450861000000108,[M]Mesenchymal nephroblastoma (morphologic abnormality),n,via Query Table +578281000000109,Malignant lymphoma NOS of intrathoracic lymph nodes (disorder),n,via Query Table +698151000000107,Ca colon NOS (disorder),n,via Query Table +578441000000102,Hodgkin's paragranuloma NOS (disorder),n,via Query Table +569311000000107,Secondary and unspecified malignant neoplasm of facial lymph nodes (disorder),n,via Query Table +537991000000100,Malignant neoplasm of palate unspecified (disorder),n,via Query Table +401121000000109,[X]Unspecified B-cell non-Hodgkin's lymphoma,n,via Query Table +833091000000105,[M] Refractory anaemia with sideroblasts,n,via Query Table +189640002,[M]Mixed cell adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +23746000,Intracystic carcinoma (morphologic abnormality),n,via Query Table +539711000000102,Nodular lymphoma NOS (disorder),n,via Query Table +570611000000103,Malignant neoplasm of vagina NOS (disorder),n,via Query Table +833431000000104,[M]Erythroleukaemia,n,via Query Table +538011000000106,Secondary and unspecified malignant neoplasm of external iliac lymph nodes (disorder),n,via Query Table +534631000000101,"Malignant neoplasm of lip, inner aspect NOS (disorder)",n,via Query Table +269543002,Ca rectum with Ca anus (disorder),n,via Query Table +424721000000102,[M]Renal adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +306870009,Ca rectum + Ca anus NOS (disorder),n,via Query Table +189700001,[M]Mucinous adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +397346005,Acute bilineal leukemia (morphologic abnormality),n,via Query Table +533471000000103,Secondary malignant neoplasm of other respiratory organs (disorder),n,via Query Table +688151000000106,Secondary malignant neoplasm of other specified sites (disorder),n,via Query Table +437781000000108,[M]Pituitary adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +454781000000102,[M] Immunoproliferative small intestinal disease (morphologic abnormality),n,via Query Table +408621000000109,[M]Villous adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +188251003,Hypernephroma (disorder),n,via Query Table +412771000000104,"[X]Malignant neoplasm of peripheral nerves of trunk, unspecified (disorder)",n,via Query Table +189808004,[M]Carcinosarcoma NOS (morphologic abnormality),n,via Query Table +190032001,[M]Compound leukemia NOS (morphologic abnormality),n,via Query Table +956541000000108,Malignant Melanoma Stage IV M1b ,n,via Query Table +437871000000101,[M]Papillary carcinoma NOS (morphologic abnormality),n,via Query Table +95262001,Sézary's disease of lymph nodes of multiple sites (disorder),n,via Query Table +189623006,[M]Papillary adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +569351000000106,"Secondary and unspecified malignant neoplasm of lymph nodes of head, face and neck NOS (disorder)",n,via Query Table +190133009,"[X]Malignant neoplasm of eye, brain and other parts of central nervous system (disorder)",n,via Query Table +190105009,"[X]Malignant melanoma of skin, unspecified (disorder)",n,via Query Table +190098004,[X]Malignant neoplasm of bone and articular cartilage (disorder),n,via Query Table +450191000000106,[M]Sarcomatosis NOS (morphologic abnormality),n,via Query Table +74153005,Molar pregnancy with invasive hydatidiform mole (disorder),n,via Query Table +832591000000106,"Hodgkin's disease, lymphocytic predominance - nodular",n,via Query Table +432271000000102,"[X]Malignant neoplasm of meninges, unspecified",n,via Query Table +253076000,Melanotic neuroectodermal tumor of infancy (morphologic abnormality),n,via Query Table +546861000000101,Malignant melanoma of lower limb or hip NOS (disorder),n,via Query Table +815311000000105,Acute myeloid leukemia with myelodysplasia-related changes (disorder),n,via Query Table +426751000000103,[M]Epithelial nephroblastoma (morphologic abnormality),n,via Query Table +277608004,"Hodgkin's disease, lymphocytic predominance - nodular (disorder)",n,via Query Table +443621000000109,"[X]Malignant neoplasm of central nervous system, unspecified (disorder)",n,via Query Table +85530002,Heterophilic leukemia (morphologic abnormality),n,via Query Table +863771000000102,Clinical stage B chronic lymphocytic leukaemia ,n,via Query Table +450041000000102,[X]Other Hodgkin's disease (disorder),n,via Query Table +833381000000105,Follicular lymphoma grade 3b,n,via Query Table +573481000000104,Malignant neoplasm of colon NOS (disorder),n,via Query Table +657371000000107,Malignant neoplasm of epiglottis NOS (disorder),n,via Query Table +408351000000109,[M]Oxyphilic adenomas and adenocarcinomas (morphologic abnormality),n,via Query Table +190006007,[M]Microglioma (morphologic abnormality),n,via Query Table +578451000000104,Hodgkin's granuloma of unspecified site (disorder),n,via Query Table +760981000000108,"Basal cell carcinoma, micronodular (morphologic abnormality)",n,via Query Table +863141000000107,Non-small cell carcinoma (morphologic abnormality),n,via Query Table +397811000000105,[M]Spindle cell melanoma NOS (morphologic abnormality),n,via Query Table +189934006,[M]Retinoblastomas (morphologic abnormality),n,via Query Table +543421000000101,"Malignant neoplasm of head, neck and face NOS (disorder)",n,via Query Table +368671000000103,Siewert type I adenocarcinoma ,n,via Query Table +337671000000108,Clark melanoma level 2,n,via Query Table +557081000000104,"Malignant neoplasm of upper lobe, bronchus or lung NOS (disorder)",n,via Query Table +189835008,[M]Adenomatoid tumor NOS (morphologic abnormality),n,via Query Table +814851000000101,Diffuse follicle centre lymphoma (disorder),n,via Query Table +203436008,Osteoporosis in multiple myelomatosis (disorder),n,via Query Table +408321000000104,[M]Myoma and myosarcoma (morphologic abnormality),n,via Query Table +190029004,"[M]leukemia unspecified, NOS (morphologic abnormality)",n,via Query Table +189939001,[M]Neuroepitheliomatous neoplasm NOS (morphologic abnormality),n,via Query Table +833061000000104,Anaplastic lymphoma kinase negative anaplastic large cell lymphoma,n,via Query Table +832581000000109,Secondary malignant neoplasm of liver and intrahepatic bile duct,n,via Query Table +534801000000106,Malignant neoplasm of other specified part of esophagus (disorder),n,via Query Table +834551000000108,Adenoma - prostate,n,via Query Table +189552003,"[M]Carcinoma, undifferentiated type, NOS (morphologic abnormality)",n,via Query Table +425161000000108,[M]Sebaceous adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +189629005,[M]Pituitary adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +620441000000107,Malignant neoplasm of liver and intrahepatic bile ducts NOS (disorder),n,via Query Table +189805001,[M]Epithelial nephroblastoma (morphologic abnormality),n,via Query Table +424671000000107,[M]Endometrioid adenomas and carcinomas (morphologic abnormality),n,via Query Table +189661009,[M]Skin appendage carcinoma (morphologic abnormality),n,via Query Table +534681000000102,Malignant neoplasm of dorsum of tongue NOS (disorder),n,via Query Table +190091005,[X]Malignant neoplasm of respiratory and intrathoracic organs (disorder),n,via Query Table +390281000000103,[X]Kaposi's sarcoma of other sites (disorder),n,via Query Table +557501000000103,Mast cell malignancy of unspecified site (disorder),n,via Query Table +188678009,Diffuse non-Hodgkin's lymphoblastic (diffuse) lymphoma (disorder),n,via Query Table +462491000000106,[M]Oligodendroglioma NOS (morphologic abnormality),n,via Query Table +778091000000101,"Basal cell carcinoma, infiltrative",n,via Query Table +832601000000100,"Hodgkin's disease, nodular sclerosis",n,via Query Table +833501000000109,Primary cutaneous CD30 antigen positive large T-cell lymphoma,n,via Query Table +189636006,[M]Renal adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +190164006,"[X]Malignant neoplasm of lymphoid, hematopoietic and related tissue, unspecified (disorder)",n,via Query Table +269507008,[M]Neuroblastoma NOS (morphologic abnormality),n,via Query Table +269501009,[M]Adenomatous and adenocarcinomatous polyps of colon (morphologic abnormality),n,via Query Table +189609009,"[M]Carcinoid tumor, malignant (morphologic abnormality)",n,via Query Table +579291000000100,Malignant neoplasm of eyeball NOS (disorder),n,via Query Table +833641000000106,[M]Plasmacytoma NOS,n,via Query Table +463221000000103,[M]Retinoblastoma NOS (morphologic abnormality),n,via Query Table +558021000000101,Secondary and unspecified malignant neoplasm of internal mammary lymph nodes (disorder),n,via Query Table +666491000000108,Malignant neoplasm of other sites of tongue (disorder),n,via Query Table +189692006,[M]Mucinous cystadenocarcinoma NOS (morphologic abnormality),n,via Query Table +477491000000102,[M]Tubular adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +549611000000107,Malignant neoplasm of other site of cervix (disorder),n,via Query Table +778081000000103,"Basal cell carcinoma, micronodular",n,via Query Table +541021000000108,"Hodgkin's disease, mixed cellularity NOS (disorder)",n,via Query Table +687921000000103,Disseminated malignancy NOS (disorder),n,via Query Table +565581000000109,Secondary and unspecified malignant neoplasm of anterior mediastinal lymph nodes (disorder),n,via Query Table +537941000000105,Malignant neoplasm of gum NOS (disorder),n,via Query Table +548991000000100,Malignant neoplasm of cerebral meninges NOS (disorder),n,via Query Table +778041000000106,"[M]Malignant lymphoma, large cell, diffuse NOS",n,via Query Table +579241000000105,Malignant neoplasm of other site of urinary bladder (disorder),n,via Query Table +875391000000109,Non-small cell carcinoma,n,via Query Table +189927009,[M]Neuroepitheliomatous neoplasms (morphologic abnormality),n,via Query Table +417681000000107,"[X]Non-Hodgkin's lymphoma, unspecified type",n,via Query Table +634561000000104,"Malignant neoplasm of auditory tube, middle ear and mastoid air cells NOS (disorder)",n,via Query Table +189764008,[M]Sarcoma NOS (morphologic abnormality),n,via Query Table +188657006,Letterer-Siwe disease of lymph nodes of axilla and upper limb (disorder),n,via Query Table +84350008,AIDS with immunoblastic sarcoma (disorder),n,via Query Table +189628002,[M]Pituitary adenomas and carcinomas (morphologic abnormality),n,via Query Table +408911000000106,[X]Malignant neoplasm of thyroid and other endocrine glands (disorder),n,via Query Table +579301000000101,Secondary and unspecified malignant neoplasm of submental lymph nodes (disorder),n,via Query Table +190086009,[X]Malignant neoplasm of digestive organs (disorder),n,via Query Table +187737000,Malignant neoplasm of prepylorus of stomach (disorder),n,via Query Table +549521000000102,Malignant neoplasm of female breast NOS (disorder),n,via Query Table +557491000000109,Letterer-Siwe disease NOS (disorder),n,via Query Table +569291000000106,Secondary and unspecified malignant neoplasm of deep parotid lymph nodes (disorder),n,via Query Table +833331000000106,Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue,n,via Query Table +815191000000104,"Atypical chronic myeloid leukaemia, BCR/ABL-negative (morphologic abnormality)",n,via Query Table +546881000000105,Malignant melanoma of skin NOS (disorder),n,via Query Table +578251000000103,Malignant mast cell tumor NOS (disorder),n,via Query Table +418829009,Primary malignant neoplasm of lacrimal drainage structure (disorder),n,via Query Table +557121000000101,Malignant neoplasm of other specified pleura (disorder),n,via Query Table +189632008,[M]Clear cell adenomas and adenocarcinomas (morphologic abnormality),n,via Query Table +439151000000109,[X]Secondary and unspecified malignant neoplasm lymph nodes of multiple regions (disorder),n,via Query Table +190051007,[M]Other myeloid leukemia NOS (morphologic abnormality),n,via Query Table +539701000000104,Nodular lymphoma of unspecified site (disorder),n,via Query Table +564921000000101,Malignant neoplasm of upper limb NOS (disorder),n,via Query Table +192581000000107,Malignant sacral teratoma,n,via Query Table +189642005,[M]Follicular adenocarcinoma NOS (morphologic abnormality),n,via Query Table +189573003,[M]Basal cell carcinoma NOS (morphologic abnormality),n,via Query Table +956361000000102,Malignant Melanoma Stage IB ,n,via Query Table +389851000000102,[M]Strumal neoplasms (morphologic abnormality),n,via Query Table +186725009,Human immunodeficiency virus disease resulting in multiple malignant neoplasms (disorder),n,via Query Table +188085009,Malignant neoplasm of eyelid including canthus (disorder),n,via Query Table +426711000000102,[M]Pancreatic adenomas and carcinomas (morphologic abnormality),n,via Query Table +472961000000101,[M]Aleukaemic lymphoid leukaemia (morphologic abnormality),n,via Query Table +546691000000106,Secondary malignant neoplasm of retroperitoneum or peritoneum NOS (disorder),n,via Query Table +450141000000101,[X]Malignant neoplasm of bone and articular cartilage (disorder),n,via Query Table +689131000000106,Bladder papilloma NOS (disorder),n,via Query Table +428971000000106,"[M]Lymphogranuloma, malignant (morphologic abnormality)",n,via Query Table +56346006,Lucke frog kidney carcinoma (disorder),n,via Query Table +561581000000107,Malignant neoplasm of other specified site of eye (disorder),n,via Query Table +188636003,Sezary's disease of spleen (disorder),n,via Query Table +439171000000100,"[X]Malignant neoplasm of peripheral nerves and autonomic nervous system, unspecified (disorder)",n,via Query Table +833361000000101,Follicular lymphoma grade 3,n,via Query Table +401561000000106,[M]Monocytoid B-cell lymphoma,n,via Query Table +566521000000100,Malignant neoplasm of anterior epiglottis NOS (disorder),n,via Query Table +635001000000108,"Malignant neoplasm of rectum, rectosigmoid junction and anus NOS (disorder)",n,via Query Table +254523008,Malignant tumor of arytenoid (disorder),n,via Query Table +134179007,[M]Malignant histiocytosis (morphologic abnormality),n,via Query Table +557651000000103,Reticulosarcoma NOS (disorder),n,via Query Table +94149003,"Acute megakaryoblastic leukemia, FAB M7 (disorder)",n,via Query Table +174581000000106,Cancer hospital treatment completed,n,via Query Table +540291000000105,Malignant neoplasm of skin of lower limb or hip NOS (disorder),n,via Query Table +189671006,[M]Sebaceous adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +540281000000108,Malignant neoplasm of skin of upper limb or shoulder NOS (disorder),n,via Query Table +93852003,Primary malignant neoplasm of lacrimal duct (disorder),n,via Query Table +832631000000106,Lymphocyte-rich classical Hodgkin lymphoma,n,via Query Table +833021000000107,Other types of follicular non-Hodgkin's lymphoma,n,via Query Table +189819001,[M]Brenner tumor NOS (morphologic abnormality),n,via Query Table +815451000000102,Primary cutaneous CD30 antigen positive large T-cell lymphoma (disorder),n,via Query Table +396731000000106,[M]Lobular carcinoma NOS (morphologic abnormality),n,via Query Table +253063006,Fibrous astrocytoma (morphologic abnormality),n,via Query Table +438251000000108,"[M]leukemia unspecified, NOS (morphologic abnormality)",n,via Query Table +546831000000106,Malignant neoplasm of other specified sites of pancreas (disorder),n,via Query Table +424631000000105,[M]Adenomatous or adenocarcinomatous polyps of the colon NOS (morphologic abnormality),n,via Query Table +573431000000103,Reticulosarcoma or lymphosarcoma NOS (disorder),n,via Query Table +760641000000105,"Basal cell carcinoma, nodular (morphologic abnormality)",n,via Query Table +534851000000107,Malignant neoplasm of greater curve of stomach unspecified (disorder),n,via Query Table +189830003,[M]Clear cell sarcoma of tendons and aponeuroses (morphologic abnormality),n,via Query Table +396791000000107,"[M]Papillary cystadenocarcinoma, NOS (morphologic abnormality)",n,via Query Table +438291000000100,[M]Sebaceous adenoma and adenocarcinoma (morphologic abnormality),n,via Query Table +170961000000104,Cancer pain and symptom management,n,via Query Table +757841000000103,Grade 3 (Stage pTa) papillary urothelial/transitional cell carcinoma,n,via Query Table +437201000000108,[M]Tibial adamantinoma (morphologic abnormality),n,via Query Table +373627005,Bronchioloalveolar carcinoma (disorder),n,via Query Table +190011009,[M] Gamma heavy chain disease (morphologic abnormality),n,via Query Table +189600008,[M]Adenomatous or adenocarcinomatous polyp NOS (morphologic abnormality),n,via Query Table +189601007,[M]Tubular adenomas and adenocarcinomas (morphologic abnormality),n,via Query Table +778071000000100,"Basal cell carcinoma, nodular",n,via Query Table +190112000,"[X]Kaposi's sarcoma, unspecified (disorder)",n,via Query Table +561431000000107,Malignant neoplasm of palate NOS (disorder),n,via Query Table +832611000000103,"Hodgkin's disease, mixed cellularity",n,via Query Table +89706008,AIDS with Burkitt's tumor (disorder),n,via Query Table +863131000000103,Peripheral neuroectodermal tumour (morphologic abnormality),n,via Query Table +449421003,Malignant neoplasm of placenta (disorder),n,via Query Table +472951000000104,[M]Subacute lymphoid leukaemia (morphologic abnormality),n,via Query Table +399491000000106,[M] Myxoid chondrosarcoma (morphologic abnormality),n,via Query Table +833491000000103,Malignant lymphoma - lymphoblastic,n,via Query Table +93450001,Erythroleukemia in remission (disorder),n,via Query Table +189681005,[M]Cystadenocarcinoma NOS (morphologic abnormality),n,via Query Table +337261000000103,Clark melanoma level 5,n,via Query Table +213981000000105,High grade prostatic intraepithelial neoplasia,n,via Query Table +457571000000102,[M]Subacute myeloid leukaemia (morphologic abnormality),n,via Query Table +833521000000100,Cutaneous lymphoma,n,via Query Table +189935007,[M]Retinoblastoma NOS (morphologic abnormality),n,via Query Table +190057006,[M]Monocytic leukemias (morphologic abnormality),n,via Query Table +188756007,Acute panmyelosis (disorder),n,via Query Table +541891000000101,Lymphosarcoma of unspecified site (disorder),n,via Query Table +189553008,"[M]Carcinoma, anaplastic type, NOS (morphologic abnormality)",n,via Query Table +956341000000103,Malignant Melanoma Stage IA ,n,via Query Table +579231000000101,Secondary and unspecified malignant neoplasm of mastoid lymph nodes (disorder),n,via Query Table +189630000,[M]Oxyphilic adenomas and adenocarcinomas (morphologic abnormality),n,via Query Table +539541000000105,Secondary and unspecified malignant neoplasm of inferior tracheobronchial lymph nodes (disorder),n,via Query Table +190139008,"[X]Malignant neoplasm - pluriglandular involvement, unspecified (disorder)",n,via Query Table +427051000000102,[X]Malignant neoplasm of overlapping lesion of male genital organs (disorder),n,via Query Table +408661000000101,[X]Other specified types of non-Hodgkin's lymphoma (disorder),n,via Query Table +190035004,[M]Subacute lymphoid leukemia (morphologic abnormality),n,via Query Table +966311000000107,Active surveillance of prostate cancer (regime/therapy),n,via Query Table +269478004,Chronic erythremia (disorder),n,via Query Table +546841000000102,Malignant melanoma of face NOS (disorder),n,via Query Table +533411000000108,Malignant neoplasm of ovary and other uterine adnexa (disorder),n,via Query Table +545241000000108,Secondary and unspecified malignant neoplasm of superficial cervical lymph nodes (disorder),n,via Query Table +189921005,[M]Medulloblastoma NOS (morphologic abnormality),n,via Query Table +916281000000108,Malignant melanoma of eye,n,via Query Table +540301000000109,Malignant neoplasm of other specified skin sites (disorder),n,via Query Table +541001000000104,Secondary and unspecified malignant neoplasm of intra-abdominal lymph nodes (disorder),n,via Query Table +867931000000106,[M]Juvenile myelomonocytic leukaemia (morphologic abnormality),n,via Query Table +471861000000102,"[X]Malignant neoplasm of bones and articular cartilage of limb, unspecified",n,via Query Table +425941000000105,"[X]Malignant neoplasm of intestinal tract, part unspecified (disorder)",n,via Query Table +561461000000102,Malignant neoplasm of mouth NOS (disorder),n,via Query Table +414141000000102,[M]Glioblastoma multiforme (& NOS),n,via Query Table +411551000000106,[X]Kaposi's sarcoma of multiple organs (disorder),n,via Query Table +276611000000108,Malignant neoplasm of descended testis NOS (disorder),n,via Query Table +833371000000108,Follicular lymphoma grade 3a,n,via Query Table +645061000000108,"Malignant neoplasm of lip unspecified, mucosa (disorder)",n,via Query Table +832911000000106,Acute myeloblastic leukaemia,n,via Query Table +426741000000101,[M]Skin appendage adenoma and carcinoma (morphologic abnormality),n,via Query Table +189715000,[M] Intracystic carcinoma NOS (morphologic abnormality),n,via Query Table +189832006,[M]Mesothelial neoplasms (morphologic abnormality),n,via Query Table +855201000000106,Prostatic intraepithelial neoplasia,n,via Query Table +408771000000104,[M]Compound leukaemia (morphologic abnormality),n,via Query Table +757251000000101,Diffuse malignant lymphoma - large cell,n,via Query Table +478611000000108,"[X]Malignant neoplasm of skin, unspecified (disorder)",n,via Query Table +396121000000105,[M]Adenomatoid tumour NOS (morphologic abnormality),n,via Query Table +565961000000108,Malignant lymphoma NOS of intrapelvic lymph nodes (disorder),n,via Query Table +566041000000100,Malignant neoplasm of pituitary gland or craniopharyngeal duct NOS (disorder),n,via Query Table +804391000000100,Enchondroma (morphologic abnormality),n,via Query Table +188759000,Lymphosarcoma cell leukemia (disorder),n,via Query Table +189652009,[M]Endometrioid adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +175601000000101,Date cancer diagnosis received in primary care,n,via Query Table +429391000000101,"[X]Malignant neoplasm of peripheral nerves of trunk, unspecified (disorder)",n,via Query Table +397641000000107,[X]Malignant neoplasm of respiratory and intrathoracic organs (disorder),n,via Query Table +413526008,"Anaplastic large cell lymphoma, T/Null cell, primary cutaneous type (morphologic abnormality)",n,via Query Table +573341000000101,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of unspecified site (disorder),n,via Query Table +396241000000108,[M]Pituitary adenomas and carcinomas (morphologic abnormality),n,via Query Table +190132004,"[X]Malignant neoplasm of urinary organ, unspecified (disorder)",n,via Query Table +832661000000101,B-cell chronic lymphocytic leukaemia,n,via Query Table +462461000000100,[X]Malignant neoplasm of female genital organs (disorder),n,via Query Table +556151000000108,Malignant lymphoma NOS of unspecified site (disorder),n,via Query Table +189593006,[M]Hepatobiliary adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +420631000000103,[M]Acute lymphoid leukaemia (morphologic abnormality),n,via Query Table +561451000000100,Malignant neoplasm of other specified mouth parts (disorder),n,via Query Table +550111000000106,Malignant neoplasm of main bronchus NOS (disorder),n,via Query Table +269503007,[M]Malignant melanoma NOS (morphologic abnormality),n,via Query Table +389781000000104,[X]Malignant neoplasm without specification of site (disorder),n,via Query Table +187959005,Malignant neoplasm of long bones of leg (disorder),n,via Query Table +188624009,Mycosis fungoides of lymph nodes of inguinal region and lower limb (disorder),n,via Query Table +188526000,Hodgkin's paragranuloma of intra-abdominal lymph nodes (disorder),n,via Query Table +359626007,"Acute myelogenous leukemia without differentiation, FAB M0 (disorder)",n,via Query Table +704561000000101,Carcinoma of ovary and other uterine adnexa (disorder),n,via Query Table +539731000000105,Mycosis fungoides of unspecified site (disorder),n,via Query Table +389861000000104,[M]Medulloblastoma NOS (morphologic abnormality),n,via Query Table +189818009,[M]Brenner tumors (morphologic abnormality),n,via Query Table +461881000000104,[M]Plasma cell leukaemias (morphologic abnormality),n,via Query Table +570661000000101,Malignant neoplasm of undescended testis NOS (disorder),n,via Query Table +539521000000103,Malignant neoplasm of cerebral ventricle NOS (disorder),n,via Query Table +396811000000108,[M]Seminomas (morphologic abnormality),n,via Query Table +409691000000100,[M]Aleukaemic leukaemia NOS (morphologic abnormality),n,via Query Table +437231000000102,[M]Adenomatous and adenocarcinomatous polyps (morphologic abnormality),n,via Query Table +573631000000101,"Malignant neoplasm of upper respiratory tract, part unspecified (disorder)",n,via Query Table +313430005,Teratoma of descended testis (disorder),n,via Query Table +190024009,[M]leukemias unspecified (morphologic abnormality),n,via Query Table +573521000000104,Malignant neoplasm of vulva unspecified (disorder),n,via Query Table +190007003,[M]Histiocytic medullary reticulosis (morphologic abnormality),n,via Query Table +190063002,[M]Miscellaneous leukemias (morphologic abnormality),n,via Query Table +36449005,Acute erythremia (morphologic abnormality),n,via Query Table +409151000000100,[M]Carcinosarcoma NOS (morphologic abnormality),n,via Query Table +186709004,Human immunodeficiency virus with secondary cancers (disorder),n,via Query Table +187979002,Malignant neoplasm of short bones of leg NOS (disorder),n,via Query Table +189584005,"[M]Adenocarcinoma, metastatic, NOS (morphologic abnormality)",n,via Query Table +134166003,[M]Rhabdomyosarcoma NOS (morphologic abnormality),n,via Query Table +189837000,"[M]Mesothelioma, unspecified (morphologic abnormality)",n,via Query Table +408591000000106,[X]Polyneuropathy in neoplastic disease classified elsewhere (disorder),n,via Query Table +189585006,[M]Pancreatic adenomas and carcinomas (morphologic abnormality),n,via Query Table +313431009,Teratoma of undescended testis (disorder),n,via Query Table +189930002,[M]Ganglioneuromatous neoplasm NOS (morphologic abnormality),n,via Query Table +534641000000105,Malignant neoplasm of other sites of lip (disorder),n,via Query Table +389831000000109,[X]Malignant neoplasm of other specified female genital organs (disorder),n,via Query Table +190070002,[M]Miscellaneous leukemia NOS (morphologic abnormality),n,via Query Table +127216000,Angioimmunoblastic lymphadenopathy with dysproteinemia (disorder),n,via Query Table +425131000000103,[M]Acute megakaryoblastic leukaemia (morphologic abnormality),n,via Query Table +190147008,[X]Secondary malignant neoplasm of bladder and other and unspecified urinary organs (disorder),n,via Query Table +189619003,[M]Papillary adenomas and adenocarcinomas (morphologic abnormality),n,via Query Table +539511000000109,Malignant neoplasm of temporal lobe NOS (disorder),n,via Query Table +188619006,"Mycosis fungoides of the lymph nodes of head, face and neck (disorder)",n,via Query Table +691161000000101,Ca larynx - NOS (disorder),n,via Query Table +415461000000108,[M]Malignant lymphomatous polyposis (morphologic abnormality),n,via Query Table +556031000000100,Malignant neoplasm of specified site of pancreas NOS (disorder),n,via Query Table +552161000000107,Malignant neoplasm of skin of other and unspecified part of face NOS (disorder),n,via Query Table +564901000000105,Malignant neoplasm of thorax NOS (disorder),n,via Query Table +412761000000106,"[X]Malignant neoplasm, overlapping lesion of brain and other part of central nervous system",n,via Query Table +757711000000109,Grade 2 (Stage pTa) papillary urothelial/transitional cell carcinoma,n,via Query Table +438691000000102,[M]Monocytoid B-cell lymphoma (morphologic abnormality),n,via Query Table +534841000000109,Malignant neoplasm of lesser curve of stomach unspecified (disorder),n,via Query Table +455771000000103,[X]Malignant neoplasm of ill-defined sites within the respiratory system (disorder),n,via Query Table +396671000000104,"[X]Malignant neoplasm of endocrine gland, unspecified (disorder)",n,via Query Table +540241000000100,"Malignant neoplasm of intestinal tract, part unspecified (disorder)",n,via Query Table +578481000000105,"Hodgkin's, lymphocytic-histiocytic predominance NOS (disorder)",n,via Query Table +636481000000103,"Malignant neoplasm of lip unspecified, frenulum (disorder)",n,via Query Table +884611000000101,Bowel scope (flexible sigmoidoscopy) screen: cancer detected ,n,via Query Table +437811000000106,[X]other malignant neoplasm of skin of other and unspecified parts of face (disorder),n,via Query Table +538001000000109,Secondary and unspecified malignant neoplasm of common iliac lymph nodes (disorder),n,via Query Table +478151000000104,[M]Embryonal carcinoma NOS (morphologic abnormality),n,via Query Table +636471000000100,"Malignant neoplasm of lip unspecified, inner aspect (disorder)",n,via Query Table +833471000000102,Acute myeloid leukaemia with 11q23 abnormality,n,via Query Table +399501000000100,[X]Other leukaemia of unspecified cell type (disorder),n,via Query Table +539571000000104,Secondary and unspecified malignant neoplasm of paratracheal lymph nodes (disorder),n,via Query Table +479021000000100,[M]Subacute leukaemia NOS (morphologic abnormality),n,via Query Table +574411000000109,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of intrapelvic lymph nodes (disorder),n,via Query Table +566541000000107,Malignant neoplasm of other specified site of oropharynx NOS (disorder),n,via Query Table +255117000,Metastasis to respiratory and intrathoracic organ (disorder),n,via Query Table +188656002,"Letterer-Siwe disease of lymph nodes of head, face and neck (disorder)",n,via Query Table +235965006,Malignant cystic tumor of exocrine pancreas (disorder),n,via Query Table +431831000000105,[M]Acute lymphoid leukaemia,n,via Query Table +707761000000104,Neuroblastoma,n,via Query Table +189813000,[M] Clear cell sarcoma of kidney (morphologic abnormality),n,via Query Table +546851000000104,Malignant melanoma of scalp and neck NOS (disorder),n,via Query Table +573651000000108,"Malignant neoplasm of rib, sternum and clavicle NOS (disorder)",n,via Query Table +438701000000102,"[X]Malignant neoplasm of urinary organ, unspecified (disorder)",n,via Query Table +430991000000109,[M]Rhabdomyosarcoma NOS (morphologic abnormality),n,via Query Table +537951000000108,Malignant neoplasm of other sites of floor of mouth (disorder),n,via Query Table +93866008,Primary malignant neoplasm of leg (disorder),n,via Query Table +255044008,Malignant pinealoma (disorder),n,via Query Table +464261000000109,[M]Mycosis fungoides NOS (morphologic abnormality),n,via Query Table +546701000000106,Secondary malignant neoplasm of other digestive organ (disorder),n,via Query Table +128645007,"Enteroglucagonoma, malignant (morphologic abnormality)",n,via Query Table +815671000000108,"Extranodal NK/T-cell lymphoma, nasal type (disorder)",n,via Query Table +557151000000106,"Malignant neoplasm of other site of heart, thymus and mediastinum (disorder)",n,via Query Table +397431000000100,[M]Neuroepithelioma NOS (morphologic abnormality),n,via Query Table +956421000000102,Malignant Melanoma Stage IIC ,n,via Query Table +391381000000100,[M]Histiocytic medullary reticulosis (morphologic abnormality),n,via Query Table +832921000000100,5Q minus syndrome,n,via Query Table +756621000000106,Epithelioid trophoblastic tumour,n,via Query Table +190022008,[M]Burkitt's tumors (morphologic abnormality),n,via Query Table +190039005,[M]Plasma cell leukemia NOS (morphologic abnormality),n,via Query Table +462251000000102,[X]Malignant neoplasm of overlapping lesion of bone and articular cartilage of limbs (disorder),n,via Query Table +564891000000109,Malignant neoplasm of intrathoracic site NOS (disorder),n,via Query Table +190009000,[M] Alpha heavy chain disease (morphologic abnormality),n,via Query Table +547161000000107,Secondary and unspecified malignant neoplasm of circumflex iliac lymph nodes (disorder),n,via Query Table +278190000,Erythremia (morphologic abnormality),n,via Query Table +477871000000103,[X]Other types of diffuse non-Hodgkin's lymphoma (disorder),n,via Query Table +454411000000101,"[X]Malignant neoplasm of mediastinum, part unspecified",n,via Query Table +579261000000106,Malignant neoplasm of renal pelvis NOS (disorder),n,via Query Table +93840005,Primary malignant neoplasm of intrahepatic bile ducts (disorder),n,via Query Table +190165007,"[X]Diffuse non-Hodgkin's lymphoma, unspecified (disorder)",n,via Query Table +834571000000104,Benign myoma of prostate,n,via Query Table +428301000000104,"[X]Malignant neoplasm of male genital organ, unspecified (disorder)",n,via Query Table +269506004,[M]Glioblastoma NOS (morphologic abnormality),n,via Query Table +437771000000106,[M]Transitional cell carcinoma NOS (morphologic abnormality),n,via Query Table +467881000000109,[X]Malignant neoplasm of overlapping lesion of bone and articular cartilage,n,via Query Table +703541000000100,Secondary carcinoma NOS (disorder),n,via Query Table +462451000000103,[M]Sweat gland adenocarcinoma (morphologic abnormality),n,via Query Table +93639006,Malignant melanoma of skin of leg (disorder),n,via Query Table +541881000000103,Malignant melanoma of upper limb or shoulder NOS (disorder),n,via Query Table +426191000000107,[M]Clear cell sarcoma of tendons and aponeuroses (morphologic abnormality),n,via Query Table +189682003,[M]Cystadenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +956441000000109,Malignant Melanoma Stage IIIA ,n,via Query Table +540251000000102,Malignant neoplasm of spleen NEC (disorder),n,via Query Table +367051000000101,Mantle cell lymphoma (morphologic abnormality),n,via Query Table +547151000000109,Secondary and unspecified malignant neoplasm of internal iliac lymph nodes (disorder),n,via Query Table +634591000000105,Malignant neoplasm of laryngeal cartilage NOS (disorder),n,via Query Table +190053005,[M]Basophilic leukemia NOS (morphologic abnormality),n,via Query Table +533491000000104,"Secondary and unspecified malignant neoplasm of lymph nodes of head, face and neck (disorder)",n,via Query Table +760591000000101,Superficial basal cell carcinoma (disorder),n,via Query Table +550091000000101,Malignant neoplasm of larynx NOS (disorder),n,via Query Table +538041000000107,Secondary and unspecified malignant neoplasm of supratrochlear lymph nodes (disorder),n,via Query Table +187894002,Malignant neoplasm of other and ill-defined sites within the respiratory and intrathoracic organs (disorder),n,via Query Table +540321000000100,Malignant neoplasm of nipple or areola of female breast NOS (disorder),n,via Query Table +189633003,[M]Clear cell adenocarcinoma NOS (morphologic abnormality),n,via Query Table +189649001,[M]Endometrioid adenomas and carcinomas (morphologic abnormality),n,via Query Table +404031000000109,[M]Aleukaemic myeloid leukaemia (morphologic abnormality),n,via Query Table +425211000000103,[M]Neuroepitheliomatous neoplasms (morphologic abnormality),n,via Query Table +549561000000105,"Malignant neoplasm of bone, connective tissue, skin and breast otherwise specified (disorder)",n,via Query Table +541111000000101,Secondary and unspecified malignant neoplasm of celiac lymph nodes (disorder),n,via Query Table +175641000000103,Cancer rehabilitation and readaption,n,via Query Table +462971000000102,[M]Skin appendage adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +189889005,[M]Chondromatous neoplasm NOS (morphologic abnormality),n,via Query Table +833461000000109,Acute myeloid leukaemia with myelodysplasia-related changes,n,via Query Table +419591000000104,"[X]Malignant neoplasm - pluriglandular involvement, unspecified",n,via Query Table +190135002,"[X]Malignant neoplasm of central nervous system, unspecified (disorder)",n,via Query Table +302852008,Plasmacytoma (disorder),n,via Query Table +188651007,Leukemic reticuloendotheliosis of spleen (disorder),n,via Query Table +546821000000109,Malignant neoplasm of gallbladder and extrahepatic bile ducts NOS (disorder),n,via Query Table +534811000000108,Malignant neoplasm of bones of skull and face NOS (disorder),n,via Query Table +539741000000101,Mycosis fungoides NOS (disorder),n,via Query Table +569321000000101,Secondary and unspecified malignant neoplasm of anterior cervical lymph nodes (disorder),n,via Query Table +666511000000100,Malignant neoplasm of spleen NOS (disorder),n,via Query Table +389731000000103,[M]Miscellaneous leukaemias (morphologic abnormality),n,via Query Table +326681000000109,Clark melanoma level 2 (finding),n,via Query Table +389761000000108,"[X]Myelodysplastic syndrome, unspecified (disorder)",n,via Query Table +294311000000101,Bowel cancer detected through national screening programme ,n,via Query Table +253036005,Precancerous melanosis (morphologic abnormality),n,via Query Table +556221000000107,Malignant neoplasms of lymphoid and histiocytic tissue NOS (disorder),n,via Query Table +430841000000108,[M]Angioendotheliomatosis,n,via Query Table +673771000000103,Plasmacytoma NOS (disorder),n,via Query Table +366059005,Letterer-Siwe disease (disorder),n,via Query Table +557131000000104,Malignant neoplasm of pleura NOS (disorder),n,via Query Table +634991000000101,Malignant neoplasm of connective and soft tissue of thorax NOS (disorder),n,via Query Table +956401000000106,Malignant Melanoma Stage IIB ,n,via Query Table +534661000000106,"Malignant neoplasm of lip, vermilion border NOS (disorder)",n,via Query Table +557661000000100,Malignant lymphoma NOS of spleen (disorder),n,via Query Table +269569008,Ca skull/face/jaw bone (disorder),n,via Query Table +615431000000101,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of lymph nodes of axilla and upper limb (disorder),n,via Query Table +189885004,[M]Chondroma NOS (morphologic abnormality),n,via Query Table +537981000000102,Malignant neoplasm of vestibule of mouth NOS (disorder),n,via Query Table +675601000000100,Carcinoma of breast NOS (disorder),n,via Query Table +579321000000105,Malignant neoplasm of lacrimal duct NOS (disorder),n,via Query Table +550081000000103,"Malignant neoplasm of larynx, other specified site (disorder)",n,via Query Table +468681000000109,[M] Small cell osteosarcoma (morphologic abnormality),n,via Query Table +549581000000101,Malignant neoplasm of head NOS (disorder),n,via Query Table +189659000,[M]Skin appendage adenoma and carcinoma (morphologic abnormality),n,via Query Table +463381000000106,[M]Ceruminous adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +410571000000108,[M]Miscellaneous leukaemia NOS (morphologic abnormality),n,via Query Table +255100007,Mycosis fungoides of skin (disorder),n,via Query Table +190034000,[M]Acute lymphoid leukemia (morphologic abnormality),n,via Query Table +190166008,[X]Other and unspecified peripheral and cutaneous T-cell lymphomas (disorder),n,via Query Table +439141000000106,[M]Ganglioneuromatous neoplasms (morphologic abnormality),n,via Query Table +833621000000104,Cutaneous/peripheral T-cell lymphoma,n,via Query Table +337701000000107,Clark melanoma level 5,n,via Query Table +832651000000104,B-cell acute lymphoblastic leukaemia,n,via Query Table +359636004,"Acute myelogenous leukemia without maturation, FAB M1 (disorder)",n,via Query Table +189612007,"[M]Carcinoid tumor, nonargentaffin, malignant (morphologic abnormality)",n,via Query Table +575521000000103,Malignant neoplasm of short bones of leg NOS (disorder),n,via Query Table +94178002,Secondary malignant neoplasm of arm (disorder),n,via Query Table +451111000000105,"[M]Carcinoma, undifferentiated type, NOS (morphologic abnormality)",n,via Query Table +556061000000105,Burkitt's lymphoma NOS (disorder),n,via Query Table +294321000000107,Bowel cancer detected through national screening programme ,n,via Query Table +569281000000109,Secondary malignant neoplasm of other urinary organ NOS (disorder),n,via Query Table +700064004,Familial nonpolyposis colorectal cancer (disorder),n,via Query Table +190151005,"[X]Malignant neoplasms of lymphoid, hematopoietic and related tissue (disorder)",n,via Query Table +833171000000105,Mantle cell lymphoma,n,via Query Table +815091000000103,Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue [MALT-lymphoma] (disorder),n,via Query Table +255014005,Medulloepithelioma of ciliary body (disorder),n,via Query Table +390781000000108,[M]Oxyphilic adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +36425007,Comedocarcinoma (morphologic abnormality),n,via Query Table +307652003,Idiopathic thrombocythemia (disorder),n,via Query Table +918261000000103,Lymphangiosarcoma of skin,n,via Query Table +169931000000107,Cancer hospital treatment completed,n,via Query Table +78010001,"Malignant lymphoma, large B-cell, diffuse, immunoblastic (morphologic abnormality)",n,via Query Table +190036003,[M]Aleukemic lymphoid leukemia (morphologic abnormality),n,via Query Table +337251000000101,Clark melanoma level 4,n,via Query Table +572601000000104,Malignant neoplasm of other site of female breast NOS (disorder),n,via Query Table +399211000000101,"[X]Non-Hodgkin's lymphoma, unspecified type (disorder)",n,via Query Table +578501000000101,"Hodgkin's disease, nodular sclerosis NOS (disorder)",n,via Query Table +478171000000108,[M]Papillary adenomas and adenocarcinomas (morphologic abnormality),n,via Query Table +477841000000109,[M]Compound leukaemia NOS (morphologic abnormality),n,via Query Table +704551000000104,Primary malignant neoplasm of ovary and other uterine adnexa (disorder),n,via Query Table +555731000000108,Secondary and unspecified malignant neoplasm of sacral lymph nodes (disorder),n,via Query Table +198651000000100,High grade prostatic intraepithelial neoplasia (disorder),n,via Query Table +189881008,[M] Myxoid chondrosarcoma (morphologic abnormality),n,via Query Table +541731000000108,Secondary malignant neoplasm of respiratory or digestive system NOS (disorder),n,via Query Table +569271000000107,Secondary and unspecified malignant neoplasm of occipital lymph nodes (disorder),n,via Query Table +812871000000103,Juvenile myelomonocytic leukaemia (disorder),n,via Query Table +189673009,[M]Ceruminous adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +392061000000102,[M] Clear cell sarcoma of kidney (morphologic abnormality),n,via Query Table +190054004,[M]Eosinophilic leukemias (morphologic abnormality),n,via Query Table +532061000000105,"Malignant neoplasm of skin of chest, excluding breast (disorder)",n,via Query Table +190148003,[X]Secondary malignant neoplasm of other and unspecified parts of nervous system (disorder),n,via Query Table +556161000000106,Secondary malignant neoplasm of brain or spinal cord NOS (disorder),n,via Query Table +269509006,"[M]Lymphogranuloma, malignant (morphologic abnormality)",n,via Query Table +557641000000101,Reticulosarcoma of unspecified site (disorder),n,via Query Table +541011000000102,Hodgkin's sarcoma NOS (disorder),n,via Query Table +832641000000102,Hodgkin's disease,n,via Query Table +575501000000107,"Malignant neoplasm of pelvis, sacrum or coccyx NOS (disorder)",n,via Query Table +337231000000108,Clark melanoma level 2,n,via Query Table +190031008,[M]Compound leukemia (morphologic abnormality),n,via Query Table +190047005,[M]Myeloid leukemias (morphologic abnormality),n,via Query Table +815681000000105,Subcutaneous panniculitic T-cell lymphoma (disorder),n,via Query Table +170981000000108,Cancer rehabilitation and readaption,n,via Query Table +189920006,[M]Oligodendroglioma NOS (morphologic abnormality),n,via Query Table +80440003,AIDS with malignant neoplasm (disorder),n,via Query Table +189841001,[M]Seminoma NOS (morphologic abnormality),n,via Query Table +189662002,[M]Skin appendage adenoma or carcinoma NOS (morphologic abnormality),n,via Query Table +190090006,[X]Malignant neoplasm of ill-defined sites within the digestive system (disorder),n,via Query Table +760951000000102,"Basal cell carcinoma, infiltrative (disorder)",n,via Query Table +662441000000104,Subacute leukemia NOS (disorder),n,via Query Table +833541000000107,Subcutaneous panniculitic T-cell lymphoma,n,via Query Table +190069003,[M]Acute myelofibrosis (morphologic abnormality),n,via Query Table +456171000000109,[X]Malignant neoplasm of overlapping lesion of female genital organs,n,via Query Table +537931000000101,Malignant neoplasm of other sites of gum (disorder),n,via Query Table +549621000000101,Malignant neoplasm of other site of cervix NOS (disorder),n,via Query Table +425511000000100,[M]Chondromatous neoplasm NOS (morphologic abnormality),n,via Query Table +445681000000106,[M]Lymphosarcoma cell leukaemia (morphologic abnormality),n,via Query Table +887531000000102,Cervical smear - high grade dyskaryosis with features of invasive squamous carcinoma ,n,via Query Table +956381000000106,Malignant Melanoma Stage IIA ,n,via Query Table +863751000000106,Clinical stage A chronic lymphocytic leukaemia ,n,via Query Table +389751000000105,[X]Malignant neoplasm of male genital organs (disorder),n,via Query Table +542031000000104,Malignant neoplasm of nasopharynx NOS (disorder),n,via Query Table +541691000000102,Malignant histiocytosis NOS (disorder),n,via Query Table +425121000000100,[X]Malignant neoplasm of digestive organs (disorder),n,via Query Table +408801000000101,[M]Apocrine adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +309431000000107,Squamous cell carcinoma of skin,n,via Query Table +547131000000102,Secondary and unspecified malignant neoplasm of inguinal and lower limb lymph nodes NOS (disorder),n,via Query Table +663661000000106,"Malignant neoplasm of lower lip, inner aspect NOS (disorder)",n,via Query Table +538091000000102,Secondary and unspecified malignant neoplasm of superficial inguinal lymph nodes (disorder),n,via Query Table +578391000000103,Malignant melanoma of ear and external auricular canal NOS (disorder),n,via Query Table +397801000000108,"[M]Carcinoid tumor, nonargentaffin, NOS (morphologic abnormality)",n,via Query Table +966321000000101,Active Surveillance of Prostate Cancer ,n,via Query Table +450171000000107,[M]Sweat gland adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +190067001,[M]Acute megakaryoblastic leukemia (morphologic abnormality),n,via Query Table +94563001,Secondary malignant neoplasm of skin of leg (disorder),n,via Query Table +666471000000109,Malignant neoplasm of ventral tongue surface NOS (disorder),n,via Query Table +687911000000109,Malignant neoplasm of testis NOS (disorder),n,via Query Table +832811000000104,Primary mediastinal (thymic) large B-cell lymphoma,n,via Query Table +275464006,Cerebral tumor - malignant (disorder),n,via Query Table +711701000000107,"Trophoblastic tumour, epithelioid (morphologic abnormality)",n,via Query Table +539531000000101,Malignant neoplasm of brainstem NOS (disorder),n,via Query Table +390261000000107,[M]Eosinophilic leukaemia NOS (morphologic abnormality),n,via Query Table +189761000,[M]Nevi or melanoma NOS (morphologic abnormality),n,via Query Table +579201000000107,Malignant neoplasm of connective and soft tissue of upper limb and shoulder NOS (disorder),n,via Query Table +189679008,[M]Cystadenoma and carcinoma (morphologic abnormality),n,via Query Table +531581000000101,"Malignant neoplasm of skin of trunk, excluding scrotum (disorder)",n,via Query Table +455781000000101,[X]Unspecified B-cell non-Hodgkin's lymphoma (disorder),n,via Query Table +189884000,[M]Chondromatous neoplasms (morphologic abnormality),n,via Query Table +450611000000107,[X]Other monocytic leukaemia (morphologic abnormality),n,via Query Table +541031000000105,Hodgkin's lymphocytic depletion of unspecified site (disorder),n,via Query Table +815101000000106,"Follicular lymphoma, grade 1 (morphologic abnormality)",n,via Query Table +255106001,Teratoma of testis (disorder),n,via Query Table +564931000000104,Malignant neoplasm of lower limb NOS (disorder),n,via Query Table +337681000000105,Clark melanoma level 3,n,via Query Table +190046001,[M]Lymphosarcoma cell leukemia NOS (morphologic abnormality),n,via Query Table +189621008,[M]Papillary adenocarcinoma NOS (morphologic abnormality),n,via Query Table +461931000000107,[M]Myoma or myosarcoma NOS (morphologic abnormality),n,via Query Table +462961000000109,[M]Skin appendage carcinoma (morphologic abnormality),n,via Query Table +449881000000109,[M]Verrucous carcinoma NOS (morphologic abnormality),n,via Query Table +533381000000106,Malignant neoplasm of corpus uteri NOS (disorder),n,via Query Table +757351000000109,Hereditary nonpolyposis colon cancer,n,via Query Table +578161000000107,"Malignant neoplasm of lip, unspecified, external (disorder)",n,via Query Table +573641000000105,Malignant neoplasm of vertebral column NOS (disorder),n,via Query Table +634631000000105,Other monocytic leukemia NOS (disorder),n,via Query Table +690661000000104,Carcinoma of genital organs NOS (disorder),n,via Query Table +573381000000109,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of intra-abdominal lymph nodes (disorder),n,via Query Table +190049008,[M]Aleukemic myeloid leukemia (morphologic abnormality),n,via Query Table +190103002,[X]Melanoma and other malignant neoplasms of skin (disorder),n,via Query Table +409561000000107,[M]Microglioma (morphologic abnormality),n,via Query Table +438321000000105,[M]Papillary adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +389771000000101,"[M]Carcinoid tumor, malignant (morphologic abnormality)",n,via Query Table +437801000000109,[M]Erythroleukemia NOS (morphologic abnormality),n,via Query Table +849141000000100,Adult T-cell leukemia/lymphoma (disorder),n,via Query Table +691151000000104,Ca pancreas NOS (disorder),n,via Query Table +833591000000102,Low grade B-cell lymphoma,n,via Query Table +668601000000102,Malignant neoplasm of pinna NEC (disorder),n,via Query Table +640511000000108,Malignant lymphoma NOS (disorder),n,via Query Table +547141000000106,Secondary and unspecified malignant neoplasm of intrapelvic lymph nodes (disorder),n,via Query Table +190123001,"[X]Malignant neoplasm of uterine adnexa, unspecified (disorder)",n,via Query Table +95256006,Sézary's disease of intra-abdominal lymph nodes (disorder),n,via Query Table +127221002,Hematologic malignancy (disorder),n,via Query Table +398701000000101,[M]Basophilic leukaemias (morphologic abnormality),n,via Query Table +620431000000103,Malignant neoplasm of liver unspecified (disorder),n,via Query Table +556141000000105,Malignant lymphoma otherwise specified (disorder),n,via Query Table +565601000000100,Secondary and unspecified malignant neoplasm of superficial tracheobronchial lymph nodes (disorder),n,via Query Table +439161000000107,[X]Secondary malignant neoplasm of other and unspecified respiratory organs (disorder),n,via Query Table +564881000000107,Malignant neoplasm of chest wall NOS (disorder),n,via Query Table +403961000000102,[M]Neutrophilic leukaemia (morphologic abnormality),n,via Query Table +541131000000109,Secondary and unspecified malignant neoplasm of inferior mesenteric lymph nodes (disorder),n,via Query Table +442921000000108,[M]Adenomatous and adenocarcinomatous polyps of colon (morphologic abnormality),n,via Query Table +425191000000102,[M]Other monocytic leukaemia NOS (morphologic abnormality),n,via Query Table +189685001,"[M]Serous cystadenocarcinoma, NOS (morphologic abnormality)",n,via Query Table +478981000000107,[M]Clear cell adenocarcinoma NOS (morphologic abnormality),n,via Query Table +425221000000109,[M]Burkitt's tumour NOS (morphologic abnormality),n,via Query Table +814201000000103,Primary mediastinal (thymic) large B-cell lymphoma (disorder),n,via Query Table +778061000000107,Superficial basal cell carcinoma,n,via Query Table +634581000000108,Malignant neoplasm of accessory sinus NOS (disorder),n,via Query Table +705141000000109,Sézary's disease of unspecified site (disorder),n,via Query Table +423348002,Secondary malignant neoplasm of lacrimal drainage system (disorder),n,via Query Table +561481000000106,Malignant neoplasm of tonsillar fossa NOS (disorder),n,via Query Table +573441000000107,Hodgkin's paragranuloma of unspecified site (disorder),n,via Query Table +190144001,[X]Secondary and unspecified malignant neoplasm lymph nodes of multiple regions (disorder),n,via Query Table +549531000000100,Malignant neoplasm of nipple or areola of male breast NOS (disorder),n,via Query Table +832821000000105,Follicular non-Hodgkin's lymphoma,n,via Query Table +451141000000106,[X]Secondary malignant neoplasm of other and unspecified digestive organs (disorder),n,via Query Table +541651000000105,Secondary and unspecified malignant neoplasm of inferior epigastric lymph nodes (disorder),n,via Query Table +368691000000104,Siewert type III adenocarcinoma ,n,via Query Table +390901000000101,[X]Malignant neoplasm of overlapping lesion of peripheral nerves and autonomic nervous system (disorder),n,via Query Table +538111000000107,Secondary and unspecified malignant neoplasm of deep inguinal lymph nodes (disorder),n,via Query Table +534651000000108,"Malignant neoplasm of lip, unspecified, lipstick area (disorder)",n,via Query Table +189551005,[M]Large cell carcinoma NOS (morphologic abnormality),n,via Query Table +634931000000102,Malignant neoplasm of posterior wall of stomach NEC (disorder),n,via Query Table +190012002,[M] Large cell lymphoma (morphologic abnormality),n,via Query Table +855061000000104,Local recurrence of malignant tumour of urinary bladder,n,via Query Table +408831000000107,[M]Monocytic leukaemias (morphologic abnormality),n,via Query Table +190140005,"[X]Malignant neoplasm of endocrine gland, unspecified (disorder)",n,via Query Table +533431000000100,Malignant neoplasm of pelvis NOS (disorder),n,via Query Table +438271000000104,[M] Intracystic carcinoma NOS (morphologic abnormality),n,via Query Table +93149008,Leukemic reticuloendotheliosis of lymph nodes of inguinal region AND/OR lower limb (disorder),n,via Query Table +190131006,[X]Malignant neoplasm of urinary tract (disorder),n,via Query Table +93147005,Leukemic reticuloendotheliosis of lymph nodes of axilla AND/OR upper limb (disorder),n,via Query Table +389491000000107,"[M]Adenocarcinoma, metastatic, NOS (morphologic abnormality)",n,via Query Table +189779001,[M]Angiomyoliposarcoma (morphologic abnormality),n,via Query Table +326711000000108,Clark melanoma level 5 (finding),n,via Query Table +189611000,"[M]Carcinoid tumor, nonargentaffin, NOS (morphologic abnormality)",n,via Query Table +188658001,Letterer-Siwe disease of lymph nodes of inguinal region and lower limb (disorder),n,via Query Table +571191000000109,Other myeloid leukemia (disorder),n,via Query Table +569331000000104,Secondary and unspecified malignant neoplasm of deep cervical lymph nodes (disorder),n,via Query Table +74739000,Brenner tumor (morphologic abnormality),n,via Query Table +397121000000107,[M]Eosinophilic leukaemias (morphologic abnormality),n,via Query Table +94541005,Secondary malignant neoplasm of skin of arm (disorder),n,via Query Table +189796000,[M]Myoma and myosarcoma (morphologic abnormality),n,via Query Table +326691000000106,Clark melanoma level 3 (finding),n,via Query Table +833611000000105,[M]AngiocentricT-cell lymphoma,n,via Query Table +389741000000107,[X]Malignant neoplasm of overlapping lesion of female genital organs (disorder),n,via Query Table +187607001,"Malignant neoplasm of upper lip, buccal aspect (disorder)",n,via Query Table +833121000000106,Hepatosplenic T-cell lymphoma,n,via Query Table +648451000000106,"Ca lip, oral, pharynx NOS (disorder)",n,via Query Table +538021000000100,Secondary and unspecified malignant neoplasm of intra-abdominal lymph nodes NOS (disorder),n,via Query Table +695601000000109,Ca stomach NOS (disorder),n,via Query Table +832681000000105,T-cell prolymphocytic leukaemia,n,via Query Table +815031000000104,Hepatosplenic T-cell lymphoma (disorder),n,via Query Table +657401000000109,Ca esophagus NOS (disorder),n,via Query Table +189838005,[M]Mesothelial neoplasm NOS (morphologic abnormality),n,via Query Table +190096000,[X]Malignant neoplasm of ill-defined sites within the respiratory system (disorder),n,via Query Table +187895001,"Malignant neoplasm of upper respiratory tract, part unspecified (disorder)",n,via Query Table +409841000000109,[M]Nevi and melanomas (morphologic abnormality),n,via Query Table +134160009,[M]Dermatofibrosarcoma NOS (morphologic abnormality),n,via Query Table +94363000,Secondary malignant neoplasm of lacrimal duct (disorder),n,via Query Table +539391000000105,Malignant neoplasm of cerebrum NOS (disorder),n,via Query Table +399607007,Chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality),n,via Query Table +390401000000107,[X]Other specified leukaemias (disorder),n,via Query Table +189754004,[M]Precancerous melanosis NOS (morphologic abnormality),n,via Query Table +190079001,"[M]No microscopic confirmation of tumor, clinically malignant (morphologic abnormality)",n,via Query Table +400151006,Congenital melanocytic nevus (morphologic abnormality),n,via Query Table +556051000000107,Malignant neoplasm of retroperitoneum NOS (disorder),n,via Query Table +557161000000109,"Malignant neoplasm of heart, thymus and mediastinum NOS (disorder)",n,via Query Table +573621000000103,Malignant neoplasm of pharynx unspecified (disorder),n,via Query Table +190048000,[M]Subacute myeloid leukemia (morphologic abnormality),n,via Query Table +445691000000108,[M]Myeloid leukaemias (morphologic abnormality),n,via Query Table +821891000000103,Benign myoma of prostate (disorder),n,via Query Table +456651000000108,[M]Leukaemia NOS,n,via Query Table +448922007,Secondary malignant neoplasm of large intestine and rectum (disorder),n,via Query Table +190143007,[X]Malignant neoplasm of overlapping lesion of other and ill-defined sites (disorder),n,via Query Table +440791000000107,[M]Neuroblastoma NOS (morphologic abnormality),n,via Query Table +254853007,Clear cell tumor of ovary (disorder),n,via Query Table +479031000000103,"[X]Malignant neoplasm of bronchus or lung, unspecified (disorder)",n,via Query Table +557671000000107,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of intrathoracic lymph nodes (disorder),n,via Query Table +285768001,Acute myeloblastic leukemia with maturation (disorder),n,via Query Table +189922003,[M]Cerebellar sarcoma NOS (morphologic abnormality),n,via Query Table +189711009,[M]Medullary carcinoma NOS (morphologic abnormality),n,via Query Table +189605003,[M]Adenomatous or adenocarcinomatous polyps of the colon NOS (morphologic abnormality),n,via Query Table +190018003,"Plasma cell tumor, malignant (morphologic abnormality)",n,via Query Table +956521000000101,Malignant Melanoma Stage IV M1a ,n,via Query Table +833351000000104,Follicular lymphoma grade 2,n,via Query Table +286892007,Ca breast - nipple/central (disorder),n,via Query Table +170941000000100,Date cancer diagnosis received in primary care,n,via Query Table +450971000000109,[M]leukemias unspecified (morphologic abnormality),n,via Query Table +697551000000102,Carcinoma liver/biliary system NOS (disorder),n,via Query Table +572191000000103,Hodgkin's granuloma NOS (disorder),n,via Query Table +187600004,"Malignant neoplasm of upper lip, external (disorder)",n,via Query Table +190026006,[M]Subacute leukemia NOS (morphologic abnormality),n,via Query Table +190162005,[X]Other leukemia of unspecified cell type (disorder),n,via Query Table +469881000000100,"[X]Diffuse non-Hodgkin's lymphoma, unspecified (disorder)",n,via Query Table +767511000000109,Secondary malignant neoplasm of large intestine and rectum (disorder),n,via Query Table +326701000000106,Clark melanoma level 4 (finding),n,via Query Table +467891000000106,"[X]Malignant neoplasm of peripheral nerves and autonomic nervous system, unspecified (disorder)",n,via Query Table +438331000000107,"[M]Serous cystadenocarcinoma, NOS (morphologic abnormality)",n,via Query Table +477531000000102,"[X]Malignant neoplasm of bone and articular cartilage, unspecified (disorder)",n,via Query Table +189871009,[M] Epithelioid hemangioendothelioma NOS (morphologic abnormality),n,via Query Table +189886003,[M]Chondrosarcoma NOS (morphologic abnormality),n,via Query Table +190115003,"[X]Malignant neoplasm of peripheral nerves and autonomic nervous system, unspecified (disorder)",n,via Query Table +189634009,[M]Clear cell adenoma or adenocarcinoma NOS (morphologic abnormality),n,via Query Table +1051141000000100,Hereditary nonpolyposis colon cancer,n,via Query Table +956561000000109,Malignant Melanoma Stage IV M1c ,n,via Query Table +565971000000101,Malignant lymphoma NOS of lymph nodes of multiple sites (disorder),n,via Query Table +863791000000103,Clinical stage C chronic lymphocytic leukaemia ,n,via Query Table +409471000000101,[M]Hepatobiliary tract adenomas and carcinomas (morphologic abnormality),n,via Query Table +408401000000103,[M]Medullary carcinoma NOS (morphologic abnormality),n,via Query Table +543391000000107,Secondary and unspecified malignant neoplasm of axilla and upper limb lymph nodes NOS (disorder),n,via Query Table +468291000000108,[M]Hairy naevus NOS (disorder),n,via Query Table +134332001,Mesothelial tumor morphology (qualifier value),n,via Query Table +313417009,[M]Tibial adamantinoma (morphologic abnormality),n,via Query Table +398601000000108,[X]Malignant neoplasm of other specified male genital organs (disorder),n,via Query Table +6357002,AIDS with primary lymphoma of the brain (disorder),n,via Query Table +189666004,[M]Sweat gland adenocarcinoma (morphologic abnormality),n,via Query Table +453011000000105,[M]Lymphosarcoma cell leukaemia NOS (morphologic abnormality),n,via Query Table +833631000000102,Cutaneous/peripheral T-cell lymphoma,n,via Query Table +478081000000106,[M]Brenner tumours (morphologic abnormality),n,via Query Table +190138000,[X]Malignant neoplasm of thyroid and other endocrine glands (disorder),n,via Query Table +285763005,Acute myeloblastic leukemia - undifferentiated (disorder),n,via Query Table diff --git a/codelists/opensafely-chronic-cardiac-disease-snomed.csv b/codelists/opensafely-chronic-cardiac-disease-snomed.csv new file mode 100644 index 0000000..ff6f6c0 --- /dev/null +++ b/codelists/opensafely-chronic-cardiac-disease-snomed.csv @@ -0,0 +1,2834 @@ +id,name,active,notes +253528005,Arrhythmogenic right ventricular dysplasia (disorder),y,direct mapping +41893002,Left ventricular-right atrial communication (disorder),y,direct mapping +253706007,Anomalous origin of coronary artery from pulmonary arterial tree (disorder),y,direct mapping +253431009,Hypoplasia of common atrioventricular valve (disorder),y,direct mapping +698377004,Coronary angioplasty planned (situation),y,direct mapping +281091000,Ischemic myocardial dysfunction (disorder),y,direct mapping +253274005,Abnormal atrioventricular connection (disorder),y,direct mapping +253532004,Right ventricular outflow obstruction - tubular (disorder),y,direct mapping +253289001,Left sided atrium connecting to ventricle of indeterminate morphology (disorder),y,direct mapping +70602002,Pseudocoarctation of aorta (disorder),y,direct mapping +253318000,Inferior vena cava connecting to coronary sinus (disorder),y,direct mapping +54225002,Malignant hypertensive heart disease (disorder),y,direct mapping +253677005,Postductal interruption of aorta (disorder),y,direct mapping +52029003,Primary familial dilated cardiomyopathy (disorder),y,direct mapping +253407004,Arcade abnormality of mitral chordae tendinae (disorder),y,direct mapping +251024009,Coronary graft stenosis (disorder),y,direct mapping +253343006,Anomalous valve of coronary sinus (disorder),y,direct mapping +253379003,Straddling tricuspid valve (disorder),y,direct mapping +253678000,Thoracic aortic coarctation (disorder),y,direct mapping +314116003,Post infarct angina (disorder),y,direct mapping +253592001,Pulmonary valve atresia without ventricular outflow tract (disorder),y,direct mapping +233875006,Post-myocarditic cardiomyopathy (disorder),y,direct mapping +847041000000109,Amyloid cardiomyopathy (disorder),y,direct mapping +38385001,Persistent left posterior cardinal vein (disorder),y,direct mapping +253531006,Right ventricular outflow obstruction - localized (disorder),y,direct mapping +204312002,Ventricular septal defect between left ventricle and right atrium (disorder),y,direct mapping +175042007,Revision of implantation of thoracic artery into heart (procedure),y,direct mapping +175085003,Replacement of coronary arteries using multiple methods (procedure),y,direct mapping +232731009,Percutaneous thrombolysis of coronary artery (procedure),y,direct mapping +253384009,Accessory tissue on tricuspid leaflet (disorder),y,direct mapping +253676001,Postductal aortic stenosis (disorder),y,direct mapping +232739006,Removal of foreign body from coronary artery (procedure),y,direct mapping +253650001,Aorta to right ventricle tunnel (disorder),y,direct mapping +837091000000100,History of acute coronary syndrome (situation),y,direct mapping +93353003,Congenital malposition of subclavian artery (disorder),y,direct mapping +394710008,First myocardial infarction (disorder),y,direct mapping +129574000,Postoperative myocardial infarction (disorder),y,direct mapping +253346003,Right atrial appendage - left - juxtaposition (disorder),y,direct mapping +253322005,Obstructed pulmonary venous connection (disorder),y,direct mapping +253453006,Hypoplastic common atrioventricular valve papillary muscle (disorder),y,direct mapping +253628002,Pulmonary trunk absent with non-confluent pulmonary arteries (disorder),y,direct mapping +253568009,Doubly committed subarterial ventricular septal defect (disorder),y,direct mapping +268184003,Hypoplasia of aorta (disorder),y,direct mapping +426104007,Repair of rupture of coronary artery (procedure),y,direct mapping +1755008,Old myocardial infarction (disorder),y,direct mapping +76593002,Acute myocardial infarction of inferoposterior wall (disorder),y,direct mapping +410023005,Directional atherectomy (procedure),y,direct mapping +253370004,Sinus venosus defect with overriding inferior vena cava (disorder),y,direct mapping +395105005,Heart failure confirmed (situation),y,direct mapping +308066006,History of angina in last year (situation),y,direct mapping +42343007,Congestive heart failure (disorder),y,direct mapping +174814003,Repair of tetralogy of Fallot (procedure),y,direct mapping +812001000000102,Heart failure self-management plan agreed (finding),y,direct mapping +85081000,Common arterial trunk and widely separate origin of pulmonary arteries (disorder),y,direct mapping +37104009,Congenital enlargement of coronary sinus (disorder),y,direct mapping +414795007,Myocardial ischemia (disorder),y,direct mapping +253401003,Absent mitral leaflets (disorder),y,direct mapping +4374004,Congenital anomaly of tricuspid valve (disorder),y,direct mapping +428558001,Repositioning of transposed great arteries (procedure),y,direct mapping +253476009,Right atrioventricular valve chordae to outlet septum (disorder),y,direct mapping +253512000,Tetralogy of Fallot with pulmonary stenosis (disorder),y,direct mapping +194823009,Acute coronary insufficiency (disorder),y,direct mapping +253629005,Pulmonary trunk absent with absent pulmonary artery (disorder),y,direct mapping +277639002,Sepsis-associated right ventricular failure (disorder),y,direct mapping +703518004,Rastelli creation of conduit between right ventricle and pulmonary artery (procedure),y,direct mapping +425785006,Repair of tetralogy of Fallot with absent pulmonary valve (procedure),y,direct mapping +422348008,Andersen Tawil syndrome (disorder),y,direct mapping +253548003,Indeterminate ventricular outflow tract obstruction (disorder),y,direct mapping +253273004,Cardiac septal defects (disorder),y,direct mapping +253281003,Double inlet ventricle (disorder),y,direct mapping +232735000,Operation for coronary artery fistula (procedure),y,direct mapping +253642005,Diffuse supravalvar aortic stenosis (disorder),y,direct mapping +68466008,"Removal of coronary artery obstruction by percutaneous transluminal balloon, single vessel (procedure)",y,direct mapping +253455004,Right atrioventricular valve atresia (disorder),y,direct mapping +56675007,Acute heart failure (disorder),y,direct mapping +111321007,Right aortic arch (disorder),y,direct mapping +253305008,Solitary arterial trunk (disorder),y,direct mapping +717501000000108,Heart failure monitoring verbal invitation (procedure),y,direct mapping +253637002,Anomalous origin of left pulmonary artery from ascending aorta (disorder),y,direct mapping +426300009,Tachycardia-induced cardiomyopathy (disorder),y,direct mapping +447672009,Ventricular septal defect with posterior malaligned outlet septum with overriding pulmonary valve (disorder),y,direct mapping +253324006,Coronary sinus defect in left atrium (disorder),y,direct mapping +50570003,Aneurysm of coronary vessels (disorder),y,direct mapping +233127003,Rev operation (procedure),y,direct mapping +59631007,Anomalous pulmonary venous drainage (disorder),y,direct mapping +253524007,Two chambered right ventricle (disorder),y,direct mapping +36969009,Placement of stent in coronary artery (procedure),y,direct mapping +281170005,Arrhythmogenic right ventricular cardiomyopathy (disorder),y,direct mapping +65340007,Aneurysm of heart (disorder),y,direct mapping +175037004,Revision of bypass for one coronary artery (procedure),y,direct mapping +233871002,Congestive obstructive cardiomyopathy (disorder),y,direct mapping +253721001,Single coronary artery fistula (disorder),y,direct mapping +253374008,Congenital abnormality of atrioventricular valves in atrioventricular septal defect (disorder),y,direct mapping +253683008,Interrupted aortic arch between left common carotid and brachiocephalic artery (disorder),y,direct mapping +253578007,Congenital abnormality of arterial valves (disorder),y,direct mapping +275253006,Right internal mammary artery sequential anastomosis (procedure),y,direct mapping +240567009,Syphilitic coronary artery disease (disorder),y,direct mapping +15990001,Acute myocardial infarction of posterolateral wall (disorder),y,direct mapping +715971000000103,Excepted from myocardial infarction quality indicators - informed dissent (finding),y,direct mapping +86299006,Tetralogy of Fallot (disorder),y,direct mapping +427109009,Repair of arteriovenous malformation of coronary artery (procedure),y,direct mapping +253732001,Totally absent pericardium (disorder),y,direct mapping +204297006,Total great vessel transposition (disorder),y,direct mapping +57054005,Acute myocardial infarction (disorder),y,direct mapping +67278007,Congenital stenosis of pulmonary valve (disorder),y,direct mapping +253658008,Persisting fifth aortic arch (disorder),y,direct mapping +253412003,Fused mitral papillary muscles (disorder),y,direct mapping +54329005,Acute myocardial infarction of anterior wall (disorder),y,direct mapping +28574005,Congenital anomaly of coronary artery (disorder),y,direct mapping +253634009,Anomalous origin of right pulmonary artery from ascending aorta (disorder),y,direct mapping +277192005,Coronary artery graft placement (procedure),y,direct mapping +253496001,Ebstein's anomaly of left atrioventricular valve (disorder),y,direct mapping +253280002,Abnormal atrioventricular connection - univentricular (disorder),y,direct mapping +77978002,Persistent left superior vena cava (disorder),y,direct mapping +253441007,Double orifice of common atrioventricular valve (disorder),y,direct mapping +194857001,Subsequent myocardial infarction of anterior wall (disorder),y,direct mapping +253590009,Pulmonary atresia with intact ventricular septum (disorder),y,direct mapping +414024009,Disorder of coronary artery (disorder),y,direct mapping +253477000,Arcade abnormality of right atrioventricular valve chordae (disorder),y,direct mapping +82458004,Congenital stenosis of mitral valve (disorder),y,direct mapping +443502000,Atherosclerosis of coronary artery (disorder),y,direct mapping +233821000,New onset angina (disorder),y,direct mapping +253518001,Diffuse hypoplasia of right ventricle (disorder),y,direct mapping +194781004,Hypertensive heart and renal disease with both (congestive) heart failure and renal failure (disorder),y,direct mapping +175076003,Diagnostic transluminal operations on coronary artery (procedure),y,direct mapping +253338004,Mirror imaged atria (disorder),y,direct mapping +232723004,Coronary artery bypass grafts x 5 (procedure),y,direct mapping +253290005,Absent left sided atrioventricular connection (disorder),y,direct mapping +199221000000102,Transfer of care from paediatric congenital heart service (procedure),y,direct mapping +233841005,Old lateral myocardial infarction (disorder),y,direct mapping +253415001,Atrioventricular septal defect - isolated ventricular component (disorder),y,direct mapping +253555001,Perimembranous ventricular septal defect with extension to all right ventricular components (disorder),y,direct mapping +95268002,Sinus venosus atrial septal defect (disorder),y,direct mapping +204306007,Pentalogy of Fallot (disorder),y,direct mapping +111322000,Congenital anomaly of pulmonary veins (disorder),y,direct mapping +175071008,Percutaneous transluminal coronary thrombolysis using streptokinase (procedure),y,direct mapping +30288003,Ventricular septal defect (disorder),y,direct mapping +253437008,Common atrioventricular valve leaflet abnormality (disorder),y,direct mapping +174822005,Atrial inversion operation using atrial wall (procedure),y,direct mapping +233832000,Acute non-Q wave infarction - inferolateral (disorder),y,direct mapping +233843008,Silent myocardial infarction (disorder),y,direct mapping +88805009,Chronic congestive heart failure (disorder),y,direct mapping +275521001,Blue baby (disorder),y,direct mapping +42402006,Kartagener syndrome (disorder),y,direct mapping +87648004,Chronic rheumatic heart disease (disorder),y,direct mapping +199006004,"Pre-existing hypertensive heart disease complicating pregnancy, childbirth and the puerperium (disorder)",y,direct mapping +204296002,Discordant ventriculoarterial connection (disorder),y,direct mapping +204300001,Incomplete great vessel transposition (disorder),y,direct mapping +13213009,Congenital heart disease (disorder),y,direct mapping +123661007,Levoatrial cardinal vein (disorder),y,direct mapping +253508006,Absent left atrioventricular valve papillary muscle (disorder),y,direct mapping +253627007,Pulmonary trunk absent with confluent pulmonary arteries (disorder),y,direct mapping +204443008,Pulmonary artery atresia (disorder),y,direct mapping +253265008,Congenital cardiac rotation (disorder),y,direct mapping +310490008,Division of coronary arteriovenous fistula (procedure),y,direct mapping +253615009,Anomalies of the aorta excluding coarction (disorder),y,direct mapping +397193006,Percutaneous transluminal coronary angioplasty by rotoablation (procedure),y,direct mapping +253438003,Common atrioventricular valve prolapse (disorder),y,direct mapping +253707003,Anomalous origin of coronary artery from right pulmonary artery (disorder),y,direct mapping +86252004,Agenesis of pulmonary artery (disorder),y,direct mapping +300995000,Exercise-induced angina (disorder),y,direct mapping +73795002,Acute myocardial infarction of inferior wall (disorder),y,direct mapping +225566008,Ischemic chest pain (finding),y,direct mapping +233829003,Acute Q wave infarction - inferior (disorder),y,direct mapping +253472006,Right atrioventricular valve leaflet dysplasia (disorder),y,direct mapping +253715000,Intramural coronary artery course (disorder),y,direct mapping +79009004,Acute myocardial infarction of septum (disorder),y,direct mapping +253294001,Right sided atrium connecting to ventricle of indeterminate morphology (disorder),y,direct mapping +2583009,Chiari's network (disorder),y,direct mapping +253724009,Coronary fistulae from left ventricle (disorder),y,direct mapping +811901000000107,Angina self-management plan agreed (finding),y,direct mapping +315614006,Coronary heart disease annual review (procedure),y,direct mapping +232722009,Coronary artery bypass grafts x 4 (procedure),y,direct mapping +174809002,Heterotopic allotransplant of heart (procedure),y,direct mapping +93271008,Congenital hypoplasia of mitral valve (disorder),y,direct mapping +84114007,Heart failure (disorder),y,direct mapping +253607006,Hypoplasia of aortic valve cusp (disorder),y,direct mapping +253562005,Ventricular septal defect with absent outlet septum and overriding truncal valve (disorder),y,direct mapping +253359006,Left atrial endocardial fibroelastosis (disorder),y,direct mapping +40964007,Chronic cardiac valvulitis (disorder),y,direct mapping +253264007,"Congenital heart disease, septal and bulbar anomalies (disorder)",y,direct mapping +253418004,Atrioventricular septal defect - ventricular component under superior bridging leaflet (disorder),y,direct mapping +22462001,Chronic bacterial endocarditis (disorder),y,direct mapping +253291009,Right sided atrium connecting to right ventricle (disorder),y,direct mapping +253563000,Muscular ventricular septal defect in inlet septum (disorder),y,direct mapping +253708008,Anomalous origin of coronary artery from left pulmonary artery (disorder),y,direct mapping +29928006,Congenital insufficiency of mitral valve (disorder),y,direct mapping +253500004,Left atrioventricular valve leaflet dysplasia (disorder),y,direct mapping +253633003,Anomalous origin of right pulmonary artery from ductus arteriosus (disorder),y,direct mapping +781051000000108,Has heart failure management plan (finding),y,direct mapping +87837008,Chronic pulmonary heart disease (disorder),y,direct mapping +253675002,Juxtaductal aortic coarctation (disorder),y,direct mapping +233831007,Acute Q wave infarction - inferolateral (disorder),y,direct mapping +175036008,Revision of bypass for coronary artery (procedure),y,direct mapping +175047001,Double implantation of mammary arteries into coronary arteries (procedure),y,direct mapping +253436004,Common atrioventricular valve stenosis (disorder),y,direct mapping +233840006,Old inferior myocardial infarction (disorder),y,direct mapping +447670001,Ventricular septal defect with anterior malaligned outlet septum with overriding pulmonary valve (disorder),y,direct mapping +234010000,Coronary artery perforation (disorder),y,direct mapping +6996004,Congenital absence of pulmonary valve (disorder),y,direct mapping +763641000000102,Referral to heart failure education group declined (situation),y,direct mapping +36110001,Congenital anomaly of pulmonary artery (disorder),y,direct mapping +204311009,Eisenmenger's complex (disorder),y,direct mapping +265481001,Double anastomosis of mammary arteries to coronary arteries (procedure),y,direct mapping +85232009,Left heart failure (disorder),y,direct mapping +253300003,Double outlet right ventricle with doubly committed ventricular septal defect (disorder),y,direct mapping +398754006,Restrictive cardiomyopathy with endomyocardial fibrosis (disorder),y,direct mapping +253691004,Stenosis of systemic to pulmonary artery collateral artery (disorder),y,direct mapping +253353007,Divided left atrium (disorder),y,direct mapping +233924009,Heart failure as a complication of care (disorder),y,direct mapping +204395001,Congenital aneurysm of heart (disorder),y,direct mapping +234029006,Coronary steal syndrome (disorder),y,direct mapping +399211009,History of myocardial infarction (situation),y,direct mapping +32413006,Transplantation of heart (procedure),y,direct mapping +233929004,Post-infarction mural thrombus (disorder),y,direct mapping +253434001,Common atrioventricular valve limited to one ventricle (disorder),y,direct mapping +268180007,Right hypoplastic heart syndrome (disorder),y,direct mapping +253652009,Right descending aorta (disorder),y,direct mapping +253465005,Absent right atrioventricular valve leaflets (disorder),y,direct mapping +253530007,Right ventricular outflow tract obstruction (disorder),y,direct mapping +174826008,Arterial switch operation (procedure),y,direct mapping +315348000,Asymptomatic coronary heart disease (disorder),y,direct mapping +233138003,Take down of total cavopulmonary connection (procedure),y,direct mapping +18546004,Congenital stenosis of aortic valve (disorder),y,direct mapping +308065005,History of myocardial infarction in last year (situation),y,direct mapping +195023001,Nutritional and metabolic cardiomyopathies (disorder),y,direct mapping +311796008,Postoperative subendocardial myocardial infarction (disorder),y,direct mapping +83119008,Congenital insufficiency of tricuspid valve (disorder),y,direct mapping +26900001,Coronary ostium stenosis (disorder),y,direct mapping +233825009,Acute Q wave infarction - anteroseptal (disorder),y,direct mapping +21981000,Single coronary artery (disorder),y,direct mapping +253515003,Ventricular septal defect in Fallot's tetralogy (disorder),y,direct mapping +218728005,Interrupted aortic arch (disorder),y,direct mapping +90828009,Primary restrictive cardiomyopathy (disorder),y,direct mapping +19092004,Holt-Oram syndrome (disorder),y,direct mapping +717481000000104,Excepted from heart failure quality indicators - patient unsuitable (finding),y,direct mapping +213152006,Heart-lung transplant failure and rejection (disorder),y,direct mapping +174810007,Revision of implantation of prosthetic heart (procedure),y,direct mapping +253668003,Isolation of subclavian artery (disorder),y,direct mapping +253601007,Aortic valve ring hypoplasia (disorder),y,direct mapping +401251008,Coronary heart disease monitoring second letter (finding),y,direct mapping +194780003,Hypertensive heart and renal disease with renal failure (disorder),y,direct mapping +253643000,Ascending aortic atresia (disorder),y,direct mapping +170595000,Angina control - poor (finding),y,direct mapping +253725005,Congenital coronary artery calcification (disorder),y,direct mapping +416158002,Right ventricular systolic dysfunction (disorder),y,direct mapping +194767001,Benign hypertensive heart disease with congestive cardiac failure (disorder),y,direct mapping +253304007,Solitary pulmonary trunk with aortic atresia (disorder),y,direct mapping +253593006,Imperforate pulmonary valve (disorder),y,direct mapping +253575005,Bilateral muscular infundibula (disorder),y,direct mapping +95234008,Retroesophageal aortic arch (disorder),y,direct mapping +61959006,Common truncus arteriosus (disorder),y,direct mapping +85053006,"Percutaneous transluminal coronary angioplasty, multiple vessels (procedure)",y,direct mapping +253397006,Overriding mitral valve (disorder),y,direct mapping +204357006,Ebstein's anomaly of tricuspid valve (disorder),y,direct mapping +194779001,Hypertensive heart and renal disease with (congestive) heart failure (disorder),y,direct mapping +300920004,Carotid atherosclerosis (disorder),y,direct mapping +416610007,Right ventricular diastolic dysfunction (disorder),y,direct mapping +810681000000101,Coronary microvascular disease (disorder),y,direct mapping +206586007,Congenital cardiac failure (disorder),y,direct mapping +175041000,Revision of connection of thoracic artery to coronary artery (procedure),y,direct mapping +194821006,Coronary thrombosis not resulting in myocardial infarction (disorder),y,direct mapping +233846000,Post-infarction ventricular septal defect (disorder),y,direct mapping +23063005,Congenital atresia of mitral valve (disorder),y,direct mapping +174815002,Correction of tetralogy of Fallot using valved right ventricular outflow conduit (procedure),y,direct mapping +253581002,Truncal valve stenosis (disorder),y,direct mapping +250983006,Bicuspid doming of aortic cusp (disorder),y,direct mapping +253299006,Double outlet right ventricle with noncommitted ventricular septal defect (disorder),y,direct mapping +253569001,Doubly committed subarterial ventricular septal defect with membranous septum extension (disorder),y,direct mapping +175029007,Prosthetic bypass of coronary artery (procedure),y,direct mapping +253657003,Cervical aortic arch (disorder),y,direct mapping +716621000000101,Heart failure monitoring third letter (procedure),y,direct mapping +253286008,Left sided atrium connecting to left ventricle (disorder),y,direct mapping +253602000,Commissural fusion of aortic valve (disorder),y,direct mapping +233826005,Acute non-Q wave infarction - anteroseptal (disorder),y,direct mapping +194843003,Double coronary vessel disease (disorder),y,direct mapping +232717009,Coronary artery bypass grafting (procedure),y,direct mapping +275514001,Impaired left ventricular function (finding),y,direct mapping +408471009,Cardiothoracic transplantation (qualifier value),y,direct mapping +28903008,Percutaneous angioscopy (procedure),y,direct mapping +86234004,Hypertensive heart AND renal disease (disorder),y,direct mapping +161504004,History of angina pectoris (situation),y,direct mapping +309814006,Aortocoronary bypass grafting (procedure),y,direct mapping +253295000,Abnormal ventriculoarterial connection (disorder),y,direct mapping +78069008,Chronic rheumatic pericarditis (disorder),y,direct mapping +253341008,Obstructive Eustachian valve (disorder),y,direct mapping +45237002,Congenital dilatation of aorta (disorder),y,direct mapping +41339005,Coronary angioplasty (procedure),y,direct mapping +40250003,Interatrial transposition of venous return (procedure),y,direct mapping +384678000,Transposition of coronary artery (procedure),y,direct mapping +109428005,Perimembranous ventricular septal defect (disorder),y,direct mapping +521691000000100,Heart failure resolved (finding),y,direct mapping +195025008,Cardiac glycogenosis (disorder),y,direct mapping +253624000,Pulmonary atresia with confluent pulmonary arteries (disorder),y,direct mapping +164869004,Electrocardiographic posterior/inferior infarct (finding),y,direct mapping +271573009,Congenital abnormality of thoracic aorta and pulmonary arteries (disorder),y,direct mapping +253336000,Isomerism of right atrial appendage (disorder),y,direct mapping +175066001,Percutaneous transluminal balloon angioplasty of bypass graft of coronary artery (procedure),y,direct mapping +253534003,Right ventricular outflow tract absent (disorder),y,direct mapping +240077004,Severe scapuloperoneal muscular dystrophy with cardiomyopathy (disorder),y,direct mapping +45471009,Endoscopy of coronary artery (procedure),y,direct mapping +341751000000103,Congenital dextroposition of heart (disorder),y,direct mapping +253689007,Major aortopulmonary collateral artery (disorder),y,direct mapping +94706008,Muscular ventricular septum defect (disorder),y,direct mapping +447698003,Ventricular septal defect with anterior malaligned outlet septum with overriding aortic valve (disorder),y,direct mapping +253382008,Double orifice of tricuspid valve (disorder),y,direct mapping +253566008,Muscular ventricular septal defect in marginal septum (disorder),y,direct mapping +253610004,Unicuspid aortic valve (disorder),y,direct mapping +253414002,Atrioventricular septal defect and common atrioventricular junction (disorder),y,direct mapping +286950001,Chronic rheumatic aortic valve disease (disorder),y,direct mapping +205769006,Situs inversus with levocardia (disorder),y,direct mapping +253426007,Double outlet left atrium (disorder),y,direct mapping +253357008,Left atrial appendage - right - juxtaposition (disorder),y,direct mapping +92506005,Biventricular congestive heart failure (disorder),y,direct mapping +398274000,Coronary artery thrombosis (disorder),y,direct mapping +247611000000109,Congenital heart condition monitoring (regime/therapy),y,direct mapping +204431007,Atresia and stenosis of aorta (disorder),y,direct mapping +445928005,Eisenmenger's syndrome (disorder),y,direct mapping +275215001,Left internal mammary artery single anastomosis (procedure),y,direct mapping +161502000,History of myocardial infarct at age less than sixty (situation),y,direct mapping +253360001,Left atrial hypoplasia (disorder),y,direct mapping +83521008,Dilated cardiomyopathy caused by alcohol (disorder),y,direct mapping +253481000,Fused right atrioventricular valve papillary muscles (disorder),y,direct mapping +22298006,Myocardial infarction (disorder),y,direct mapping +45492009,Congenital stenosis of superior vena cava (disorder),y,direct mapping +232724005,Coronary artery bypass grafts greater than 5 (procedure),y,direct mapping +253507001,Parachute malformation of left atrioventricular valve (disorder),y,direct mapping +203741000000101,Insertion of drug-eluting coronary artery stent (procedure),y,direct mapping +253663007,Vascular ring with left aortic arch (disorder),y,direct mapping +43736008,Rheumatic left ventricular failure (disorder),y,direct mapping +253556000,Ventricular septal defect with malaligned outlet septum to right (disorder),y,direct mapping +253430005,Imperforate common atrioventricular valve (disorder),y,direct mapping +756003,Chronic rheumatic myopericarditis (disorder),y,direct mapping +253527000,Congenital right ventricular aneurysm (disorder),y,direct mapping +384681005,Patch repair of coronary artery (procedure),y,direct mapping +253335001,Isomerism of atrial appendages (disorder),y,direct mapping +253393005,Fused tricuspid papillary muscle (disorder),y,direct mapping +426911005,Repair of double chambered right ventricle (procedure),y,direct mapping +199007008,"Pre-existing hypertensive heart and renal disease complicating pregnancy, childbirth and the puerperium (disorder)",y,direct mapping +17024001,Aortopulmonary window (disorder),y,direct mapping +195147006,Atrial thrombosis (disorder),y,direct mapping +16972009,Congenital aneurysm of aorta (disorder),y,direct mapping +253489003,Overriding left atrioventricular valve (disorder),y,direct mapping +253480004,Absent right atrioventricular valve papillary muscle (disorder),y,direct mapping +27637000,Dextrocardia (disorder),y,direct mapping +253395003,Mitral valve dysplasia (disorder),y,direct mapping +253599005,Bicuspid pulmonary valve (disorder),y,direct mapping +78643003,Postcardiotomy syndrome (disorder),y,direct mapping +46109009,Subendocardial ischemia (disorder),y,direct mapping +175061006,Transection of coronary artery muscle bridge (procedure),y,direct mapping +389026000,Ascites (disorder),y,direct mapping +253387002,Tricuspid chordae tendinae too short (disorder),y,direct mapping +233112003,Repair of Fallot-type double outlet right ventricle (procedure),y,direct mapping +75372006,Congenital anomaly of mitral valve (disorder),y,direct mapping +232719007,Coronary artery bypass graft x 1 (procedure),y,direct mapping +253419007,Atrioventricular septal defect with ventricular component under superior bridging leaflet with chords at crest ventricular septum (disorder),y,direct mapping +441541008,Takotsubo cardiomyopathy (disorder),y,direct mapping +194809007,Acute atrial infarction (disorder),y,direct mapping +253302006,Single outlet ventriculoarterial connection (disorder),y,direct mapping +311792005,Postoperative transmural myocardial infarction of anterior wall (disorder),y,direct mapping +253713007,Coronary orifice atresia (disorder),y,direct mapping +15459006,Endocardial cushion defect (disorder),y,direct mapping +232720001,Coronary artery bypass grafts x 2 (procedure),y,direct mapping +703272007,Heart failure with reduced ejection fraction (disorder),y,direct mapping +286721000000101,Review of patient at risk from coronary heart disease (procedure),y,direct mapping +233835003,Acute widespread myocardial infarction (disorder),y,direct mapping +253411005,Absent mitral papillary muscle (disorder),y,direct mapping +253381001,Absent tricuspid leaflet (disorder),y,direct mapping +111323005,Total anomalous pulmonary venous return (disorder),y,direct mapping +253717008,Coronary artery runs between aorta and pulmonary trunk (disorder),y,direct mapping +253625004,Pulmonary atresia with absent pulmonary artery (disorder),y,direct mapping +253432002,Dysplasia of common atrioventricular valve (disorder),y,direct mapping +161503005,History of myocardial infarct at age greater than sixty (situation),y,direct mapping +191372008,Polycythemia due to cyanotic heart disease (disorder),y,direct mapping +253542002,Abnormal left ventricular muscle band (disorder),y,direct mapping +233877003,Restrictive cardiomyopathy without endomyocardial fibrosis (disorder),y,direct mapping +253413008,Hypoplastic mitral papillary muscle (disorder),y,direct mapping +253458002,Right atrioventricular valve hypoplasia (disorder),y,direct mapping +253422009,Atrioventricular septal defect - ventricular component under inferior bridging leaflet (disorder),y,direct mapping +253482007,Hypoplastic right atrioventricular valve papillary muscle (disorder),y,direct mapping +204339005,Congenital pulmonary valve abnormality (disorder),y,direct mapping +253621008,Pulmonary trunk stenosis (disorder),y,direct mapping +253326008,Coronary sinus orifice atresia (disorder),y,direct mapping +20738002,Endarterectomy of coronary artery (procedure),y,direct mapping +19249002,Premature closure of foramen ovale (disorder),y,direct mapping +49584005,Acute cor pulmonale (disorder),y,direct mapping +204379001,Congenital stricture of coronary artery (disorder),y,direct mapping +253720000,Congenital coronary arteriovenous fistula (disorder),y,direct mapping +311793000,Postoperative transmural myocardial infarction of inferior wall (disorder),y,direct mapping +19242006,Pulmonary edema (disorder),y,direct mapping +164871004,Lateral infarction on electrocardiogram (finding),y,direct mapping +253345004,Right atrial appendage absent (disorder),y,direct mapping +232738003,Ligation of coronary artery (procedure),y,direct mapping +175045009,Connection of mammary artery to coronary artery (procedure),y,direct mapping +232729000,Percutaneous high speed rotational coronary atherectomy (procedure),y,direct mapping +73699003,Common arterial trunk and common origin of pulmonary arteries (disorder),y,direct mapping +274947007,Divided right atrium (disorder),y,direct mapping +253288009,Left sided atrium connecting to both ventricles (disorder),y,direct mapping +401250009,Coronary heart disease monitoring 1st letter (finding),y,direct mapping +253714001,Abnormal coronary artery course (disorder),y,direct mapping +90539001,Ventricular aneurysm (disorder),y,direct mapping +429589006,Left ventricular cardiac dysfunction (disorder),y,direct mapping +253539008,Hypoplasia of left ventricular outflow tract (disorder),y,direct mapping +253391007,Parachute malformation of tricuspid valve (disorder),y,direct mapping +401252001,Coronary heart disease monitoring third letter (finding),y,direct mapping +253711009,Coronary orifice asymmetrical (disorder),y,direct mapping +253425006,Double outlet right atrium (disorder),y,direct mapping +253484008,Left atrioventricular valve atresia (disorder),y,direct mapping +170597008,Angina control - worsening (finding),y,direct mapping +174808005,Xenotransplant of heart (procedure),y,direct mapping +253278008,Ambiguous atrioventricular connection (disorder),y,direct mapping +232726007,Percutaneous endarterectomy of coronary artery (procedure),y,direct mapping +204398004,Congenital epicardial cyst (disorder),y,direct mapping +309518001,Right ventricular thrombus (disorder),y,direct mapping +204351007,Fallot's trilogy (disorder),y,direct mapping +253378006,Overriding tricuspid valve (disorder),y,direct mapping +36233006,Congenital stenosis of tricuspid valve (disorder),y,direct mapping +56501009,Rheumatic adherent pericardium (disorder),y,direct mapping +253603005,Eccentric opening of aortic valve (disorder),y,direct mapping +174830006,Repair of total anomalous pulmonary venous connection (procedure),y,direct mapping +253719006,Circumflex runs posterior to aorta (disorder),y,direct mapping +253586007,Pulmonary valve ring hypoplasia (disorder),y,direct mapping +281093002,Hibernating myocardium (disorder),y,direct mapping +851521000000102,Heart failure clinical pathway (regime/therapy),y,direct mapping +853561000000109,Referral to Angina Plan self-management programme (procedure),y,direct mapping +233823002,Silent myocardial ischemia (disorder),y,direct mapping +12075007,Congenital hypoplasia of ascending aorta (disorder),y,direct mapping +194845005,Acquired atrioventricular fistula of heart (disorder),y,direct mapping +36221001,Benign hypertensive heart disease (disorder),y,direct mapping +40541001,Acute pulmonary edema (disorder),y,direct mapping +109430007,Multiple muscular ventricular septum defect (disorder),y,direct mapping +253445003,Common atrioventricular valve chordae too short (disorder),y,direct mapping +232737008,Embolization of coronary artery fistula (procedure),y,direct mapping +233836002,Acute Q wave infarction - widespread (disorder),y,direct mapping +253272009,Congenital abnormality of cardiac connection (disorder),y,direct mapping +421704003,New York Heart Association Classification - Class II (finding),y,direct mapping +427188004,Repair of double outlet right ventricle with intraventricular tunnel (procedure),y,direct mapping +253553008,Perimembranous ventricular septal defect with extension to right ventricular trabecular component (disorder),y,direct mapping +268174004,Bulbus cordis and cardiac septal closure anomalies (disorder),y,direct mapping +775171000000109,Angina self management plan completed (situation),y,direct mapping +233880002,Chronic myocardial disorder caused by chemical or external agent (disorder),y,direct mapping +253405007,Accessory tissue on mitral leaflet (disorder),y,direct mapping +233834004,Acute non-Q wave infarction - lateral (disorder),y,direct mapping +253546004,Left ventricular outflow tract obstruction (disorder),y,direct mapping +813991000000101,Education about deteriorating heart failure (procedure),y,direct mapping +70422006,Acute subendocardial infarction (disorder),y,direct mapping +253700001,Variant coronary origin from aortic sinus (disorder),y,direct mapping +268185002,Supravalvar aortic stenosis (disorder),y,direct mapping +174802006,Allotransplant of heart and lung (procedure),y,direct mapping +253283000,Double inlet left ventricle (disorder),y,direct mapping +736968006,Aortocoronary artery bypass of three coronary arteries with saphenous vein graft (procedure),y,direct mapping +394659003,Acute coronary syndrome (disorder),y,direct mapping +775161000000102,Angina self management plan commenced (situation),y,direct mapping +427886002,Total cavopulmonary connection with lateral atrial tunnel (procedure),y,direct mapping +401314000,Acute non-ST segment elevation myocardial infarction (disorder),y,direct mapping +253376005,Tricuspid annulus hypoplasia (disorder),y,direct mapping +253722008,Multiple coronary artery fistulae (disorder),y,direct mapping +253559007,Ventricular septal defect with malaligned outlet septum to left (disorder),y,direct mapping +264503005,Aneurysm of membranous septum (disorder),y,direct mapping +194802003,True posterior myocardial infarction (disorder),y,direct mapping +399261000,History of coronary artery bypass grafting (situation),y,direct mapping +308068007,History of treatment for ischemic heart disease (situation),y,direct mapping +253267000,Congenital abnormality of relationship of cardiac component (disorder),y,direct mapping +205834002,Acardia (disorder),y,direct mapping +412787009,"Intellectual disability, congenital heart disease, blepharophimosis, blepharoptosis and hypoplastic teeth (disorder)",y,direct mapping +253565007,Muscular ventricular septal defect in apical trabecular septum (disorder),y,direct mapping +194842008,Single coronary vessel disease (disorder),y,direct mapping +253420001,Atrioventricular septal defect with ventricular component under superior bridging leaflet with chords to papillary muscle on right ventricular side septum (disorder),y,direct mapping +253554002,Perimembranous ventricular septal defect with extension to right ventricular outlet (disorder),y,direct mapping +253574009,Subaortic infundibulum (disorder),y,direct mapping +410431009,Cardiorespiratory failure (disorder),y,direct mapping +253547008,Left ventricular outflow tract atresia (disorder),y,direct mapping +395723006,Operation for transposition of great vessels (procedure),y,direct mapping +51442005,Congenital atresia of aortic valve (disorder),y,direct mapping +315608004,Cardiomyopathy in Duchenne muscular dystrophy (disorder),y,direct mapping +78495000,Cleft leaflet of mitral valve (disorder),y,direct mapping +717171000000109,Exception reporting - coronary heart disease quality indicators (finding),y,direct mapping +174833008,Correction of total anomalous pulmonary venous connection to infradiaphragmatic vessel (procedure),y,direct mapping +7368005,Double outlet left ventricle (disorder),y,direct mapping +314207007,Non-Q wave myocardial infarction (disorder),y,direct mapping +715951000000107,Exception reporting - heart failure quality indicators (finding),y,direct mapping +269299003,Cardiac insufficiency as a complication of care (disorder),y,direct mapping +253456003,Imperforate right atrioventricular valve (disorder),y,direct mapping +194849004,Generalized ischemic myocardial dysfunction (disorder),y,direct mapping +233873004,Hypertrophic cardiomyopathy (disorder),y,direct mapping +717541000000106,Exception reporting - myocardial infarction quality indicators (finding),y,direct mapping +286947004,Chronic rheumatic mitral valve (disorder),y,direct mapping +307140009,Acute non-Q wave infarction (disorder),y,direct mapping +253688004,Collaterals to pulmonary arteries (disorder),y,direct mapping +194868001,"Thrombosis of atrium, auricular appendage, and ventricle due to and following acute myocardial infarction (disorder)",y,direct mapping +407596008,Echocardiogram shows left ventricular systolic dysfunction (finding),y,direct mapping +276514007,Neonatal cardiac failure (disorder),y,direct mapping +253373002,Atrioventricular septal defect - isolated atrial component (disorder),y,direct mapping +447671002,Ventricular septal defect with posterior malaligned outlet septum with overriding aortic valve (disorder),y,direct mapping +315026000,Transient myocardial ischemia (disorder),y,direct mapping +2829000,Uhl's disease (disorder),y,direct mapping +253487001,Left atrioventricular valve hypoplasia (disorder),y,direct mapping +204352000,Supernumerary pulmonary valve cusps (disorder),y,direct mapping +253544001,Congenital left ventricular aneurysm (disorder),y,direct mapping +253632008,Abnormal origin of right pulmonary artery (disorder),y,direct mapping +64077000,Myocardial degeneration (disorder),y,direct mapping +461105005,Anomalous origin of coronary artery from aorta (disorder),y,direct mapping +264086008,Malaligned outlet septum (disorder),y,direct mapping +16567006,Mesocardia (disorder),y,direct mapping +175050003,Single implantation of mammary artery into coronary artery (procedure),y,direct mapping +253389004,Tricuspid chordae tendinae to outlet septum (disorder),y,direct mapping +90383006,Congenital absence of aorta (disorder),y,direct mapping +204362007,Parachute malformation of mitral valve (disorder),y,direct mapping +253567004,Muscular ventricular septal defect in outlet septum (disorder),y,direct mapping +21470009,Syncope anginosa (disorder),y,direct mapping +60106004,Common arterial trunk and separate origin of pulmonary arteries (disorder),y,direct mapping +265467003,Atrial inversion operation (procedure),y,direct mapping +253504008,Left atrioventricular valve chordae to outlet septum (disorder),y,direct mapping +401303003,Acute ST segment elevation myocardial infarction (disorder),y,direct mapping +83698002,Complete repair of tetralogy of Fallot with transannular patch (procedure),y,direct mapping +60232001,Cleft leaflet of tricuspid valve (disorder),y,direct mapping +275227003,Myocardial revascularization (procedure),y,direct mapping +717531000000102,Heart failure monitoring telephone invitation (procedure),y,direct mapping +175115008,Transluminal maintenance of heart assist system (procedure),y,direct mapping +253452001,Fused common atrioventricular valve papillary muscle (disorder),y,direct mapping +287280009,Ligation of coronary arteriovenous fistula (procedure),y,direct mapping +37034001,Ligation of arteriovenous fistula of coronary artery (procedure),y,direct mapping +78250005,Ectopia cordis (disorder),y,direct mapping +232721002,Coronary artery bypass grafts x 3 (procedure),y,direct mapping +253448001,Arcade abnormality of common atrioventricular valve chordae (disorder),y,direct mapping +261756009,Coronary interposition technique (procedure),y,direct mapping +253329001,Ductus venosus abnormality (disorder),y,direct mapping +20529002,Secondary dilated cardiomyopathy (disorder),y,direct mapping +27097002,Danish type familial amyloid cardiomyopathy (disorder),y,direct mapping +371068009,Myocardial infarction with complication (disorder),y,direct mapping +194856005,Subsequent myocardial infarction (disorder),y,direct mapping +253511007,Congenital abnormality of ventricles and ventricular septum (disorder),y,direct mapping +10633002,Acute congestive heart failure (disorder),y,direct mapping +253703004,Anomalous origin of coronary artery from non-facing sinus (disorder),y,direct mapping +1871002,Repair of aneurysm of coronary artery (procedure),y,direct mapping +204456001,Subdiaphragmatic total anomalous pulmonary venous return (disorder),y,direct mapping +247361000000100,Heart failure 6 month review (regime/therapy),y,direct mapping +253672004,Preductal aortic stenosis (disorder),y,direct mapping +161666008,History of heart recipient (situation),y,direct mapping +128404006,Right heart failure (disorder),y,direct mapping +253417009,Atrioventricular septal defect - ventricular component (disorder),y,direct mapping +253270001,Abnormal relationship of aortic orifice to pulmonary orifice (disorder),y,direct mapping +415295002,Restrictive cardiomyopathy (disorder),y,direct mapping +204399007,Hemicardia (disorder),y,direct mapping +253328009,Coronary sinus to left ventricle fistula (disorder),y,direct mapping +253543007,Primary left ventricular endocardial fibroelastosis (disorder),y,direct mapping +253597007,Accessory tissue on pulmonary valve cusp (disorder),y,direct mapping +253660005,Double aortic arch with both patent (disorder),y,direct mapping +253614008,Tubular hypoplasia of aorta (disorder),y,direct mapping +716211000000105,Excepted from cardiovascular disease quality indicators - informed dissent (finding),y,direct mapping +253690003,Systemic to pulmonary collateral artery (disorder),y,direct mapping +253520003,Hypoplasia of right ventricular outflow tract (disorder),y,direct mapping +5230009,Congenital absence of coronary artery (disorder),y,direct mapping +74218008,Coronary artery arising from main pulmonary artery (disorder),y,direct mapping +253570000,Doubly committed subarterial ventricular septal defect with muscular posterior inferior rim (disorder),y,direct mapping +789621000000105,Preferred place of care for next exacerbation of heart failure (finding),y,direct mapping +304914007,Acute Q wave myocardial infarction (disorder),y,direct mapping +233828006,Acute non-Q wave infarction - anterolateral (disorder),y,direct mapping +204363002,Supernumerary cusps of the mitral valve (disorder),y,direct mapping +253443005,Ebstein's anomaly of common atrioventricular valve (disorder),y,direct mapping +195020003,Hypertrophic cardiomyopathy without obstruction (disorder),y,direct mapping +287277008,Indirect heart revascularization (procedure),y,direct mapping +253269002,Criss-cross heart (disorder),y,direct mapping +253600008,Quadricuspid pulmonary valve (disorder),y,direct mapping +420913000,New York Heart Association Classification - Class III (finding),y,direct mapping +253510008,Hypoplastic left atrioventricular valve papillary muscle (disorder),y,direct mapping +174832003,Correction of total anomalous pulmonary venous connection to coronary sinus (procedure),y,direct mapping +253523001,Primary right ventricular endocardial fibroelastosis (disorder),y,direct mapping +253550006,Multiple ventricular septal defects (disorder),y,direct mapping +224161000000105,Conversion of atrial pulmonary anastomosis to total pulmonary connection (procedure),y,direct mapping +10451007,Double aortic arch (disorder),y,direct mapping +194867006,Rupture of papillary muscle as current complication following acute myocardial infarction (disorder),y,direct mapping +195112003,Compensated cardiac failure (disorder),y,direct mapping +79955004,Chronic cor pulmonale (disorder),y,direct mapping +204330009,Common atrioventricular-type ventricular septal defect (disorder),y,direct mapping +66052004,Benign hypertensive heart AND renal disease (disorder),y,direct mapping +233126007,Repair of double outlet right ventricle (procedure),y,direct mapping +72352009,Bicuspid aortic valve (disorder),y,direct mapping +315287002,Diabetes mellitus insulin-glucose infusion in acute myocardial infarction (procedure),y,direct mapping +424045003,Myocardial bridge of coronary artery (disorder),y,direct mapping +204448004,Atresia of pulmonary artery with septal defect (disorder),y,direct mapping +233837006,Acute non-Q wave infarction - widespread (disorder),y,direct mapping +253545000,Left ventricular outflow tract abnormality (disorder),y,direct mapping +253402005,Double orifice of mitral valve (disorder),y,direct mapping +716971000000109,Heart failure monitoring first letter (procedure),y,direct mapping +170594001,Angina control - good (finding),y,direct mapping +233830008,Acute non-Q wave infarction - inferior (disorder),y,direct mapping +253495002,Double orifice of left atrioventricular valve (disorder),y,direct mapping +204423002,Anomalous origin of the aortic arch (disorder),y,direct mapping +309519009,Left ventricular thrombus (disorder),y,direct mapping +426902005,Combined atrial switch and arterial switch operation (procedure),y,direct mapping +29843007,Coronary atherectomy by laser (procedure),y,direct mapping +253321003,Anomalous termination of right pulmonary vein (disorder),y,direct mapping +59877000,Congenital anomaly of aorta (disorder),y,direct mapping +19057007,Status anginosus (disorder),y,direct mapping +194863005,Atrial septal defect due to and following acute myocardial infarction (disorder),y,direct mapping +253312004,Absent bridging vein (disorder),y,direct mapping +253271002,Mirror-imaged heart (disorder),y,direct mapping +253386006,Arcade abnormality of tricuspid chordae tendinae (disorder),y,direct mapping +872361000000105,Discussion about heart failure care plan (procedure),y,direct mapping +3545003,Diastolic dysfunction (finding),y,direct mapping +253529002,Right ventricular outflow tract abnormality (disorder),y,direct mapping +811701000000105,Angina self-management plan review (procedure),y,direct mapping +62335009,Congenital stenosis of inferior vena cava (disorder),y,direct mapping +64715009,Hypertensive heart disease (disorder),y,direct mapping +195021004,Primary dilated cardiomyopathy (disorder),y,direct mapping +91335003,Mural thrombus of heart (disorder),y,direct mapping +309634009,History of heart failure in last year (situation),y,direct mapping +253674003,Preductal hypoplasia of aorta (disorder),y,direct mapping +378121000000101,Aortopulmonary reconstruction with systemic to pulmonary arterial shunt (procedure),y,direct mapping +28931004,Coronary artery rupture (disorder),y,direct mapping +261538006,Open intracoronary repair of coronary artery fistula (procedure),y,direct mapping +40272001,Congenital absence of coronary sinus (disorder),y,direct mapping +448302004,Repair of tetralogy of Fallot using right ventricular outflow conduit (procedure),y,direct mapping +253317005,Inferior vena cava connecting to morphological left atrium (disorder),y,direct mapping +174803001,Revision of transplantation of heart and lung (procedure),y,direct mapping +204299009,Dextrotransposition of aorta (disorder),y,direct mapping +253499008,Accessory tissue on left atrioventricular valve leaflet (disorder),y,direct mapping +253284006,Double inlet to ventricle of indeterminate morphology (disorder),y,direct mapping +253609009,Abnormal number of aortic valve cusps (disorder),y,direct mapping +315025001,Refractory angina (disorder),y,direct mapping +764851000000102,Worsening pulmonary oedema (finding),y,direct mapping +233858000,Familial mitral valve prolapse (disorder),y,direct mapping +204378009,Congenital coronary aneurysm (disorder),y,direct mapping +253447006,Common atrioventricular valve chordae to outlet septum (disorder),y,direct mapping +81990004,Cor biloculare (disorder),y,direct mapping +253576006,Bilateral deficient infundibula (disorder),y,direct mapping +80387009,Roger's disease (disorder),y,direct mapping +253470003,True cleft of right atrioventricular valve leaflet (disorder),y,direct mapping +233838001,Acute posterior myocardial infarction (disorder),y,direct mapping +253584005,Accessory tissue on truncal valve cusp (disorder),y,direct mapping +62067003,Hypoplastic left heart syndrome (disorder),y,direct mapping +253723003,Coronary fistulae from right ventricle (disorder),y,direct mapping +95441000,Pulmonary artery stenosis (disorder),y,direct mapping +253573003,Subpulmonary infundibulum (disorder),y,direct mapping +374231000000104,High risk of heart failure screening invitation (procedure),y,direct mapping +253303001,Solitary aortic trunk with pulmonary atresia (disorder),y,direct mapping +253435000,Dilatation of common atrioventricular valve annulus (disorder),y,direct mapping +253636006,Anomalous origin of left pulmonary artery from ductus arteriosus (disorder),y,direct mapping +429639007,Percutaneous transluminal balloon angioplasty with insertion of stent into coronary artery (procedure),y,direct mapping +15096009,Congenital insufficiency of pulmonary valve (disorder),y,direct mapping +204354004,Congenital tricuspid atresia and stenosis (disorder),y,direct mapping +253479002,Parachute malformation of right atrioventricular valve (disorder),y,direct mapping +42531007,Microinfarct of heart (disorder),y,direct mapping +394724007,Coronary heart disease medication review (procedure),y,direct mapping +275516004,Cardiomegaly - hypertensive (disorder),y,direct mapping +195111005,Decompensated cardiac failure (disorder),y,direct mapping +253277003,Discordant atrioventricular connection (disorder),y,direct mapping +75270000,Congenital diverticulum of left ventricle (disorder),y,direct mapping +7438000,Congenital atresia of aorta (disorder),y,direct mapping +253635005,Abnormal origin of left pulmonary artery (disorder),y,direct mapping +232921000000108,Repair of Fallot-type pulmonary atresia with aortopulmonary collaterals (procedure),y,direct mapping +32477003,Heart-lung transplant with recipient cardiectomy-pneumonectomy (procedure),y,direct mapping +170596004,Angina control - improving (finding),y,direct mapping +253623006,Pulmonary trunk atresia (disorder),y,direct mapping +45227007,Hypertrophic obstructive cardiomyopathy (disorder),y,direct mapping +204391005,Hypoplasia of cardiac vein (disorder),y,direct mapping +253297008,Transposition of aorta (disorder),y,direct mapping +936451000000108,Percutaneous transluminal balloon angioplasty and insertion of drug eluting stent into coronary artery (procedure),y,direct mapping +253451008,Absent common atrioventricular valve papillary muscle (disorder),y,direct mapping +915571000000102,On optimal heart failure therapy (finding),y,direct mapping +308117007,Antianginal therapy (procedure),y,direct mapping +253654005,Right aortic arch and right descending aorta (disorder),y,direct mapping +233844002,Accelerated coronary artery disease in transplanted heart (disorder),y,direct mapping +55510008,Cor triatriatum (disorder),y,direct mapping +95237001,Retroesophageal subclavian artery (disorder),y,direct mapping +233842003,Old posterior myocardial infarction (disorder),y,direct mapping +48520006,Congenital atresia of cardiac vein (disorder),y,direct mapping +85898001,Cardiomyopathy (disorder),y,direct mapping +204457005,Supradiaphragmatic total anomalous pulmonary venous return (disorder),y,direct mapping +303272002,Jatene procedure (procedure),y,direct mapping +873881000000100,Referral to rapid access heart failure clinic (procedure),y,direct mapping +233839009,Old anterior myocardial infarction (disorder),y,direct mapping +194865003,Rupture of cardiac wall without hemopericardium as current complication following acute myocardial infarction (disorder),y,direct mapping +253664001,Vascular ring with right aortic arch (disorder),y,direct mapping +253366007,Interauricular septal defect (disorder),y,direct mapping +253423004,Malaligned atrial septum (disorder),y,direct mapping +253644006,Ascending aorta absent (disorder),y,direct mapping +60787001,Congenital hypoplasia of aortic arch (disorder),y,direct mapping +253460000,Overriding right atrioventricular valve (disorder),y,direct mapping +7305005,Coarctation of aorta (disorder),y,direct mapping +232728008,Percutaneous low speed rotational coronary atherectomy (procedure),y,direct mapping +26201005,Aortic left ventricular tunnel (disorder),y,direct mapping +68092007,Anomalous origin of pulmonary artery (disorder),y,direct mapping +174818000,Revision of correction of tetralogy of Fallot (procedure),y,direct mapping +732230001,Dissection of coronary artery (disorder),y,direct mapping +253580001,Truncal valve dysplasia (disorder),y,direct mapping +287283006,Heart internal mammary artery implant (body structure),y,direct mapping +253596003,Absent pulmonary valve syndrome (disorder),y,direct mapping +253591008,Pulmonary atresia with ventricular septal defect (disorder),y,direct mapping +48121000,Congenital cardiomegaly (disorder),y,direct mapping +213037002,Mechanical complication of coronary bypass (disorder),y,direct mapping +253514004,Dextraposition of aorta in Fallot's tetralogy (disorder),y,direct mapping +253498000,True cleft of left atrioventricular valve leaflet (disorder),y,direct mapping +253611000,Quadricuspid aortic valve (disorder),y,direct mapping +277638005,Sepsis-associated left ventricular failure (disorder),y,direct mapping +719678003,Non-obstructive atherosclerosis of coronary artery (disorder),y,direct mapping +195027000,Mucopolysaccharidosis cardiomyopathy (disorder),y,direct mapping +736966005,Aortocoronary artery bypass of four or more coronary arteries with saphenous vein graft (procedure),y,direct mapping +237227006,Congenital heart disease in pregnancy (disorder),y,direct mapping +35728003,Familial cardiomyopathy (disorder),y,direct mapping +399020009,Congestive cardiomyopathy (disorder),y,direct mapping +54682008,Congenital hypoplasia of pulmonary artery (disorder),y,direct mapping +253275006,Abnormal atrioventricular connection - biventricular (disorder),y,direct mapping +253486005,Left atrioventricular valve dysplasia (disorder),y,direct mapping +253564006,Muscular ventricular septal defect in central trabecular septum (disorder),y,direct mapping +68237008,Partial anomalous pulmonary venous connection (disorder),y,direct mapping +253588008,Pulmonary valve dysplasia (disorder),y,direct mapping +427585005,Biventricular repair of hypoplastic left heart syndrome (procedure),y,direct mapping +253704005,Anomalous origin of left anterior descending from right coronary artery (disorder),y,direct mapping +717491000000102,Excepted from heart failure quality indicators - informed dissent (finding),y,direct mapping +395704004,Left ventricular diastolic dysfunction (disorder),y,direct mapping +253334002,Congenital abnormality of atria and atrial septum (disorder),y,direct mapping +63042009,Congenital atresia of tricuspid valve (disorder),y,direct mapping +204345002,Congenital fusion of pulmonic cusps (disorder),y,direct mapping +275511009,Mural cardiac aneurysm (disorder),y,direct mapping +253540005,Hypoplasia of left ventricular outflow tract and trabecular area (disorder),y,direct mapping +253552003,Perimembranous ventricular septal defect with extension to right ventricular inlet (disorder),y,direct mapping +253646008,Congenital aneurysm of ascending aorta (disorder),y,direct mapping +253356004,Left atrial appendage absent (disorder),y,direct mapping +253537005,Diffuse hypoplasia of left ventricle (disorder),y,direct mapping +204464007,Absence of superior vena cava (disorder),y,direct mapping +24355008,Thromboendarterectomy of coronary artery by open chest approach (procedure),y,direct mapping +253377001,Dilatation of tricuspid annulus (disorder),y,direct mapping +164868007,Anteroseptal infarction on electrocardiogram (finding),y,direct mapping +448794008,Double outlet right ventricle with subpulmonary ventricular septal defect (disorder),y,direct mapping +253301004,Double outlet from ventricle of indeterminate morphology (disorder),y,direct mapping +164870003,Electrocardiographic subendocardial infarct (finding),y,direct mapping +736969003,Aortocoronary artery bypass of two coronary arteries with saphenous vein graft (procedure),y,direct mapping +14886009,Abdominal heart (disorder),y,direct mapping +408546009,Coronary artery bypass graft occlusion (disorder),y,direct mapping +253579004,Truncal valve abnormality (disorder),y,direct mapping +28656008,Congenital insufficiency of aortic valve (disorder),y,direct mapping +31413008,Operative procedure on coronary artery (procedure),y,direct mapping +93384001,Congenital stenosis of aortic arch (disorder),y,direct mapping +253375009,Tricuspid leaflet dysplasia (disorder),y,direct mapping +164865005,Electrocardiographic myocardial infarction (finding),y,direct mapping +13689005,Congenital anomaly of aortic valve (disorder),y,direct mapping +253583004,Truncal valve prolapse (disorder),y,direct mapping +232736004,Open operation for coronary artery fistula (procedure),y,direct mapping +390799004,Coronary heart disease review (procedure),y,direct mapping +194866002,Rupture of chordae tendinae due to and following acute myocardial infarction (disorder),y,direct mapping +253712002,Dual coronary orifice (disorder),y,direct mapping +853591000000103,Referral to Angina Plan self-management programme declined (situation),y,direct mapping +26780008,Coarctation of pulmonary artery (disorder),y,direct mapping +716091000000107,Excepted from coronary heart disease quality indicators - informed dissent (finding),y,direct mapping +717191000000108,Heart failure monitoring second letter (procedure),y,direct mapping +253716004,Aberrant course of left anterior descending coronary artery from right coronary artery crossing right ventricular outflow tract (disorder),y,direct mapping +204343009,Hypoplasia of pulmonary valve (disorder),y,direct mapping +204394002,Congenital anomaly of myocardium (disorder),y,direct mapping +66403007,Vascular ring of aorta (disorder),y,direct mapping +44777001,Creation of conduit between right ventricle and pulmonary artery (procedure),y,direct mapping +66610008,Malignant hypertensive heart AND renal disease (disorder),y,direct mapping +261755008,Coronary inclusion technique (procedure),y,direct mapping +58612006,Acute myocardial infarction of lateral wall (disorder),y,direct mapping +23685000,Rheumatic heart disease (disorder),y,direct mapping +253718003,Circumflex runs posterior to pulmonary trunk (disorder),y,direct mapping +204370002,Stenosis of infundibulum of right ventricle (disorder),y,direct mapping +93059006,Congenital dilatation of pulmonary artery (disorder),y,direct mapping +134401001,Left ventricular systolic dysfunction (disorder),y,direct mapping +14201006,Coronary angioplasty by open chest approach (procedure),y,direct mapping +233827001,Acute Q wave infarction - anterolateral (disorder),y,direct mapping +253268005,Abnormal relationship of right ventricle to left ventricle (disorder),y,direct mapping +253388007,Tricuspid chordae tendinae too long (disorder),y,direct mapping +401253006,Coronary heart disease monitoring verbal invitation (finding),y,direct mapping +367363000,Right ventricular failure (disorder),y,direct mapping +233847009,Cardiac rupture due to and following acute myocardial infarction (disorder),y,direct mapping +253421002,Atrioventricular septal defect with ventricular component under free floating superior bridging leaflet and chords to papillary muscle at right ventricular free wall (disorder),y,direct mapping +233819005,Stable angina (disorder),y,direct mapping +715981000000101,Excepted from myocardial infarction quality indicators - patient unsuitable (finding),y,direct mapping +253468007,Ebstein's anomaly of right atrioventricular valve (disorder),y,direct mapping +302943003,Abnormal number of pulmonary valve cusps (disorder),y,direct mapping +174817005,Correction of tetralogy of Fallot using right ventricular outflow patch (procedure),y,direct mapping +422293003,New York Heart Association Classification - Class IV (finding),y,direct mapping +53741008,Coronary arteriosclerosis (disorder),y,direct mapping +70211005,Acute myocardial infarction of anterolateral wall (disorder),y,direct mapping +204433005,Aplasia of aorta (disorder),y,direct mapping +175038009,Revision of bypass for two coronary arteries (procedure),y,direct mapping +253348002,Right atrial endocardial fibroelastosis (disorder),y,direct mapping +253582009,Truncal valve regurgitation (disorder),y,direct mapping +253333008,Abnormal connection of hepatic vein to atrium (disorder),y,direct mapping +414089002,Emergency percutaneous coronary intervention (procedure),y,direct mapping +232727003,Percutaneous directional coronary atherectomy (procedure),y,direct mapping +704207005,Frequency of angina (observable entity),y,direct mapping +426611007,Congestive heart failure due to valvular disease (disorder),y,direct mapping +194828000,Angina (disorder),y,direct mapping +195029002,Cardiomyopathy associated with another disorder (disorder),y,direct mapping +3546002,Aortocoronary artery bypass graft with saphenous vein graft (procedure),y,direct mapping +54160000,Congenital aneurysm of sinus of Valsalva (disorder),y,direct mapping +253536001,Left ventricular hypoplasia (disorder),y,direct mapping +275252001,Left internal mammary artery sequential anastomosis (procedure),y,direct mapping +253337009,Isomerism of left atrial appendage (disorder),y,direct mapping +253598002,Unicuspid pulmonary valve (disorder),y,direct mapping +204397009,Cor triloculare (disorder),y,direct mapping +161505003,History of heart failure (situation),y,direct mapping +92960007,Congenital absence of aortic valve (disorder),y,direct mapping +195130005,Post cardiac operation functional disturbance (disorder),y,direct mapping +415070008,Percutaneous coronary intervention (procedure),y,direct mapping +253394004,Hypoplastic tricuspid papillary muscle (disorder),y,direct mapping +204463001,Absence of inferior vena cava (disorder),y,direct mapping +175040004,Revision of bypass for four or more coronary arteries (procedure),y,direct mapping +413838009,Chronic ischemic heart disease (disorder),y,direct mapping +67682002,Coronary artery atheroma (disorder),y,direct mapping +31019002,Implantation of artificial heart (procedure),y,direct mapping +39905002,Scimitar syndrome (disorder),y,direct mapping +10273003,Acute infarction of papillary muscle (disorder),y,direct mapping +62695002,Acute anteroseptal myocardial infarction (disorder),y,direct mapping +7484005,Double outlet right ventricle (disorder),y,direct mapping +251038002,Aortic root congenital abnormality (disorder),y,direct mapping +253571001,Giant ventricular septal defect (disorder),y,direct mapping +204346001,Congenital fusion of pulmonary valve segment (disorder),y,direct mapping +253594000,Muscular pulmonary atresia (disorder),y,direct mapping +195114002,Acute left ventricular failure (disorder),y,direct mapping +276517000,Transient myocardial ischemia of newborn (disorder),y,direct mapping +281092007,Stunned myocardium (disorder),y,direct mapping +414545008,Ischemic heart disease (disorder),y,direct mapping +253533009,Right ventricular outflow tract atresia (disorder),y,direct mapping +233845001,Cardiac syndrome X (finding),y,direct mapping +175048006,Single anastomosis of mammary artery to left anterior descending coronary artery (procedure),y,direct mapping +224111000000108,Total cavopulmonary connection with extracardiac inferior caval vein to pulmonary artery conduit (procedure),y,direct mapping +262941008,Transection of coronary artery (disorder),y,direct mapping +194858006,Subsequent myocardial infarction of inferior wall (disorder),y,direct mapping +174911007,Revascularization of wall of heart (procedure),y,direct mapping +360371003,Acute cardiac pulmonary edema (disorder),y,direct mapping +63739005,Coronary occlusion (disorder),y,direct mapping +11101003,Percutaneous transluminal coronary angioplasty (procedure),y,direct mapping +91634006,Fused commissures of mitral valve (disorder),y,direct mapping +253446002,Common atrioventricular valve chordae too long (disorder),y,direct mapping +253608001,Accessory tissue on aortic valve cusp (disorder),y,direct mapping +277994007,Percutaneous removal of foreign body from coronary artery (procedure),y,direct mapping +204451006,Anomalies of great veins (disorder),y,direct mapping +437746009,Percutaneous transluminal septal myocardial ablation (procedure),y,direct mapping +253463003,Straddling right atrioventricular valve (disorder),y,direct mapping +253494003,Absent left atrioventricular valve leaflets (disorder),y,direct mapping +204368006,Subaortic stenosis (disorder),y,direct mapping +12770006,Cyanotic congenital heart disease (disorder),y,direct mapping +1083131000000100,Coronary heart disease monitoring invitation email (procedure),y,direct mapping +90453003,Chronic rheumatic mediastinopericarditis (disorder),y,direct mapping +248461000000107,Coronary heart disease monitoring telephone invite (regime/therapy),y,direct mapping +387732009,Becker muscular dystrophy (disorder),y,direct mapping +233878008,Familial restrictive cardiomyopathy (disorder),y,direct mapping +253525008,Congenital right ventricular diverticulum (disorder),y,direct mapping +204427001,Persistent aortic arch convolutions (disorder),y,direct mapping +70320004,Congenital anomaly of heart valve (disorder),y,direct mapping +253439006,True cleft of common atrioventricular valve leaflet (disorder),y,direct mapping +233817007,Triple vessel disease of the heart (disorder),y,direct mapping +170593007,Angina control (finding),y,direct mapping +213151004,Heart transplant failure and rejection (disorder),y,direct mapping +253354001,Supramitral left atrial ring (disorder),y,direct mapping +253298003,Double outlet right ventricle with subaortic ventricular septal defect (disorder),y,direct mapping +253457007,Right atrioventricular valve dysplasia (disorder),y,direct mapping +413844008,Chronic myocardial ischemia (disorder),y,direct mapping +253467002,Double orifice of right atrioventricular valve (disorder),y,direct mapping +253369000,Sinus venosus defect with overriding superior vena cava (disorder),y,direct mapping +253287004,Left sided atrium connecting to right ventricle (disorder),y,direct mapping +204342004,Congenital atresia of the pulmonary valve (disorder),y,direct mapping +253655006,Right aortic arch and left descending aorta (disorder),y,direct mapping +233833005,Acute Q wave infarction - lateral (disorder),y,direct mapping +234132006,Congenital abnormality of great veins and coronary sinus (disorder),y,direct mapping +26146002,Complete transposition of great vessels (disorder),y,direct mapping +195030007,Cardiomyopathy in Friedreich's ataxia (disorder),y,direct mapping +390884006,Heart failure follow-up (finding),y,direct mapping +83105008,Malignant hypertensive heart disease with congestive heart failure (disorder),y,direct mapping +253285007,Absent right sided atrioventricular connection (disorder),y,direct mapping +253492004,Straddling left atrioventricular valve (disorder),y,direct mapping +253509003,Fused left atrioventricular valve papillary muscles (disorder),y,direct mapping +253293007,Right sided atrium connecting to both ventricles (disorder),y,direct mapping +63934006,Overriding aorta (disorder),y,direct mapping +420300004,New York Heart Association Classification - Class I (finding),y,direct mapping +23687008,Coronary artery spasm (disorder),y,direct mapping +45503006,Common ventricle (disorder),y,direct mapping +253587003,Commissural fusion of pulmonary valve (disorder),y,direct mapping +195032004,Dystrophic cardiomyopathy (disorder),y,direct mapping +698378009,Coronary artery bypass graft operation planned (situation),y,direct mapping +71892000,Cardiac asthma (disorder),y,direct mapping +253282005,Double inlet right ventricle (disorder),y,direct mapping +253649001,Aortic tunnel (disorder),y,direct mapping +416683003,Emergency hospital admission for heart failure (procedure),y,direct mapping +250942008,Right ventricular muscular infundibular stenosis (disorder),y,direct mapping +253521004,Hypoplasia of right ventricular outflow tract and trabecular area (disorder),y,direct mapping +253656007,Aortic arch centrally descending (disorder),y,direct mapping +314206003,Refractory heart failure (disorder),y,direct mapping +446221000,Heart failure with normal ejection fraction (disorder),y,direct mapping +223301000000106,Relief of right ventricular outflow tract obstruction (procedure),y,direct mapping +204467000,Pulmonary vein atresia (disorder),y,direct mapping +250941001,Right ventricular fibromuscular infundibular stenosis (disorder),y,direct mapping +270510008,Anomalous coronary artery communication (disorder),y,direct mapping +195031006,Cardiomyopathy in myotonic dystrophy (disorder),y,direct mapping +175039001,Revision of bypass for three coronary arteries (procedure),y,direct mapping +253471004,Accessory tissue on right atrioventricular valve leaflet (disorder),y,direct mapping +373093003,Coronary artery fistula (disorder),y,direct mapping +72972005,Dilated cardiomyopathy caused by drug (disorder),y,direct mapping +704097008,Referral to heart failure exercise program declined (situation),y,direct mapping +253404006,Anterior leaflet of mitral valve attached to septum (disorder),y,direct mapping +204319006,Lutembacher's syndrome (disorder),y,direct mapping +87343002,Prinzmetal angina (disorder),y,direct mapping +253279000,Absent atrioventricular connection with straddling valve (disorder),y,direct mapping +253364005,Foramen ovale valvar aneurysm (disorder),y,direct mapping +707828002,Percutaneous transluminal cutting balloon angioplasty of coronary artery (procedure),y,direct mapping +253485009,Imperforate left atrioventricular valve (disorder),y,direct mapping +384677005,Reimplantation of coronary artery (procedure),y,direct mapping +253622001,Pulmonary trunk hypoplasia (disorder),y,direct mapping +62377009,Postpartum cardiomyopathy (disorder),y,direct mapping +174831005,Correction of total anomalous pulmonary venous connection to supracardiac vessel (procedure),y,direct mapping +253342001,Prolapse of Eustachian valve (disorder),y,direct mapping +253403000,Ebstein-like downward displacement of mitral valve (disorder),y,direct mapping +253310007,Anomalous insertion of right superior vena cava to left atrium (disorder),y,direct mapping +297160003,Left ventricular aneurysm (disorder),y,direct mapping +164867002,Electrocardiographic old myocardial infarction (finding),y,direct mapping +25106000,Impending infarction (disorder),y,direct mapping +717111000000104,Excepted from coronary heart disease quality indicators - patient unsuitable (finding),y,direct mapping +253653004,Left aortic arch and right descending aorta (disorder),y,direct mapping +253276007,Cor triloculare biventriculare (disorder),y,direct mapping +253585006,Pulmonary valve cusp hypoplasia (disorder),y,direct mapping +75398000,Anomalous origin of coronary artery (disorder),y,direct mapping +13867009,Preductal coarctation of aorta (disorder),y,direct mapping +428411007,Aortopulmonary reconstruction with systemic-to-pulmonary arterial shunt (procedure),y,direct mapping +253681005,Interrupted aortic arch distal to left subclavian artery (disorder),y,direct mapping +52035003,Acute anteroapical myocardial infarction (disorder),y,direct mapping +36422005,Transposition of pulmonary veins (disorder),y,direct mapping +253392000,Absent tricuspid papillary muscle (disorder),y,direct mapping +253673009,Preductal interruption of aorta (disorder),y,direct mapping +253450009,Parachute malformation of common atrioventricular valve (disorder),y,direct mapping +194862000,Hemopericardium due to and following acute myocardial infarction (disorder),y,direct mapping +9909003,Fatty degeneration of heart (disorder),y,direct mapping +224181000000101,Left ventricle to aorta tunnel with right ventricle to pulmonary artery valved conduit (procedure),y,direct mapping +253680006,Postductal hypoplasia of aorta (disorder),y,direct mapping +253349005,Right atrial hypoplasia (disorder),y,direct mapping +253710005,Coronary orifice abnormally high (disorder),y,direct mapping +253429000,Atresia of common atrioventricular valve (disorder),y,direct mapping +83799000,Corrected transposition of great vessels (disorder),y,direct mapping +397194000,Percutaneous rotational coronary endarterectomy (procedure),y,direct mapping +65547006,Acute myocardial infarction of inferolateral wall (disorder),y,direct mapping +59021001,Angina decubitus (disorder),y,direct mapping +35928006,Nocturnal angina (disorder),y,direct mapping +253330006,Patent ductus venosus (disorder),y,direct mapping +253399009,Straddling mitral valve (disorder),y,direct mapping +253416000,Atrioventricular septal defect: atrial and ventricular components (disorder),y,direct mapping +275216000,Right internal mammary artery single anastomosis (procedure),y,direct mapping +253442000,Triple orifice of left ventricular component of common atrioventricular valve (disorder),y,direct mapping +4557003,Preinfarction syndrome (disorder),y,direct mapping +233930009,Intracardiac thrombosis in low output state (disorder),y,direct mapping +253396002,Mitral leaflet dysplasia (disorder),y,direct mapping +29899005,Coronary artery embolism (disorder),y,direct mapping +308118002,Cardiac failure therapy (procedure),y,direct mapping +253638007,Anomalous origin of left pulmonary artery from right pulmonary artery (disorder),y,direct mapping +202231000000106,Heart failure review completed (situation),y,direct mapping +175021005,Allograft bypass of coronary artery (procedure),y,direct mapping +253513005,Tetralogy of Fallot with pulmonary atresia (disorder),y,direct mapping +253505009,Arcade abnormality of left atrioventricular valve chordae (disorder),y,direct mapping +253551005,Restrictive ventricular septal defect (disorder),y,direct mapping +704096004,Referral to heart failure exercise program not indicated (situation),y,direct mapping +11614003,Congenital stenosis of pulmonary veins (disorder),y,direct mapping +233970002,Coronary artery stenosis (disorder),y,direct mapping +253327004,Congenital coronary sinus stenosis (disorder),y,direct mapping +36315003,Malignant hypertensive heart disease without congestive heart failure (disorder),y,direct mapping +10818008,Congenital malposition of heart (disorder),y,direct mapping +277534001,Percutaneous embolization of coronary artery fistula (procedure),y,direct mapping +939881000000105,Heart failure rehabilitation programme not available (situation),y,direct mapping +66189004,Postmyocardial infarction syndrome (disorder),y,direct mapping +253682003,Interrupted aortic arch between left subclavian and left common carotid artery (disorder),y,direct mapping +390885007,Heart failure annual review (regime/therapy),y,direct mapping +276516009,Myocardial ischemia of newborn (disorder),y,direct mapping +72242008,Postductal coarctation of aorta (disorder),y,direct mapping +253440008,Accessory tissue on common atrioventricular valve leaflet (disorder),y,direct mapping +425654008,Repair of univentricular heart (procedure),y,direct mapping +407597004,Echocardiogram shows left ventricular diastolic dysfunction (finding),y,direct mapping +699245006,Emergency hospital admission for ischemic heart disease (procedure),y,direct mapping +253631001,Peripheral pulmonary artery stenosis (disorder),y,direct mapping +253323000,Coronary sinus abnormality (disorder),y,direct mapping +448619007,Anterior deviation of infundibular septum of Fallot type (disorder),y,descendant of concept mapped from leaf +236006000,Metabolic ascites (disorder),y,descendant of concept mapped from leaf +718556007,Cranio-cerebello-cardiac dysplasia syndrome (disorder),y,descendant of concept mapped from leaf +285991000119100,Acute ST segment elevation myocardial infarction involving left main coronary artery (disorder),y,descendant of concept mapped from leaf +449536002,Double aortic arch with right arch dominant and atresia of left arch and left ligament to diverticulum (disorder),y,descendant of concept mapped from leaf +204981000119101,Cardiomyopathy due to viral infection (disorder),y,descendant of concept mapped from leaf +448646002,Aortic arch hypoplasia distal to subclavian artery (disorder),y,descendant of concept mapped from leaf +720605009,Cardiac anomaly and heterotaxy syndrome (disorder),y,descendant of concept mapped from leaf +253538000,Hypoplasia of left ventricular inflow tract (disorder),y,descendant of concept mapped from leaf +715865008,Familial isolated arrhythmogenic right ventricular dysplasia (disorder),y,descendant of concept mapped from leaf +16440002,Rheumatic disease of mitral AND aortic valves (disorder),y,descendant of concept mapped from leaf +429347004,Rheumatic aortic valve sclerosis (disorder),y,descendant of concept mapped from leaf +461345005,Coronary artery orifice abnormally low (disorder),y,descendant of concept mapped from leaf +1092801000119102,Hepatic ascites co-occurrent with chronic active hepatitis due to toxic liver disease (disorder),y,descendant of concept mapped from leaf +447498008,Obstructed pulmonary venous connection due to extrinsic compression between right pulmonary artery and trachea (disorder),y,descendant of concept mapped from leaf +448919005,Atrioventricular septal defect with ventricular component under superior bridging leaflet without chordal attachment to ventricular septal crest (disorder),y,descendant of concept mapped from leaf +472318007,Hypertrophic mitochondrial cardiomyopathy associated with cataracts and lactic acidosis (disorder),y,descendant of concept mapped from leaf +766883006,Familial dilated cardiomyopathy with conduction defect due to lamin A/C mutation (disorder),y,descendant of concept mapped from leaf +449111002,Double orifice of right atrioventricular valve in double inlet ventricle (disorder),y,descendant of concept mapped from leaf +233711002,Oxygen-induced pulmonary edema (disorder),y,descendant of concept mapped from leaf +1641000119107,Coronary arteriosclerosis in native artery (disorder),y,descendant of concept mapped from leaf +405598005,Aortocoronary artery bypass graft with two vein grafts (procedure),y,descendant of concept mapped from leaf +725145002,"Atrial septal defect, atrioventricular conduction defect syndrome (disorder)",y,descendant of concept mapped from leaf +460307002,Systemic to pulmonary collateral artery from right carotid artery (disorder),y,descendant of concept mapped from leaf +1089471000000109,Acute transmural myocardial infarction (disorder),y,descendant of concept mapped from leaf +93050005,Congenital dilatation of aortic arch (disorder),y,descendant of concept mapped from leaf +25544003,Low output heart failure (disorder),y,descendant of concept mapped from leaf +29375001,Abnormal number of cusps (disorder),y,descendant of concept mapped from leaf +719824001,Vici syndrome (disorder),y,descendant of concept mapped from leaf +448633007,Right ventricular outflow tract obstruction due to atrioventricular valve (disorder),y,descendant of concept mapped from leaf +12367281000119109,Mural thrombus of right ventricle (disorder),y,descendant of concept mapped from leaf +10519008,Acute pulmonary edema caused by fumes AND/OR vapors (disorder),y,descendant of concept mapped from leaf +448968005,Persisting fifth aortic arch with atresia of fourth arch (disorder),y,descendant of concept mapped from leaf +472100003,Ischemic dilated cardiomyopathy due to coronary artery disease (disorder),y,descendant of concept mapped from leaf +449436000,Divided left atrium with some pulmonary veins to proximal chamber draining to left atrium (disorder),y,descendant of concept mapped from leaf +449455000,Abnormal attachment of tricuspid chordae tendinae (disorder),y,descendant of concept mapped from leaf +460387004,Systemic to pulmonary collateral artery from left brachiocephalic artery (disorder),y,descendant of concept mapped from leaf +460590006,Vascular ring with right aortic arch and left ligamentum arteriosum with anomalous retroesophageal left subclavian artery (disorder),y,descendant of concept mapped from leaf +24088005,Coronary artery atherectomy (procedure),y,descendant of concept mapped from leaf +92969008,Congenital absence of mitral valve (disorder),y,descendant of concept mapped from leaf +472320005,Maternally inherited mitochondrial cardiomyopathy and myopathy (disorder),y,descendant of concept mapped from leaf +443391000,Repair of total anomalous pulmonary venous connection by insertion of interatrial baffle with reconnection of superior caval vein to right atrial appendage (procedure),y,descendant of concept mapped from leaf +11018701000119109,Coronary arteriosclerosis after percutaneous coronary angioplasty (disorder),y,descendant of concept mapped from leaf +459182005,Aneurysm of patch of left ventricular outflow tract (disorder),y,descendant of concept mapped from leaf +726083008,Congenital sacral meningocele with conotruncal heart defect syndrome (disorder),y,descendant of concept mapped from leaf +196151000,Pulmonary insufficiency following shock (disorder),y,descendant of concept mapped from leaf +447669002,Hypoplasia of left heart without intrinsic valve stenosis and without atresia (disorder),y,descendant of concept mapped from leaf +96731000119100,Hypertensive heart AND chronic kidney disease stage 3 (disorder),y,descendant of concept mapped from leaf +89461002,Primary cardiomyopathy (disorder),y,descendant of concept mapped from leaf +47800001,Repair of coronary arteriocardiac chamber fistula (procedure),y,descendant of concept mapped from leaf +723304001,"Microcephaly, seizure, intellectual disability, heart disease syndrome (disorder)",y,descendant of concept mapped from leaf +448923002,Hypoplasia of infundibular septum (disorder),y,descendant of concept mapped from leaf +764697003,Verloove Vanhorick Brubakk syndrome (disorder),y,descendant of concept mapped from leaf +447860000,Partial anomalous pulmonary venous connection of part of right lung (disorder),y,descendant of concept mapped from leaf +763279007,"Facial dysmorphism, conductive hearing loss, heart defect syndrome (disorder)",y,descendant of concept mapped from leaf +233705000,Neurogenic pulmonary edema (disorder),y,descendant of concept mapped from leaf +429809004,Fluoroscopic percutaneous transluminal angioplasty of coronary artery (procedure),y,descendant of concept mapped from leaf +759561000000108,Atrioventricular septal defect with ventricular imbalance (disorder),y,descendant of concept mapped from leaf +447913009,Completely unroofed coronary sinus defect in left atrium (disorder),y,descendant of concept mapped from leaf +418304008,Diastolic heart failure (disorder),y,descendant of concept mapped from leaf +471841009,Inflammatory cardiomyopathy (disorder),y,descendant of concept mapped from leaf +449014008,Hepatic vein to left sided atrium (disorder),y,descendant of concept mapped from leaf +449178002,Doubly committed ventricular septal defect in double outlet ventriculoarterial connection (disorder),y,descendant of concept mapped from leaf +460517008,Anomalous origin of coronary arteries from both aortic sinuses of bicuspid valve (disorder),y,descendant of concept mapped from leaf +712866001,Resting ischemia co-occurrent and due to ischemic heart disease (disorder),y,descendant of concept mapped from leaf +449383004,Congenital abnormality of atrioventricular valve papillary muscle in atrioventricular septal defect (disorder),y,descendant of concept mapped from leaf +67782005,Acute respiratory distress syndrome (disorder),y,descendant of concept mapped from leaf +720567008,Bosley Salih Alorainy syndrome (disorder),y,descendant of concept mapped from leaf +448824007,Left ventricular myocardial sinusoids (disorder),y,descendant of concept mapped from leaf +72252007,Congenital hypoplasia of cardiac vein (disorder),y,descendant of concept mapped from leaf +447845003,Right ventricle posterior to left ventricle (disorder),y,descendant of concept mapped from leaf +15629741000119102,Systolic heart failure stage C due to ischemic cardiomyopathy (disorder),y,descendant of concept mapped from leaf +51789008,Congenital malposition of cardiac apex (disorder),y,descendant of concept mapped from leaf +609155001,Percutaneous transluminal coil embolization of fistula of coronary artery using fluoroscopic guidance (procedure),y,descendant of concept mapped from leaf +447934002,Right ventricular myocardial noncompaction cardiomyopathy (disorder),y,descendant of concept mapped from leaf +447703009,Double aortic arch with left arch dominant and coarctation of right arch (disorder),y,descendant of concept mapped from leaf +448843007,Aortico-left ventricular tunnel with aneurysm of intracardiac septal wall and aneurysm of extracardiac aortic wall (disorder),y,descendant of concept mapped from leaf +49699002,Rheumatic disease of tricuspid valve (disorder),y,descendant of concept mapped from leaf +60856006,Cardiac insufficiency following cardiac surgery (disorder),y,descendant of concept mapped from leaf +448819009,Right-left orientation of bicuspid aortic valve (disorder),y,descendant of concept mapped from leaf +447824005,Congenital abnormality of left atrium (disorder),y,descendant of concept mapped from leaf +448645003,Aortic arch hypoplasia between subclavian and common carotid arteries (disorder),y,descendant of concept mapped from leaf +448095003,Aortic left ventricular tunnel with right coronary artery from tunnel (disorder),y,descendant of concept mapped from leaf +30277009,Acute myocardial infarction with rupture of ventricle (disorder),y,descendant of concept mapped from leaf +264571006,Septoparietal trabeculations (disorder),y,descendant of concept mapped from leaf +83014000,MacCallum's patch (disorder),y,descendant of concept mapped from leaf +787001,Rheumatic mitral stenosis with regurgitation (disorder),y,descendant of concept mapped from leaf +445285002,Aortic sinus of Valsalva aneurysm from left coronary sinus (disorder),y,descendant of concept mapped from leaf +472315005,Mitochondrial cardiomyopathy (disorder),y,descendant of concept mapped from leaf +447939007,Partial anomalous pulmonary venous connection of entire left lung (disorder),y,descendant of concept mapped from leaf +85503007,Grafting of omentum to myocardium (procedure),y,descendant of concept mapped from leaf +707476006,Stenosis of right pulmonary artery as complication of procedure (disorder),y,descendant of concept mapped from leaf +448947009,Congenital abnormality of left atrioventricular valve in double inlet ventricle (disorder),y,descendant of concept mapped from leaf +12023003,Rheumatic disease of aortic valve (disorder),y,descendant of concept mapped from leaf +447928009,Double aortic arch with balanced arches (disorder),y,descendant of concept mapped from leaf +253308005,Absent right superior vena cava (disorder),y,descendant of concept mapped from leaf +371806006,Progressive angina (disorder),y,descendant of concept mapped from leaf +703276005,Heart failure with reduced ejection fraction due to heart valve disease (disorder),y,descendant of concept mapped from leaf +447668005,Discontinuous pulmonary arteries (disorder),y,descendant of concept mapped from leaf +285251000119101,Dextrotransposition of the great arteries (disorder),y,descendant of concept mapped from leaf +111319002,"Truncus arteriosus, Edwards' type IV (disorder)",y,descendant of concept mapped from leaf +449040002,Hypoplasia of right atrioventricular valve annulus in double inlet ventricle (disorder),y,descendant of concept mapped from leaf +449560003,Multiple stenoses of right pulmonary artery (disorder),y,descendant of concept mapped from leaf +471875005,Ventricular myocardial noncompaction cardiomyopathy (disorder),y,descendant of concept mapped from leaf +698296002,Acute exacerbation of chronic congestive heart failure (disorder),y,descendant of concept mapped from leaf +703251009,Acute myocardial infarction of inferior wall involving right ventricle (disorder),y,descendant of concept mapped from leaf +449385006,Confluent muscular ventricular septal defect (disorder),y,descendant of concept mapped from leaf +728461000000101,Non-fenestrated atrial septal defect within oval fossa (disorder),y,descendant of concept mapped from leaf +449031001,Congenital abnormality of right atrioventricular valve leaflet in double inlet ventricle (disorder),y,descendant of concept mapped from leaf +429245005,Recurrent coronary arteriosclerosis after percutaneous transluminal coronary angioplasty (disorder),y,descendant of concept mapped from leaf +15960661000119107,Unstable angina co-occurrent and due to arteriosclerosis of coronary artery bypass graft (disorder),y,descendant of concept mapped from leaf +460592003,Vascular ring with right aortic arch and left ductus arteriosus from retroesophageal diverticulum of aorta and anomalous left subclavian artery (disorder),y,descendant of concept mapped from leaf +448099009,Aneurysm of aortic sinus of Valsalva with protrusion into right atrium (disorder),y,descendant of concept mapped from leaf +417996009,Systolic heart failure (disorder),y,descendant of concept mapped from leaf +67441000119101,Congestive heart failure stage C (disorder),y,descendant of concept mapped from leaf +449512001,Imperforate right ventriculoarterial valve (disorder),y,descendant of concept mapped from leaf +78196008,Double mitral valve (disorder),y,descendant of concept mapped from leaf +43910005,Congenital hypoplasia of aorta (disorder),y,descendant of concept mapped from leaf +448073002,Congenital abnormality of tricuspid papillary muscle (disorder),y,descendant of concept mapped from leaf +448066007,Divided left atrium with nonrestrictive outlet of proximal chamber to left atrium (disorder),y,descendant of concept mapped from leaf +472795006,Acquired subaortic stenosis due to restrictive ventricular septal defect associated with functionally univentricular heart (disorder),y,descendant of concept mapped from leaf +413995009,Dilated cardiomyopathy due to taurine deficiency (disorder),y,descendant of concept mapped from leaf +17073005,Aortocoronary artery bypass graft with vein graft (procedure),y,descendant of concept mapped from leaf +698740005,Percutaneous transluminal atherectomy of coronary artery by rotary cutter using fluoroscopic guidance (procedure),y,descendant of concept mapped from leaf +759881000000102,Two chambered right ventricle with ventricular septal defect below obstruction (disorder),y,descendant of concept mapped from leaf +89222008,Pericarditis co-occurrent with atrial septal defect (disorder),y,descendant of concept mapped from leaf +445334007,Atrioventricular septal defect with additional muscular ventricular septal defect (disorder),y,descendant of concept mapped from leaf +363125002,Fetal ascites (disorder),y,descendant of concept mapped from leaf +471276003,Single left coronary artery supplying all of heart with usual distribution of right coronary artery derived from distal left coronary artery (disorder),y,descendant of concept mapped from leaf +418044006,Myocardial infarction in recovery phase (disorder),y,descendant of concept mapped from leaf +44630002,Dilated cardiomyopathy secondary to fungal myocarditis (disorder),y,descendant of concept mapped from leaf +449123008,Eccentric opening of tricuspid aortic valve (disorder),y,descendant of concept mapped from leaf +460596000,Systemic to pulmonary collateral artery connecting with isolated intraparenchymal pulmonary arteries (disorder),y,descendant of concept mapped from leaf +15964981000119104,Congenital anomaly of cardiac chamber (disorder),y,descendant of concept mapped from leaf +447998001,Single ventricular outlet above right ventricle (disorder),y,descendant of concept mapped from leaf +443254009,Acute systolic heart failure (disorder),y,descendant of concept mapped from leaf +51201009,Correction of transposition of great vessels (procedure),y,descendant of concept mapped from leaf +2024009,Dilated cardiomyopathy secondary to metazoal myocarditis (disorder),y,descendant of concept mapped from leaf +88445007,Anomalous muscle bands of right ventricle (disorder),y,descendant of concept mapped from leaf +91338001,"Infusion of intra-arterial thrombolytic agent with percutaneous transluminal coronary angioplasty, single vessel (procedure)",y,descendant of concept mapped from leaf +447988007,Common arterial trunk with pulmonary arteries arising from trunk and unobstructed aortic arch (disorder),y,descendant of concept mapped from leaf +448100001,Aneurysm of aortic sinus of Valsalva with protrusion into right ventricle (disorder),y,descendant of concept mapped from leaf +461107002,Single coronary artery dividing into right coronary artery and left coronary artery (disorder),y,descendant of concept mapped from leaf +399046008,L - transposition of the great vessels (disorder),y,descendant of concept mapped from leaf +89687005,Postimmersion-submersion syndrome (disorder),y,descendant of concept mapped from leaf +449316002,Congenital abnormality of right atrioventricular valve in double inlet ventricle (disorder),y,descendant of concept mapped from leaf +39202005,"Coronary artery bypass with autogenous graft, four grafts (procedure)",y,descendant of concept mapped from leaf +79754008,Restrictive cardiomyopathy secondary to amyloidosis (disorder),y,descendant of concept mapped from leaf +699297004,Blepharophimosis-intellectual disability syndrome Maat-Kievit-Brunner type (disorder),y,descendant of concept mapped from leaf +30884007,Restrictive cardiomyopathy secondary to familial storage disease (disorder),y,descendant of concept mapped from leaf +762253006,Common arterial trunk with pulmonary dominance co-occurrent with interrupted aortic arch (disorder),y,descendant of concept mapped from leaf +472326004,Fetal hypertrophic cardiomyopathy associated with renal disease (disorder),y,descendant of concept mapped from leaf +36133000,Abnormal position of cardiac valve (disorder),y,descendant of concept mapped from leaf +85971001,Rheumatic pulmonary valve stenosis with insufficiency (disorder),y,descendant of concept mapped from leaf +759761000000102,Left ventricular outflow tract obstruction due to septal hypertrophy (disorder),y,descendant of concept mapped from leaf +460593008,Vascular ring with right aortic arch and left ductus arteriosus from anomalous retroesophageal brachiocephalic artery (disorder),y,descendant of concept mapped from leaf +59063002,Acute myocardial infarction of apical-lateral wall (disorder),y,descendant of concept mapped from leaf +89323001,"Angina, class IV (disorder)",y,descendant of concept mapped from leaf +461359003,Common coronary artery orifice (disorder),y,descendant of concept mapped from leaf +443344007,Acute on chronic diastolic heart failure (disorder),y,descendant of concept mapped from leaf +460913001,Systemic to coronary collateral artery (disorder),y,descendant of concept mapped from leaf +339909005,"Correction of total anomalous pulmonary venous connection, one-stage (procedure)",y,descendant of concept mapped from leaf +450311005,Major systemic to pulmonary collateral artery supplying unknown zone of distribution (disorder),y,descendant of concept mapped from leaf +461438006,Double barrel dual coronary artery orifices within aortic sinus (disorder),y,descendant of concept mapped from leaf +448007000,Atrioventricular septal defect associated with tetralogy of Fallot (disorder),y,descendant of concept mapped from leaf +448028009,Congenital left ventricular submitral valve aneurysm (disorder),y,descendant of concept mapped from leaf +4313003,Acardiacus anceps (disorder),y,descendant of concept mapped from leaf +449315003,Congenital abnormality of right atrioventricular valve chordae tendinae in double inlet ventricle (disorder),y,descendant of concept mapped from leaf +123660008,Dextrorotation of heart (disorder),y,descendant of concept mapped from leaf +448747000,Common arterial trunk with pulmonary origin from truncal valve sinus (disorder),y,descendant of concept mapped from leaf +449351005,Residual interatrial communication (disorder),y,descendant of concept mapped from leaf +89456004,Chronic rheumatic valvulitis (disorder),y,descendant of concept mapped from leaf +763834000,Oro-facial digital syndrome type 12 (disorder),y,descendant of concept mapped from leaf +448471006,Congenital abnormality of ascending aorta (disorder),y,descendant of concept mapped from leaf +448497000,Congenital deformity of mitral valve annulus (disorder),y,descendant of concept mapped from leaf +448083003,Right ventricular outflow tract obstruction due to prolapsed arterial valve (disorder),y,descendant of concept mapped from leaf +92944008,Congenital abnormal shape of tricuspid valve (disorder),y,descendant of concept mapped from leaf +15712841000119100,Acute ST segment elevation myocardial infarction of posterolateral wall (disorder),y,descendant of concept mapped from leaf +15960981000119105,Mural thrombus of left ventricle following acute myocardial infarction (disorder),y,descendant of concept mapped from leaf +360473004,Congenital muscular subaortic stenosis (disorder),y,descendant of concept mapped from leaf +445284003,Aortic sinus of Valsalva aneurysm from noncoronary sinus (disorder),y,descendant of concept mapped from leaf +726581000000107,Absent left sided atrioventricular connection with straddling valve (disorder),y,descendant of concept mapped from leaf +8501000119104,Hypertensive heart and chronic kidney disease (disorder),y,descendant of concept mapped from leaf +447941008,Residual ventricular septal defect (disorder),y,descendant of concept mapped from leaf +449538001,Atrioventricular septal defect with atrioventricular valve regurgitation through right anterosuperior superior bridging leaflet commissure (disorder),y,descendant of concept mapped from leaf +449467003,Diffuse stenosis of right pulmonary artery (disorder),y,descendant of concept mapped from leaf +33644002,Postvalvulotomy syndrome (disorder),y,descendant of concept mapped from leaf +448074008,Ebstein's anomaly with functional tricuspid stenosis (disorder),y,descendant of concept mapped from leaf +446916007,Functionally univentricular heart (disorder),y,descendant of concept mapped from leaf +445330003,Right atrioventricular valve leaflets absent in double inlet ventricle (unguarded orifice) (disorder),y,descendant of concept mapped from leaf +703164000,Acute ST segment elevation myocardial infarction of anterior wall (disorder),y,descendant of concept mapped from leaf +95236005,Retroesophageal pulmonary artery (disorder),y,descendant of concept mapped from leaf +699298009,"Blepharophimosis-mental retardation syndrome, Say-Barber-Biesecker-Young-Simpson type (disorder)",y,descendant of concept mapped from leaf +445176007,Congenital dilation of ascending aorta (disorder),y,descendant of concept mapped from leaf +448624005,Uniatrial biventricular connection with absent left sided atrioventricular connection with straddling valve (disorder),y,descendant of concept mapped from leaf +41371000119100,Shone complex (disorder),y,descendant of concept mapped from leaf +163309001,On examination - ascites (disorder),y,descendant of concept mapped from leaf +448637008,Coarctation of left pulmonary artery (disorder),y,descendant of concept mapped from leaf +703274008,Heart failure with reduced ejection fraction due to myocarditis (disorder),y,descendant of concept mapped from leaf +459066006,Anomalous origin of accessory coronary artery from pulmonary artery (disorder),y,descendant of concept mapped from leaf +286011000119101,Rheumatic mitral valve annular calcification (disorder),y,descendant of concept mapped from leaf +449140004,Right-left orientation of bicuspid pulmonary valve (disorder),y,descendant of concept mapped from leaf +76931005,Restrictive cardiomyopathy secondary to granulomas (disorder),y,descendant of concept mapped from leaf +359597003,Single internal mammary-coronary artery bypass (procedure),y,descendant of concept mapped from leaf +13453009,Anomalous muscle bands of left ventricle (disorder),y,descendant of concept mapped from leaf +445350004,Isolation of left subclavian artery (disorder),y,descendant of concept mapped from leaf +448475002,Absent pulmonary valve syndrome with ventricular septal defect of non Fallot type (disorder),y,descendant of concept mapped from leaf +108701000119102,Cardiomyopathy due to hypertension (disorder),y,descendant of concept mapped from leaf +461383006,Anomalous intramural course of proximal portion of coronary artery above aortic sinus (disorder),y,descendant of concept mapped from leaf +448004007,Acommissural unicuspid pulmonary valve (disorder),y,descendant of concept mapped from leaf +39987008,Congenital absence of right pulmonary artery (disorder),y,descendant of concept mapped from leaf +284881000119108,Right carotid artery atherosclerosis (disorder),y,descendant of concept mapped from leaf +60514000,Dilated cardiomyopathy secondary to familial storage disease (disorder),y,descendant of concept mapped from leaf +10757401000119104,Pre-existing hypertensive heart and chronic kidney disease in mother complicating childbirth (disorder),y,descendant of concept mapped from leaf +128557009,Congenital coronary artery fistula to right atrium (disorder),y,descendant of concept mapped from leaf +459062008,Fatal congenital nonlysosomal heart glycogenosis (disorder),y,descendant of concept mapped from leaf +449228007,Hypoplasia of left atrioventricular valve annulus in double inlet ventricle (disorder),y,descendant of concept mapped from leaf +441530006,Chronic diastolic heart failure (disorder),y,descendant of concept mapped from leaf +286031000119106,Rheumatic mitral valve prolapse (disorder),y,descendant of concept mapped from leaf +759931000000105,Congenital abnormality of left atrioventricular valve papillary muscle (disorder),y,descendant of concept mapped from leaf +472797003,Subaortic stenosis associated with functionally univentricular heart as complication of procedure (disorder),y,descendant of concept mapped from leaf +233708003,Post-upper airway obstruction pulmonary edema (disorder),y,descendant of concept mapped from leaf +471278002,Recurrent interatrial communication after prior cardiovascular surgical procedure (disorder),y,descendant of concept mapped from leaf +448092000,Vascular ring due to aberrant subclavian artery and bilateral arterial ducts (disorder),y,descendant of concept mapped from leaf +721009008,Heart defect and limb shortening syndrome (disorder),y,descendant of concept mapped from leaf +472820000,Abnormal ventriculoarterial connection with usual origin of left coronary artery from aortic sinus to right of nonfacing aortic sinus and usual origin of right coronary artery from aortic sinus to left of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +12238111000119106,Acute ST segment elevation myocardial infarction of inferolateral wall (disorder),y,descendant of concept mapped from leaf +204318003,Persistent ostium secundum (disorder),y,descendant of concept mapped from leaf +101281000119107,Congestive heart failure due to cardiomyopathy (disorder),y,descendant of concept mapped from leaf +723867002,Coarctation of aortic arch (disorder),y,descendant of concept mapped from leaf +447673004,Right ventricle to left of left ventricle (disorder),y,descendant of concept mapped from leaf +80762004,"Infusion of intra-arterial thrombolytic agent with percutaneous transluminal coronary angioplasty, multiple vessels (procedure)",y,descendant of concept mapped from leaf +458088003,Major systemic to pulmonary collateral artery (disorder),y,descendant of concept mapped from leaf +233124005,Construction of intraventricular left ventricle to aorta tunnel (procedure),y,descendant of concept mapped from leaf +448098001,Aneurysm of aortic sinus of Valsalva with protrusion into pulmonary artery (disorder),y,descendant of concept mapped from leaf +448729006,Common atrioventricular valve in functionally univentricular heart (disorder),y,descendant of concept mapped from leaf +448629000,Vascular ring with left aortic arch and right arterial ligament (disorder),y,descendant of concept mapped from leaf +448595006,Scimitar syndrome with additional anomalous pulmonary venous connection (disorder),y,descendant of concept mapped from leaf +448060001,Pulmonary trunk absent with absent right pulmonary artery (disorder),y,descendant of concept mapped from leaf +448975006,Aortico-left ventricular tunnel with extracardiac aneurysm of aortic wall (disorder),y,descendant of concept mapped from leaf +16228931000119102,Cardiomyopathy caused by drug (disorder),y,descendant of concept mapped from leaf +449551006,Single stenosis of left pulmonary artery (disorder),y,descendant of concept mapped from leaf +428196007,Mixed myocardial ischemia and infarction (disorder),y,descendant of concept mapped from leaf +448105006,Anomalous origin of pulmonary artery from patent arterial duct (disorder),y,descendant of concept mapped from leaf +726011000,Placement of stent in coronary artery bypass graft (procedure),y,descendant of concept mapped from leaf +450302005,Anomalous origin of left anterior descending coronary artery from pulmonary artery (disorder),y,descendant of concept mapped from leaf +448104005,Localized supravalvar aortic stenosis at sinutubular junction (disorder),y,descendant of concept mapped from leaf +8712002,Congenital subaortic stenosis due to fibromuscular shelf (disorder),y,descendant of concept mapped from leaf +460370001,Systemic to pulmonary collateral artery connecting with artery (disorder),y,descendant of concept mapped from leaf +85041007,Formation of conduit of right ventricle and pulmonary artery in repair of pulmonary artery atresia in truncus arteriosus (procedure),y,descendant of concept mapped from leaf +472101004,Interruption of aortic arch distal to subclavian artery (disorder),y,descendant of concept mapped from leaf +449492000,Divided left atrium with all pulmonary veins to proximal chamber and then to left atrium with additional pulmonary venous chamber communication to right atrium (disorder),y,descendant of concept mapped from leaf +707200002,Descending aorta anterior and same side as azygos vein with absent inferior vena cava (disorder),y,descendant of concept mapped from leaf +447874007,Congenital abnormality of atrial septum (disorder),y,descendant of concept mapped from leaf +240629003,Malarial shock lung (disorder),y,descendant of concept mapped from leaf +54830008,Dilated cardiomyopathy secondary to bacterial myocarditis (disorder),y,descendant of concept mapped from leaf +703253007,Acute ST segment elevation myocardial infarction of inferior wall involving right ventricle (disorder),y,descendant of concept mapped from leaf +471890009,Dilated cardiomyopathy with genetic marker (disorder),y,descendant of concept mapped from leaf +364006,Acute left-sided heart failure (disorder),y,descendant of concept mapped from leaf +728471000000108,Fenestrated atrial septal defect within oval fossa (disorder),y,descendant of concept mapped from leaf +399228007,Tetralogy of Fallot with absent pulmonary valve (disorder),y,descendant of concept mapped from leaf +64041007,Primary idiopathic restrictive cardiomyopathy (disorder),y,descendant of concept mapped from leaf +10335000,Chronic right-sided heart failure (disorder),y,descendant of concept mapped from leaf +111284004,Chronic inactive rheumatic heart disease (disorder),y,descendant of concept mapped from leaf +447838003,Pulmonary atresia and ventricular septal defect with aorta from left ventricle (disorder),y,descendant of concept mapped from leaf +473444001,Anomalous origin of left coronary artery (disorder),y,descendant of concept mapped from leaf +472796007,Congenital subaortic stenosis due to restrictive ventricular septal defect associated with functionally univentricular heart (disorder),y,descendant of concept mapped from leaf +46113002,Hypertensive heart failure (disorder),y,descendant of concept mapped from leaf +448181004,Anomalous coronary venous return (disorder),y,descendant of concept mapped from leaf +120851000119104,Systolic heart failure stage D (disorder),y,descendant of concept mapped from leaf +459180002,Aneurysm of patch of atrioventricular septal defect (disorder),y,descendant of concept mapped from leaf +15713081000119108,Acute ST segment elevation myocardial infarction due to left coronary artery occlusion (disorder),y,descendant of concept mapped from leaf +31085000,Rheumatic mitral regurgitation (disorder),y,descendant of concept mapped from leaf +94703000,Multiple intracardiac shunts (disorder),y,descendant of concept mapped from leaf +449232001,Aortic arch hypoplasia between carotid arteries (disorder),y,descendant of concept mapped from leaf +36471000,Dilated cardiomyopathy secondary to systemic lupus erythematosus (disorder),y,descendant of concept mapped from leaf +461111008,Anomalous course of coronary artery anterior to aorta (disorder),y,descendant of concept mapped from leaf +461433002,Major systemic to pulmonary collateral artery with absent pulmonary arteries proximal to hilar bifurcation (disorder),y,descendant of concept mapped from leaf +703165004,Acute ST segment elevation myocardial infarction of anterior wall involving right ventricle (disorder),y,descendant of concept mapped from leaf +285981000119103,Acute ST segment elevation myocardial infarction involving left anterior descending coronary artery (disorder),y,descendant of concept mapped from leaf +703212004,Acute myocardial infarction during procedure (disorder),y,descendant of concept mapped from leaf +120891000119109,Diastolic heart failure stage C (disorder),y,descendant of concept mapped from leaf +448001004,Right ventricular outflow tract obstruction due to aneurysm of membranous septum (disorder),y,descendant of concept mapped from leaf +447861001,Partial anomalous pulmonary venous connection with anomalous veins connecting first to pulmonary venous confluence (disorder),y,descendant of concept mapped from leaf +736964008,Bypass of three coronary arteries with prosthesis (procedure),y,descendant of concept mapped from leaf +447689001,Prolapse of Eustachian valve through atrial septum (disorder),y,descendant of concept mapped from leaf +81552002,Rheumatic mitral valve insufficiency AND aortic valve stenosis (disorder),y,descendant of concept mapped from leaf +448320008,Divided left atrium with some pulmonary veins to proximal chamber (disorder),y,descendant of concept mapped from leaf +232973007,Allotransplant of heart (procedure),y,descendant of concept mapped from leaf +763778003,"Larsen-like syndrome beta-1,3-glucuronyltransferase 3 type (disorder)",y,descendant of concept mapped from leaf +371808007,Recurrent angina status post percutaneous transluminal coronary angioplasty (disorder),y,descendant of concept mapped from leaf +459183000,Aneurysm of patch of right ventricular outflow tract (disorder),y,descendant of concept mapped from leaf +66989003,Chronic right-sided congestive heart failure (disorder),y,descendant of concept mapped from leaf +5203004,Myxomatosis of cardiac valve (disorder),y,descendant of concept mapped from leaf +84733009,Dilated cardiomyopathy secondary to nutritive deficiency (disorder),y,descendant of concept mapped from leaf +764965000,Familial thoracic aortic aneurysm and aortic dissection (disorder),y,descendant of concept mapped from leaf +123642008,Right coronary artery occlusion (disorder),y,descendant of concept mapped from leaf +426263006,Congestive heart failure due to left ventricular systolic dysfunction (disorder),y,descendant of concept mapped from leaf +448745008,Aneurysm of aortic sinus of Valsalva with rupture to right atrium (disorder),y,descendant of concept mapped from leaf +448304003,Vascular ring with left aortic arch to right descending aorta and right patent arterial duct (disorder),y,descendant of concept mapped from leaf +59464004,Rheumatic mitral AND aortic valve regurgitation (disorder),y,descendant of concept mapped from leaf +736962007,Bypass of four or more coronary arteries with prosthesis (procedure),y,descendant of concept mapped from leaf +16253001,Dilated cardiomyopathy secondary to peripartum heart disease (disorder),y,descendant of concept mapped from leaf +461629004,Right aortic arch branching pattern (disorder),y,descendant of concept mapped from leaf +63183009,Primary idiopathic hypertrophic cardiomyopathy (disorder),y,descendant of concept mapped from leaf +719451006,Dilated cardiomyopathy with hypergonadotropic hypogonadism syndrome (disorder),y,descendant of concept mapped from leaf +449532000,Congenital abnormality of anterior cardiac vein (disorder),y,descendant of concept mapped from leaf +360481003,Common atrioventricular canal (disorder),y,descendant of concept mapped from leaf +448414008,Restrictive interatrial communication (disorder),y,descendant of concept mapped from leaf +71603004,Hemorrhagic ascites (disorder),y,descendant of concept mapped from leaf +15713161000119100,Acute ST segment elevation myocardial infarction of septum (disorder),y,descendant of concept mapped from leaf +448871001,Subaortic stenosis due to restrictive ventricular septal defect in functionally univentricular heart (disorder),y,descendant of concept mapped from leaf +15712961000119108,Acute ST segment elevation myocardial infarction of anteroseptal wall (disorder),y,descendant of concept mapped from leaf +371811008,Recurrent angina status post rotational atherectomy (disorder),y,descendant of concept mapped from leaf +717812000,"Congenital cataract, hypertrophic cardiomyopathy, mitochondrial myopathy syndrome (disorder)",y,descendant of concept mapped from leaf +447932003,Double outlet ventriculoarterial connections (disorder),y,descendant of concept mapped from leaf +93262004,Congenital hypoplasia of heart (disorder),y,descendant of concept mapped from leaf +445131007,Left ventricular outflow tract obstruction due to fibromuscular tunnel (disorder),y,descendant of concept mapped from leaf +414088005,Emergency coronary artery bypass graft (procedure),y,descendant of concept mapped from leaf +75942006,Total correction of transposition of great vessels (procedure),y,descendant of concept mapped from leaf +30670000,"Anastomosis of thoracic artery to coronary artery, double (procedure)",y,descendant of concept mapped from leaf +109429002,Single muscular ventricular septum defect (disorder),y,descendant of concept mapped from leaf +449146005,Replacement of root of aorta with reimplantation of coronary arteries using button technique (procedure),y,descendant of concept mapped from leaf +713523008,Cardiomyopathy co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +71799002,Rheumatic mitral valve stenosis AND aortic valve insufficiency (disorder),y,descendant of concept mapped from leaf +447850009,Double aortic arch with right arch dominant and coarctation of left arch (disorder),y,descendant of concept mapped from leaf +447681003,Continuity between mitral valve and pulmonary valve (disorder),y,descendant of concept mapped from leaf +21057005,Manipulation of coronary artery (procedure),y,descendant of concept mapped from leaf +445310002,Left ventricular outflow tract obstruction due to diaphragm (disorder),y,descendant of concept mapped from leaf +96751000119106,Hypertensive heart AND chronic kidney disease stage 1 (disorder),y,descendant of concept mapped from leaf +413444003,Acute myocardial ischemia (disorder),y,descendant of concept mapped from leaf +68602002,Primary endomyocardial fibrosis cardiomyopathy (disorder),y,descendant of concept mapped from leaf +460531008,Anomalous origin of right coronary artery from left circumflex coronary artery (disorder),y,descendant of concept mapped from leaf +18192007,Acute rheumatic endocarditis (disorder),y,descendant of concept mapped from leaf +448627003,Vascular ring with left aortic arch and right arterial duct arising from aberrant retroesophageal brachiocephalic artery (disorder),y,descendant of concept mapped from leaf +15964701000119109,Acute cor pulmonale co-occurrent and due to saddle embolus of pulmonary artery (disorder),y,descendant of concept mapped from leaf +723448007,Polyvalvular heart disease syndrome (disorder),y,descendant of concept mapped from leaf +253728007,Right dominant coronary system (disorder),y,descendant of concept mapped from leaf +30496006,Dilated cardiomyopathy secondary to viral myocarditis (disorder),y,descendant of concept mapped from leaf +722051004,"Obesity, colitis, hypothyroidism, cardiac hypertrophy, developmental delay syndrome (disorder)",y,descendant of concept mapped from leaf +461331004,Malposition of coronary artery orifice (disorder),y,descendant of concept mapped from leaf +80331001,Incision of coronary artery (procedure),y,descendant of concept mapped from leaf +10930001,Congenital atresia of pulmonary artery (disorder),y,descendant of concept mapped from leaf +448061002,Shelf-like supravalvar aortic stenosis (disorder),y,descendant of concept mapped from leaf +43121002,Rheumatic heart valve regurgitation (disorder),y,descendant of concept mapped from leaf +46696008,Dilated cardiomyopathy secondary to dermatomyositis (disorder),y,descendant of concept mapped from leaf +447997006,Vascular ring with retrotracheal right pulmonary artery from ascending aorta (disorder),y,descendant of concept mapped from leaf +719379001,Microcephalus with cardiac defect and lung malsegmentation syndrome (disorder),y,descendant of concept mapped from leaf +15544002,Restrictive cardiomyopathy secondary to infiltrations (disorder),y,descendant of concept mapped from leaf +461557000,Congenital atresia of aortic arch (disorder),y,descendant of concept mapped from leaf +373131000,Non-restrictive ventricular septal defect (disorder),y,descendant of concept mapped from leaf +264162009,Posteromedial muscle band (disorder),y,descendant of concept mapped from leaf +461112001,Anomalous course of coronary artery anterior to pulmonary trunk (disorder),y,descendant of concept mapped from leaf +447968008,Descending aorta anterior and same side as azygos vein with azygos continuity of inferior vena cava (disorder),y,descendant of concept mapped from leaf +707478007,Pulmonary trunk stenosis as complication of procedure (disorder),y,descendant of concept mapped from leaf +405599002,Aortocoronary artery bypass graft with three vein grafts (procedure),y,descendant of concept mapped from leaf +15629591000119103,Congestive heart failure stage B due to ischemic cardiomyopathy (disorder),y,descendant of concept mapped from leaf +759771000000109,Subaortic left ventricular outflow tract obstruction (disorder),y,descendant of concept mapped from leaf +15629541000119106,Congestive heart failure stage C due to Ischemic cardiomyopathy (disorder),y,descendant of concept mapped from leaf +21789005,Gas endarterectomy of coronary artery (procedure),y,descendant of concept mapped from leaf +445106006,Congenital dilation of left pulmonary artery (disorder),y,descendant of concept mapped from leaf +448625006,Univentricular atrioventricular connection with absent left sided atrioventricular connection (disorder),y,descendant of concept mapped from leaf +471288001,Anomalous origin of left coronary artery and right coronary artery with dual orifices from aortic sinus to right of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +448510002,Stenosis of left pulmonary artery (disorder),y,descendant of concept mapped from leaf +128584005,Congenital pulmonary artery conduit (disorder),y,descendant of concept mapped from leaf +370141003,Rheumatic mitral AND aortic valve obstruction (disorder),y,descendant of concept mapped from leaf +253641003,Localized supravalvar aortic stenosis (disorder),y,descendant of concept mapped from leaf +15960141000119102,Angina co-occurrent and due to coronary arteriosclerosis (disorder),y,descendant of concept mapped from leaf +445209005,Congenital hypoplasia of left pulmonary artery (disorder),y,descendant of concept mapped from leaf +448920004,Congenital abnormality of mitral subvalvular apparatus (disorder),y,descendant of concept mapped from leaf +447822009,Congenital prolapse of aortic valve (disorder),y,descendant of concept mapped from leaf +15712881000119105,Acute ST segment elevation myocardial infarction of anterolateral wall (disorder),y,descendant of concept mapped from leaf +371862006,Depression of left ventricular systolic function (finding),y,descendant of concept mapped from leaf +448063004,Congenital abnormality of posterior cardiac vein of left ventricle (disorder),y,descendant of concept mapped from leaf +5148006,Hypertensive heart disease with congestive heart failure (disorder),y,descendant of concept mapped from leaf +18687009,Rheumatic disease of pulmonary valve (disorder),y,descendant of concept mapped from leaf +371809004,Recurrent angina status post coronary stent placement (disorder),y,descendant of concept mapped from leaf +263960005,Bilateral atria (disorder),y,descendant of concept mapped from leaf +759731000000107,Anomalous anterolateral muscle bands of left ventricle (disorder),y,descendant of concept mapped from leaf +447772003,Persisting fifth aortic arch with double barrell arch (disorder),y,descendant of concept mapped from leaf +92830003,Combined valvular-subvalvular pulmonic stenosis (disorder),y,descendant of concept mapped from leaf +57803009,Rheumatic chorea with heart involvement (disorder),y,descendant of concept mapped from leaf +276526002,Chylous ascites of newborn (disorder),y,descendant of concept mapped from leaf +764452004,Retinal arterial macroaneurysm with supravalvular pulmonic stenosis (disorder),y,descendant of concept mapped from leaf +736973000,Allograft bypass of two coronary arteries (procedure),y,descendant of concept mapped from leaf +153941000119100,Chronic combined systolic and diastolic heart failure (disorder),y,descendant of concept mapped from leaf +406428006,Hypertrophy of septomarginal trabeculation (disorder),y,descendant of concept mapped from leaf +54854003,Creation of conduit of right ventricle and pulmonary artery in repair of pulmonary artery atresia (procedure),y,descendant of concept mapped from leaf +445027003,Left superior caval vein persisting to coronary sinus (disorder),y,descendant of concept mapped from leaf +371805005,Significant coronary bypass graft disease (disorder),y,descendant of concept mapped from leaf +83978005,Primary familial hypertrophic cardiomyopathy (disorder),y,descendant of concept mapped from leaf +448154004,Vascular ring with left aortic arch and right arterial duct arising from retroesophageal aortic diverticulum (disorder),y,descendant of concept mapped from leaf +86995005,Dilated cardiomyopathy secondary to mucopolysaccharidosis (disorder),y,descendant of concept mapped from leaf +446668003,Obstructed pulmonary venous connection due to extrinsic compression (disorder),y,descendant of concept mapped from leaf +10091002,High output heart failure (disorder),y,descendant of concept mapped from leaf +93558006,Hypertrophic cardiomyopathy secondary to hyperthyroidism (disorder),y,descendant of concept mapped from leaf +461110009,Anomalous course of coronary artery posterior to pulmonary trunk and aorta (disorder),y,descendant of concept mapped from leaf +128563000,Juxtaposed atrial appendage (disorder),y,descendant of concept mapped from leaf +7169009,Congenital supravalvular aortic stenosis (disorder),y,descendant of concept mapped from leaf +204315000,Atrial septal defect within oval fossa (disorder),y,descendant of concept mapped from leaf +720639008,"Coloboma, congenital heart disease, ichthyosiform dermatosis, intellectual disability ear anomaly syndrome (disorder)",y,descendant of concept mapped from leaf +447697008,Unicommissural unicuspid pulmonary valve (disorder),y,descendant of concept mapped from leaf +15960061000119102,Unstable angina co-occurrent and due to coronary arteriosclerosis (disorder),y,descendant of concept mapped from leaf +447937009,Congenital abnormality of aortic valve cusp (disorder),y,descendant of concept mapped from leaf +471858004,Valvular cardiomyopathy (disorder),y,descendant of concept mapped from leaf +109431006,Ebstein-like malformation of the mitral valve (disorder),y,descendant of concept mapped from leaf +449354002,Hypoplasia of pulmonary cusps of absent pulmonary valve type (disorder),y,descendant of concept mapped from leaf +111285003,Dilated cardiomyopathy secondary to metabolic disorder (disorder),y,descendant of concept mapped from leaf +194709000,Acute rheumatic myocarditis (disorder),y,descendant of concept mapped from leaf +447938004,Congenital abnormality of cardiac vein (disorder),y,descendant of concept mapped from leaf +460500001,Histiocytoid mitochondrial cardiomyopathy due to cytochrome aa3 deficiency (disorder),y,descendant of concept mapped from leaf +426012001,Right heart failure due to pulmonary hypertension (disorder),y,descendant of concept mapped from leaf +41964001,Hypertrophic cardiomyopathy secondary to neuromuscular disorder (disorder),y,descendant of concept mapped from leaf +736963002,Bypass of one coronary artery with prosthesis (procedure),y,descendant of concept mapped from leaf +1131009,Congenital valvular insufficiency (disorder),y,descendant of concept mapped from leaf +723993005,Sensorineural deafness with dilated cardiomyopathy syndrome (disorder),y,descendant of concept mapped from leaf +278928000,Transient mitral regurgitation of newborn (disorder),y,descendant of concept mapped from leaf +78862003,Ayerza's syndrome (disorder),y,descendant of concept mapped from leaf +461572001,Atresia of aortic arch with fibrous cord between subclavian artery and common carotid artery (disorder),y,descendant of concept mapped from leaf +472853005,Stenosis of fetal common atrioventricular valve (disorder),y,descendant of concept mapped from leaf +371803003,Multi vessel coronary artery disease (disorder),y,descendant of concept mapped from leaf +471292008,Anomalous origin of right coronary artery and circumflex artery from aortic sinus to right of nonfacing aortic sinus and anomalous origin of left anterior descending artery from aortic sinus to left on nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +447840008,Stenosis of right pulmonary artery (disorder),y,descendant of concept mapped from leaf +460906001,Vascular ring with mirror image branching of right aortic arch and left ligamentum arteriosum (disorder),y,descendant of concept mapped from leaf +723858002,Ventricular aneurysm due to and following acute myocardial infarction (disorder),y,descendant of concept mapped from leaf +720610008,Cardiomyopathy and renal anomaly syndrome (disorder),y,descendant of concept mapped from leaf +460595001,Systemic to pulmonary collateral artery connecting with central pulmonary arteries (disorder),y,descendant of concept mapped from leaf +446657003,Criss-cross heart with rightward rotation (disorder),y,descendant of concept mapped from leaf +471279005,Recurrent atrial component of atrioventricular septal defect after prior cardiovascular surgical procedure (disorder),y,descendant of concept mapped from leaf +447812003,Left superior vena cava persisting to right atrium and left atrium (disorder),y,descendant of concept mapped from leaf +12963004,Dialysis-associated ascites (disorder),y,descendant of concept mapped from leaf +448575000,Fenestrated interatrial communication within oval fossa (disorder),y,descendant of concept mapped from leaf +50270004,Dilated cardiomyopathy secondary to Friedreich's ataxia (disorder),y,descendant of concept mapped from leaf +460594002,Vascular ring with right aortic arch and left ductus arteriosus from retroesophageal diverticulum of aorta (disorder),y,descendant of concept mapped from leaf +70142008,Atrial septal defect (disorder),y,descendant of concept mapped from leaf +84725008,Restrictive cardiomyopathy secondary to mucopolysaccharidosis (disorder),y,descendant of concept mapped from leaf +447876009,Congenital aneurysm of subaortic left ventricle (disorder),y,descendant of concept mapped from leaf +702424003,Dilated cardiomyopathy 3B (disorder),y,descendant of concept mapped from leaf +59494005,Congenital septal defect of heart (disorder),y,descendant of concept mapped from leaf +725416005,Cardiomyopathy co-occurrent and due to cirrhosis of liver (disorder),y,descendant of concept mapped from leaf +233710001,Chemical-induced pulmonary edema (disorder),y,descendant of concept mapped from leaf +72481000119103,Congestive heart failure as early postoperative complication (disorder),y,descendant of concept mapped from leaf +449459006,Atrioventricular septal defect with atrioventricular valve regurgitation through left inferior bridging leaflet lateral mural commissure (disorder),y,descendant of concept mapped from leaf +717943008,"Brain malformation, congenital heart disease, postaxial polydactyly syndrome (disorder)",y,descendant of concept mapped from leaf +449118008,Left ventricular outflow tract obstruction due to prolapsed arterial valve (disorder),y,descendant of concept mapped from leaf +609507007,Induced termination of pregnancy complicated by cardiac failure (disorder),y,descendant of concept mapped from leaf +471290000,Anomalous origin of left anterior descending artery from aortic sinus to right of nonfacing aortic sinus and anomalous origin of circumflex artery and right coronary artery from aortic sinus to left of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +717859007,"Hydrocephalus, cardiac malformation, dense bone syndrome (disorder)",y,descendant of concept mapped from leaf +448155003,Pulmonary atresia with ventricular septal defect of Fallot type (disorder),y,descendant of concept mapped from leaf +447701006,Intermediate aortopulmonary window with adequate superior and inferior rim (disorder),y,descendant of concept mapped from leaf +86194008,Dilated cardiomyopathy secondary to infection (disorder),y,descendant of concept mapped from leaf +84871007,Acute rheumatic fever with valvulitis (disorder),y,descendant of concept mapped from leaf +471880001,Heart failure due to end stage congenital heart disease (disorder),y,descendant of concept mapped from leaf +93076005,Congenital hypertrophy of tricuspid valve (disorder),y,descendant of concept mapped from leaf +724550005,Neonatal cardiac failure due to pulmonary overperfusion (disorder),y,descendant of concept mapped from leaf +447661004,Diverticulum of coronary sinus (disorder),y,descendant of concept mapped from leaf +1474004,Hypertensive heart AND renal disease complicating AND/OR reason for care during childbirth (disorder),y,descendant of concept mapped from leaf +719400000,Lethal faciocardiomelic dysplasia (disorder),y,descendant of concept mapped from leaf +92941000,Congenital abnormal shape of pulmonary valve (disorder),y,descendant of concept mapped from leaf +472803004,Acquired abnormality of atrioventricular (not morphologically mitral or tricuspid) valve associated with atrioventricular septal defect (disorder),y,descendant of concept mapped from leaf +74249003,Dilated cardiomyopathy secondary to malignancy (disorder),y,descendant of concept mapped from leaf +33258008,Primary eosinophilic endomyocardial restrictive cardiomyopathy (disorder),y,descendant of concept mapped from leaf +253347007,Right atrial appendage aneurysm (disorder),y,descendant of concept mapped from leaf +338892004,"Complete repair of anomalous venous return, supracardiac type (procedure)",y,descendant of concept mapped from leaf +460538002,Anomalous origin of left coronary artery from right coronary artery (disorder),y,descendant of concept mapped from leaf +472327008,Fetal dilated cardiomyopathy (disorder),y,descendant of concept mapped from leaf +284871000119105,Left carotid artery atherosclerosis (disorder),y,descendant of concept mapped from leaf +472787007,Left ventricular outflow tract obstruction due to neoplasm (disorder),y,descendant of concept mapped from leaf +64072006,Acute rheumatic pancarditis (disorder),y,descendant of concept mapped from leaf +23341000119109,Congestive heart failure with right heart failure (disorder),y,descendant of concept mapped from leaf +54073003,Monocuspid cardiac valve (disorder),y,descendant of concept mapped from leaf +461587006,Congenital luminal atresia of aortic arch distal to subclavian artery (disorder),y,descendant of concept mapped from leaf +448793002,Bicuspid truncal valve (disorder),y,descendant of concept mapped from leaf +443725002,Repair of total anomalous pulmonary venous connection to right atrium (procedure),y,descendant of concept mapped from leaf +457612009,Thrombosis of tricuspid valve (disorder),y,descendant of concept mapped from leaf +471293003,Anomalous origin of left anterior descending artery and right coronary artery from aortic sinus to right of nonfacing aortic sinus and anomalous origin of circumflex artery from aortic sinus to left of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +735566005,Rupture of coronary artery co-occurrent and due to aneurysm of coronary artery (disorder),y,descendant of concept mapped from leaf +20005002,Recurrent rheumatic heart disease (disorder),y,descendant of concept mapped from leaf +15960381000119109,Angina co-occurrent and due to arteriosclerosis of coronary artery bypass graft (disorder),y,descendant of concept mapped from leaf +111000119104,Nonischemic congestive cardiomyopathy (disorder),y,descendant of concept mapped from leaf +703209002,Subsequent ST segment elevation myocardial infarction of inferior wall (disorder),y,descendant of concept mapped from leaf +461577007,Atresia of aortic arch with fibrous cord between left common carotid artery and right common carotid artery (disorder),y,descendant of concept mapped from leaf +119565001,"Coronary artery bypass graft, anastomosis of artery of thorax to coronary artery (procedure)",y,descendant of concept mapped from leaf +448827000,Ventricular septal defect with absent outlet septum and overriding truncal valve with inferior muscular rim (disorder),y,descendant of concept mapped from leaf +419132001,Minimally invasive direct coronary artery bypass (procedure),y,descendant of concept mapped from leaf +460597009,Systemic to pulmonary collateral artery connecting with tracheobronchial arteries (disorder),y,descendant of concept mapped from leaf +445167000,Congenital dilation of right pulmonary artery (disorder),y,descendant of concept mapped from leaf +928341000000103,History of heart-lung transplant recipient (situation),y,descendant of concept mapped from leaf +74960003,Acute left-sided congestive heart failure (disorder),y,descendant of concept mapped from leaf +371812001,Recurrent angina status post directional coronary atherectomy (disorder),y,descendant of concept mapped from leaf +471286002,Anomalous origin of coronary artery from aortic sinus to right of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +443343001,Acute diastolic heart failure (disorder),y,descendant of concept mapped from leaf +698640000,Hypertension in the puerperium with pulmonary edema (disorder),y,descendant of concept mapped from leaf +446670007,Aortic orifice right side by side with respect to pulmonary orifice (disorder),y,descendant of concept mapped from leaf +371807002,Atypical angina (disorder),y,descendant of concept mapped from leaf +129582000,Congenital coronary artery fistula to pulmonary artery (disorder),y,descendant of concept mapped from leaf +39693003,Dilated cardiomyopathy secondary to granuloma (disorder),y,descendant of concept mapped from leaf +117051000119103,Chronic total occlusion of coronary artery (disorder),y,descendant of concept mapped from leaf +759461000000109,Congenital abnormality of leaflet of mitral valve (disorder),y,descendant of concept mapped from leaf +448278002,Coronary sinus drainage cephalad to left superior vena cava (disorder),y,descendant of concept mapped from leaf +449139001,Commissural fusion of truncal valve (disorder),y,descendant of concept mapped from leaf +471291001,Anomalous origin of right coronary artery from aortic sinus to right of nonfacing aortic sinus and anomalous origin of left coronary artery from aortic sinus to left of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +128555001,Congenital coronary artery fistula to left atrium (disorder),y,descendant of concept mapped from leaf +276518005,Transient tricuspid regurgitation of newborn (disorder),y,descendant of concept mapped from leaf +268187005,Congenital pulmonary artery aneurysm (disorder),y,descendant of concept mapped from leaf +470752003,Progression of fetal right ventricular outflow tract obstruction (disorder),y,descendant of concept mapped from leaf +723089002,Acquired atrial septal defect (disorder),y,descendant of concept mapped from leaf +55565007,Cardiac failure after obstetrical surgery AND/OR other procedure including delivery (disorder),y,descendant of concept mapped from leaf +447915002,Ebstein's anomaly of left sided tricuspid valve with discordant atrioventricular connections (disorder),y,descendant of concept mapped from leaf +448357002,Midline anterior apex of heart (disorder),y,descendant of concept mapped from leaf +123641001,Left coronary artery occlusion (disorder),y,descendant of concept mapped from leaf +253698005,Isolation of brachiocephalic trunk (disorder),y,descendant of concept mapped from leaf +448085005,Acommissural unicuspid aortic valve (disorder),y,descendant of concept mapped from leaf +28284007,Rheumatic heart valve stenosis with insufficiency (disorder),y,descendant of concept mapped from leaf +90487008,Aortocoronary bypass of two coronary arteries (procedure),y,descendant of concept mapped from leaf +88318005,Rheumatic tricuspid valve stenosis (disorder),y,descendant of concept mapped from leaf +724437007,Compression of trachea and esophagus co-occurrent and due to congenital anomaly of aortic arch (disorder),y,descendant of concept mapped from leaf +450310006,Major systemic to pulmonary collateral artery supplying part of left lung (disorder),y,descendant of concept mapped from leaf +448612003,Single ventricular outlet above both ventricles (disorder),y,descendant of concept mapped from leaf +119564002,Internal mammary-coronary artery bypass graft (procedure),y,descendant of concept mapped from leaf +40023000,Rheumatic mitral valve failure (disorder),y,descendant of concept mapped from leaf +89819002,Cardiac insufficiency during AND/OR resulting from a procedure (disorder),y,descendant of concept mapped from leaf +460437005,Anomalous origin of dual left anterior descending coronary arteries from right coronary artery and left coronary artery (disorder),y,descendant of concept mapped from leaf +722461004,Meacham syndrome (disorder),y,descendant of concept mapped from leaf +253692006,Bronchopulmonary collateral artery (disorder),y,descendant of concept mapped from leaf +446326008,Premature restriction of foramen ovale (disorder),y,descendant of concept mapped from leaf +449600009,Malattachment of atrial septum with superior aspect of septum primum to left and posterior (disorder),y,descendant of concept mapped from leaf +470758004,Refractory ascites (disorder),y,descendant of concept mapped from leaf +78741000119103,Acute coronary occlusion without myocardial infarction (disorder),y,descendant of concept mapped from leaf +42481001,Excision of coronary artery (procedure),y,descendant of concept mapped from leaf +461420008,Anomalous coronary artery with acute angulation of less than 45 degrees relative to aorta (disorder),y,descendant of concept mapped from leaf +92923008,Congenital abnormal shape of mitral valve (disorder),y,descendant of concept mapped from leaf +447286000,Ventricular imbalance with dominant right ventricle and hypoplastic left ventricle (disorder),y,descendant of concept mapped from leaf +709981002,Coronary artery atherectomy using fluoroscopic guidance (procedure),y,descendant of concept mapped from leaf +447839006,Pulmonary atresia and ventricular septal defect with aorta from right ventricle (disorder),y,descendant of concept mapped from leaf +448303009,Vascular ring with left aortic arch to right descending aorta and right arterial ligament (disorder),y,descendant of concept mapped from leaf +449428009,Divided left atrium with all pulmonary veins to proximal chamber and then to left atrium with additional pulmonary venous chamber communication (disorder),y,descendant of concept mapped from leaf +16063004,Rheumatic disease of heart valve (disorder),y,descendant of concept mapped from leaf +472319004,Fatal infantile mitochondrial cardiomyopathy (disorder),y,descendant of concept mapped from leaf +26865008,Congenital absence of superior vena cava (disorder),y,descendant of concept mapped from leaf +1089441000000103,Postoperative transmural myocardial infarction (disorder),y,descendant of concept mapped from leaf +447702004,Confluent aortopulmonary window with minimal superior and inferior rim (disorder),y,descendant of concept mapped from leaf +471287006,Anomalous origin of left coronary artery and right coronary artery with dual orifices from aortic sinus to left of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +460365008,Systemic to pulmonary collateral artery from right renal artery (disorder),y,descendant of concept mapped from leaf +460588005,Anomalous origin of left circumflex coronary artery from right coronary aortic sinus (disorder),y,descendant of concept mapped from leaf +81266008,Heart revascularization (procedure),y,descendant of concept mapped from leaf +735581004,Ventricular septal defect following procedure (disorder),y,descendant of concept mapped from leaf +460510005,Anomalous origin of coronary arteries from anterior aortic sinus (disorder),y,descendant of concept mapped from leaf +822501000000101,Endoscopic robot assisted coronary artery bypass (procedure),y,descendant of concept mapped from leaf +449567000,Overriding left ventriculoarterial valve (disorder),y,descendant of concept mapped from leaf +449568005,Overriding right ventriculoarterial valve (disorder),y,descendant of concept mapped from leaf +128567004,Congenital pulmonary venous atrium (disorder),y,descendant of concept mapped from leaf +448604006,Congenital abnormality of pulmonary valve cusp (disorder),y,descendant of concept mapped from leaf +119773008,Coronary artery reconstruction (procedure),y,descendant of concept mapped from leaf +284861000119104,Atherosclerosis of bilateral carotid arteries (disorder),y,descendant of concept mapped from leaf +15960581000119102,Angina co-occurrent and due to arteriosclerosis of autologous vein coronary artery bypass graft (disorder),y,descendant of concept mapped from leaf +128568009,Congenital systemic venous atrium (disorder),y,descendant of concept mapped from leaf +447285001,Ventricular imbalance (disorder),y,descendant of concept mapped from leaf +448331000,Atrioventricular septal defect with restrictive ventricular component (disorder),y,descendant of concept mapped from leaf +449563001,Absence of primary mitral chordae tendinae (disorder),y,descendant of concept mapped from leaf +448780007,Ventricular septal defect with absent outlet septum and overriding truncal valve with extension of membranous septum (disorder),y,descendant of concept mapped from leaf +728481000000105,Non-restrictive interatrial communication septal defect (disorder),y,descendant of concept mapped from leaf +735571003,Acquired ventricular septal defect (disorder),y,descendant of concept mapped from leaf +449353008,Hypoplasia of trabecular portion of left ventricle (disorder),y,descendant of concept mapped from leaf +445264002,Atrioventricular septal defect with ventricular imbalance consisting of dominant left ventricle and hypoplastic right ventricle (disorder),y,descendant of concept mapped from leaf +718713000,Hypertrophic cardiomyopathy with hypotonia and lactic acidosis syndrome (disorder),y,descendant of concept mapped from leaf +78320000,Quadricuspid cardiac valve (disorder),y,descendant of concept mapped from leaf +447284002,Double outlet right ventricle with intact ventricular septum (disorder),y,descendant of concept mapped from leaf +18037001,Bile ascites (disorder),y,descendant of concept mapped from leaf +736972005,Allograft bypass of three coronary arteries (procedure),y,descendant of concept mapped from leaf +15256002,Transmyocardial revascularization by laser technique (procedure),y,descendant of concept mapped from leaf +726704006,"Cataract, congenital heart disease, neural tube defect syndrome (disorder)",y,descendant of concept mapped from leaf +448305002,Vascular ring with malrotation and dextroversion of heart and hypoplasia of right lung and left arterial duct (disorder),y,descendant of concept mapped from leaf +447571007,Obstructed pulmonary venous connection due to extrinsic compression between left pulmonary artery and bronchus (disorder),y,descendant of concept mapped from leaf +449029005,Imperforate ventriculoarterial valve (disorder),y,descendant of concept mapped from leaf +698594003,Symptomatic congestive heart failure (disorder),y,descendant of concept mapped from leaf +448310003,Right ventricular outflow tract obstruction due to malaligned outlet septum (disorder),y,descendant of concept mapped from leaf +61490001,"Angina, class I (disorder)",y,descendant of concept mapped from leaf +448516008,Double outlet right ventricle with doubly committed ventricular septal defect and pulmonary stenosis (disorder),y,descendant of concept mapped from leaf +35577008,Holoacardius acephalus (disorder),y,descendant of concept mapped from leaf +447962009,Divided left atrium with restrictive outlet of proximal chamber to left atrium (disorder),y,descendant of concept mapped from leaf +472783006,Stenosis of subvalvular region of neoaortic valve (disorder),y,descendant of concept mapped from leaf +442304009,Combined systolic and diastolic dysfunction (finding),y,descendant of concept mapped from leaf +31080005,Pericarditis secondary to Mulibrey nanism (disorder),y,descendant of concept mapped from leaf +448084009,Absent pulmonary trunk (disorder),y,descendant of concept mapped from leaf +448097006,Abnormal course of aortic arch (disorder),y,descendant of concept mapped from leaf +449085001,Pulmonary artery connecting to coronary artery via collateral artery (disorder),y,descendant of concept mapped from leaf +762251008,Double outlet right ventricle with subaortic or doubly committed ventricular septal defect without pulmonary stenosis - ventricular septal defect type (disorder),y,descendant of concept mapped from leaf +461384000,Anomalous course of coronary artery across right ventricular outflow tract (disorder),y,descendant of concept mapped from leaf +53703001,Primary eosinophilic endomyocardial cardiomyopathy (disorder),y,descendant of concept mapped from leaf +472793004,Subaortic stenosis as complication of procedure (disorder),y,descendant of concept mapped from leaf +766976003,"Pulmonary valve agenesis, tetralogy of Fallot, absence of ductus arteriosus syndrome (disorder)",y,descendant of concept mapped from leaf +447829000,Congenital abnormality of tricuspid chordae tendinae (disorder),y,descendant of concept mapped from leaf +447667000,Divided left atrium with all pulmonary veins to proximal chamber without communication to left atrium (disorder),y,descendant of concept mapped from leaf +443380007,Percutaneous embolization of coronary arteriovenous fistula using fluoroscopic guidance (procedure),y,descendant of concept mapped from leaf +450305007,Coarctation of infrarenal abdominal aorta (disorder),y,descendant of concept mapped from leaf +472855003,Stenosis of fetal truncal valve (disorder),y,descendant of concept mapped from leaf +698638005,Pregnancy induced hypertension with pulmonary edema (disorder),y,descendant of concept mapped from leaf +70998009,Acute myocardial infarction of posterobasal wall (disorder),y,descendant of concept mapped from leaf +413905004,Congenital absence of heart structure (disorder),y,descendant of concept mapped from leaf +58629009,Dilated cardiomyopathy secondary to amyloidosis (disorder),y,descendant of concept mapped from leaf +13963007,Repair of coronary arteriovenous chamber fistula (procedure),y,descendant of concept mapped from leaf +449350006,Pulmonary artery with absent proximal arterial connection (disorder),y,descendant of concept mapped from leaf +448161000,Aortic valve overriding ventricular septum (disorder),y,descendant of concept mapped from leaf +459165008,Systemic to pulmonary collateral artery from abdominal aorta (disorder),y,descendant of concept mapped from leaf +448328001,Aneurysm of aortic sinus of Valsalva without rupture (disorder),y,descendant of concept mapped from leaf +448079003,Vascular ring with right aortic arch and right patent arterial duct with absent left pulmonary artery (disorder),y,descendant of concept mapped from leaf +736970002,Allograft bypass of four or more coronary arteries (procedure),y,descendant of concept mapped from leaf +448946000,Anterior-posterior orientation of bicuspid pulmonary valve (disorder),y,descendant of concept mapped from leaf +448630005,Vascular ring with left aortic arch and right patent arterial duct (disorder),y,descendant of concept mapped from leaf +470753008,Progression of fetal left ventricular outflow tract obstruction (disorder),y,descendant of concept mapped from leaf +443389008,Repair of total anomalous pulmonary venous connection of intracardiac type (procedure),y,descendant of concept mapped from leaf +448087002,Atresia of pulmonary trunk with absent right pulmonary artery (disorder),y,descendant of concept mapped from leaf +80479009,Acute right-sided congestive heart failure (disorder),y,descendant of concept mapped from leaf +736965009,Bypass of two coronary arteries with prosthesis (procedure),y,descendant of concept mapped from leaf +448082008,Right ventricular outflow tract obstruction due to prolapse of Eustachian valve (disorder),y,descendant of concept mapped from leaf +447683000,Discontinuity between mitral valve and pulmonary valve (disorder),y,descendant of concept mapped from leaf +413439005,Acute ischemic heart disease (disorder),y,descendant of concept mapped from leaf +384680006,Patch enlargement of coronary artery (procedure),y,descendant of concept mapped from leaf +1082601000119104,Ascites due to alcoholic cirrhosis (disorder),y,descendant of concept mapped from leaf +233601000000100,Aortic root replacement using pulmonary valve autograft with right ventricle to pulmonary artery valved conduit and aortoventriculoplasty (procedure),y,descendant of concept mapped from leaf +449537006,Atrioventricular septal defect with atrioventricular valve regurgitation through right anterosuperior inferior mural commissure (disorder),y,descendant of concept mapped from leaf +444354004,Repair of total anomalous pulmonary venous connection to right atrium by atrial septum translocation (procedure),y,descendant of concept mapped from leaf +93247001,Congenital hypoplasia of cardiac ventricle (disorder),y,descendant of concept mapped from leaf +253371000,Atrial septal defect through coronary sinus orifice (disorder),y,descendant of concept mapped from leaf +721976003,Lung agenesis with heart defect and thumb anomaly syndrome (disorder),y,descendant of concept mapped from leaf +43176009,Congenital hypoplasia of tricuspid valve (disorder),y,descendant of concept mapped from leaf +763835004,Oro-facial digital syndrome type 13 (disorder),y,descendant of concept mapped from leaf +11433004,Congenital coronary artery fistula (disorder),y,descendant of concept mapped from leaf +109379000,Traumatic interventricular septal defect (disorder),y,descendant of concept mapped from leaf +447827003,Partial anomalous pulmonary venous connection of entire right lung (disorder),y,descendant of concept mapped from leaf +93234006,Congenital hypertrophy of mitral valve (disorder),y,descendant of concept mapped from leaf +447283008,Solitary ventricle of indeterminate morphology (disorder),y,descendant of concept mapped from leaf +443253003,Acute on chronic systolic heart failure (disorder),y,descendant of concept mapped from leaf +449596004,Divided left atrium with some pulmonary veins to proximal chamber draining to right atrium and others connecting directly to left atrium (disorder),y,descendant of concept mapped from leaf +763066009,"Atrioventricular septal defect, blepharophimosis, radial and anal defect syndrome (disorder)",y,descendant of concept mapped from leaf +458039003,Anomalous origin of left circumflex coronary artery from pulmonary artery (disorder),y,descendant of concept mapped from leaf +447690005,Prolapse of Eustachian valve through tricuspid valve (disorder),y,descendant of concept mapped from leaf +7991000119102,Congenital dilatation of aortic root (disorder),y,descendant of concept mapped from leaf +446909006,Midline apex of heart (disorder),y,descendant of concept mapped from leaf +39724006,"Anastomosis of internal mammary artery to coronary artery, double vessel (procedure)",y,descendant of concept mapped from leaf +459181003,Aneurysm of patch of ventricular septal defect (disorder),y,descendant of concept mapped from leaf +445002005,Atrioventricular septal defect with separate atrioventricular orifices (disorder),y,descendant of concept mapped from leaf +447773008,Proximal aortopulmonary window with minimal inferior rim (disorder),y,descendant of concept mapped from leaf +445298006,Aortic orifice anterior with respect to pulmonary orifice (disorder),y,descendant of concept mapped from leaf +92976003,Congenital absence of tricuspid valve (disorder),y,descendant of concept mapped from leaf +130541000119100,History of placement of stent in coronary artery bypass graft (situation),y,descendant of concept mapped from leaf +703210007,Subsequent ST segment elevation myocardial infarction of anterior wall (disorder),y,descendant of concept mapped from leaf +447318008,Obstructed pulmonary venous connection at interatrial communication (disorder),y,descendant of concept mapped from leaf +398716006,Endomyocardial fibrosis (disorder),y,descendant of concept mapped from leaf +250999000,Rheumatic mitral valve leaflet changes (disorder),y,descendant of concept mapped from leaf +447933008,Nonfenestrated interatrial communication within oval fossa (disorder),y,descendant of concept mapped from leaf +96711000119105,Hypertensive heart AND chronic kidney disease stage 5 (disorder),y,descendant of concept mapped from leaf +33006007,Restrictive cardiomyopathy secondary to endocardial fibroelastosis (disorder),y,descendant of concept mapped from leaf +449015009,Hepatic vein to right sided atrium (disorder),y,descendant of concept mapped from leaf +162970000,On examination - pulmonary edema (disorder),y,descendant of concept mapped from leaf +448681000,Indeterminate atrial arrangement (disorder),y,descendant of concept mapped from leaf +46165000,Chronic rheumatic endocarditis (disorder),y,descendant of concept mapped from leaf +69609002,Nonobstructive cardiomyopathy (disorder),y,descendant of concept mapped from leaf +253358003,Left atrial appendage aneurysm (disorder),y,descendant of concept mapped from leaf +703245004,Acquired stenosis of right pulmonary artery (disorder),y,descendant of concept mapped from leaf +41049003,Holoacardius amorphus (disorder),y,descendant of concept mapped from leaf +371804009,Left main coronary artery disease (disorder),y,descendant of concept mapped from leaf +471299004,Anomalous origin of single coronary artery from aortic sinus to right of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +461104009,Interruption of coronary artery (disorder),y,descendant of concept mapped from leaf +448086006,Atresia of pulmonary trunk with absent left pulmonary artery (disorder),y,descendant of concept mapped from leaf +448308000,Right ventricular outflow tract obstruction due to common atrioventricular valve (disorder),y,descendant of concept mapped from leaf +15713041000119103,Acute ST segment elevation myocardial infarction of posterior wall (disorder),y,descendant of concept mapped from leaf +46939000,Keshan disease (disorder),y,descendant of concept mapped from leaf +715626008,Tropical endomyocardial fibrosis (disorder),y,descendant of concept mapped from leaf +39589002,Hypoplasia of right heart (disorder),y,descendant of concept mapped from leaf +725027004,Muscle and heart glycogen synthase deficiency (disorder),y,descendant of concept mapped from leaf +759551000000105,Atrioventricular septal defect with balanced ventricles (disorder),y,descendant of concept mapped from leaf +460312001,Systemic to pulmonary collateral artery from left carotid artery (disorder),y,descendant of concept mapped from leaf +717840005,Congestive heart failure stage B (disorder),y,descendant of concept mapped from leaf +470757009,Tense ascites (disorder),y,descendant of concept mapped from leaf +736971003,Allograft bypass of one coronary artery (procedure),y,descendant of concept mapped from leaf +108421000119102,Mural thrombus of left ventricle (disorder),y,descendant of concept mapped from leaf +91604001,Dilated cardiomyopathy secondary to polyarteritis nodosa (disorder),y,descendant of concept mapped from leaf +109432004,Anomalous cardiac muscle bands (disorder),y,descendant of concept mapped from leaf +707372009,Congenital stenosis of right pulmonary artery (disorder),y,descendant of concept mapped from leaf +445435009,Apex of heart posterior to cardiac base (disorder),y,descendant of concept mapped from leaf +92963009,Congenital absence of chordae tendineae (disorder),y,descendant of concept mapped from leaf +461376004,Congenital hypoplasia of thoracoabdominal aorta (disorder),y,descendant of concept mapped from leaf +90205004,Cardiac revascularization with bypass anastomosis (procedure),y,descendant of concept mapped from leaf +14323007,Aortocoronary bypass of three coronary arteries (procedure),y,descendant of concept mapped from leaf +415509000,Secondary restrictive cardiomyopathy (disorder),y,descendant of concept mapped from leaf +449511008,Imperforate left ventriculoarterial valve (disorder),y,descendant of concept mapped from leaf +447528003,Obstructed pulmonary venous connection due to extrinsic compression at diaphragm (disorder),y,descendant of concept mapped from leaf +94702005,Multiple congenital cardiac defects (disorder),y,descendant of concept mapped from leaf +472103001,Interruption of aortic arch between left common carotid artery and right common carotid artery (disorder),y,descendant of concept mapped from leaf +445001003,Left ventricular outflow tract obstruction due to malaligned outlet septum (disorder),y,descendant of concept mapped from leaf +445898001,Abnormal atrial arrangement (disorder),y,descendant of concept mapped from leaf +286071000119109,Congenital peripheral pulmonary artery stenosis (disorder),y,descendant of concept mapped from leaf +65861005,Excision of aneurysm of coronary artery (procedure),y,descendant of concept mapped from leaf +443379009,Functional single ventricle (disorder),y,descendant of concept mapped from leaf +59062007,Coronary stricture (disorder),y,descendant of concept mapped from leaf +764955006,Laubry Pezzi syndrome (disorder),y,descendant of concept mapped from leaf +232733007,Exploration of coronary artery with arteriotomy (procedure),y,descendant of concept mapped from leaf +19036004,Rheumatic heart valve stenosis (disorder),y,descendant of concept mapped from leaf +473393007,Congenital occlusion of coronary sinus (disorder),y,descendant of concept mapped from leaf +448118003,Atrioventricular septal defect with atrial and ventricular components and separate atrioventricular valves (disorder),y,descendant of concept mapped from leaf +62207008,Syphilitic ostial coronary disease (disorder),y,descendant of concept mapped from leaf +716740009,Potter sequence cleft lip and palate cardiopathy syndrome (disorder),y,descendant of concept mapped from leaf +15713121000119105,Acute ST segment elevation myocardial infarction due to right coronary artery occlusion (disorder),y,descendant of concept mapped from leaf +448116004,Aneurysm of aortic sinus of Valsalva with protrusion into left ventricle (disorder),y,descendant of concept mapped from leaf +448356006,Coronary sinus drainage cephalad to right superior vena cava (disorder),y,descendant of concept mapped from leaf +428501002,Replacement of aortic root using pulmonary valve autograft with right ventricle to pulmonary artery valved conduit (procedure),y,descendant of concept mapped from leaf +418551006,Laparoscopic coronary artery bypass using robotic assistance (procedure),y,descendant of concept mapped from leaf +448744007,Aneurysm of aortic sinus of Valsalva with rupture to pulmonary artery (disorder),y,descendant of concept mapped from leaf +78031003,Rheumatic aortic regurgitation (disorder),y,descendant of concept mapped from leaf +721014007,Heart-hand syndrome Slovenian type (disorder),y,descendant of concept mapped from leaf +759741000000103,Anomalous false tendon of muscle bands of left ventricle (disorder),y,descendant of concept mapped from leaf +718216009,Partial defect of atrioventricular canal (disorder),y,descendant of concept mapped from leaf +11468004,Postoperative pulmonary edema (disorder),y,descendant of concept mapped from leaf +461592008,Congenital luminal atresia of aortic arch between subclavian artery and common carotid artery (disorder),y,descendant of concept mapped from leaf +445235006,Left ventricular outflow tract obstruction due to anterolateral muscle band (disorder),y,descendant of concept mapped from leaf +82523003,Congestive rheumatic heart failure (disorder),y,descendant of concept mapped from leaf +17531000119105,Acute myocardial infarction due to left coronary artery occlusion (disorder),y,descendant of concept mapped from leaf +93237004,Congenital hypoplasia of aortic valve (disorder),y,descendant of concept mapped from leaf +715535009,Keratosis palmoplantaris and arrhythmogenic cardiomyopathy syndrome (disorder),y,descendant of concept mapped from leaf +448966009,Hypoplasia of trabecular portion of right ventricle (disorder),y,descendant of concept mapped from leaf +21234008,Congenital stenosis of aorta (disorder),y,descendant of concept mapped from leaf +736967001,Aortocoronary artery bypass of one coronary artery with saphenous vein graft (procedure),y,descendant of concept mapped from leaf +767311002,Double aortic arch with dominant right arch and hypoplasia of left arch (disorder),y,descendant of concept mapped from leaf +445336009,Hypertrophic cardiomyopathy associated with another disorder (disorder),y,descendant of concept mapped from leaf +449456004,Atrioventricular septal defect with atrioventricular valve regurgitation through left septal commissure (disorder),y,descendant of concept mapped from leaf +448721009,Abnormal course of aortic arch and descending aorta (disorder),y,descendant of concept mapped from leaf +93064005,Congenital duplication of aorta (disorder),y,descendant of concept mapped from leaf +447696004,Unicommissural unicuspid aortic valve (disorder),y,descendant of concept mapped from leaf +449086000,Ebstein's anomaly of left atrioventricular valve in functionally univentricular heart (disorder),y,descendant of concept mapped from leaf +163311005,On examination - ascites - dipping shown (disorder),y,descendant of concept mapped from leaf +448059006,Pulmonary trunk absent with absent left pulmonary artery (disorder),y,descendant of concept mapped from leaf +10326007,"Coronary artery bypass with autogenous graft, three grafts (procedure)",y,descendant of concept mapped from leaf +449025004,Vascular ring with left aortic arch and right arterial duct ligament arising from retroesophageal aortic diverticulum with aberrant right subclavian artery (disorder),y,descendant of concept mapped from leaf +448183001,Atrioventricular septal defect with ventricular component and interchordal shunting under superior bridging leaflet (disorder),y,descendant of concept mapped from leaf +10757441000119102,Pre-existing hypertensive heart disease in mother complicating childbirth (disorder),y,descendant of concept mapped from leaf +312591002,Acute rheumatic heart disease (disorder),y,descendant of concept mapped from leaf +759781000000106,Subpulmonary left ventricular outflow tract obstruction (disorder),y,descendant of concept mapped from leaf +449398002,Aortico-left ventricular tunnel with intracardiac aneurysm of septal portion (disorder),y,descendant of concept mapped from leaf +93305002,Congenital malposition of aorta (disorder),y,descendant of concept mapped from leaf +444217005,Repair of total anomalous pulmonary venous connection by coronary sinus cutback to oval fossa with direct anastomosis of pulmonary venous confluence to left atrium (procedure),y,descendant of concept mapped from leaf +53043001,Primary idiopathic dilated cardiomyopathy (disorder),y,descendant of concept mapped from leaf +445003000,Left ventricular outflow tract obstruction due to subpulmonary fibromuscular shelf (disorder),y,descendant of concept mapped from leaf +461385004,Anomalous course of coronary artery through infundibular septum (disorder),y,descendant of concept mapped from leaf +447664007,Partial anomalous pulmonary venous connection of part of left lung (disorder),y,descendant of concept mapped from leaf +8239009,Primary endocardial fibroelastosis (disorder),y,descendant of concept mapped from leaf +471301006,Acquired excessive restriction of interatrial communication (disorder),y,descendant of concept mapped from leaf +36665001,Atrial aneurysm (disorder),y,descendant of concept mapped from leaf +460937001,Anomalous origin of single coronary artery from right coronary artery aortic sinus (disorder),y,descendant of concept mapped from leaf +445286001,Aortic sinus of Valsalva aneurysm from right coronary sinus (disorder),y,descendant of concept mapped from leaf +724208006,Keutel syndrome (disorder),y,descendant of concept mapped from leaf +718181001,Congenital cardiac diverticulum (disorder),y,descendant of concept mapped from leaf +703213009,Acute ST segment elevation myocardial infarction of inferior wall (disorder),y,descendant of concept mapped from leaf +85284003,"Angina, class III (disorder)",y,descendant of concept mapped from leaf +78485007,Acyanotic congenital heart disease (disorder),y,descendant of concept mapped from leaf +26942004,Destructive procedure of coronary artery (procedure),y,descendant of concept mapped from leaf +449005003,Absence of mitral chordae tendinae (disorder),y,descendant of concept mapped from leaf +472703008,Pseudoacardia (disorder),y,descendant of concept mapped from leaf +472786003,Right ventricular outflow tract obstruction due to foreign body (disorder),y,descendant of concept mapped from leaf +449125001,Congenital stenosis of pulmonary artery (disorder),y,descendant of concept mapped from leaf +426856002,Ischemic congestive cardiomyopathy (disorder),y,descendant of concept mapped from leaf +445373007,Aortic orifice posterior with respect to pulmonary orifice (disorder),y,descendant of concept mapped from leaf +62820003,"Correction of tetralogy of Fallot, one-stage (procedure)",y,descendant of concept mapped from leaf +445650008,Aortic orifice anterior left with respect to pulmonary orifice (disorder),y,descendant of concept mapped from leaf +447780005,Restrictive interatrial communication with obligatory shunt (disorder),y,descendant of concept mapped from leaf +697976003,Microvascular ischemia of myocardium (disorder),y,descendant of concept mapped from leaf +448080000,Single ventricular outlet above ventricle of indeterminate morphology (disorder),y,descendant of concept mapped from leaf +96701000119107,Hypertensive heart AND chronic kidney disease on dialysis (disorder),y,descendant of concept mapped from leaf +449441008,Divided left atrium with all pulmonary veins to proximal chamber without communication to left atrium with pulmonary venous chamber communication to right atrium (disorder),y,descendant of concept mapped from leaf +735580003,Recurrent interatrial communication following procedure (disorder),y,descendant of concept mapped from leaf +462172006,Fetal heart failure (disorder),y,descendant of concept mapped from leaf +153931000119109,Acute combined systolic and diastolic heart failure (disorder),y,descendant of concept mapped from leaf +460930004,Anomalous origin of left coronary artery from right coronary aortic sinus (disorder),y,descendant of concept mapped from leaf +92888002,Congenital abnormal shape of aortic valve (disorder),y,descendant of concept mapped from leaf +253679008,Abdominal aortic coarctation (disorder),y,descendant of concept mapped from leaf +39041004,Restrictive cardiomyopathy secondary to sarcoidosis (disorder),y,descendant of concept mapped from leaf +721013001,Heart-hand syndrome type 3 (disorder),y,descendant of concept mapped from leaf +459065005,Congenital atresia of left main stem coronary artery (disorder),y,descendant of concept mapped from leaf +713689002,Repair of coronary artery (procedure),y,descendant of concept mapped from leaf +763725002,Percutaneous transluminal angioplasty of coronary artery using drug eluting balloon catheter (procedure),y,descendant of concept mapped from leaf +759851000000108,Subpulmonary right ventricular outflow tract obstruction (disorder),y,descendant of concept mapped from leaf +719272007,Progressive sensorineural hearing loss and hypertrophic cardiomyopathy syndrome (disorder),y,descendant of concept mapped from leaf +233707008,High altitude pulmonary edema (disorder),y,descendant of concept mapped from leaf +703211006,Subsequent ST segment elevation myocardial infarction (disorder),y,descendant of concept mapped from leaf +726571000000105,Absent right sided atrioventricular connection with straddling valve (disorder),y,descendant of concept mapped from leaf +460471001,Anomalous origin of conus artery from separate aortic sinus orifice (disorder),y,descendant of concept mapped from leaf +719380003,Microcephalus cardiomyopathy syndrome (disorder),y,descendant of concept mapped from leaf +74371005,"Coronary artery bypass with autogenous graft, two grafts (procedure)",y,descendant of concept mapped from leaf +447274003,Obstructed pulmonary venous connection due to intrinsic narrowing (disorder),y,descendant of concept mapped from leaf +719395001,Microcephalus facio-cardio-skeletal syndrome Hadziselimovic type (disorder),y,descendant of concept mapped from leaf +444176000,Repair of total anomalous pulmonary venous connection by unroofing and closure of coronary sinus and interatrial communication (procedure),y,descendant of concept mapped from leaf +253519009,Hypoplasia of right ventricular inflow tract (disorder),y,descendant of concept mapped from leaf +78609007,Chronic peritoneal effusion (disorder),y,descendant of concept mapped from leaf +139011000119104,Coronary arteriosclerosis following coronary artery bypass graft (disorder),y,descendant of concept mapped from leaf +21430002,Dilated cardiomyopathy secondary to rheumatoid arthritis (disorder),y,descendant of concept mapped from leaf +26170003,Urine ascites (disorder),y,descendant of concept mapped from leaf +4501007,Tuberculous ascites (disorder),y,descendant of concept mapped from leaf +10365005,Right main coronary artery thrombosis (disorder),y,descendant of concept mapped from leaf +728391000000103,Divided left atrium with all pulmonary veins to proximal chamber draining to left atrium with pulmonary venous chamber communication to right atrium (disorder),y,descendant of concept mapped from leaf +28869005,Dilated cardiomyopathy secondary to muscular dystrophy (disorder),y,descendant of concept mapped from leaf +703244000,Acquired stenosis of left pulmonary artery (disorder),y,descendant of concept mapped from leaf +123658006,Congenital cleft of cardiac valve (disorder),y,descendant of concept mapped from leaf +443330001,Repair of total anomalous pulmonary venous connection by coronary sinus cutback to oval fossa with insertion of interatrial baffle (procedure),y,descendant of concept mapped from leaf +53322007,Hypertrophic cardiomyopathy secondary to Friedreich's ataxia (disorder),y,descendant of concept mapped from leaf +83898004,Rheumatic disease of mitral valve (disorder),y,descendant of concept mapped from leaf +461366002,Congenital hypoplasia of descending aorta (disorder),y,descendant of concept mapped from leaf +448887003,Common arterial trunk with isolated pulmonary artery (disorder),y,descendant of concept mapped from leaf +405752007,Congenital atrial septal defect (disorder),y,descendant of concept mapped from leaf +447919008,Univentricular atrioventricular connection with absent right sided atrioventricular connection (disorder),y,descendant of concept mapped from leaf +52757001,Congenital supravalvular pulmonary stenosis (disorder),y,descendant of concept mapped from leaf +715987000,Congenital heart defect with round face and developmental delay syndrome (disorder),y,descendant of concept mapped from leaf +163313008,On examination - ascites-shifting dullness (disorder),y,descendant of concept mapped from leaf +449593007,Divided left atrium with some pulmonary veins to proximal chamber draining to left atrium and others connecting directly to left atrium (disorder),y,descendant of concept mapped from leaf +448162007,Bipartite right ventricle (disorder),y,descendant of concept mapped from leaf +449016005,Hepatic vein to left atrium and right atrium (disorder),y,descendant of concept mapped from leaf +763280005,"Encephalopathy, hypertrophic cardiomyopathy, renal tubular disease syndrome (disorder)",y,descendant of concept mapped from leaf +461109004,Anomalous course of coronary artery anterior to pulmonary trunk and aorta (disorder),y,descendant of concept mapped from leaf +762460002,Hemodynamically insignificant ventricular septal defect (disorder),y,descendant of concept mapped from leaf +23311000119105,Acute myocardial infarction due to right coronary artery occlusion (disorder),y,descendant of concept mapped from leaf +11104006,Dilated cardiomyopathy secondary to Refsum's disease (disorder),y,descendant of concept mapped from leaf +59554006,Holoacardius acormus (disorder),y,descendant of concept mapped from leaf +34126003,Rheumatic pulmonary valve insufficiency (disorder),y,descendant of concept mapped from leaf +449158005,Ebstein's anomaly of tricuspid valve with atrialization of right ventricular chamber (disorder),y,descendant of concept mapped from leaf +128558004,Congenital coronary artery fistula to right ventricle (disorder),y,descendant of concept mapped from leaf +461421007,Anomalous coronary artery without acute angulation of less than 45 degrees relative to aorta (disorder),y,descendant of concept mapped from leaf +79439001,Congenital anomaly of aortic arch (disorder),y,descendant of concept mapped from leaf +461414007,Acquired subaortic aneurysm of left ventricle (disorder),y,descendant of concept mapped from leaf +93078006,Congenital hypertrophy of cardiac ventricle (disorder),y,descendant of concept mapped from leaf +460581004,Anomalous origin of accessory coronary artery from aortic sinus (disorder),y,descendant of concept mapped from leaf +718681002,Oro-facial digital syndrome type 11 (disorder),y,descendant of concept mapped from leaf +71346006,Augmentation of outflow tract in total repair of tetralogy of Fallot (procedure),y,descendant of concept mapped from leaf +724066002,Polysyndactyly and cardiac malformation syndrome (disorder),y,descendant of concept mapped from leaf +448472004,Congenital abnormality of pulmonary trunk (disorder),y,descendant of concept mapped from leaf +53067009,Pancreatic ascites (disorder),y,descendant of concept mapped from leaf +471297002,Anomalous origin of single coronary artery from nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +449589001,Single stenosis of right pulmonary artery (disorder),y,descendant of concept mapped from leaf +371810009,Recurrent angina status post coronary artery bypass graft (disorder),y,descendant of concept mapped from leaf +93053007,Congenital dilatation of cardiac ventricle (disorder),y,descendant of concept mapped from leaf +17759006,Rheumatic aortic stenosis with regurgitation (disorder),y,descendant of concept mapped from leaf +448182006,Atrioventricular septal defect with ventricular component and interchordal shunting under inferior bridging leaflet (disorder),y,descendant of concept mapped from leaf +123656005,Congenital atresia of cardiac valve (disorder),y,descendant of concept mapped from leaf +13839000,Bernheim's syndrome (disorder),y,descendant of concept mapped from leaf +28381002,Rheumatic pericarditis (disorder),y,descendant of concept mapped from leaf +791000119109,Angina associated with type II diabetes mellitus (disorder),y,descendant of concept mapped from leaf +724173009,Maternally inherited cardiomyopathy and hearing loss syndrome (disorder),y,descendant of concept mapped from leaf +448746009,Aneurysm of aortic sinus of Valsalva with rupture to right ventricle (disorder),y,descendant of concept mapped from leaf +445208002,Congenital hypoplasia of right pulmonary artery (disorder),y,descendant of concept mapped from leaf +15712921000119103,Acute ST segment elevation myocardial infarction of lateral wall (disorder),y,descendant of concept mapped from leaf +233123004,Intraventricular operation for transposition or double outlet ventricle (procedure),y,descendant of concept mapped from leaf +460438000,Anomalous origin of large conus artery from right coronary artery (disorder),y,descendant of concept mapped from leaf +703356002,Coronary artery occlusion due to neoplastic disease (disorder),y,descendant of concept mapped from leaf +449110001,Congenital billowing of mitral valve leaflet (disorder),y,descendant of concept mapped from leaf +472317002,Histiocytoid mitochondrial cardiomyopathy (disorder),y,descendant of concept mapped from leaf +460589002,Vascular ring with right aortic arch and left ligamentum arteriosum between left subclavian artery and left common carotid artery (disorder),y,descendant of concept mapped from leaf +445453003,Left ventricular outflow tract obstruction due to aneurysm of membranous septum (disorder),y,descendant of concept mapped from leaf +472323007,Fetal cardiomyopathy (disorder),y,descendant of concept mapped from leaf +449124002,Eccentric opening of tricuspid pulmonary valve (disorder),y,descendant of concept mapped from leaf +41334000,"Angina, class II (disorder)",y,descendant of concept mapped from leaf +233125006,Construction of intraventricular left ventricle to aorta spiral tunnel (procedure),y,descendant of concept mapped from leaf +15676002,Acute rheumatic pericarditis (disorder),y,descendant of concept mapped from leaf +276637009,Hemorrhagic pulmonary edema (disorder),y,descendant of concept mapped from leaf +74034002,Isolated dextrocardia (disorder),y,descendant of concept mapped from leaf +72011007,Rheumatic aortic stenosis (disorder),y,descendant of concept mapped from leaf +448332007,Left superior vena cava persisting to right sided atrium (disorder),y,descendant of concept mapped from leaf +195137008,Acquired cardiac septal defect (disorder),y,descendant of concept mapped from leaf +1085021000119106,Hepatic ascites due to chronic alcoholic hepatitis (disorder),y,descendant of concept mapped from leaf +47058000,Heart transplant with recipient cardiectomy (procedure),y,descendant of concept mapped from leaf +429559004,Typical angina (disorder),y,descendant of concept mapped from leaf +471846004,Cardiomyopathy due to neuromuscular disorder (disorder),y,descendant of concept mapped from leaf +399216004,D - transposition of the great vessels (disorder),y,descendant of concept mapped from leaf +450313008,Coarctation of aorta between left common carotid artery and right common carotid artery (disorder),y,descendant of concept mapped from leaf +1321241000000105,Cardiomyopathy caused by severe acute respiratory syndrome coronavirus 2 (disorder),y,descendant of concept mapped from leaf +16855001,Rheumatic tricuspid valve failure (disorder),y,descendant of concept mapped from leaf +67431000119105,Congestive heart failure stage D (disorder),y,descendant of concept mapped from leaf +68800008,Creation of conduit of right ventricle and pulmonary artery in repair of transposition of great vessels (procedure),y,descendant of concept mapped from leaf +45669002,Cardio-omentopexy (procedure),y,descendant of concept mapped from leaf +448724001,Aneurysm of aortic sinus of Valsalva with rupture to left ventricle (disorder),y,descendant of concept mapped from leaf +429620002,Construction of left ventricle to aorta tunnel with right ventricle to pulmonary artery valved conduit (procedure),y,descendant of concept mapped from leaf +447929001,Double aortic arch with left arch dominant (disorder),y,descendant of concept mapped from leaf +5375005,Chronic left-sided congestive heart failure (disorder),y,descendant of concept mapped from leaf +253730009,Balanced coronary system (disorder),y,descendant of concept mapped from leaf +49102001,Hypertensive heart AND renal disease in obstetric context (disorder),y,descendant of concept mapped from leaf +448309008,Right ventricular outflow tract obstruction due to fibromuscular shelf (disorder),y,descendant of concept mapped from leaf +448280008,Malalignment of aortic sinus in relation to pulmonary sinus (disorder),y,descendant of concept mapped from leaf +471277007,Single right coronary artery supplying all of heart with usual distribution of left coronary artery derived from distal right coronary artery (disorder),y,descendant of concept mapped from leaf +360465008,Idiopathic hypertrophic subaortic stenosis (disorder),y,descendant of concept mapped from leaf +82522008,Ischemic contracture of left ventricle syndrome (disorder),y,descendant of concept mapped from leaf +447999009,Single ventricular outlet above left ventricle (disorder),y,descendant of concept mapped from leaf +24584003,Restrictive cardiomyopathy secondary to malignancy (disorder),y,descendant of concept mapped from leaf +461413001,Acquired submitral aneurysm of left ventricle (disorder),y,descendant of concept mapped from leaf +67696008,Rheumatic tricuspid valve regurgitation (disorder),y,descendant of concept mapped from leaf +728491000000107,Restrictive interatrial communication septal defect (disorder),y,descendant of concept mapped from leaf +460524009,Anomalous origin of right coronary artery from left anterior descending coronary artery (disorder),y,descendant of concept mapped from leaf +359617009,Acute right-sided heart failure (disorder),y,descendant of concept mapped from leaf +93347003,Congenital malposition of pulmonary artery (disorder),y,descendant of concept mapped from leaf +471280008,Recurrent ventricular component of atrioventricular septal defect after prior cardiovascular surgical procedure (disorder),y,descendant of concept mapped from leaf +759891000000100,Two chambered right ventricle with ventricular septal defect above and below obstruction (disorder),y,descendant of concept mapped from leaf +397431004,"Percutaneous transluminal coronary angioplasty with rotoablation, single vessel (procedure)",y,descendant of concept mapped from leaf +471274000,Systemic to pulmonary collateral artery contributing to dual lung supply (disorder),y,descendant of concept mapped from leaf +718135001,Isolated right ventricular hypoplasia (disorder),y,descendant of concept mapped from leaf +93069000,Congenital hypertrophy of aortic valve (disorder),y,descendant of concept mapped from leaf +74908007,Congenital absence of inferior vena cava (disorder),y,descendant of concept mapped from leaf +233712009,Fluid overload pulmonary edema (disorder),y,descendant of concept mapped from leaf +472785004,Right ventricular outflow tract obstruction due to neoplasm (disorder),y,descendant of concept mapped from leaf +447903001,Coarctation of right pulmonary artery (disorder),y,descendant of concept mapped from leaf +461000119108,History of myocardial infarction in last eight weeks (situation),y,descendant of concept mapped from leaf +1082611000119101,Ascites due to alcoholic hepatitis (disorder),y,descendant of concept mapped from leaf +44088000,Low cardiac output syndrome (disorder),y,descendant of concept mapped from leaf +445436005,Left superior caval vein persisting to left sided atrium (disorder),y,descendant of concept mapped from leaf +234106000,Bancroftian filarial chylous ascites (disorder),y,descendant of concept mapped from leaf +83130006,Eisenmenger's defect (disorder),y,descendant of concept mapped from leaf +410065004,Congenital anomaly of aortic arch AND/OR descending aorta (disorder),y,descendant of concept mapped from leaf +448027004,Supravalvar pulmonary trunk stenosis (disorder),y,descendant of concept mapped from leaf +67166004,Aortocoronary artery bypass graft (procedure),y,descendant of concept mapped from leaf +405276000,Negative pressure pulmonary edema (disorder),y,descendant of concept mapped from leaf +119772003,Coronary artery closure (procedure),y,descendant of concept mapped from leaf +703519007,Repair of double outlet right ventricle with anastomosis of left ventricle to aorta via ventricular septal defect and right ventricle to pulmonary trunk conduit (procedure),y,descendant of concept mapped from leaf +163312003,On examination - ascites-fluid thrill shown (disorder),y,descendant of concept mapped from leaf +460545002,Congenital atresia of right coronary artery orifice (disorder),y,descendant of concept mapped from leaf +720606005,Cardiocranial syndrome Pfeiffer type (disorder),y,descendant of concept mapped from leaf +448064005,Congenital abnormality of right atrium (disorder),y,descendant of concept mapped from leaf +60732002,"Atrial septal defect with endocardial cushion defect, partial type (disorder)",y,descendant of concept mapped from leaf +449539009,Atrioventricular septal defect with atrioventricular valve regurgitation through right inferior bridging leaflet inferior mural commissure (disorder),y,descendant of concept mapped from leaf +707477002,Stenosis of left pulmonary artery as complication of procedure (disorder),y,descendant of concept mapped from leaf +427919004,Coronary arteriosclerosis caused by radiation (disorder),y,descendant of concept mapped from leaf +96311000119109,Exacerbation of congestive heart failure (disorder),y,descendant of concept mapped from leaf +441481004,Chronic systolic heart failure (disorder),y,descendant of concept mapped from leaf +449430006,Double aortic arch with left arch dominant and right arch patent (disorder),y,descendant of concept mapped from leaf +18932005,Rastelli operation in repair of transposition of great vessels (procedure),y,descendant of concept mapped from leaf +461597002,Congenital luminal atresia of aortic arch between left common carotid artery and right common carotid artery (disorder),y,descendant of concept mapped from leaf +253697000,Isolation of branch of aortic arch (disorder),y,descendant of concept mapped from leaf +460582006,Anomalous origin of left coronary artery and right coronary artery from pulmonary artery (disorder),y,descendant of concept mapped from leaf +461382001,Anomalous intramural course of proximal portion of coronary artery across commissure of aortic valve (disorder),y,descendant of concept mapped from leaf +419097006,Danon disease (disorder),y,descendant of concept mapped from leaf +445351000,Isolation of right subclavian artery (disorder),y,descendant of concept mapped from leaf +450301003,Anomalous origin of left coronary artery from pulmonary artery (disorder),y,descendant of concept mapped from leaf +35719004,Dilated cardiomyopathy secondary to scleroderma (disorder),y,descendant of concept mapped from leaf +461567005,Atresia of aortic arch with fibrous cord distal to subclavian artery (disorder),y,descendant of concept mapped from leaf +448876006,Subarterial ventricular septal defect (disorder),y,descendant of concept mapped from leaf +91529004,Rheumatic heart valve failure (disorder),y,descendant of concept mapped from leaf +722919003,Neonatal cardiac failure due to decreased left ventricular output (disorder),y,descendant of concept mapped from leaf +8876004,Aortocoronary artery bypass graft with prosthesis (procedure),y,descendant of concept mapped from leaf +729581004,Entire heart internal mammary artery implant (body structure),y,descendant of concept mapped from leaf +58911001,Dilated cardiomyopathy secondary to glycogen storage disease (disorder),y,descendant of concept mapped from leaf +698592004,Asymptomatic left ventricular systolic dysfunction (disorder),y,descendant of concept mapped from leaf +448081001,Hepatic vein to coronary sinus (disorder),y,descendant of concept mapped from leaf +41514002,Congenital supravalvular mitral stenosis (disorder),y,descendant of concept mapped from leaf +67399008,Ligation of anomalous coronary artery (procedure),y,descendant of concept mapped from leaf +728401000000100,Divided left atrium with all pulmonary veins to proximal chamber draining to left atrium with pulmonary venous chamber extracardiac communication (disorder),y,descendant of concept mapped from leaf +767309006,Double aortic arch with dominant left arch and hypoplasia of right arch (disorder),y,descendant of concept mapped from leaf +56309007,Congenital subaortic stenosis of tunnel type (disorder),y,descendant of concept mapped from leaf +700065003,Primary hypertrophic cardiomyopathy (disorder),y,descendant of concept mapped from leaf +52985009,Chylous ascites (disorder),y,descendant of concept mapped from leaf +449490008,Atrioventricular septal defect with atrioventricular valve regurgitation through right septal commissure (disorder),y,descendant of concept mapped from leaf +460591005,Vascular ring with right aortic arch and left ductus arteriosus from anomalous retroesophageal left subclavian artery (disorder),y,descendant of concept mapped from leaf +448628008,Vascular ring with left aortic arch and right arterial duct arising from retroesophageal aortic diverticulum and aberrant right subclavian artery (disorder),y,descendant of concept mapped from leaf +462174007,Fetal heart failure with myocardial hypertrophy (disorder),y,descendant of concept mapped from leaf +719456001,Cleft lip and cleft palate with intestinal malrotation and cardiopathy syndrome (disorder),y,descendant of concept mapped from leaf +448120000,Common arterial trunk with crossed over pulmonary arteries (disorder),y,descendant of concept mapped from leaf +5053004,Cardiac insufficiency due to prosthesis (disorder),y,descendant of concept mapped from leaf +727221000000107,Left superior vena cava persisting to coronary sinus and right atrium (disorder),y,descendant of concept mapped from leaf +15781000119107,Hypertensive heart AND chronic kidney disease with congestive heart failure (disorder),y,descendant of concept mapped from leaf +25559009,Congenital absence of left pulmonary artery (disorder),y,descendant of concept mapped from leaf +94150003,Membranous ventricular septum defect (disorder),y,descendant of concept mapped from leaf +77970009,Benign hypertensive heart disease without congestive heart failure (disorder),y,descendant of concept mapped from leaf +232974001,Orthotopic allotransplant of heart (procedure),y,descendant of concept mapped from leaf +460380002,Systemic to pulmonary collateral artery from right brachiocephalic artery (disorder),y,descendant of concept mapped from leaf +718128009,Congenital dysplasia of cardiac valve (disorder),y,descendant of concept mapped from leaf +22966008,Hypertensive heart AND renal disease complicating AND/OR reason for care during pregnancy (disorder),y,descendant of concept mapped from leaf +450312003,Coarctation of aorta between subclavian artery and common carotid artery (disorder),y,descendant of concept mapped from leaf +196152007,Pulmonary insufficiency following surgery (disorder),y,descendant of concept mapped from leaf +448478000,Systemic to pulmonary collateral artery from coronary artery (disorder),y,descendant of concept mapped from leaf +472102006,Interruption of aortic arch between subclavian artery and common carotid artery (disorder),y,descendant of concept mapped from leaf +93075009,Congenital hypertrophy of pulmonary valve (disorder),y,descendant of concept mapped from leaf +448790004,Anterior-posterior orientation of bicuspid aortic valve (disorder),y,descendant of concept mapped from leaf +96741000119109,Hypertensive heart AND chronic kidney disease stage 2 (disorder),y,descendant of concept mapped from leaf +445607003,Aortic orifice posterior left with respect to pulmonary orifice (disorder),y,descendant of concept mapped from leaf +109425008,Single right ventricle (disorder),y,descendant of concept mapped from leaf +18919000,Transplantation of coronary artery (procedure),y,descendant of concept mapped from leaf +449433008,Diffuse stenosis of left pulmonary artery (disorder),y,descendant of concept mapped from leaf +763615003,"Aortic arch anomaly, facial dysmorphism, intellectual disability syndrome (disorder)",y,descendant of concept mapped from leaf +448119006,Atrioventricular septal defect with atrioventricular valve regurgitation (disorder),y,descendant of concept mapped from leaf +473362006,Congenital stenosis of distal coronary artery (disorder),y,descendant of concept mapped from leaf +768552007,Congenital ventricular septal defect (disorder),y,descendant of concept mapped from leaf +128556000,Congenital coronary artery fistula to left ventricle (disorder),y,descendant of concept mapped from leaf +96721000119103,Hypertensive heart AND chronic kidney disease stage 4 (disorder),y,descendant of concept mapped from leaf +253577002,Ventricular septal aneurysm (disorder),y,descendant of concept mapped from leaf +92974000,Congenital absence of papillary muscle (disorder),y,descendant of concept mapped from leaf +448153005,Vascular ring with left aortic arch and right arterial duct arising from aberrant retroesophageal right subclavian artery (disorder),y,descendant of concept mapped from leaf +450315001,Vascular ring with right aortic arch and left ligamentum arteriosum (disorder),y,descendant of concept mapped from leaf +447901004,Aortopulmonary window with tubular connection (disorder),y,descendant of concept mapped from leaf +721073008,Short stature with webbed neck and congenital heart disease syndrome (disorder),y,descendant of concept mapped from leaf +715655000,Transthyretin related familial amyloid cardiomyopathy (disorder),y,descendant of concept mapped from leaf +724435004,Congenital anomaly of descending thoracic aorta (disorder),y,descendant of concept mapped from leaf +48872007,Rheumatic endocarditis (disorder),y,descendant of concept mapped from leaf +449098005,Congenital abnormality of left atrioventricular valve chordae tendinae in double inlet ventricle (disorder),y,descendant of concept mapped from leaf +17718000,Ostium primum defect (disorder),y,descendant of concept mapped from leaf +445268004,Apex of heart anterior to cardiac base (disorder),y,descendant of concept mapped from leaf +64615000,Restrictive cardiomyopathy secondary to glycogen storage disease (disorder),y,descendant of concept mapped from leaf +12238151000119107,Acute ST segment elevation myocardial infarction of inferoposterior wall (disorder),y,descendant of concept mapped from leaf +55546004,Anomalous origin of left circumflex artery from right coronary artery (disorder),y,descendant of concept mapped from leaf +447849009,Double aortic arch with right arch dominant and atresia of left arch (disorder),y,descendant of concept mapped from leaf +233709006,Toxic pulmonary edema (disorder),y,descendant of concept mapped from leaf +471885006,Hypertrophic cardiomyopathy with genetic marker (disorder),y,descendant of concept mapped from leaf +443765003,Repair of total anomalous pulmonary venous connection by creation of left neoatrium with pericardial roof (procedure),y,descendant of concept mapped from leaf +472769009,Excessive restriction of interatrial communication as complication of procedure (disorder),y,descendant of concept mapped from leaf +93051009,Congenital dilatation of atrium (disorder),y,descendant of concept mapped from leaf +449442001,Congenital abnormality of great cardiac vein (disorder),y,descendant of concept mapped from leaf +40532006,Dilated cardiomyopathy secondary to protozoal myocarditis (disorder),y,descendant of concept mapped from leaf +720748007,Aural atresia with multiple congenital anomalies and intellectual disability syndrome (disorder),y,descendant of concept mapped from leaf +421327009,Coronary artery stent thrombosis (disorder),y,descendant of concept mapped from leaf +460923005,Anomalous origin of right coronary artery from left coronary artery aortic sinus (disorder),y,descendant of concept mapped from leaf +447666009,Divided left atrium with all pulmonary veins to proximal chamber and then to left atrium (disorder),y,descendant of concept mapped from leaf +460586009,Anomalous origin of right coronary artery from left coronary artery (disorder),y,descendant of concept mapped from leaf +264467005,False tendon - heart (disorder),y,descendant of concept mapped from leaf +448115000,Aneurysm of aortic sinus of Valsalva with protrusion into left atrium (disorder),y,descendant of concept mapped from leaf +444851003,Bifid apex of heart (disorder),y,descendant of concept mapped from leaf +444961009,Atrioventricular septal defect with common atrioventricular orifice (disorder),y,descendant of concept mapped from leaf +762252001,Common arterial trunk with aortic dominance (disorder),y,descendant of concept mapped from leaf +720609003,Cardiomyopathy with cataract and hip spine disease syndrome (disorder),y,descendant of concept mapped from leaf +700458001,Pulmonary edema due to hypoproteinemia (disorder),y,descendant of concept mapped from leaf +1954004,Dilated cardiomyopathy secondary to toxic reaction (disorder),y,descendant of concept mapped from leaf +36079008,Double cardiac valve orifice (disorder),y,descendant of concept mapped from leaf +194750008,Rheumatic myocarditis (disorder),y,descendant of concept mapped from leaf +728381000000100,Divided left atrium with all pulmonary veins to proximal chamber draining to left atrium with pulmonary venous chamber communication (disorder),y,descendant of concept mapped from leaf +471289009,Anomalous origin of circumflex artery from aortic sinus to right of nonfacing aortic sinus and anomalous origin of left anterior descending coronary artery and right coronary artery from aortic sinus to left of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +471870000,Pacing-induced cardiomyopathy (disorder),y,descendant of concept mapped from leaf +307311001,Infected ascites (disorder),y,descendant of concept mapped from leaf +63402005,Meigs' syndrome (disorder),y,descendant of concept mapped from leaf +722095005,Acute kidney injury due to circulatory failure (disorder),y,descendant of concept mapped from leaf +92517006,Calcific coronary arteriosclerosis (disorder),y,descendant of concept mapped from leaf +450308009,Major systemic to pulmonary collateral artery supplying entire left lung (disorder),y,descendant of concept mapped from leaf +722027009,Kallman syndrome with heart disease (disorder),y,descendant of concept mapped from leaf +471298007,Anomalous origin of single coronary artery from aortic sinus to left of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +74561007,Kommerell's diverticulum (disorder),y,descendant of concept mapped from leaf +703275009,Heart failure with reduced ejection fraction due to cardiomyopathy (disorder),y,descendant of concept mapped from leaf +759751000000100,Anomalous posteromedial muscle bands of left ventricle (disorder),y,descendant of concept mapped from leaf +48431000,"Anastomosis of thoracic artery to coronary artery, single (procedure)",y,descendant of concept mapped from leaf +418824004,Off-pump coronary artery bypass (procedure),y,descendant of concept mapped from leaf +448103004,Right ventricle inferior to left ventricle (disorder),y,descendant of concept mapped from leaf +448415009,Subaortic stenosis due to common atrioventricular valve (disorder),y,descendant of concept mapped from leaf +764521002,Encircling double aortic arch (disorder),y,descendant of concept mapped from leaf +443296008,Repair of total anomalous pulmonary venous connection by interatrial baffle (procedure),y,descendant of concept mapped from leaf +109426009,Single left ventricle (disorder),y,descendant of concept mapped from leaf +449429001,Divided left atrium with some pulmonary veins to proximal chamber draining to right atrium (disorder),y,descendant of concept mapped from leaf +75409000,Implantation of outflow tract prosthesis in total repair of tetralogy of Fallot (procedure),y,descendant of concept mapped from leaf +703214003,Silent coronary vasospastic disease (disorder),y,descendant of concept mapped from leaf +471285003,Anomalous origin of coronary artery from aortic sinus to left of nonfacing aortic sinus (disorder),y,descendant of concept mapped from leaf +447852001,Ventricular septal defect of inlet of right aspect of ventricular septum (disorder),y,descendant of concept mapped from leaf +447289007,Criss-cross heart with leftward rotation (disorder),y,descendant of concept mapped from leaf +448842002,Aortico-left ventricular tunnel of simple type (disorder),y,descendant of concept mapped from leaf +54636000,Cardiomyopexy (procedure),y,descendant of concept mapped from leaf +28248000,Left anterior descending coronary artery thrombosis (disorder),y,descendant of concept mapped from leaf +93287006,Congenital hypoplasia of pulmonary valve (disorder),y,descendant of concept mapped from leaf +446890001,Obstructed pulmonary venous connection at coronary sinus orifice (disorder),y,descendant of concept mapped from leaf +713405002,Subacute ischemic heart disease (disorder),y,descendant of concept mapped from leaf +460583001,Anomalous origin of sinus node coronary artery from separate aortic sinus orifice (disorder),y,descendant of concept mapped from leaf +723333000,Faciocardiorenal syndrome (disorder),y,descendant of concept mapped from leaf +75761004,Infusion of intra-arterial thrombolytic agent with percutaneous transluminal coronary angioplasty (procedure),y,descendant of concept mapped from leaf +56941009,Restrictive cardiomyopathy secondary to hemochromatosis (disorder),y,descendant of concept mapped from leaf +703273002,Heart failure with reduced ejection fraction due to coronary artery disease (disorder),y,descendant of concept mapped from leaf +64862009,Congenital rhabdomyoma of heart (disorder),y,descendant of concept mapped from leaf +82247006,"Coronary artery bypass with autogenous graft, five grafts (procedure)",y,descendant of concept mapped from leaf +32912007,Thrombolysis of coronary artery by intravenous infusion (procedure),y,descendant of concept mapped from leaf +448184007,Atrioventricular septal defect with ventricular component and shunting under connecting tongue with separate orifices (disorder),y,descendant of concept mapped from leaf +263944006,Anterolateral muscle band (disorder),y,descendant of concept mapped from leaf +448723007,Aneurysm of aortic sinus of Valsalva with rupture to left atrium (disorder),y,descendant of concept mapped from leaf +448634001,Absent aortic valve cusp (disorder),y,descendant of concept mapped from leaf +448117008,Aneurysm of aortic sinus of Valsalva with protrusion into pericardial cavity (disorder),y,descendant of concept mapped from leaf +120861000119102,Systolic heart failure stage C (disorder),y,descendant of concept mapped from leaf +56276002,Left main coronary artery thrombosis (disorder),y,descendant of concept mapped from leaf +196153002,Pulmonary insufficiency following trauma (disorder),y,descendant of concept mapped from leaf +448477005,Superior to inferior ventricular relationship (disorder),y,descendant of concept mapped from leaf +449595000,Divided left atrium with some pulmonary veins to proximal chamber draining to right atrium and others connecting anomalously (disorder),y,descendant of concept mapped from leaf +448078006,Vascular ring with right aortic arch and right arterial ligament with absent left pulmonary artery (disorder),y,descendant of concept mapped from leaf +716773002,Familial idiopathic dilatation of right atrium (disorder),y,descendant of concept mapped from leaf +86466006,Rheumatic mitral stenosis (disorder),y,descendant of concept mapped from leaf +1086051000119107,Cardiomyopathy due to diphtheria infection (disorder),y,descendant of concept mapped from leaf +445270008,Aortic orifice left side by side with respect to pulmonary orifice (disorder),y,descendant of concept mapped from leaf +450309001,Major systemic to pulmonary collateral artery supplying part of right lung (disorder),y,descendant of concept mapped from leaf +461381008,Anomalous intramural course of proximal portion of coronary artery within aortic sinus (disorder),y,descendant of concept mapped from leaf +727071000000103,Malaligned atrial septum with flap valve to muscular rim of oval fossa (disorder),y,descendant of concept mapped from leaf +445236007,Cardiorenal syndrome (disorder),y,descendant of concept mapped from leaf +449594001,Divided left atrium with some pulmonary veins to proximal chamber draining to left atrium and others connecting anomalously (disorder),y,descendant of concept mapped from leaf +735565009,Perforation of coronary artery co-occurrent and due to aneurysm of coronary artery (disorder),y,descendant of concept mapped from leaf +448062009,Ventricular septal defect with malaligned outlet septum (disorder),y,descendant of concept mapped from leaf +48447003,Chronic heart failure (disorder),y,descendant of concept mapped from leaf +15713201000119105,Acute ST segment elevation myocardial infarction of posterobasal wall (disorder),y,descendant of concept mapped from leaf +52048004,Rheumatic pulmonary valve failure (disorder),y,descendant of concept mapped from leaf +703385008,Anomalous origin of pulmonary artery from ascending aorta (disorder),y,descendant of concept mapped from leaf +766751007,Neuhauser anomaly (disorder),y,descendant of concept mapped from leaf +449138009,Right ventricular outflow tract obstruction due to septal hypertrophy (disorder),y,descendant of concept mapped from leaf +759521000000100,Congenital abnormality of mitral papillary muscle (disorder),y,descendant of concept mapped from leaf +448330004,Aneurysm of muscular septum (disorder),y,descendant of concept mapped from leaf +448809003,Common arterial trunk with obstruction of aortic arch (disorder),y,descendant of concept mapped from leaf +449032008,Congenital abnormality of right atrioventricular valve papillary muscle in double inlet ventricle (disorder),y,descendant of concept mapped from leaf +450307004,Major systemic to pulmonary collateral artery supplying entire right lung (disorder),y,descendant of concept mapped from leaf +120881000119106,Diastolic heart failure stage D (disorder),y,descendant of concept mapped from leaf +447774002,Congenital midvalvar ring of mitral leaflet (disorder),y,descendant of concept mapped from leaf +418461002,Fluoroscopic angioplasty of coronary artery (procedure),y,descendant of concept mapped from leaf +449576007,Left pulmonary artery with absent proximal arterial connection (disorder),y,descendant of concept mapped from leaf +236004002,Ascites co-occurrent and due to hepatic disorder (disorder),y,descendant of concept mapped from leaf +449270002,Hypoplasia of mitral valve annulus (disorder),y,descendant of concept mapped from leaf +83291003,Cor pulmonale (disorder),y,descendant of concept mapped from leaf +31881008,Cardiovascular renal disease (disorder),y,descendant of concept mapped from leaf +450314002,Vascular ring with right aortic arch and left patent ductus arteriosus (disorder),y,descendant of concept mapped from leaf +77696009,Double aortic valve (disorder),y,descendant of concept mapped from leaf +90202001,Dilated cardiomyopathy secondary to electrolyte deficiency (disorder),y,descendant of concept mapped from leaf +472324001,Fetal hypertrophic cardiomyopathy (disorder),y,descendant of concept mapped from leaf +449133000,Absence of pulmonary valve cusp (disorder),y,descendant of concept mapped from leaf +44313006,Right heart failure secondary to left heart failure (disorder),y,descendant of concept mapped from leaf +93445007,Dynamic subaortic stenosis (disorder),y,descendant of concept mapped from leaf +460585008,Anomalous course of coronary artery posterior to aorta (disorder),y,descendant of concept mapped from leaf +461436005,Anomalous origin of dual left anterior descending coronary arteries (disorder),y,descendant of concept mapped from leaf +17394001,Ebstein's anomaly with atrial septal defect (disorder),y,descendant of concept mapped from leaf +76257003,Bicuspid cardiac valve (disorder),y,descendant of concept mapped from leaf +405768001,Autotransplantation of heart (procedure),y,descendant of concept mapped from leaf +448072007,Single inlet ventricle with absent atrioventricular connection (disorder),y,descendant of concept mapped from leaf +461371009,Congenital hypoplasia of abdominal aorta (disorder),y,descendant of concept mapped from leaf +424404003,Decompensated chronic heart failure (disorder),y,descendant of concept mapped from leaf +10971000087107,Myocardial ischemia during surgery (disorder),y,descendant of concept mapped from leaf +73660006,Congenital subaortic stenosis (disorder),y,descendant of concept mapped from leaf +449457008,Atrioventricular septal defect with atrioventricular valve regurgitation through left superior bridging leaflet lateral mural commissure (disorder),y,descendant of concept mapped from leaf +448844001,Multiple mitral papillary muscles with hammock valve (disorder),y,descendant of concept mapped from leaf +448517004,Vascular ring with left aortic arch and retroesophageal right descending aorta and right arterial duct arising from aortic diverticulum and aberrant right subclavian artery (disorder),y,descendant of concept mapped from leaf +447700007,Distal aortopulmonary window with minimal superior rim (disorder),y,descendant of concept mapped from leaf +445454009,Left ventricular outflow tract obstruction due to atrioventricular valve (disorder),y,descendant of concept mapped from leaf +726335002,Common atrioventricular junction (disorder),y,descendant of concept mapped from leaf +448277007,Midline posterior apex of heart (disorder),y,descendant of concept mapped from leaf +34342000,Dilated cardiomyopathy secondary to deficiency (disorder),y,descendant of concept mapped from leaf +95440004,Atrial septal aneurysm (disorder),y,descendant of concept mapped from leaf +213215000,Cardiorespiratory failure as a complication of care (disorder),y,descendant of concept mapped from leaf +84648007,Acardius (disorder),y,descendant of concept mapped from leaf +449587004,Divided left atrium with all pulmonary veins to proximal chamber and then to left atrium with additional pulmonary venous chamber extracardiac communication (disorder),y,descendant of concept mapped from leaf +762433009,Tetralogy of Fallot with pulmonary atresia co-occurrent with systemic-to-pulmonary collateral artery (disorder),y,descendant of concept mapped from leaf +420006002,Obliterative coronary artery disease (disorder),y,descendant of concept mapped from leaf +448948004,Overriding ventriculoarterial valve (disorder),y,descendant of concept mapped from leaf +50275009,Cobalt cardiomyopathy (disorder),y,descendant of concept mapped from leaf +461439003,Widely spaced right coronary artery and left coronary artery orifices within single aortic sinus (disorder),y,descendant of concept mapped from leaf +722206009,"Pancreatic hypoplasia, diabetes mellitus, congenital heart disease syndrome (disorder)",y,descendant of concept mapped from leaf +763747002,Congenital aneurysm of membranous portion of interventricular septum (disorder),y,descendant of concept mapped from leaf +64749001,Dilated cardiomyopathy secondary to infiltration (disorder),y,descendant of concept mapped from leaf +443166007,Repair of total anomalous pulmonary venous connection of mixed type (procedure),y,descendant of concept mapped from leaf +719839000,Tubular renal disease with cardiomyopathy syndrome (disorder),y,descendant of concept mapped from leaf +462175008,Fetal heart failure with redistribution of cardiac output (disorder),y,descendant of concept mapped from leaf +473443007,Anomalous origin of right coronary artery (disorder),y,descendant of concept mapped from leaf +449520004,Right ventricular outflow tract obstruction due to septoparietal trabeculation (disorder),y,descendant of concept mapped from leaf +472807003,Ventricular septal defect due to and following infective endocarditis (disorder),y,descendant of concept mapped from leaf +447935001,Left ventricular myocardial noncompaction cardiomyopathy (disorder),y,descendant of concept mapped from leaf +448823001,Left ventricular outflow tract obstruction due to prolapse of Eustachian valve (disorder),y,descendant of concept mapped from leaf +450300002,Anomalous origin of right coronary artery from pulmonary artery (disorder),y,descendant of concept mapped from leaf +460587000,Anomalous origin of single coronary artery from left coronary artery aortic sinus (disorder),y,descendant of concept mapped from leaf +359601003,"Coronary artery bypass with autogenous graft of internal mammary artery, single graft (procedure)",y,descendant of concept mapped from leaf +448528000,Aneurysm of aortic sinus of Valsalva with rupture to pericardial cavity (disorder),y,descendant of concept mapped from leaf +445636003,Aortic orifice anterior right with respect to pulmonary orifice (disorder),y,descendant of concept mapped from leaf +448611005,Vascular ring with left aortic arch and retrotracheal right patent arterial duct (disorder),y,descendant of concept mapped from leaf +75205009,Urine ascites of the neonate (disorder),y,descendant of concept mapped from leaf +10757481000119107,Pre-existing hypertensive heart and chronic kidney disease in mother complicating pregnancy (disorder),y,descendant of concept mapped from leaf +44993000,Rheumatic mitral valve and aortic valve stenosis (disorder),y,descendant of concept mapped from leaf +736978009,Mural thrombus of right ventricle following acute myocardial infarction (disorder),y,descendant of concept mapped from leaf +446659000,Ventricular imbalance with dominant left ventricle and hypoplastic right ventricle (disorder),y,descendant of concept mapped from leaf +445299003,Atrioventricular septal defect with ventricular imbalance consisting of dominant right ventricle and hypoplastic left ventricle (disorder),y,descendant of concept mapped from leaf +704242009,Fetal heart failure due to extracardiac disease (disorder),y,descendant of concept mapped from leaf +29819009,Aortocoronary bypass of one coronary artery (procedure),y,descendant of concept mapped from leaf +79152002,Dilated cardiomyopathy secondary to neuromuscular disorder (disorder),y,descendant of concept mapped from leaf +236003008,Cardiac ascites (disorder),y,descendant of concept mapped from leaf +6022005,Dilated cardiomyopathy secondary to sarcoidosis (disorder),y,descendant of concept mapped from leaf +724436003,Congenital anomaly of abdominal aorta (disorder),y,descendant of concept mapped from leaf +472801002,Congenital subpulmonary stenosis due to restrictive ventricular defect associated with functionally univentricular heart (disorder),y,descendant of concept mapped from leaf +109427000,Supracristal ventricular septal defect (disorder),y,descendant of concept mapped from leaf +2816000,Dilated cardiomyopathy secondary to myotonic dystrophy (disorder),y,descendant of concept mapped from leaf +446667008,Two atrioventricular valves in double inlet ventricle (disorder),y,descendant of concept mapped from leaf +448208003,Nonrestrictive interatrial communication (disorder),y,descendant of concept mapped from leaf +61233003,Silo-fillers' disease (disorder),y,descendant of concept mapped from leaf +448075009,Uniatrial biventricular connection with absent right sided atrioventricular connection with straddling valve (disorder),y,descendant of concept mapped from leaf +448778001,Obstruction of right ventricular outflow tract due to aortico-left ventricular tunnel (disorder),y,descendant of concept mapped from leaf +449190000,Muscular ventricular septal defect in trabecular septum (disorder),y,descendant of concept mapped from leaf +460944005,Anomalous origin of right coronary artery from left coronary artery aortic sinus and anomalous origin of left coronary artery from right coronary artery aortic sinus (disorder),y,descendant of concept mapped from leaf +721010003,Heart-hand syndrome type 2 (disorder),y,descendant of concept mapped from leaf +472794005,Acquired subaortic stenosis associated with functionally univentricular heart (disorder),y,descendant of concept mapped from leaf +64627002,Acute myocardial infarction of high lateral wall (disorder),y,descendant of concept mapped from leaf +449427004,Double aortic arch with right arch dominant and left arch patent (disorder),y,descendant of concept mapped from leaf +450306008,Major systemic to pulmonary collateral artery supplying both lungs (disorder),y,descendant of concept mapped from leaf +46847001,Chronic pulmonary edema (disorder),y,descendant of concept mapped from leaf +450304006,Coarctation of suprarenal abdominal aorta (disorder),y,descendant of concept mapped from leaf +759861000000106,Subaortic right ventricular outflow tract obstruction (disorder),y,descendant of concept mapped from leaf +707371002,Congenital stenosis of left pulmonary artery (disorder),y,descendant of concept mapped from leaf +713617008,Percutaneous transluminal revascularization of chronic total occlusion of coronary artery using fluoroscopic guidance (procedure),y,descendant of concept mapped from leaf +721978002,"Lymphedema, atrial septal defect, facial changes syndrome (disorder)",y,descendant of concept mapped from leaf +447970004,Double aortic arch with left arch dominant and atresia of right arch (disorder),y,descendant of concept mapped from leaf +236005001,Malignant ascites (disorder),y,descendant of concept mapped from leaf +448577008,Muscular subvalvar atresia of aorta (disorder),y,descendant of concept mapped from leaf +282006,Acute myocardial infarction of basal-lateral wall (disorder),y,descendant of concept mapped from leaf +459164007,Systemic to pulmonary collateral artery from descending thoracic aorta (disorder),y,descendant of concept mapped from leaf +447830005,Congenital abnormality of tricuspid leaflet (disorder),y,descendant of concept mapped from leaf +25263003,Grafting of heart for revascularization (procedure),y,descendant of concept mapped from leaf +719835006,Wooly hair and palmoplantar keratoderma with dilated cardiomyopathy syndrome (disorder),y,descendant of concept mapped from leaf +460584007,Anomalous course of coronary artery posterior to pulmonary trunk (disorder),y,descendant of concept mapped from leaf +449440009,Divided left atrium with all pulmonary veins to proximal chamber without communication to left atrium with extracardiac pulmonary venous chamber communication (disorder),y,descendant of concept mapped from leaf +472316006,Hypertrophic mitochondrial cardiomyopathy (disorder),y,descendant of concept mapped from leaf +716193004,Short stature with valvular heart disease and characteristic facies syndrome (disorder),y,descendant of concept mapped from leaf +449188001,Left superior vena cava persisting to coronary sinus and then to right sided atrium (disorder),y,descendant of concept mapped from leaf +759871000000104,Two chambered right ventricle with ventricular septal defect above obstruction (disorder),y,descendant of concept mapped from leaf +1089431000000107,Postoperative nontransmural myocardial infarction (disorder),y,descendant of concept mapped from leaf +413994008,Dilated cardiomyopathy associated with connective tissue disorder (disorder),y,descendant of concept mapped from leaf +472854004,Regurgitation of fetal truncal valve (disorder),y,descendant of concept mapped from leaf +32574007,"Past myocardial infarction diagnosed on electrocardiogram AND/OR other special investigation, but currently presenting no symptoms (disorder)",y,descendant of concept mapped from leaf +449382009,Congenital abnormality of atrioventricular valve leaflet in atrioventricular septal defect (disorder),y,descendant of concept mapped from leaf +153951000119103,Acute on chronic combined systolic and diastolic heart failure (disorder),y,descendant of concept mapped from leaf +728371000000102,Divided left atrium with all pulmonary veins to proximal chamber draining to left atrium (disorder),y,descendant of concept mapped from leaf +460375006,Systemic to pulmonary collateral artery from left renal artery (disorder),y,descendant of concept mapped from leaf +430396006,Chronic systolic dysfunction of left ventricle (disorder),y,descendant of concept mapped from leaf +12363009,Complete repair of tetralogy of Fallot with closure of previous shunt (procedure),y,descendant of concept mapped from leaf +723336008,Fallot complex with intellectual disability and growth delay syndrome (disorder),y,descendant of concept mapped from leaf +704241002,Fetal hypertrophic cardiomyopathy due to maternal diabetes mellitus (disorder),y,descendant of concept mapped from leaf +91442002,Rheumatic pulmonary valve stenosis (disorder),y,descendant of concept mapped from leaf +703258003,Acquired pulmonary trunk stenosis (disorder),y,descendant of concept mapped from leaf +233706004,Drug-induced acute pulmonary edema (disorder),y,descendant of concept mapped from leaf +42866003,Congenital coronary artery sclerosis (disorder),y,descendant of concept mapped from leaf +449352003,Right ventricular outflow tract obstruction due to abnormal cardiac muscle bands (disorder),y,descendant of concept mapped from leaf +447665008,Interatrial communication through coronary sinus orifice (disorder),y,descendant of concept mapped from leaf +95437004,Non-cardiogenic pulmonary edema (disorder),y,descendant of concept mapped from leaf +1089451000000100,Acute nontransmural myocardial infarction (disorder),y,descendant of concept mapped from leaf +8209004,Dilated cardiomyopathy secondary to hemochromatosis (disorder),y,descendant of concept mapped from leaf +12563008,Dilated cardiomyopathy caused by radiation (disorder),y,descendant of concept mapped from leaf +449559008,Multiple stenoses of left pulmonary artery (disorder),y,descendant of concept mapped from leaf +449547009,Right pulmonary artery with absent proximal arterial connection (disorder),y,descendant of concept mapped from leaf +703252002,Acute myocardial infarction of anterior wall involving right ventricle (disorder),y,descendant of concept mapped from leaf +447930006,Double aortic arch with right arch dominant (disorder),y,descendant of concept mapped from leaf +461435009,Anomalous origin of left anterior descending coronary artery from right coronary artery aortic sinus (disorder),y,descendant of concept mapped from leaf +431667009,Intracoronary brachytherapy using fluoroscopic guidance (procedure),y,descendant of concept mapped from leaf +449379004,Atrioventricular septal defect with ventricular component under inferior bridging leaflet with chords to crest ventricular septum (disorder),y,descendant of concept mapped from leaf +722006004,Isotretinoin embryopathy-like syndrome (disorder),y,descendant of concept mapped from leaf +10674871000119105,Pulmonary edema caused by chemical fumes (disorder),y,descendant of concept mapped from leaf +699668009,Secondary nonischemic congestive cardiomyopathy (disorder),y,descendant of concept mapped from leaf +253729004,Left dominant coronary system (disorder),y,descendant of concept mapped from leaf +449087009,Ebstein's anomaly of right atrioventricular valve in functionally univentricular heart (disorder),y,descendant of concept mapped from leaf +42099002,Primary endomyocardial fibrosis restrictive cardiomyopathy (disorder),y,descendant of concept mapped from leaf +194741006,Rheumatic tricuspid stenosis and insufficiency (disorder),y,descendant of concept mapped from leaf +735579001,Residual interatrial communication following procedure (disorder),y,descendant of concept mapped from leaf +111283005,Chronic left-sided heart failure (disorder),y,descendant of concept mapped from leaf +445440001,Right ventricular aneurysm (disorder),y,descendant of concept mapped from leaf +449479003,Malattachment of atrial septum (disorder),y,descendant of concept mapped from leaf +703360004,Subsequent non-ST segment elevation myocardial infarction (disorder),y,descendant of concept mapped from leaf +61012002,Chronic rheumatic heart disease with myocarditis (disorder),y,descendant of concept mapped from leaf +720858001,Ehlers-Danlos syndrome cardiac valvular type (disorder),y,descendant of concept mapped from leaf +461434008,Major systemic to pulmonary collateral artery with pulmonary artery proximal to hilar bifurcation (disorder),y,descendant of concept mapped from leaf +263961009,Bilateral isomeric atria (disorder),y,descendant of concept mapped from leaf +10190003,Aortocoronary bypass of four or more coronary arteries (procedure),y,descendant of concept mapped from leaf +472325000,Fetal hypertrophic cardiomyopathy due to twin to twin transfusion syndrome (disorder),y,descendant of concept mapped from leaf +461562004,Atresia of aortic arch with fibrous cord (disorder),y,descendant of concept mapped from leaf +449599006,Malattachment of atrial septum with posterior aspect of septum primum to left (disorder),y,descendant of concept mapped from leaf +783611000000101,Frequency of angina ,n,via Query Table +194798004,Acute anteroapical infarction (disorder),n,via Query Table +589911000000106,Autograft replacement of three coronary arteries NEC (procedure),n,via Query Table +251961000000106,Excepted from heart failure quality indicators: Patient unsuitable ,n,via Query Table +492711000000108,Repair of total anomalous pulmonary venous connection by insertion of interatrial baffle with reconnection of superior caval vein to right atrial appendage (procedure),n,via Query Table +538561000000104,Correction of tetralogy of Fallot NOS (procedure),n,via Query Table +539061000000102,Correction of total anomalous pulmonary venous connection NOS (procedure),n,via Query Table +205890008,"[X]Congenital malformation of tricuspid valve, unspecified (disorder)",n,via Query Table +728421000000109,Divided left atrium with nonrestrictive outlet of proximal chamber to left atrium (disorder),n,via Query Table +565751000000108,Angina control NOS (finding),n,via Query Table +589871000000109,Other autograft replacement of coronary artery (procedure),n,via Query Table +320371000000101,Emergency admission - ischaemic heart disease ,n,via Query Table +259501000000101,Repair of arteriovenous malformation of coronary artery ,n,via Query Table +589901000000109,Autograft replacement of two coronary arteries NEC (procedure),n,via Query Table +753551000000108,Divided left atrium with some pulmonary veins to proximal chamber draining to left atrium and others connecting directly to left atrium (disorder),n,via Query Table +223171000000101,Repair of rupture of coronary artery (procedure),n,via Query Table +727621000000105,Partial anomalous pulmonary venous connection of entire right lung (disorder),n,via Query Table +677131000000105,"Postoperative myocardial infarction, unspecified (disorder)",n,via Query Table +464231000000104,[X]Other congenital malformations of pulmonary valve (disorder),n,via Query Table +259051000000108,Take down of total cavopulmonary connection ,n,via Query Table +232971000000107,Percutaneous transluminal cutting balloon angioplasty of coronary artery (procedure),n,via Query Table +726701000000105,Criss-cross heart with rightward rotation (disorder),n,via Query Table +676131000000108,"Tetralogy of Fallot, unspecified (disorder)",n,via Query Table +368871000000102,Arrhythmogenic right ventricular cardiomyopathy ,n,via Query Table +841141000000104,Subacute ischaemic heart disease (disorder),n,via Query Table +320361000000108,Emergency admission - ischaemic heart disease ,n,via Query Table +753561000000106,Divided left atrium with some pulmonary veins to proximal chamber draining to left atrium and others connecting anomalously (disorder),n,via Query Table +381191000000102,Excepted from scardiovascular disease quality indicators: informed dissent ,n,via Query Table +182551000000100,Fluoroscopic angioplasty of coronary artery (procedure),n,via Query Table +639231000000108,Heart - arterial implant NOS (procedure),n,via Query Table +397041000000101,[D]Ascites NOS (context-dependent category),n,via Query Table +32598000,Acute ischemic heart disease (disorder),n,via Query Table +419231000000102,[X]Other restrictive cardiomyopathy (disorder),n,via Query Table +232961000000100,Repositioning of transposed great arteries (procedure),n,via Query Table +38801000000100,Coronary heart disease monitoring 3rd letter (finding),n,via Query Table +175032005,Prosthetic replacement of three coronary arteries (procedure),n,via Query Table +258871000000100,Repair of double outlet right ventricle ,n,via Query Table +64333001,Preinfarction angina (disorder),n,via Query Table +581511000000103,Other specified anterior myocardial infarction (disorder),n,via Query Table +578421000000109,Electrocardiogram: myocardial infarct NOS (finding),n,via Query Table +918151000000107,Left ventricular outflow tract obstruction,n,via Query Table +536971000000101,Other replacement of coronary artery (procedure),n,via Query Table +712421000000102,Midline posterior apex of heart (disorder),n,via Query Table +233879000,Specific heart muscle disorder (disorder),n,via Query Table +253041000000107,Heart failure 6 month review ,n,via Query Table +539081000000106,On examination - ascites NOS (disorder),n,via Query Table +591181000000101,Other specified connection of other thoracic artery to coronary artery (procedure),n,via Query Table +627861000000109,Congenital atresia of pulmonary valve NOS (disorder),n,via Query Table +253560002,Ventricular septal defect with malaligned outlet septum to left overriding aortic valve (disorder),n,via Query Table +297401000000100,Electrocardiogram shows anterior myocardial infarction (finding),n,via Query Table +614081000000109,Atresia or stenosis of aorta NOS (disorder),n,via Query Table +726941000000105,Ebstein's anomaly of tricuspid valve with atrialisation of right ventricular chamber (disorder),n,via Query Table +250471000000100,Congenital heart condition monitoring ,n,via Query Table +89791000000100,Excepted from CHD quality indicators: Patient unsuitable (administrative concept),n,via Query Table +442511000000106,[X]Cardiomyopathy in metabolic diseases classified elsewhere (disorder),n,via Query Table +274661000000100,Heart failure monitoring second letter ,n,via Query Table +726881000000109,Congenital deformity of mitral valve annulus (disorder),n,via Query Table +659411000000100,"Congenital aortic valve insufficiency, unspecified (disorder)",n,via Query Table +727921000000101,Intracardiac location of anomalous pulmonary venous connection to coronary sinus (disorder),n,via Query Table +175031003,Prosthetic replacement of two coronary arteries (procedure),n,via Query Table +684221000000101,Hypertensive heart disease NOS without congestive cardiac failure (disorder),n,via Query Table +599271000000109,Hypertensive heart disease NOS with congestive cardiac failure (disorder),n,via Query Table +248531000000101,Heart failure monitoring third letter (administrative concept),n,via Query Table +728711000000106,Right ventricle posterior to left ventricle (disorder),n,via Query Table +727521000000109,Hepatic vein to coronary sinus (disorder),n,via Query Table +251681000000108,Heart failure monitoring second letter ,n,via Query Table +191651000000108,Admit heart failure emergency,n,via Query Table +751161000000102,Aortic orifice right side by side with respect to pulmonary orifice (disorder),n,via Query Table +569961000000105,Other open operation on coronary artery NOS (procedure),n,via Query Table +728601000000102,Double outlet right ventricle with subpulmonary ventricular septal defect (disorder),n,via Query Table +258811000000105,Repositioning of transposed great arteries ,n,via Query Table +676111000000100,Other specified transposition of great vessels (disorder),n,via Query Table +659421000000106,Congenital aortic valve insufficiency NOS (disorder),n,via Query Table +204376008,Coronary artery from aorta (disorder),n,via Query Table +668811000000101,Other specified atrial septal defect (disorder),n,via Query Table +297461000000101,Electrocardiogram shows inferior myocardial infarction (finding),n,via Query Table +726671000000106,Double outlet ventriculoarterial connection (disorder),n,via Query Table +253661009,Double aortic arch with unilateral hypoplasia (disorder),n,via Query Table +726491000000108,Absent atrioventricular connection - single inlet ventricle (disorder),n,via Query Table +727771000000100,Anomalous pulmonary venous connection of mixed type (disorder),n,via Query Table +111282000,Acute respiratory insufficiency (disorder),n,via Query Table +444321000000101,[X]Subsequent myocardial infarction of other sites (disorder),n,via Query Table +917861000000101,Angina self management plan completed,n,via Query Table +223631000000109,Percutaneous transluminal balloon angioplasty and stenting of coronary artery (procedure),n,via Query Table +588811000000108,Connection of mammary artery to coronary artery NOS (procedure),n,via Query Table +727971000000102,Intracardiac location of anomalous pulmonary venous connection to midline with isomeric atrium (disorder),n,via Query Table +582901000000101,Other bypass of coronary artery NOS (procedure),n,via Query Table +338101000000107,Congestive heart failure due to valvular disease,n,via Query Table +253666004,Vascular ring components (disorder),n,via Query Table +237241000000107,Other specified repair of univentricular heart (procedure),n,via Query Table +727241000000100,Left superior vena cava persisting to right atrium (disorder),n,via Query Table +128572008,Right ventricle outflow chamber (disorder),n,via Query Table +776291000000108,Referral to heart failure exercise programme not indicated (situation),n,via Query Table +656811000000106,Heart or cardiac apex malposition NOS (disorder),n,via Query Table +608451000000100,Other chronic pulmonary heart disease NOS (disorder),n,via Query Table +194766005,Benign hypertensive heart disease without congestive cardiac failure (disorder),n,via Query Table +176331000000107,Acute coronary syndrome,n,via Query Table +507621000000100,Percutaneous embolisation of coronary arteriovenous fistula using fluoroscopic guidance (procedure),n,via Query Table +266242007,Obscure African cardiomyopathy (disorder),n,via Query Table +1064941000000106,Heart failure with reduced ejection fraction (disorder),n,via Query Table +713211000000101,Congenital tricuspid papillary muscle abnormality (disorder),n,via Query Table +728151000000109,Congenital abnormality of cardiac vein (disorder),n,via Query Table +726961000000106,Ebstein's anomaly of left atrioventricular valve in functionally univentricular heart (disorder),n,via Query Table +585651000000102,Other specified other bypass of coronary artery (procedure),n,via Query Table +249291000000108,Excepted from heart failure quality indicators: Patient unsuitable (administrative concept),n,via Query Table +728821000000107,Right ventricular outflow tract obstruction due to septoparietal trabeculation (disorder),n,via Query Table +253557009,Ventricular septal defect with malaligned outlet septum to right overriding aortic valve (disorder),n,via Query Table +52295007,Subendocardial infarction by EKG (finding),n,via Query Table +448114001,Aberrant course of coronary artery between aorta and pulmonary trunk (disorder),n,via Query Table +491601000000108,Repair of total anomalous pulmonary venous connection to right atrium by atrial septum translocation (procedure),n,via Query Table +727541000000102,Total anomalous pulmonary venous connection of intracardiac type (disorder),n,via Query Table +284831000119107,Anomalous origin of left coronary artery from pulmonary artery (disorder),n,via Query Table +728431000000106,Congenital abnormality of atrial septum (disorder),n,via Query Table +407605008,New York Heart Association classification - class I (assessment scale),n,via Query Table +612641000000100,Endocardial cushion defects NOS (disorder),n,via Query Table +407607000,New York Heart Association classification - class III (assessment scale),n,via Query Table +82109007,Isolated levocardia (disorder),n,via Query Table +726591000000109,Two atrioventricular valves in double inlet ventricle (disorder),n,via Query Table +38781000000101,Coronary heart disease monitoring 1st letter (finding),n,via Query Table +728141000000106,Diverticulum of coronary sinus (disorder),n,via Query Table +425961000000106,[X]Other congenital malformations of pulmonary artery (disorder),n,via Query Table +728291000000106,Absent ductus venosus with direct connection of umbilical vein to right atrium (disorder),n,via Query Table +37689002,Holoacardius (disorder),n,via Query Table +325431000000103,Congestive heart failure due to valvular disease (disorder),n,via Query Table +259041000000105,Biventricular repair of hypoplastic left heart syndrome ,n,via Query Table +591161000000105,Other open operations on coronary artery (procedure),n,via Query Table +316095000,[V]Presence of aortocoronary bypass graft (situation),n,via Query Table +643821000000108,"Anomaly of the pulmonary veins, unspecified (disorder)",n,via Query Table +194832006,Stenocardia (disorder),n,via Query Table +727981000000100,Infracardiac location of anomalous pulmonary venous connection (disorder),n,via Query Table +727871000000105,Supracardiac location of anomalous pulmonary venous connection to right superior vena cava (disorder),n,via Query Table +727111000000109,Ventricular imbalance (disorder),n,via Query Table +88596007,Coronary artery arising from aorta (disorder),n,via Query Table +776301000000107,Referral to heart failure exercise programme not indicated ,n,via Query Table +727701000000108,Obstructed pulmonary venous connection due to extrinsic compression between left pulmonary artery and bronchus (disorder),n,via Query Table +727891000000109,Supracardiac location of anomalous pulmonary venous connection to azygos vein (disorder),n,via Query Table +890631000000101,Emergency percutaneous coronary intervention,n,via Query Table +841981000000109,Percutaneous coronary intervention (procedure),n,via Query Table +223311000000108,Repair of double chambered right ventricle (procedure),n,via Query Table +764861000000104,Worsening pulmonary oedema ,n,via Query Table +586341000000100,Transplantation of heart and lung NOS (procedure),n,via Query Table +251971000000104,Excepted from heart failure quality indicators: Informed dissent ,n,via Query Table +373145006,Double vessel coronary artery disease (disorder),n,via Query Table +727641000000103,Partial anomalous pulmonary venous connection of part of right lung (disorder),n,via Query Table +728451000000104,Premature restriction of foramen ovale (disorder),n,via Query Table +464561000000107,[X]Cardiomyopathy in other diseases classified elsewhere (disorder),n,via Query Table +752191000000102,Coronary angioplasty planned ,n,via Query Table +202251000000104,Heart failure care plan discussed with patient (procedure),n,via Query Table +853601000000109,Referral to Angina Plan self-management programme declined ,n,via Query Table +31420001,Levocardia (disorder),n,via Query Table +668581000000106,Other cardiac wall aneurysm (disorder),n,via Query Table +92518001,Canine dilated cardiomyopathy (disorder),n,via Query Table +259471000000108,Percutaneous transluminal cutting balloon angioplasty of coronary artery ,n,via Query Table +472771009,Excessive restriction of ventricular septal defect as complication of procedure (disorder),n,via Query Table +727751000000109,Obstructed pulmonary venous connection at coronary sinus orifice (disorder),n,via Query Table +586381000000108,Percutaneous transluminal injection of therapeutic substance into coronary artery NEC (procedure),n,via Query Table +258631000000103,Atrial switch and arterial switch ,n,via Query Table +253572008,Abnormal infundibular morphology (disorder),n,via Query Table +750781000000101,Percutaneous insertion of stent into aneurysm of coronary artery using fluoroscopic guidance (procedure),n,via Query Table +409621000000103,[X]Subsequent myocardial infarction of unspecified site (disorder),n,via Query Table +223181000000104,Repair of arteriovenous malformation of coronary artery (procedure),n,via Query Table +248701000000104,Exception reporting: heart failure quality indicators (administrative concept),n,via Query Table +212721000000104,Cardiac syndrome X,n,via Query Table +224061000000109,Repair of double outlet right ventricle with intraventricular tunnel (procedure),n,via Query Table +432391000000106,"[X]Congenital malformation of tricuspid valve, unspecified",n,via Query Table +396561000000107,"[X]Congenital malformation of great arteries, unspecified (disorder)",n,via Query Table +207252009,[D]Ascites (situation),n,via Query Table +516941000000102,Aortic orifice anterior right to pulmonary orifice (disorder),n,via Query Table +224121000000102,Total cavopulmonary connection with lateral atrial tunnel (procedure),n,via Query Table +3192005,Infundibular pulmonic stenosis (disorder),n,via Query Table +517421000000104,Apex of heart posterior to cardiac base (disorder),n,via Query Table +540201000000103,Revision of bypass for coronary artery NOS (procedure),n,via Query Table +885321000000101,Left ventricular cardiac dysfunction ,n,via Query Table +253101000000105,Congenital heart condition monitoring ,n,via Query Table +400941000000105,[V]Presence of coronary artery bypass graft,n,via Query Table +443626009,Common cardiac ventricle (morphologic abnormality),n,via Query Table +555721000000106,Repair of coronary artery NOS (procedure),n,via Query Table +749771000000107,Takotsubo cardiomyopathy (disorder),n,via Query Table +894611000000100,Right ventricular systolic dysfunction ,n,via Query Table +469611000000108,[V]Presence of coronary artery bypass graft (situation),n,via Query Table +783601000000103,Frequency of angina (observable entity),n,via Query Table +727901000000105,Supracardiac location of anomalous pulmonary venous connection to hemiazygos vein (disorder),n,via Query Table +491721000000105,Repair of total anomalous pulmonary venous connection of mixed type (procedure),n,via Query Table +449829009,Loeffler's endocarditis (disorder),n,via Query Table +250411000000105,Heart failure 6 month review ,n,via Query Table +251025005,Coronary graft occluded (disorder),n,via Query Table +728031000000101,Infracardiac location of anomalous pulmonary venous connection with two descending veins (disorder),n,via Query Table +237281000000104,Percutaneous transluminal balloon angioplasty and insertion of 1-2 drug eluting stents into coronary artery (procedure),n,via Query Table +258581000000100,Repair of tetralogy of Fallot using transannular patch ,n,via Query Table +881331000000102,Emergency percutaneous coronary intervention (procedure),n,via Query Table +687081000000103,Coarctation of aorta NOS (disorder),n,via Query Table +664221000000104,Ostium secundum atrial septal defect NOS (disorder),n,via Query Table +232951000000103,Other repair of transposition of great arteries (procedure),n,via Query Table +727951000000106,Intracardiac location of anomalous pulmonary venous connection to right atrium (disorder),n,via Query Table +416461000000103,[X]Other acute rheumatic heart disease (disorder),n,via Query Table +89600009,Secondary cardiomyopathy (disorder),n,via Query Table +469031000000107,[V]Presence of aortocoronary bypass graft (situation),n,via Query Table +214611000000109,Transfer of care from paediatric congenital heart service,n,via Query Table +516841000000106,Right ventricular aneurysm (disorder),n,via Query Table +233661000000101,Percutaneous transluminal balloon angioplasty and insertion of 1-2 stents into coronary artery (procedure),n,via Query Table +873891000000103,Referral to rapid access heart failure clinic ,n,via Query Table +727991000000103,Infracardiac location of anomalous pulmonary venous connection to portal system (disorder),n,via Query Table +29201009,Dilated cardiomyopathy secondary to sensitivity (disorder),n,via Query Table +526811000000101,Excepted from myocardial infarction quality indicators: patient unsuitable ,n,via Query Table +492051000000105,Repair of total anomalous pulmonary venous connection by coronary sinus cutback to oval fossa with insertion of interatrial baffle (procedure),n,via Query Table +727491000000106,Hepatic vein to right sided atrium (disorder),n,via Query Table +589881000000106,Autograft replacement of one coronary artery NEC (procedure),n,via Query Table +727631000000107,Partial anomalous pulmonary venous connection of entire left lung (disorder),n,via Query Table +728181000000103,Congenital abnormality of posterior cardiac vein of left ventricle (disorder),n,via Query Table +1033151000000100,Non-obstructive coronary atherosclerosis (disorder),n,via Query Table +837101000000108,H/O acute coronary syndrome ,n,via Query Table +811911000000109,Angina self-management plan agreed ,n,via Query Table +271441000,Dextraposition of aorta (disorder),n,via Query Table +698361000000107,"Hypoplasia of aortic arch, unspecified (disorder)",n,via Query Table +175009006,Saphenous vein graft replacement of three coronary arteries (procedure),n,via Query Table +924381000000104,Percutaneous transluminal revascularisation of chronic total occlusion of coronary artery using fluoroscopic guidance (procedure),n,via Query Table +692851000000102,Other heart bulb and septal closure defect (disorder),n,via Query Table +583961000000105,Prosthetic replacement of coronary artery NOS (procedure),n,via Query Table +439211000000102,[X]Other congenital malformations of great arteries (disorder),n,via Query Table +692861000000104,Heart bulb or septal closure defects NOS (disorder),n,via Query Table +258621000000100,Left ventricle to aorta tunnel with right ventricle to pulmonary artery valved conduit ,n,via Query Table +519531000000108,Cardiorenal syndrome (disorder),n,via Query Table +727531000000106,Total anomalous pulmonary venous connection of supracardiac type (disorder),n,via Query Table +581151000000108,Connection of other thoracic artery to coronary artery (procedure),n,via Query Table +248511000000109,Heart failure monitoring first letter (administrative concept),n,via Query Table +595941000000109,Other autograft replacement of coronary artery NOS (procedure),n,via Query Table +43395008,Fallot's triad (disorder),n,via Query Table +367416001,Angina pectoris (disorder),n,via Query Table +282811000000103,Atrial inversion operations for transposition of great arteries (procedure),n,via Query Table +297411000000103,Electrocardiogram shows posterior myocardial infarction (finding),n,via Query Table +776251000000100,Referral to heart failure exercise programme declined (situation),n,via Query Table +259021000000103,Radical aortopulmonary reconstruction with systemic-to-pulmonary arterial shunt ,n,via Query Table +603901000000104,Lateral myocardial infarction NOS (disorder),n,via Query Table +274641000000101,Heart failure monitoring verbal invite ,n,via Query Table +259821000000107,Percutaneous transluminal balloon angioplasty and insertion of 1-2 stents into coronary artery ,n,via Query Table +727781000000103,Anomalous pulmonary venous connection of mixed type with one pulmonary venous confluence (disorder),n,via Query Table +24080003,Single vessel percutaneous transluminal coronary angioplasty with thrombolytic agent infusion (procedure),n,via Query Table +259491000000107,Repair of rupture of coronary artery ,n,via Query Table +728341000000108,Congenital abnormality of left atrium (disorder),n,via Query Table +381181000000104,Excepted from scardiovascular disease quality indicators: informed dissent ,n,via Query Table +248521000000103,Heart failure monitoring second letter (administrative concept),n,via Query Table +891411000000100,Rheumatic heart disease,n,via Query Table +428191000000108,"[X]Congenital malformation of tricuspid valve, unspecified (disorder)",n,via Query Table +752181000000104,Coronary angioplasty planned (situation),n,via Query Table +726411000000104,Midline apex of heart (disorder),n,via Query Table +657501000000108,Common aortopulmonary trunk NOS (disorder),n,via Query Table +753501000000107,Divided left atrium with all pulmonary veins to proximal chamber without communication to left atrium with extracardiac pulmonary venous chamber communication (disorder),n,via Query Table +224131000000100,Radical aortopulmonary reconstruction with systemic-to-pulmonary arterial shunt (procedure),n,via Query Table +757071000000102,Takotsubo cardiomyopathy,n,via Query Table +253558004,Ventricular septal defect with malaligned outlet septum to right overriding pulmonary valve (disorder),n,via Query Table +516951000000104,Aortic orifice anterior to pulmonary orifice (disorder),n,via Query Table +373146007,Triple vessel coronary artery disease (disorder),n,via Query Table +727711000000105,Obstructed pulmonary venous connection due to extrinsic compression between right pulmonary artery and trachea (disorder),n,via Query Table +727661000000102,Partial anomalous pulmonary venous connection with anomalous veins connecting first to pulmonary venous confluence (disorder),n,via Query Table +175022003,Allograft replacement of one coronary artery (procedure),n,via Query Table +321551000000106,Fluoroscopy guided intracoronary brachytherapy (procedure),n,via Query Table +728701000000109,Right ventricle inferior to left ventricle (disorder),n,via Query Table +259001000000107,Total cavopulmonary connection with extracardiac inferior caval vein to pulmonary artery conduit ,n,via Query Table +274931000000102,Exception reporting: heart failure quality indicators ,n,via Query Table +451911000000108,[X]Congenital malformation of aortic and mitral valves unspecified (disorder),n,via Query Table +259481000000105,Percutaneous endarterectomy of coronary artery ,n,via Query Table +274561000000104,Coronary heart disease monitoring telephone invite ,n,via Query Table +726931000000101,Ebstein's anomaly with functional tricuspid stenosis (disorder),n,via Query Table +568721000000106,Other specified transplantation of heart and lung (procedure),n,via Query Table +728051000000108,Completely unroofed coronary sinus defect in left atrium (disorder),n,via Query Table +728661000000103,Solitary ventricle of indeterminate morphology (disorder),n,via Query Table +621571000000106,Angina decubitus NOS (disorder),n,via Query Table +259811000000101,Percutaneous transluminal balloon angioplasty and insertion of 3 or more drug eluting stents into coronary artery ,n,via Query Table +596001000000100,Other transplantation of heart NOS (procedure),n,via Query Table +274941000000106,Excepted from heart failure quality indicators: Patient unsuitable ,n,via Query Table +591061000000109,Other specified correction of total anomalous pulmonary venous connection (procedure),n,via Query Table +728261000000100,Absent ductus venosus (disorder),n,via Query Table +727911000000107,Intracardiac location of anomalous pulmonary venous connection (disorder),n,via Query Table +170598003,Angina control NOS (finding),n,via Query Table +728021000000103,Infracardiac location of anomalous pulmonary venous connection to hepatic vein (disorder),n,via Query Table +789631000000107,Preferred place of care for next exacerbation of heart failure ,n,via Query Table +248381000000108,Heart failure monitoring telephone invite (administrative concept),n,via Query Table +709791000000102,Coronary artery bypass graft operation planned (situation),n,via Query Table +727101000000107,Malalignment of aortic sinus in relation to pulmonary sinus (disorder),n,via Query Table +175026000,Allograft replacement of four or more coronary arteries (procedure),n,via Query Table +555691000000102,Diagnostic transluminal operation on coronary artery NOS (procedure),n,via Query Table +753591000000100,Divided left atrium with some pulmonary veins to proximal chamber draining to right atrium and others connecting anomalously (disorder),n,via Query Table +753511000000109,Divided left atrium with some pulmonary veins to proximal chamber (disorder),n,via Query Table +581521000000109,Anterior myocardial infarction NOS (disorder),n,via Query Table +407608005,New York Heart Association classification - class IV (assessment scale),n,via Query Table +409301000000104,[X]Other congenital malformations of cardiac septa (disorder),n,via Query Table +429371000000100,[X]Other rheumatic aortic valve diseases (disorder),n,via Query Table +128570000,Left ventricle outflow chamber (disorder),n,via Query Table +536981000000104,Other specified replacement of coronary artery (procedure),n,via Query Table +233561000000100,Repair of univentricular heart NOS (procedure),n,via Query Table +258851000000109,Repair of double outlet right ventricle with intraventricular tunnel ,n,via Query Table +517411000000105,Apex of heart anterior to cardiac base (disorder),n,via Query Table +668801000000103,Transposition of arterial trunk NEC (disorder),n,via Query Table +253662002,Double aortic arch with unilateral atresia (disorder),n,via Query Table +728161000000107,Anomalous coronary venous return (disorder),n,via Query Table +894601000000102,Right ventricular systolic dysfunction (disorder),n,via Query Table +208101000000107,Heart failure care plan discussed with patient,n,via Query Table +726691000000105,Criss-cross heart with leftward rotation (disorder),n,via Query Table +373144005,Single vessel coronary artery disease (disorder),n,via Query Table +253561003,Ventricular septal defect with malaligned outlet septum to left overriding pulmonary valve (disorder),n,via Query Table +471711000000109,[X]Acute transmural myocardial infarction of unspecified site (disorder),n,via Query Table +526721000000100,Exception reporting: myocardial infarction quality indicators (finding),n,via Query Table +89781000000102,Exception reporting: CHD quality indicators (administrative concept),n,via Query Table +728271000000107,Absent ductus venosus with direct connection of umbilical vein to inferior vena cava (disorder),n,via Query Table +320351000000105,Admit ischemic heart disease emergency (procedure),n,via Query Table +286741000000108,Review of patient at risk from coronary heart disease ,n,via Query Table +1086811000000105,Percutaneous transluminal coronary angioplasty using drug eluting balloon catheter (procedure),n,via Query Table +726921000000103,Ebstein's anomaly of left sided tricuspid valve with discordant atrioventricular connection (disorder),n,via Query Table +374251000000106,Heart failure screening invitation ,n,via Query Table +526781000000104,Excepted from myocardial infarction quality indicators: informed dissent (finding),n,via Query Table +253372007,Restrictive atrial septal defect with obligatory shunt (disorder),n,via Query Table +537001000000108,Other bypass of coronary artery (procedure),n,via Query Table +1051071000000107,Coronary artery dissection,n,via Query Table +811711000000107,Angina self-management plan review ,n,via Query Table +204310005,Interventricular septal defect (disorder),n,via Query Table +853571000000102,Referral to Angina Plan self-management programme ,n,via Query Table +22111008,Anteroseptal infarction by EKG (finding),n,via Query Table +727961000000109,Intracardiac location of anomalous pulmonary venous connection to bilateral isomeric atrium (disorder),n,via Query Table +292721000000103,Congenital heart disease,n,via Query Table +728001000000107,Infracardiac location of anomalous pulmonary venous connection to inferior vena cava (disorder),n,via Query Table +87064008,Lateral infarction by EKG (finding),n,via Query Table +603911000000102,Inferior myocardial infarction NOS (disorder),n,via Query Table +2180001,Dilated cardiomyopathy secondary to connective tissue disorder (disorder),n,via Query Table +175062004,Transposition of coronary artery NEC (procedure),n,via Query Table +612101000000109,Rheumatic tricuspid valve disease NOS (disorder),n,via Query Table +312651000000106,Fluoroscopic percutaneous transluminal angioplasty of coronary artery (procedure),n,via Query Table +537011000000105,Coronary artery operations NOS (procedure),n,via Query Table +753481000000103,Divided left atrium with all pulmonary veins to proximal chamber without communication to left atrium (disorder),n,via Query Table +253701002,Variant coronary origin from left sinus (disorder),n,via Query Table +728201000000104,Congenital abnormality of great cardiac vein (disorder),n,via Query Table +632061000000101,Chronic rheumatic pericarditis NOS (disorder),n,via Query Table +834741000000101,Right ventricular failure,n,via Query Table +727061000000105,Malattachment of atrial septum with posterior aspect of septum primum to left (disorder),n,via Query Table +603891000000100,Post cardiac operation heart failure NOS (disorder),n,via Query Table +516971000000108,Aortic orifice left side by side to pulmonary orifice (disorder),n,via Query Table +831781000000107,Diastolic dysfunction,n,via Query Table +516961000000101,Aortic orifice anterior left to pulmonary orifice (disorder),n,via Query Table +414541000000105,[X]Other forms of chronic ischaemic heart disease (disorder),n,via Query Table +586361000000104,Transluminal balloon angioplasty of coronary artery NOS (procedure),n,via Query Table +605041000000104,Rheumatic mitral disease NOS (disorder),n,via Query Table +601601000000109,Acute pulmonary edema unspecified (disorder),n,via Query Table +728041000000105,Interatrial communication through coronary sinus orifice (disorder),n,via Query Table +657511000000105,"Double outlet right ventricle, unspecified (disorder)",n,via Query Table +562851000000107,Allotransplantation of heart NEC (procedure),n,via Query Table +538891000000107,Endarterectomy of coronary artery NEC (procedure),n,via Query Table +248501000000107,Heart failure monitoring verbal invite (administrative concept),n,via Query Table +359620001,Acute right heart failure (disorder),n,via Query Table +608851000000103,Congenital tricuspid atresia or stenosis NOS (disorder),n,via Query Table +1720006,Dextroposition of aorta (disorder),n,via Query Table +259011000000109,Total cavopulmonary connection with lateral atrial tunnel ,n,via Query Table +627871000000102,Congenital pulmonary stenosis NOS (disorder),n,via Query Table +713221000000107,Congenital abnormality of tricuspid leaflet (disorder),n,via Query Table +492671000000107,Repair of total anomalous pulmonary venous connection by unroofing and closure of coronary sinus and interatrial communication (procedure),n,via Query Table +643871000000107,Preinfarction syndrome NOS (disorder),n,via Query Table +885311000000107,Left ventricular cardiac dysfunction (disorder),n,via Query Table +569971000000103,Other specified transluminal balloon angioplasty of coronary artery (procedure),n,via Query Table +589951000000105,Allograft replacement of coronary artery NOS (procedure),n,via Query Table +442521000000100,[X]Cardiomyopathy in nutritional diseases classified elsewhere (disorder),n,via Query Table +757101000000106,Heart failure with normal ejection fraction,n,via Query Table +727051000000107,Malattachment of atrial septum with superior aspect of septum primum to left and posterior (disorder),n,via Query Table +614071000000107,Aortic arch anomalies NOS (disorder),n,via Query Table +361215006,Coronary artery abnormality (disorder),n,via Query Table +418901000000107,[X]Other specified rheumatic heart diseases (disorder),n,via Query Table +771581000000100,Repair of tetralogy of Fallot using right ventricular outflow conduit (procedure),n,via Query Table +726471000000109,Indeterminate atrial arrangement (disorder),n,via Query Table +726461000000102,Abnormal atrial arrangement (disorder),n,via Query Table +728351000000106,Supravalvar mitral ring (disorder),n,via Query Table +654291000000107,Rheumatic heart disease unspecified (disorder),n,via Query Table +274671000000107,Heart failure monitoring third letter ,n,via Query Table +251651000000102,Heart failure monitoring telephone invite ,n,via Query Table +38842003,Lutembacher's anomaly (disorder),n,via Query Table +595931000000100,Other specified revision of bypass for coronary artery (procedure),n,via Query Table +728671000000105,Superior to inferior ventricular relationship (disorder),n,via Query Table +781061000000106,Has heart failure management plan ,n,via Query Table +807951000000103,Cardiothoracic transplantation,n,via Query Table +712411000000108,Midline anterior apex of heart (disorder),n,via Query Table +834611000000108,Chemical-induced pulmonary oedema,n,via Query Table +847051000000107,Amyloid cardiomyopathy ,n,via Query Table +11511004,Hypertensive heart AND renal disease complicating AND/OR reason for care during puerperium (disorder),n,via Query Table +77737007,Benign hypertensive heart disease with congestive heart failure (disorder),n,via Query Table +726551000000101,Absent right sided atrioventricular connection - univentricular (disorder),n,via Query Table +1088021000000109,Andersen Tawil syndrome (disorder),n,via Query Table +752481000000106,Percutaneous insertion of drug eluting stent into coronary artery using fluoroscopic guidance (procedure),n,via Query Table +253709000,Abnormal coronary orifice (disorder),n,via Query Table +258991000000107,Repair of univentricular heart ,n,via Query Table +727841000000104,Supracardiac location of anomalous pulmonary venous connection (disorder),n,via Query Table +507031000000105,Repair of total anomalous pulmonary venous connection of intracardiac type (procedure),n,via Query Table +207253004,[D]Fluid in peritoneal cavity (situation),n,via Query Table +8957000,Coronary artery disease (disorder),n,via Query Table +614131000000109,"Anomaly of the vena cava, unspecified (disorder)",n,via Query Table +175011002,Saphenous vein graft replacement of four or more coronary arteries (procedure),n,via Query Table +831691000000102,Right ventricular outflow tract obstruction,n,via Query Table +70390005,Dissecting aneurysm of coronary artery (disorder),n,via Query Table +728321000000101,Prolapse of Eustachian valve through atrial septum (disorder),n,via Query Table +763651000000104,Referral to heart failure education group declined ,n,via Query Table +539031000000107,Other correction of transposition of great vessels (procedure),n,via Query Table +402241000000101,[X]Other cardiomyopathies (disorder),n,via Query Table +728121000000104,Coronary sinus drainage cephalad to right superior vena cava (disorder),n,via Query Table +249301000000107,Excepted from heart failure quality indicators: Informed dissent (administrative concept),n,via Query Table +287287007,Make heart septal defect (disorder),n,via Query Table +251581000000107,Coronary heart disease monitoring telephone invite ,n,via Query Table +753571000000104,Divided left atrium with some pulmonary veins to proximal chamber draining to right atrium (disorder),n,via Query Table +728681000000107,Right ventricle to left of left ventricle (disorder),n,via Query Table +728011000000109,Infracardiac location of anomalous pulmonary venous connection to patent venous duct (disorder),n,via Query Table +369061000000108,Congenital dextroposition of heart ,n,via Query Table +619801000000107,Other specified endocardial cushion defects (disorder),n,via Query Table +307765003,[V]Presence of coronary artery bypass graft (situation),n,via Query Table +586391000000105,Other specified diagnostic transluminal operation on coronary artery (procedure),n,via Query Table +1033161000000102,Nonobstructive coronary atherosclerosis ,n,via Query Table +749821000000101,Heart failure with normal ejection fraction (disorder),n,via Query Table +727861000000103,Supracardiac location of anomalous pulmonary venous connection to right sided vertical vein (disorder),n,via Query Table +224151000000107,Biventricular repair of hypoplastic left heart syndrome (procedure),n,via Query Table +169761000000104,Heart and lung transplant,n,via Query Table +92520003,Canine intergrade cardiomyopathy (disorder),n,via Query Table +374241000000108,Heart failure screening invitation ,n,via Query Table +38811000000103,Coronary heart disease monitoring verbal invitation (finding),n,via Query Table +810691000000104,Right ventricular diastolic dysfunction (disorder),n,via Query Table +727511000000103,Hepatic vein to left atrium and right atrium (disorder),n,via Query Table +625741000000106,Coronary artery anomaly NOS (disorder),n,via Query Table +488621000000105,Aortopulmonary reconstruction with systemic to pulmonary arterial shunt ,n,via Query Table +501871000000106,[D]Cardiorespiratory failure (situation),n,via Query Table +683171000000106,Coronary artery by-pass anastomosis NOS (procedure),n,via Query Table +499461000000105,[D]Ascites (context-dependent category),n,via Query Table +586331000000109,Revision of transplantation of heart NEC (procedure),n,via Query Table +233671000000108,Percutaneous coronary balloon angioplasty and 3 or more stents into coronary artery NEC (procedure),n,via Query Table +461582000,Congenital luminal atresia of aortic arch (disorder),n,via Query Table +451021000000103,[X]Other congenital malformations of aorta (disorder),n,via Query Table +214621000000103,Transfer of care from paediatric congenital heart service,n,via Query Table +776261000000102,Referral to heart failure exercise programme declined ,n,via Query Table +939891000000107,Heart failure rehabilitation programme not available ,n,via Query Table +259791000000102,Percutaneous transluminal balloon angioplasty and stenting of coronary artery ,n,via Query Table +727881000000107,Supracardiac location of anomalous pulmonary venous connection to left superior vena cava (disorder),n,via Query Table +645721000000102,Benign hypertensive heart disease NOS (disorder),n,via Query Table +629861000000100,"Congenital mitral stenosis, unspecified (disorder)",n,via Query Table +727851000000101,Supracardiac location of anomalous pulmonary venous connection to left sided vertical vein (disorder),n,via Query Table +750131000000104,Continuity between mitral valve and pulmonary valve (disorder),n,via Query Table +728591000000108,Double outlet right ventricle with doubly committed ventricular septal defect and pulmonary stenosis (disorder),n,via Query Table +443751000000108,[X]Other hypertrophic cardiomyopathy (disorder),n,via Query Table +753541000000105,Divided left atrium with some pulmonary veins to proximal chamber draining to left atrium (disorder),n,via Query Table +630501000000105,Other rheumatic heart disease NOS (disorder),n,via Query Table +472770005,Acquired excessive restriction of ventricular septal defect (disorder),n,via Query Table +654281000000105,Other and unspecified rheumatic heart disease (disorder),n,via Query Table +236701000000102,Other specified other repair of transposition of great arteries (procedure),n,via Query Table +709801000000103,Coronary artery bypass graft operation planned ,n,via Query Table +727691000000108,Obstructed pulmonary venous connection due to extrinsic compression (disorder),n,via Query Table +516991000000107,Aortic orifice posterior left to pulmonary orifice (disorder),n,via Query Table +727131000000101,Ventricular imbalance with dominant right ventricle and hypoplastic left ventricle (disorder),n,via Query Table +726561000000103,Absent left sided atrioventricular connection - univentricular (disorder),n,via Query Table +594421000000105,Saphenous vein graft replacement coronary artery NOS (procedure),n,via Query Table +917871000000108,Angina self management plan commenced,n,via Query Table +727581000000105,Persistent common pulmonary vein (disorder),n,via Query Table +258861000000107,Repair of Fallot-type double outlet right ventricle ,n,via Query Table +538591000000105,Other correction of transposition of great vessels NOS (procedure),n,via Query Table +750151000000106,Discontinuity between mitral valve and pulmonary valve (disorder),n,via Query Table +516981000000105,Aortic orifice posterior to pulmonary orifice (disorder),n,via Query Table +233681000000105,Other specified percutaneous transluminal balloon angioplasty and stenting of coronary artery (procedure),n,via Query Table +812011000000100,Heart failure self-management plan agreed ,n,via Query Table +259101000000108,Relief of right ventricular outflow tract obstruction ,n,via Query Table +727141000000105,Right superior vena cava connecting to coronary sinus (disorder),n,via Query Table +232911000000102,Repair of tetralogy of Fallot with absent pulmonary valve (procedure),n,via Query Table +728281000000109,Absent ductus venosus with direct connection of umbilical vein to renal vein (disorder),n,via Query Table +188151000000107,Admit heart failure emergency,n,via Query Table +851531000000100,Heart failure clinical pathway ,n,via Query Table +517431000000102,Bifid apex of heart (disorder),n,via Query Table +38791000000104,Coronary heart disease monitoring 2nd letter (finding),n,via Query Table +765651000000100,Tachycardiomyopathy (disorder),n,via Query Table +274951000000109,Excepted from heart failure quality indicators: Informed dissent ,n,via Query Table +390661000000109,[X]Other congenital malformations of great veins (disorder),n,via Query Table +727681000000106,Obstructed pulmonary venous connection due to intrinsic narrowing (disorder),n,via Query Table +772261000000103,Creation of conduit between right ventricle of heart and pulmonary artery (procedure),n,via Query Table +398561000000108,[X]Other congenital malformations of aortic and mitral valves (disorder),n,via Query Table +526801000000103,Excepted from myocardial infarction quality indicators: patient unsuitable (finding),n,via Query Table +726651000000102,Double outlet right ventricle with intact ventricular septum (disorder),n,via Query Table +657531000000102,"Ventricular septal defect, unspecified (disorder)",n,via Query Table +727551000000104,Total anomalous pulmonary venous connection of infracardiac type (disorder),n,via Query Table +233998004,Coronary artery dissection (disorder),n,via Query Table +471531000000105,[X]Other forms of angina pectoris (disorder),n,via Query Table +259111000000105,Repair of double chambered right ventricle ,n,via Query Table +727791000000101,Anomalous pulmonary venous connection of mixed type with two pulmonary venous confluences (disorder),n,via Query Table +89801000000101,Excepted from CHD quality indicators: Informed dissent (administrative concept),n,via Query Table +175033000,Prosthetic replacement of four or more coronary arteries (procedure),n,via Query Table +175081007,Endarterectomy of coronary artery NEC (procedure),n,via Query Table +237271000000101,Aortic root replacement using pulmonary valve autograft with right ventricle to pulmonary artery valved conduit (procedure),n,via Query Table +692841000000100,"Endocardial cushion defects, unspecified (disorder)",n,via Query Table +237291000000102,Percutaneous transluminal balloon angioplasty and stenting of coronary artery NOS (procedure),n,via Query Table +684201000000105,Rheumatic endocarditis NOS (disorder),n,via Query Table +596331000000108,Connection of other thoracic artery to coronary artery NOS (procedure),n,via Query Table +728811000000101,Atrioventricular septal defect associated with tetralogy of Fallot (disorder),n,via Query Table +753491000000101,Divided left atrium with all pulmonary veins to proximal chamber without communication to left atrium with pulmonary venous chamber communication to right atrium (disorder),n,via Query Table +175025001,Allograft replacement of three coronary arteries (procedure),n,via Query Table +831761000000103,Coronary microvascular disease,n,via Query Table +259081000000102,Repair of univentricular heart NOS ,n,via Query Table +553051000000104,Other therapeutic transluminal operation on coronary artery NOS (procedure),n,via Query Table +727251000000102,Left superior vena cava persisting to right atrium and left atrium (disorder),n,via Query Table +727721000000104,Obstructed pulmonary venous connection due to extrinsic compression at diaphragm (disorder),n,via Query Table +251691000000105,Heart failure monitoring third letter ,n,via Query Table +274651000000103,Heart failure monitoring first letter ,n,via Query Table +207254005,[D]Ascites NOS (situation),n,via Query Table +632031000000106,Other specified ventricular septal defect (disorder),n,via Query Table +728301000000105,Congenital abnormality of right atrium (disorder),n,via Query Table +499471000000103,[D]Fluid in peritoneal cavity (context-dependent category),n,via Query Table +728131000000102,Coronary sinus drainage cephalad to left superior vena cava (disorder),n,via Query Table +707421000000103,History of myocardial infarction,n,via Query Table +33622007,Round heart disease (disorder),n,via Query Table +182131000000102,Fluoroscopic angiography of coronary artery and insertion of stent (procedure),n,via Query Table +37171002,Abnormal number of leaflets (disorder),n,via Query Table +727611000000104,Scimitar syndrome with additional anomalous pulmonary venous connection (disorder),n,via Query Table +251661000000104,Heart failure monitoring verbal invite ,n,via Query Table +726951000000108,Ebstein's anomaly of right atrioventricular valve in functionally univentricular heart (disorder),n,via Query Table +753581000000102,Divided left atrium with some pulmonary veins to proximal chamber draining to right atrium and others connecting directly to left atrium (disorder),n,via Query Table +84537008,Chronic ischemic heart disease (disorder),n,via Query Table +465021000000107,[X]Other forms of acute ischaemic heart disease (disorder),n,via Query Table +198868006,Cardiac failure following abortive pregnancy (disorder),n,via Query Table +676121000000106,Great vessel transposition NOS (disorder),n,via Query Table +175008003,Saphenous vein graft replacement of two coronary arteries (procedure),n,via Query Table +627251000000105,Other specified ostium secundum atrial septal defect (disorder),n,via Query Table +208051000000107,Heart failure review completed,n,via Query Table +538881000000105,Repair of coronary artery NEC (procedure),n,via Query Table +427608000,Left ventricular noncompaction (disorder),n,via Query Table +211371000000105,Insertion of drug-eluting coronary artery stent,n,via Query Table +728411000000103,Divided left atrium with restrictive outlet of proximal chamber to left atrium (disorder),n,via Query Table +253702009,Variant coronary origin from right sinus (disorder),n,via Query Table +175030002,Prosthetic replacement of one coronary artery (procedure),n,via Query Table +259801000000103,Percutaneous transluminal balloon angioplasty and insertion of 1-2 drug eluting stents into coronary artery ,n,via Query Table +175007008,Saphenous vein graft replacement of one coronary artery (procedure),n,via Query Table +589921000000100,Autograft replacement of four of more coronary arteries NEC (procedure),n,via Query Table +753231000000103,Descending aorta anterior and same side as azygos vein with absent inferior vena cava (disorder),n,via Query Table +599281000000106,Hypertensive heart and renal disease NOS (disorder),n,via Query Table +214151000000100,Myocardial bridge of coronary artery,n,via Query Table +593631000000107,Rheumatic pulmonary valve disease NOS (disorder),n,via Query Table +639641000000102,Cardiomyopathy due to drugs and other external agents (disorder),n,via Query Table +251671000000106,Heart failure monitoring first letter ,n,via Query Table +727561000000101,Total anomalous pulmonary venous connection of mixed type (disorder),n,via Query Table +532881000000107,Other specified repair of coronary artery (procedure),n,via Query Table +208091000000104,Heart failure care plan discussed with patient,n,via Query Table +207553000,[D]Cardiorespiratory failure (situation),n,via Query Table +34644005,True posterior wall infarction (disorder),n,via Query Table +412781000000102,[X]Subsequent myocardial infarction of unspecified site,n,via Query Table +726971000000104,Abnormal attachment of tricuspid chordae tendinae (disorder),n,via Query Table +512751000000100,History of myocardial infarction (situation),n,via Query Table +727031000000100,Malattachment of atrial septum (disorder),n,via Query Table +286948009,Rheumatic mitral stenosis with insufficiency (disorder),n,via Query Table +65181009,Electrocardiogram finding of infarction (finding),n,via Query Table +259351000000106,Aortic root replacement using pulmonary valve autograft with right ventricle to pulmonary artery valved conduit and aortoventriculoplasty ,n,via Query Table +471851000000100,[X]Acute transmural myocardial infarction of unspecified site,n,via Query Table +728171000000100,Congenital abnormality of anterior cardiac vein (disorder),n,via Query Table +258601000000109,Repair of Fallot-type pulmonary atresia with aortopulmonary collaterals ,n,via Query Table +727671000000109,Alveolar capillary dysplasia with pulmonary venous misalignment (disorder),n,via Query Table +599261000000102,Hypertensive heart disease NOS (disorder),n,via Query Table +915581000000100,On optimal heart failure therapy ,n,via Query Table +466061000000109,[X]Cardiomyopathy in infectious and parasitic diseases classified elsewhere (disorder),n,via Query Table +463141000000100,[X]Other specified congenital malformations of the heart (disorder),n,via Query Table +259341000000108,Aortic root replacement using pulmonary valve autograft with right ventricle to pulmonary artery valved conduit ,n,via Query Table +728871000000106,Anomalous pulmonary to systemic collateral vein (disorder),n,via Query Table +727651000000100,Partial anomalous pulmonary venous connection of part of left lung (disorder),n,via Query Table +526731000000103,Exception reporting: myocardial infarction quality indicators ,n,via Query Table +440211000000107,[X]Other congenital malformations of tricuspid valve (disorder),n,via Query Table +407606009,New York Heart Association classification - class II (assessment scale),n,via Query Table +728831000000109,Functionally univentricular heart (disorder),n,via Query Table +195547003,[X]Subsequent myocardial infarction of unspecified site (disorder),n,via Query Table +831771000000105,Right ventricular diastolic dysfunction,n,via Query Table +274631000000105,Heart failure monitoring telephone invite ,n,via Query Table +727211000000101,Left superior vena cava persisting to coronary sinus (disorder),n,via Query Table +595991000000104,Other specified other transplantation of heart (procedure),n,via Query Table +810701000000104,Diastolic dysfunction (disorder),n,via Query Table +614141000000100,Total anomalous pulmonary venous return NOS (disorder),n,via Query Table +713201000000103,Congenital abnormality of tricuspid chordae tendinae (disorder),n,via Query Table +492061000000108,Repair of total anomalous pulmonary venous connection by coronary sinus cutback to oval fossa with direct anastomosis of pulmonary venous confluence to left atrium (procedure),n,via Query Table +636881000000100,Auricular septal defect NOS (disorder),n,via Query Table +752211000000103,Percutaneous transluminal atherectomy of coronary artery by rotary cutter using fluoroscopic guidance (procedure),n,via Query Table +194815007,Aborted myocardial infarction (disorder),n,via Query Table +727121000000103,Ventricular imbalance with dominant left ventricle and hypoplastic right ventricle (disorder),n,via Query Table +492041000000107,Repair of total anomalous pulmonary venous connection by interatrial baffle (procedure),n,via Query Table +62675008,Repair of arteriovenous fistula of coronary artery by ligation (procedure),n,via Query Table +417023008,Stent fracture (disorder),n,via Query Table +491591000000102,Repair of total anomalous pulmonary venous connection to right atrium (procedure),n,via Query Table +224101000000106,Repair of univentricular heart (procedure),n,via Query Table +562871000000103,Transposition of coronary artery NEC (procedure),n,via Query Table +639401000000103,Other chronic pulmonary heart disease (disorder),n,via Query Table +233651000000104,Percutaneous transluminal balloon angioplasty and insertion of 3 or more drug eluting stents into coronary artery (procedure),n,via Query Table +232901000000104,Repair of tetralogy of Fallot using transannular patch (procedure),n,via Query Table +536991000000102,Replacement of coronary artery NOS (procedure),n,via Query Table +596021000000109,Other specified correction of tetralogy of Fallot (procedure),n,via Query Table +727501000000100,Hepatic vein to left sided atrium (disorder),n,via Query Table +727731000000102,Obstructed pulmonary venous connection at interatrial communication (disorder),n,via Query Table +224311000000105,Atrial switch and arterial switch (procedure),n,via Query Table +814001000000106,Education about deteriorating heart failure ,n,via Query Table +582911000000104,Other specified operations on coronary artery (procedure),n,via Query Table +521701000000100,Heart failure resolved ,n,via Query Table +492761000000105,Repair of total anomalous pulmonary venous connection by creation of left neo-atrium with pericardial roof (procedure),n,via Query Table +443284001,Common cardiac atrium (morphologic abnormality),n,via Query Table +259061000000106,Conversion of atrial pulmonary anastomosis to total pulmonary connection ,n,via Query Table +286731000000104,Review of patient at risk from coronary heart disease ,n,via Query Table +236711000000100,Other repair of transposition of great arteries NOS (procedure),n,via Query Table +198731000000102,Myocardial bridge of coronary artery (disorder),n,via Query Table +208061000000105,Heart failure review completed,n,via Query Table +778201000000100,Tachycardia-induced cardiomyopathy,n,via Query Table +728311000000107,Prolapse of Eustachian valve through tricuspid valve (disorder),n,via Query Table +175024002,Allograft replacement of two coronary arteries (procedure),n,via Query Table +381171000000101,Excepted from cardiovascular disease quality indicators: informed dissent (administrative concept),n,via Query Table +373139003,Aneurysmal lesion of coronary artery (finding),n,via Query Table +841991000000106,Percutaneous coronary intervention ,n,via Query Table +258591000000103,Repair of tetralogy of Fallot with absent pulmonary valve ,n,via Query Table +526791000000102,Excepted from myocardial infarction quality indicators: informed dissent ,n,via Query Table +251951000000108,Exception reporting: heart failure quality indicators ,n,via Query Table +581531000000106,Posterior myocardial infarction NOS (disorder),n,via Query Table +41702007,Coronary atherosclerosis (disorder),n,via Query Table +586351000000102,Other transplantation of heart (procedure),n,via Query Table +20606002,Acute bovine pulmonary emphysema AND edema (disorder),n,via Query Table +727591000000107,Pulmonary venous hypoplasia (disorder),n,via Query Table diff --git a/codelists/opensafely-chronic-kidney-disease-snomed.csv b/codelists/opensafely-chronic-kidney-disease-snomed.csv new file mode 100644 index 0000000..c573c75 --- /dev/null +++ b/codelists/opensafely-chronic-kidney-disease-snomed.csv @@ -0,0 +1,407 @@ +id,name,active,notes +238318009,Continuous ambulatory peritoneal dialysis (procedure),y,direct mapping +864311000000105,Thrombosis of vein of transplanted kidney (disorder),y,direct mapping +865861000000101,Stenosis of dialysis arteriovenous shunt (disorder),y,direct mapping +236538004,Acute disorder of hemodialysis (disorder),y,direct mapping +276983001,Percutaneous embolectomy of arteriovenous fistula (procedure),y,direct mapping +71192002,Peritoneal dialysis (procedure),y,direct mapping +866991000000105,Haemorrhage of dialysis arteriovenous graft (disorder),y,direct mapping +236566007,Extrusion of peritoneal dialysis catheter cuff (disorder),y,direct mapping +866951000000102,Infection of dialysis arteriovenous shunt (disorder),y,direct mapping +278691000,Procedure related to surgical arteriovenous connection (procedure),y,direct mapping +236565006,Poor drainage of peritoneal dialysis catheter (disorder),y,direct mapping +233580005,Continuous venovenous hemodialysis (procedure),y,direct mapping +236571000,Hyperacute rejection of renal transplant (disorder),y,direct mapping +175901007,Live donor renal transplant (procedure),y,direct mapping +236589004,Transplant glomerulopathy - late form (disorder),y,direct mapping +236567003,Misplacement of acute peritoneal dialysis catheter (disorder),y,direct mapping +233578004,Continuous hemodialysis (procedure),y,direct mapping +844661000000109,Vascular complication of renal transplant (disorder),y,direct mapping +216933008,Failure of sterile precautions during kidney dialysis (event),y,direct mapping +236564005,Omental wrapping around peritoneal dialysis catheter (disorder),y,direct mapping +847791000000101,Rupture of artery of transplanted kidney (disorder),y,direct mapping +238316008,Aspiration of chronic ambulatory peritoneal dialysis catheter (procedure),y,direct mapping +233576000,Intermittent hemodialysis with sequential ultrafiltration (procedure),y,direct mapping +276883000,Peritoneal dialysis-associated peritonitis (disorder),y,direct mapping +19765000,Complication of dialysis (disorder),y,direct mapping +233577009,Intermittent hemodialysis with continuous ultrafiltration (procedure),y,direct mapping +233583007,Continuous hemofiltration (procedure),y,direct mapping +87235005,Dialysis disequilibrium syndrome (disorder),y,direct mapping +236579003,Chronic rejection of renal transplant - grade 1 (disorder),y,direct mapping +233469007,Creation brachiocephalic fistula (procedure),y,direct mapping +236551009,Underdialysis (disorder),y,direct mapping +236558003,Peritoneal dialysis catheter tunnel infection (disorder),y,direct mapping +236562009,Obstruction of peritoneal dialysis catheter (disorder),y,direct mapping +236570004,Renal transplant rejection (disorder),y,direct mapping +288182009,Extracorporeal kidney (procedure),y,direct mapping +846761000000109,Aneurysm of needle site of dialysis arteriovenous fistula (disorder),y,direct mapping +180273006,Removal of chronic ambulatory peritoneal dialysis catheter (procedure),y,direct mapping +233495009,Exploration of arteriovenous fistula (procedure),y,direct mapping +233482004,Procedure on intraluminal device of arteriovenous fistula (procedure),y,direct mapping +233592005,Plasma filtration (procedure),y,direct mapping +236138007,Xenograft renal transplant (procedure),y,direct mapping +233581009,Hemofiltration (procedure),y,direct mapping +236576005,Acute rejection of renal transplant - grade II (disorder),y,direct mapping +238315007,Adjustment of chronic ambulatory peritoneal dialysis catheter (procedure),y,direct mapping +865781000000101,Infection of dialysis vascular access (disorder),y,direct mapping +216932003,Failure of sterile precautions during perfusion (event),y,direct mapping +233491000,Banding of arteriovenous fistula (procedure),y,direct mapping +843691000000100,Urological complication of renal transplant (disorder),y,direct mapping +427053002,Extracorporeal albumin hemodialysis (procedure),y,direct mapping +233585000,Continuous venovenous hemofiltration (procedure),y,direct mapping +236584009,Perfusion injury of renal transplant (disorder),y,direct mapping +872481000000106,Stenosis of venous side of dialysis arteriovenous shunt (disorder),y,direct mapping +233483009,Insertion of intraluminal device into arteriovenous fistula (procedure),y,direct mapping +216878005,"Accidental cut, puncture, perforation or hemorrhage during kidney dialysis (disorder)",y,direct mapping +182753006,Intestinal dialysis (procedure),y,direct mapping +70536003,Transplant of kidney (procedure),y,direct mapping +302497006,Hemodialysis (procedure),y,direct mapping +180277007,Insertion of temporary peritoneal dialysis catheter (procedure),y,direct mapping +233476002,Angioplasty of arteriovenous fistula (procedure),y,direct mapping +866041000000104,Occlusion of dialysis arteriovenous graft (disorder),y,direct mapping +236578006,Chronic rejection of renal transplant (disorder),y,direct mapping +233496005,Exploration of arteriovenous graft (procedure),y,direct mapping +175873005,Declotting of thigh vein loop (procedure),y,direct mapping +865981000000103,Thrombosis of dialysis arteriovenous graft (disorder),y,direct mapping +866061000000103,Occlusion of dialysis arteriovenous fistula (disorder),y,direct mapping +233587008,Intermittent hemodiafiltration (procedure),y,direct mapping +233484003,Insertion of stent into arteriovenous fistula (procedure),y,direct mapping +182750009,Ultrafiltration (procedure),y,direct mapping +236546003,Aluminum intoxication (disorder),y,direct mapping +236552002,Adynamic bone disease (disorder),y,direct mapping +161665007,History of renal transplant (situation),y,direct mapping +236588007,Transplant glomerulopathy - early form (disorder),y,direct mapping +238314006,Renewal of chronic ambulatory peritoneal dialysis catheter (procedure),y,direct mapping +236549005,Aluminum-related fracturing osteodystrophy (disorder),y,direct mapping +105502003,Dependence on renal dialysis (finding),y,direct mapping +236556004,Bloodstained peritoneal dialysis effluent (disorder),y,direct mapping +238321006,Intermittent peritoneal dialysis (procedure),y,direct mapping +846731000000104,Aneurysm of dialysis arteriovenous fistula (disorder),y,direct mapping +238322004,Tidal peritoneal dialysis (procedure),y,direct mapping +438546008,Ligation of arteriovenous dialysis fistula (procedure),y,direct mapping +225230008,Chronic peritoneal dialysis (procedure),y,direct mapping +180272001,Insertion of chronic ambulatory peritoneal dialysis catheter (procedure),y,direct mapping +265763003,Compensation for renal failure (procedure),y,direct mapping +27929005,Arteriovenous fistulization (procedure),y,direct mapping +233575001,Intermittent hemodialysis (procedure),y,direct mapping +32599008,Hemodialysis-associated amyloidosis (disorder),y,direct mapping +175779004,Attention to arteriovenous shunt (procedure),y,direct mapping +233579007,Continuous arteriovenous hemodialysis (procedure),y,direct mapping +846671000000106,Aneurysm of superficialised artery of dialysis arteriovenous fistula (disorder),y,direct mapping +238319001,Continuous cycling peritoneal dialysis (procedure),y,direct mapping +269698004,Mechanical failure of instrument or apparatus during kidney dialysis (event),y,direct mapping +225231007,Stab peritoneal dialysis (procedure),y,direct mapping +236436003,End stage renal failure with renal transplant (disorder),y,direct mapping +867011000000102,Haemorrhage of dialysis arteriovenous fistula (disorder),y,direct mapping +865761000000105,Occlusion of dialysis vascular access (disorder),y,direct mapping +175777002,Insertion of arteriovenous prosthesis (procedure),y,direct mapping +236548002,Aluminum-related osteomalacia (disorder),y,direct mapping +711411006,Allotransplantation of kidney from beating heart cadaver (procedure),y,direct mapping +236563004,Migration of peritoneal dialysis catheter (disorder),y,direct mapping +108241001,Dialysis procedure (procedure),y,direct mapping +233480007,Embolectomy of arteriovenous fistula (procedure),y,direct mapping +236583003,Failed renal transplant (disorder),y,direct mapping +847881000000107,Stenosis of vein of transplanted kidney (disorder),y,direct mapping +430332005,Infection of arteriovenous graft for hemodialysis (disorder),y,direct mapping +852981000000100,Aneurysm of vein of transplanted kidney (disorder),y,direct mapping +233477006,Thrombolysis of arteriovenous fistula (procedure),y,direct mapping +864271000000105,Thrombosis of artery of transplanted kidney (disorder),y,direct mapping +846461000000102,Ruptured aneurysm of dialysis vascular access (disorder),y,direct mapping +233481006,Embolectomy of arteriovenous graft (procedure),y,direct mapping +866001000000102,Thrombosis of dialysis arteriovenous fistula (disorder),y,direct mapping +236577001,Acute rejection of renal transplant - grade III (disorder),y,direct mapping +277011002,Pre-existing disease in renal transplant (disorder),y,direct mapping +847811000000100,Rupture of vein of transplanted kidney (disorder),y,direct mapping +175780001,Removal of infected arteriovenous shunt (procedure),y,direct mapping +233582002,Intermittent hemofiltration (procedure),y,direct mapping +282348002,Acquired renal arteriovenous fistula (disorder),y,direct mapping +438548009,Ligation of arteriovenous dialysis graft (procedure),y,direct mapping +867051000000103,Rupture of dialysis arteriovenous graft (disorder),y,direct mapping +711413009,Allotransplantation of kidney from non-beating heart cadaver (procedure),y,direct mapping +236539007,First use syndrome of dialysis (disorder),y,direct mapping +236580000,Chronic rejection of renal transplant - grade II (disorder),y,direct mapping +82801007,Removal of arteriovenous shunt device (procedure),y,direct mapping +271418008,Chronic ambulatory peritoneal dialysis catheter procedure (procedure),y,direct mapping +88351001,Hypercalcemia associated with chronic dialysis (disorder),y,direct mapping +251859005,Dialysis finding (finding),y,direct mapping +175788008,Ligation of acquired arteriovenous fistula (procedure),y,direct mapping +236543006,Beta-2 microglobulin arthropathy (disorder),y,direct mapping +233468004,Creation of Cimino fistula (procedure),y,direct mapping +236575009,Acute rejection of renal transplant - grade I (disorder),y,direct mapping +236555000,Pain during outflow of dialysate (disorder),y,direct mapping +427992007,Removal of thrombus of arteriovenous fistula (procedure),y,direct mapping +233485002,Removal of intraluminal device from arteriovenous fistula (procedure),y,direct mapping +865841000000102,Stenosis of dialysis arteriovenous graft (disorder),y,direct mapping +236435004,End stage renal failure on dialysis (disorder),y,direct mapping +233478001,Thrombolysis of arteriovenous graft (procedure),y,direct mapping +872461000000102,Stenosis of arterial side of dialysis arteriovenous shunt (disorder),y,direct mapping +238323009,Night-time intermittent peritoneal dialysis (procedure),y,direct mapping +276998004,Percutaneous thrombolysis of arteriovenous fistula (procedure),y,direct mapping +236557008,Peritoneal dialysis catheter exit site infection (disorder),y,direct mapping +236573002,Very mild acute rejection of renal transplant (disorder),y,direct mapping +265538001,Repair of acquired arteriovenous fistula (procedure),y,direct mapping +865801000000100,Haemorrhage of dialysis vascular access (disorder),y,direct mapping +236540009,Anaphylactoid reaction to dialysis (disorder),y,direct mapping +854131000000107,Thrombus in peritoneal dialysis catheter (disorder),y,direct mapping +854161000000102,Anaphylactoid reaction due to haemodialysis (disorder),y,direct mapping +236569000,Primary non-function of renal transplant (disorder),y,direct mapping +33461007,Complication of peritoneal dialysis (disorder),y,direct mapping +238317004,Flushing of chronic ambulatory peritoneal dialysis catheter (procedure),y,direct mapping +233590002,Continuous venovenous hemodiafiltration (procedure),y,direct mapping +276897008,Percutaneous balloon angioplasty of arteriovenous fistula (procedure),y,direct mapping +846801000000104,Aneurysm of anastomotic site of dialysis arteriovenous fistula (disorder),y,direct mapping +233487005,Adjustment of intraluminal device of arteriovenous fistula (procedure),y,direct mapping +236544000,Matrix stone formation of dialysis (disorder),y,direct mapping +236574008,Acute rejection of renal transplant (disorder),y,direct mapping +236559006,Loss of ultrafiltration (disorder),y,direct mapping +236547007,Aluminum bone disease (disorder),y,direct mapping +236561002,Disorder of peritoneal dialysis catheter (disorder),y,direct mapping +233589006,Continuous arteriovenous hemodiafiltration (procedure),y,direct mapping +175902000,Cadaveric renal transplant (procedure),y,direct mapping +233584001,Continuous arteriovenous hemofiltration (procedure),y,direct mapping +853651000000105,Thrombosis of dialysis vascular access (disorder),y,direct mapping +236581001,Chronic rejection of renal transplant - grade III (disorder),y,direct mapping +426340003,Creation of graft fistula for dialysis (procedure),y,direct mapping +313030004,Donor renal transplantation (procedure),y,direct mapping +233486001,Removal of stent from arteriovenous fistula (procedure),y,direct mapping +853631000000103,Stenosis of dialysis vascular access (disorder),y,direct mapping +236614007,Perirenal and periureteric post-transplant lymphocele (disorder),y,direct mapping +449288005,Infection of arteriovenous fistula for hemodialysis (disorder),y,direct mapping +236542001,Long-term disorder of dialysis (disorder),y,direct mapping +236554001,Pain during inflow of dialysate (disorder),y,direct mapping +233588003,Continuous hemodiafiltration (procedure),y,direct mapping +853021000000108,Aneurysm of artery of transplanted kidney (disorder),y,direct mapping +236582008,Acute-on-chronic rejection of renal transplant (disorder),y,direct mapping +236587002,Transplant glomerulopathy (disorder),y,direct mapping +236434000,End stage renal failure untreated by renal replacement therapy (disorder),y,direct mapping +866021000000106,Thrombosis of dialysis arteriovenous shunt (disorder),y,direct mapping +866081000000107,Occlusion of dialysis arteriovenous shunt (disorder),y,direct mapping +265764009,Renal dialysis (procedure),y,direct mapping +236550005,Polyserositis syndrome of dialysis (disorder),y,direct mapping +236560001,Loss of solute clearance (disorder),y,direct mapping +236572007,Accelerated rejection of renal transplant (disorder),y,direct mapping +277010001,Unexplained episode of renal transplant dysfunction (disorder),y,direct mapping +129214009,Acquired arteriovenous fistula (morphologic abnormality),y,direct mapping +233586004,Hemodiafiltration (procedure),y,direct mapping +429451003,Disorder related to renal transplantation (disorder),y,direct mapping +46177005,End-stage renal disease (disorder),y,direct mapping +699235009,Continuous ambulatory peritoneal dialysis associated peritonitis (disorder),y,direct mapping +233488000,Adjustment of arteriovenous fistula stent (procedure),y,direct mapping +867031000000105,Haemorrhage of dialysis arteriovenous shunt (disorder),y,direct mapping +428648006,Automated peritoneal dialysis (procedure),y,direct mapping +236541008,Hyperchloremic acidosis associated with dialysis (disorder),y,direct mapping +715743002,Emergency hemofiltration (procedure),y,descendant of concept mapped from leaf +708931003,Maintenance hemodialysis (procedure),y,descendant of concept mapped from leaf +381000124105,Increase dialyzer size for hemodialysis (procedure),y,descendant of concept mapped from leaf +765479007,Allotransplantation of right kidney (procedure),y,descendant of concept mapped from leaf +73257006,Peritoneal dialysis catheter maintenance (procedure),y,descendant of concept mapped from leaf +233595007,Intravenous gas exchange (procedure),y,descendant of concept mapped from leaf +473397008,Dialysis catheter in situ usable (finding),y,descendant of concept mapped from leaf +405331002,Creation of upper limb arteriovenous fistula (procedure),y,descendant of concept mapped from leaf +57274006,Initial hemodialysis (procedure),y,descendant of concept mapped from leaf +68341005,"Hemodialysis, supervision at home (procedure)",y,descendant of concept mapped from leaf +233574002,Extracorporeal carbon dioxide removal (procedure),y,descendant of concept mapped from leaf +708933000,Emergency hemodiafiltration (procedure),y,descendant of concept mapped from leaf +443143006,Dependence on hemodialysis (finding),y,descendant of concept mapped from leaf +300478000,Finding of measures of dialysis (finding),y,descendant of concept mapped from leaf +699070001,Repair of acquired femoral arteriovenous fistula (procedure),y,descendant of concept mapped from leaf +431873008,Peritonitis due to infected peritoneal dialysis catheter (disorder),y,descendant of concept mapped from leaf +331000124109,Hemodialysis finding (finding),y,descendant of concept mapped from leaf +405419000,Creation of lower limb arteriovenous fistula (procedure),y,descendant of concept mapped from leaf +698074000,Sustained low-efficiency dialysis (procedure),y,descendant of concept mapped from leaf +14130001000004103,Aquapheresis (procedure),y,descendant of concept mapped from leaf +719501003,Ultrafiltration failure (disorder),y,descendant of concept mapped from leaf +676002,Peritoneal dialysis including cannulation (procedure),y,descendant of concept mapped from leaf +11000771000119104,Dependence on continuous cycling peritoneal dialysis (finding),y,descendant of concept mapped from leaf +14684005,Peritoneal dialysis excluding cannulation (procedure),y,descendant of concept mapped from leaf +11932001,Stabilizing hemodialysis (procedure),y,descendant of concept mapped from leaf +704667004,Hypertension concurrent and due to end stage renal disease on dialysis (disorder),y,descendant of concept mapped from leaf +765478004,Allotransplantation of left kidney (procedure),y,descendant of concept mapped from leaf +621000124102,Non-compliance with analysis of peritoneal dialysate (finding),y,descendant of concept mapped from leaf +90791000119104,End stage renal disease on dialysis due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +704308002,Difficulty managing peritoneal dialysis (finding),y,descendant of concept mapped from leaf +708930002,Maintenance hemodiafiltration (procedure),y,descendant of concept mapped from leaf +90771000119100,End stage renal disease on dialysis due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +233573008,Extracorporeal membrane oxygenation (procedure),y,descendant of concept mapped from leaf +429075005,Dependence on dialysis due to end stage renal disease (finding),y,descendant of concept mapped from leaf +127991000119101,Hypertension concurrent and due to end stage renal disease on dialysis due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +461000124106,Increase in hemodialysis dialyzer size (finding),y,descendant of concept mapped from leaf +844011000000103,Arteriovenous extracorporeal carbon dioxide removal (procedure),y,descendant of concept mapped from leaf +251869004,Adequacy of hemodialysis (finding),y,descendant of concept mapped from leaf +442326005,Cloudy peritoneal dialysis effluent (finding),y,descendant of concept mapped from leaf +440597004,Obstruction of peritoneal dialysis catheter by fibrin formation (disorder),y,descendant of concept mapped from leaf +431000124102,Hemodialysis access site non-patent (finding),y,descendant of concept mapped from leaf +341000124104,Peritoneal dialysis finding (finding),y,descendant of concept mapped from leaf +444887005,Inadequate flow to support prescribed dialysis blood flow (finding),y,descendant of concept mapped from leaf +702635003,Inadequate hemodialysis (disorder),y,descendant of concept mapped from leaf +78922001,Repair of acquired or traumatic arteriovenous fistula of extremity (procedure),y,descendant of concept mapped from leaf +34897002,"Hemodialysis, maintenance in hospital (procedure)",y,descendant of concept mapped from leaf +232999000,Insertion of valve into vena cava (procedure),y,descendant of concept mapped from leaf +3257008,Empty and measure peritoneal dialysis fluid (procedure),y,descendant of concept mapped from leaf +451000124109,Increase in hemodialysis blood flow (finding),y,descendant of concept mapped from leaf +571000124100,Requires additional education about peritoneal dialysis (finding),y,descendant of concept mapped from leaf +581000124102,Complies with collection of peritoneal dialysate specimen (finding),y,descendant of concept mapped from leaf +233572003,Extracorporeal gas exchange (procedure),y,descendant of concept mapped from leaf +251285001,Extracorporeal gas exchange finding (finding),y,descendant of concept mapped from leaf +473193004,Mode of dialysis access by patient choice (finding),y,descendant of concept mapped from leaf +428937001,Dependence on peritoneal dialysis due to end stage renal disease (finding),y,descendant of concept mapped from leaf +471000124104,Increase in hemodialysis session time (finding),y,descendant of concept mapped from leaf +611000124105,Non-compliance with collection of peritoneal dialysate specimen (finding),y,descendant of concept mapped from leaf +601000124107,Inadequate monitoring of dose delivery of peritoneal dialysis (finding),y,descendant of concept mapped from leaf +443596009,Dependence on peritoneal dialysis (finding),y,descendant of concept mapped from leaf +175899003,Autotransplantation of kidney (procedure),y,descendant of concept mapped from leaf +213150003,Kidney transplant failure and rejection (disorder),y,descendant of concept mapped from leaf +591000124104,Complies with analysis of peritoneal dialysate (finding),y,descendant of concept mapped from leaf +341939001,Extracorporeal hemofiltration (procedure),y,descendant of concept mapped from leaf +708934006,Maintenance hemofiltration (procedure),y,descendant of concept mapped from leaf +182749009,Extracorporeal blood irradiation (procedure),y,descendant of concept mapped from leaf +365399009,Finding of adequacy of dialysis (finding),y,descendant of concept mapped from leaf +473398003,Dialysis catheter in situ unusable (finding),y,descendant of concept mapped from leaf +125141000119102,Non-compliance with renal dialysis (finding),y,descendant of concept mapped from leaf +286371000119107,Malignant hypertensive end stage renal disease on dialysis (disorder),y,descendant of concept mapped from leaf +708932005,Emergency hemodialysis (procedure),y,descendant of concept mapped from leaf +11000731000119102,Dependence on continuous ambulatory peritoneal dialysis (finding),y,descendant of concept mapped from leaf +128001000119105,Hypertension concurrent and due to end stage renal disease on dialysis due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +428982002,Dependence on hemodialysis due to end stage renal disease (finding),y,descendant of concept mapped from leaf +406168002,Dialysis access maintenance (regime/therapy),y,descendant of concept mapped from leaf +67970008,"Hemodialysis, maintenance at home (procedure)",y,descendant of concept mapped from leaf +702634004,Inadequate peritoneal dialysis (disorder),y,descendant of concept mapped from leaf +441000124107,Hemodialysis access site patent (finding),y,descendant of concept mapped from leaf +714749008,Continuous renal replacement therapy (procedure),y,descendant of concept mapped from leaf +855161000000103,Beta-2 microglobulin amyloidosis,n,via Query Table +866011000000100,Thrombosis of dialysis arteriovenous fistula ,n,via Query Table +266901000000105,Haemofiltration ,n,via Query Table +844671000000102,Vascular complication of renal transplant ,n,via Query Table +366961000000102,Renal transplant recipient (finding),n,via Query Table +856221000000106,Aneurysm of needle site of dialysis arteriovenous fistula,n,via Query Table +260981000000102,Banding of arteriovenous fistula ,n,via Query Table +244811000000102,Allotransplantation of kidney from cadaver NEC (procedure),n,via Query Table +523481000000103,Dialysis catheter in situ unusable (finding),n,via Query Table +857581000000107,Bloodstained peritoneal dialysis effluent,n,via Query Table +316054003,[V]Kidney transplanted (situation),n,via Query Table +866741000000102,Infection of dialysis arteriovenous graft (disorder),n,via Query Table +856931000000103,Unexplained episode of renal transplant dysfunction,n,via Query Table +1050711000000105,Dependence on renal dialysis,n,via Query Table +834931000000108,Accelerated rejection of renal transplant,n,via Query Table +467521000000106,[X]Other dialysis (context-dependent category),n,via Query Table +219601000000106,End stage renal disease,n,via Query Table +622431000000104,Other specified transplantation of kidney (procedure),n,via Query Table +236568008,Renal transplant disorder (disorder),n,via Query Table +523471000000100,Dialysis catheter in situ usable (finding),n,via Query Table +327751000000105,Fluoroscopy guided percutaneous thrombolysis of dialysis fistula (procedure),n,via Query Table +225371000000104,Creation of graft fistula for dialysis (procedure),n,via Query Table +856201000000102,Aneurysm of superficialised artery of dialysis arteriovenous fistula,n,via Query Table +847891000000109,Stenosis of vein of transplanted kidney ,n,via Query Table +640091000000107,Other specified compensation for renal failure (procedure),n,via Query Table +404471000000102,[X]Failure of sterile precautions during kidney dialysis or other perfusion (finding),n,via Query Table +856191000000104,Ruptured aneurysm of dialysis vascular access,n,via Query Table +364571000000105,Leakage of peritoneal dialysate into subcutaneous tissue of abdominal wall (disorder),n,via Query Table +866051000000101,Occlusion of dialysis arteriovenous graft ,n,via Query Table +866961000000104,Infection of dialysis arteriovenous shunt ,n,via Query Table +853661000000108,Thrombosis of dialysis vascular access ,n,via Query Table +876311000000107,Percutaneous balloon angioplasty of arteriovenous fistula,n,via Query Table +855901000000104,Thrombus in peritoneal dialysis catheter,n,via Query Table +780091000000107,Flushing of chronic ambulatory peritoneal dialysis catheter,n,via Query Table +865851000000104,Stenosis of dialysis arteriovenous graft ,n,via Query Table +843701000000100,Urological complication of renal transplant ,n,via Query Table +398481000000100,[V]Preparatory care for dialysis (situation),n,via Query Table +640081000000105,Hemodialysis NEC (procedure),n,via Query Table +853641000000107,Stenosis of dialysis vascular access ,n,via Query Table +866761000000101,Infection of dialysis arteriovenous fistula (disorder),n,via Query Table +342071000000104,Ligation of arteriovenous dialysis fistula (procedure),n,via Query Table +640141000000101,Placement of other apparatus for compensation for renal failure (procedure),n,via Query Table +864281000000107,Thrombosis of artery of transplanted kidney ,n,via Query Table +233181000000101,Peritoneal dialysis NEC (procedure),n,via Query Table +864321000000104,Thrombosis of vein of transplanted kidney ,n,via Query Table +266921000000101,Continuous ambulatory peritoneal dialysis ,n,via Query Table +856691000000107,Chronic rejection of renal transplant - grade 1,n,via Query Table +855271000000103,Very mild acute rejection of renal transplant,n,via Query Table +231691000000106,"Allotransplantation of kidney from cadaver, heart non-beating (procedure)",n,via Query Table +231631000000105,Automated peritoneal dialysis (procedure),n,via Query Table +399241000000100,[V]Kidney transplanted (context-dependent category),n,via Query Table +855091000000105,Aluminium-related fracturing osteodystrophy,n,via Query Table +637691000000101,Placement of other apparatus for compensation for renal failure NOS (procedure),n,via Query Table +261001000000101,Creation of graft fistula for dialysis ,n,via Query Table +830901000000105,Acute rejection of renal transplant - grade III,n,via Query Table +872491000000108,Stenosis of venous side of dialysis arteriovenous shunt ,n,via Query Table +364591000000109,Leakage of peritoneal dialysate into pleural cavity (disorder),n,via Query Table +523461000000107,Patient choice of dialysis access (finding),n,via Query Table +288004005,Kidney replacement (disorder),n,via Query Table +867061000000100,Rupture of dialysis arteriovenous graft ,n,via Query Table +231721000000102,"Allotransplantation of kidney from cadaver, heart-beating (procedure)",n,via Query Table +866031000000108,Thrombosis of dialysis arteriovenous shunt ,n,via Query Table +830871000000105,Acute-on-chronic rejection of renal transplant,n,via Query Table +260991000000100,Thrombectomy of arteriovenous fistula ,n,via Query Table +643501000000102,Failure of sterile precautions during other perfusion (event),n,via Query Table +225441000000104,Thrombectomy of arteriovenous fistula (procedure),n,via Query Table +643511000000100,Failure of sterile precautions during perfusion NOS (event),n,via Query Table +865871000000108,Stenosis of dialysis arteriovenous fistula ,n,via Query Table +853031000000105,Aneurysm of artery of transplanted kidney ,n,via Query Table +855951000000103,Beta-2 microglobulin arthropathy,n,via Query Table +856211000000100,Aneurysm of dialysis arteriovenous fistula,n,via Query Table +637681000000103,Other specified placement of other apparatus for compensation for renal failure (procedure),n,via Query Table +180268000,Hemodialysis NEC (procedure),n,via Query Table +834961000000103,Hard water syndrome,n,via Query Table +426361000000104,[V]Unspecified aftercare involving intermittent dialysis (situation),n,via Query Table +426351000000102,[V]Other specified aftercare involving intermittent dialysis (situation),n,via Query Table +410511000000103,[V]Aftercare involving extracorporeal dialysis (situation),n,via Query Table +855481000000100,Aluminium intoxication,n,via Query Table +857241000000102,Xenograft renal transplant,n,via Query Table +856161000000105,Anaphylactoid reaction due to haemodialysis,n,via Query Table +291421000000102,Extracorporeal albumin haemodialysis,n,via Query Table +856681000000105,Chronic rejection of renal transplant,n,via Query Table +856701000000107,Chronic rejection of renal transplant - grade II,n,via Query Table +866751000000104,Infection of dialysis arteriovenous graft ,n,via Query Table +698810000,Hypertensive renal disease with end stage renal failure (disorder),n,via Query Table +371181000000109,Ligation of arteriovenous dialysis fistula ,n,via Query Table +236537009,Disorder associated with dialysis (disorder),n,via Query Table +856231000000108,Aneurysm of anastomotic site of dialysis arteriovenous fistula,n,via Query Table +847821000000106,Rupture of vein of transplanted kidney ,n,via Query Table +622441000000108,Transplantation of kidney NOS (procedure),n,via Query Table +938461000000107,Dialysis disequilibrium,n,via Query Table +866771000000108,Infection of dialysis arteriovenous fistula ,n,via Query Table +261991000000109,"Allotransplantation of kidney from cadaver, heart non-beating ",n,via Query Table +429211000000100,[X] Peritoneal dialysis associated peritonitis (disorder),n,via Query Table +261981000000107,"Allotransplantation of kidney from cadaver, heart-beating ",n,via Query Table +284451000000108,Extracorporeal albumin haemodialysis (procedure),n,via Query Table +856711000000109,Chronic rejection of renal transplant - grade III,n,via Query Table +855231000000100,Aneurysm of vein of transplanted kidney,n,via Query Table +637641000000106,Compensation for renal failure NOS (procedure),n,via Query Table +865791000000104,Infection of dialysis vascular access ,n,via Query Table +438503005,Surgically constructed arteriovenous fistula (morphologic abnormality),n,via Query Table +48994000,Renal homotransplantation with unilateral recipient nephrectomy (situation),n,via Query Table +309819001,[X] Peritoneal dialysis associated peritonitis (disorder),n,via Query Table +938451000000109,Disorder associated with dialysis,n,via Query Table +640131000000105,Placement of ambulatory apparatus for compensation for renal failure NOS (procedure),n,via Query Table +830931000000104,Acute rejection of renal transplant,n,via Query Table +266931000000104,Peritoneal dialysis NEC ,n,via Query Table +830881000000107,Acute rejection of renal transplant - grade I,n,via Query Table +872471000000109,Stenosis of arterial side of dialysis arteriovenous shunt ,n,via Query Table +857311000000108,Renal transplant rejection,n,via Query Table +865811000000103,Haemorrhage of dialysis vascular access ,n,via Query Table +236553007,Disorders associated with peritoneal dialysis (disorder),n,via Query Table +847801000000102,Rupture of artery of transplanted kidney ,n,via Query Table +866071000000105,Occlusion of dialysis arteriovenous fistula ,n,via Query Table +266911000000107,Automated peritoneal dialysis ,n,via Query Table +855521000000100,Aluminium-related osteomalacia,n,via Query Table +867001000000104,Haemorrhage of dialysis arteriovenous graft ,n,via Query Table +364701000000105,Malposition of peritoneal dialysis catheter (disorder),n,via Query Table +866091000000109,Occlusion of dialysis arteriovenous shunt ,n,via Query Table +867041000000101,Haemorrhage of dialysis arteriovenous shunt ,n,via Query Table +371191000000106,Ligation of arteriovenous dialysis graft ,n,via Query Table +857631000000109,Adynamic bone disease,n,via Query Table +267261000000102,Extracorporeal membrane oxygenation ,n,via Query Table +525981000000106,Continuous ambulatory peritoneal dialysis associated peritonitis (disorder),n,via Query Table +855861000000106,First use syndrome of dialysis,n,via Query Table +342221000000108,Ligation of arteriovenous dialysis graft (procedure),n,via Query Table +830891000000109,Acute rejection of renal transplant - grade II,n,via Query Table +223178003,[X]Failure of sterile precautions during kidney dialysis or other perfusion (disorder),n,via Query Table +398471000000102,[V]Aftercare involving intermittent dialysis (situation),n,via Query Table +637661000000107,Other specified placement of ambulatory apparatus for compensation for renal failure (procedure),n,via Query Table +857571000000105,Disorders associated with peritoneal dialysis,n,via Query Table +867021000000108,Haemorrhage of dialysis arteriovenous fistula ,n,via Query Table +523491000000101,Inadequate dialysis blood flow (finding),n,via Query Table +706901000000104,Continuous ambulatory peritoneal dialysis associated peritonitis,n,via Query Table +310435001,Perfusion and dialysis finding (finding),n,via Query Table +865991000000101,Thrombosis of dialysis arteriovenous fistula ,n,via Query Table +865771000000103,Occlusion of dialysis vascular access ,n,via Query Table diff --git a/codelists/opensafely-chronic-liver-disease-snomed.csv b/codelists/opensafely-chronic-liver-disease-snomed.csv new file mode 100644 index 0000000..855f899 --- /dev/null +++ b/codelists/opensafely-chronic-liver-disease-snomed.csv @@ -0,0 +1,285 @@ +id,name,active,notes +197286002,Recurrent hepatitis (disorder),y,direct mapping +235869004,Chronic viral hepatitis B with hepatitis D (disorder),y,direct mapping +235899008,Hepatic sclerosis (disorder),y,direct mapping +213231008,Hepatorenal syndrome as a complication of care (disorder),y,direct mapping +17709002,Bleeding esophageal varices (disorder),y,direct mapping +15999000,Mixed micro AND macronodular cirrhosis (disorder),y,direct mapping +266470007,Cardiac portal cirrhosis (disorder),y,direct mapping +186628001,Viral hepatitis C with coma (disorder),y,direct mapping +12368000,Secondary biliary cirrhosis (disorder),y,direct mapping +186639003,Chronic viral hepatitis B without delta-agent (disorder),y,direct mapping +235212007,Balloon tamponade of esophagus using Sengstaken-Blakemore tube (procedure),y,direct mapping +204782009,Atresia of hepatic ducts (disorder),y,direct mapping +235898000,Pericellular fibrosis of congenital syphilis (disorder),y,direct mapping +197303009,Bacterial portal cirrhosis (disorder),y,direct mapping +173660005,Rigid esophagoscopy and injection sclerotherapy of varices (procedure),y,direct mapping +408335007,Autoimmune hepatitis (disorder),y,direct mapping +235897005,Hypoxia-associated cirrhosis (disorder),y,direct mapping +174425003,Orthotopic liver transplant (procedure),y,direct mapping +197360009,Toxic liver disease with chronic lobular hepatitis (disorder),y,direct mapping +6183001,Indian childhood cirrhosis (disorder),y,direct mapping +18027006,Transplantation of liver (procedure),y,direct mapping +197368002,Hepatic granulomas in sarcoidosis (disorder),y,direct mapping +197324004,Liver abscess and sequelae of chronic liver disease (disorder),y,direct mapping +89580002,Cryptogenic cirrhosis (disorder),y,direct mapping +41309000,Alcoholic liver damage (disorder),y,direct mapping +204781002,Congenital absence of hepatic ducts (disorder),y,direct mapping +19943007,Cirrhosis of liver (disorder),y,direct mapping +10295004,Chronic viral hepatitis (disorder),y,direct mapping +174426002,Heterotopic liver transplant (procedure),y,direct mapping +235896001,Infectious cirrhosis (disorder),y,direct mapping +197300007,Pipestem portal cirrhosis (disorder),y,direct mapping +235911006,Liver transplant rejection (disorder),y,direct mapping +197361008,Toxic liver disease with chronic active hepatitis (disorder),y,direct mapping +419728003,Portal cirrhosis (disorder),y,direct mapping +235886005,Chronic hepatic failure (disorder),y,direct mapping +173639004,Fiberoptic esophagoscopy and injection sclerotherapy of varices (procedure),y,direct mapping +307757001,Chronic alcoholic hepatitis (disorder),y,direct mapping +67364009,Ligation of esophageal varices (procedure),y,direct mapping +197301006,Toxic portal cirrhosis (disorder),y,direct mapping +57339008,Chronic lobular hepatitis (disorder),y,direct mapping +197275004,Subacute hepatic failure (disorder),y,direct mapping +235880004,Alcoholic fibrosis and sclerosis of liver (disorder),y,direct mapping +195476002,"Esophageal varices without bleeding, associated with another disorder (disorder)",y,direct mapping +235895002,"Laennec's cirrhosis, non-alcoholic (disorder)",y,direct mapping +235902006,Intrahepatic phlebosclerosis and fibrosis (disorder),y,direct mapping +235912004,Liver transplant failure (disorder),y,direct mapping +14223005,Esophageal varices without bleeding (disorder),y,direct mapping +197284004,Chronic active hepatitis (disorder),y,direct mapping +31712002,Primary biliary cholangitis (disorder),y,direct mapping +197270009,Acute hepatic failure (disorder),y,direct mapping +197299004,Pigmentary portal cirrhosis (disorder),y,direct mapping +235889003,Drug-induced chronic hepatitis (disorder),y,direct mapping +91109007,Gastric varices (disorder),y,direct mapping +43904005,Macronodular cirrhosis (disorder),y,direct mapping +362421000000102,Chronic hepatitis annual review - enhanced services administration (procedure),y,direct mapping +34742003,Portal hypertension (disorder),y,direct mapping +51292008,Hepatorenal syndrome (disorder),y,direct mapping +235916001,Ichthyosis congenita with biliary atresia (disorder),y,direct mapping +195474004,Esophageal varices associated with another disorder (disorder),y,direct mapping +1287007,Congenital absence of bile duct (disorder),y,direct mapping +128302006,Chronic hepatitis C (disorder),y,direct mapping +20415001,Progressive sclerosing poliodystrophy (disorder),y,direct mapping +197310003,Biliary cirrhosis of children (disorder),y,direct mapping +235870003,Chronic non-A non-B hepatitis (disorder),y,direct mapping +21861000,Micronodular cirrhosis (disorder),y,direct mapping +31742004,Arteriohepatic dysplasia (disorder),y,direct mapping +174427006,Replacement of previous liver transplant (procedure),y,direct mapping +271440004,Cirrhosis secondary to cholestasis (disorder),y,direct mapping +235875008,Alcoholic hepatitis (disorder),y,direct mapping +235458006,Exploration of liver transplant (procedure),y,direct mapping +413438002,Acute hepatic failure due to drugs (disorder),y,direct mapping +308129003,Esophageal varices in cirrhosis of the liver (disorder),y,direct mapping +173617001,Open operations on esophageal varices (procedure),y,direct mapping +213230009,Hepatic failure as a complication of care (disorder),y,direct mapping +426841006,Fiberoptic endoscopic rubber band ligation of upper gastrointestinal tract varices (procedure),y,direct mapping +34736002,Chronic passive congestion of liver (disorder),y,direct mapping +328383001,Chronic liver disease (disorder),y,direct mapping +309783001,Esophageal varices in alcoholic cirrhosis of the liver (disorder),y,direct mapping +427022004,Liver disease due to cystic fibrosis (disorder),y,direct mapping +28670008,Esophageal varices (disorder),y,direct mapping +197359004,Toxic liver disease with chronic persistent hepatitis (disorder),y,direct mapping +197305002,Syphilitic portal cirrhosis (disorder),y,direct mapping +197316009,Portal fibrosis without cirrhosis (disorder),y,direct mapping +428198008,Transplantation of hepatocytes (procedure),y,direct mapping +235910007,Liver transplant disorder (disorder),y,direct mapping +197362001,Toxic liver disease with fibrosis and cirrhosis of liver (disorder),y,direct mapping +253807009,Intrahepatic biliary atresia (disorder),y,direct mapping +213153001,Liver transplant failure and rejection (disorder),y,direct mapping +195475003,"Esophageal varices with bleeding, associated with another disorder (disorder)",y,direct mapping +235884008,Fulminant hepatic failure (disorder),y,direct mapping +426356008,Orthotopic transplantation of whole liver (procedure),y,direct mapping +74669004,Cardiac cirrhosis (disorder),y,direct mapping +266469006,Multilobular portal cirrhosis (disorder),y,direct mapping +76301009,Florid cirrhosis (disorder),y,direct mapping +123604002,Toxic cirrhosis (disorder),y,direct mapping +173679008,Balloon tamponade of esophagus (procedure),y,direct mapping +265437009,Exploration of liver (procedure),y,direct mapping +76783007,Chronic hepatitis (disorder),y,direct mapping +197291001,Unilobular portal cirrhosis (disorder),y,direct mapping +79720007,Chronic nonalcoholic liver disease (disorder),y,direct mapping +68094008,Congenital hypoplasia of bile duct (disorder),y,direct mapping +235213002,Balloon tamponade of esophagus using Minnesota tube (procedure),y,direct mapping +197293003,Diffuse nodular cirrhosis (disorder),y,direct mapping +40946000,Hepatic coma due to viral hepatitis (disorder),y,direct mapping +41889008,Chronic persistent hepatitis (disorder),y,direct mapping +61977001,Chronic type B viral hepatitis (disorder),y,direct mapping +776981000000103,Cirrhosis associated with cystic fibrosis (disorder),y,direct mapping +81675001,Chronic yellow atrophy of liver (disorder),y,direct mapping +235881000,Alcoholic hepatic failure (disorder),y,direct mapping +1761006,Biliary cirrhosis (disorder),y,direct mapping +62484002,Hepatic fibrosis (disorder),y,direct mapping +235900003,Portal and splenic vein sclerosis (disorder),y,direct mapping +82821008,Congenital atresia of extrahepatic bile duct (disorder),y,direct mapping +773411000000107,Liver failure support management (procedure),y,direct mapping +197296006,Capsular portal cirrhosis (disorder),y,direct mapping +266471006,Juvenile portal cirrhosis (disorder),y,direct mapping +9953008,Acute alcoholic liver disease (disorder),y,direct mapping +50325005,Alcoholic fatty liver (disorder),y,direct mapping +197279005,Cirrhosis and chronic liver disease (disorder),y,direct mapping +77480004,Congenital biliary atresia (disorder),y,direct mapping +59927004,Hepatic failure (disorder),y,direct mapping +235901004,Hepatic fibrosis with hepatic sclerosis (disorder),y,direct mapping +737297006,Transplanted liver present (finding),y,direct mapping +266468003,Cirrhosis - non-alcoholic (disorder),y,direct mapping +235885009,Subfulminant hepatic failure (disorder),y,direct mapping +173661009,Rigid esophagoscopy and banding of esophageal varices (procedure),y,direct mapping +79607001,Congenital hepatic fibrosis (disorder),y,direct mapping +197441003,Primary sclerosing cholangitis (disorder),y,direct mapping +173621008,Open injection sclerotherapy to esophageal varices (procedure),y,direct mapping +173641003,Fiberoptic esophagoscopy and banding of esophageal varices (procedure),y,direct mapping +197294009,Fatty portal cirrhosis (disorder),y,direct mapping +420054005,Alcoholic cirrhosis (disorder),y,direct mapping +721711009,Autoimmune hepatitis type 1 (disorder),y,descendant of concept mapped from leaf +314587006,Trial dissection of liver mass (procedure),y,descendant of concept mapped from leaf +721710005,Fibrosis of liver caused by alcohol (disorder),y,descendant of concept mapped from leaf +24807004,Bleeding gastric varices (disorder),y,descendant of concept mapped from leaf +424340000,Hepatic coma due to chronic hepatitis B (disorder),y,descendant of concept mapped from leaf +1092801000119102,Hepatic ascites co-occurrent with chronic active hepatitis due to toxic liver disease (disorder),y,descendant of concept mapped from leaf +768288001,Chronic hepatitis C caused by Hepatitis C virus genotype 1b (disorder),y,descendant of concept mapped from leaf +721206006,Solitary varix of esophagus (disorder),y,descendant of concept mapped from leaf +146371000119104,Hepatic coma due to chronic hepatitis C (disorder),y,descendant of concept mapped from leaf +78208005,Pigment cirrhosis (disorder),y,descendant of concept mapped from leaf +424099008,Hepatic coma due to acute hepatitis B (disorder),y,descendant of concept mapped from leaf +425413006,Drug-induced cirrhosis of liver (disorder),y,descendant of concept mapped from leaf +737202006,Fibropolycystic disease of liver (disorder),y,descendant of concept mapped from leaf +61477008,Incision and exploration of liver (procedure),y,descendant of concept mapped from leaf +26206000,Hepatic coma due to viral hepatitis B (disorder),y,descendant of concept mapped from leaf +536002,Glissonian cirrhosis (disorder),y,descendant of concept mapped from leaf +125921000119106,Hepatic coma due to acute hepatitis C (disorder),y,descendant of concept mapped from leaf +716203000,Decompensated cirrhosis of liver (disorder),y,descendant of concept mapped from leaf +721847002,Joubert syndrome with congenital hepatic fibrosis (disorder),y,descendant of concept mapped from leaf +722864002,Acute hepatic failure caused by hepatitis virus (disorder),y,descendant of concept mapped from leaf +89789003,Chronic aggressive viral hepatitis (disorder),y,descendant of concept mapped from leaf +720461006,Acute infantile liver failure due to synthesis defect of mitochondrial deoxyribonucleic acid encoded protein (disorder),y,descendant of concept mapped from leaf +240792005,Symmer's pipe-stem fibrosis (disorder),y,descendant of concept mapped from leaf +22508003,Hepatic failure due to a procedure (disorder),y,descendant of concept mapped from leaf +725938001,Cirrhosis of liver caused by methotrexate (disorder),y,descendant of concept mapped from leaf +33167004,Complication of transplanted liver (disorder),y,descendant of concept mapped from leaf +60037002,Chronic persistent viral hepatitis (disorder),y,descendant of concept mapped from leaf +432777003,Accelerated rejection of liver transplant (disorder),y,descendant of concept mapped from leaf +725939009,Cirrhosis of liver caused by amiodarone (disorder),y,descendant of concept mapped from leaf +768006009,Chronic hepatitis C caused by Hepatitis C virus genotype 3 (disorder),y,descendant of concept mapped from leaf +725940006,Cirrhosis of liver caused by methyldopa (disorder),y,descendant of concept mapped from leaf +853761000000103,Living donor liver transplantation (procedure),y,descendant of concept mapped from leaf +708248004,End stage liver disease (disorder),y,descendant of concept mapped from leaf +62216007,Familial arthrogryposis-cholestatic hepatorenal syndrome (disorder),y,descendant of concept mapped from leaf +735733008,Cirrhosis of liver co-occurrent and due to primary sclerosing cholangitis (disorder),y,descendant of concept mapped from leaf +19682006,Lupus hepatitis (disorder),y,descendant of concept mapped from leaf +1116000,Chronic aggressive type B viral hepatitis (disorder),y,descendant of concept mapped from leaf +27280000,Liver transplant with recipient hepatectomy (procedure),y,descendant of concept mapped from leaf +703866000,Chronic hepatitis C with stage 2 fibrosis (disorder),y,descendant of concept mapped from leaf +722865001,Subacute hepatic failure caused by hepatitis virus (disorder),y,descendant of concept mapped from leaf +45256007,Cruveilhier-Baumgarten syndrome (disorder),y,descendant of concept mapped from leaf +22846003,Hepatorenal syndrome following delivery (disorder),y,descendant of concept mapped from leaf +715401008,Primary biliary cirrhosis co-occurrent with systemic scleroderma (disorder),y,descendant of concept mapped from leaf +713542007,Portal hypertension caused by antiretroviral drug (disorder),y,descendant of concept mapped from leaf +123606000,Cholangiolitic cirrhosis (disorder),y,descendant of concept mapped from leaf +371139006,Early cirrhosis (disorder),y,descendant of concept mapped from leaf +717156002,Biliary atresia with splenic malformation syndrome (disorder),y,descendant of concept mapped from leaf +717865007,Gastric varices without bleeding (disorder),y,descendant of concept mapped from leaf +276723008,Intrahepatic biliary hypoplasia (disorder),y,descendant of concept mapped from leaf +768289009,Chronic hepatitis C caused by Hepatitis C virus genotype 1a (disorder),y,descendant of concept mapped from leaf +33144001,Parasitic cirrhosis (disorder),y,descendant of concept mapped from leaf +347891000119103,Chronic hepatitis C with stage 3 fibrosis (disorder),y,descendant of concept mapped from leaf +50167007,Chronic active type B viral hepatitis (disorder),y,descendant of concept mapped from leaf +707420003,Portal hypertension due to cystic fibrosis (disorder),y,descendant of concept mapped from leaf +314963000,Local recurrence of malignant tumor of liver (disorder),y,descendant of concept mapped from leaf +432772009,Hyperacute rejection of liver transplant (disorder),y,descendant of concept mapped from leaf +721160006,Downhill varices of esophagus (disorder),y,descendant of concept mapped from leaf +66870002,Chronic active viral hepatitis (disorder),y,descendant of concept mapped from leaf +768127002,Chronic hepatitis C caused by Hepatitis C virus genotype 1 (disorder),y,descendant of concept mapped from leaf +721712002,Autoimmune hepatitis type 2 (disorder),y,descendant of concept mapped from leaf +721713007,Autoimmune hepatitis type 3 (disorder),y,descendant of concept mapped from leaf +37688005,Clonorchiasis with biliary cirrhosis (disorder),y,descendant of concept mapped from leaf +153091000119109,Hepatic coma due to chronic hepatitis B with delta agent (disorder),y,descendant of concept mapped from leaf +103611000119102,Cirrhosis of liver due to hepatitis B (disorder),y,descendant of concept mapped from leaf +186624004,Acute hepatitis B with delta agent (coinfection) with hepatic coma (disorder),y,descendant of concept mapped from leaf +86454000,Postnecrotic cirrhosis (disorder),y,descendant of concept mapped from leaf +307008007,Exploration of liver hilum (procedure),y,descendant of concept mapped from leaf +767809001,Chronic hepatitis C caused by hepatitis C virus genotype 6 (disorder),y,descendant of concept mapped from leaf +123717006,Advanced cirrhosis (disorder),y,descendant of concept mapped from leaf +717187000,Nephronophthisis hepatic fibrosis syndrome (disorder),y,descendant of concept mapped from leaf +713966008,Occult chronic type B viral hepatitis (disorder),y,descendant of concept mapped from leaf +713965007,Sclerosis of portal vein and splenic vein caused by antiretroviral drug (disorder),y,descendant of concept mapped from leaf +31005002,Hepatorenal syndrome due to a procedure (disorder),y,descendant of concept mapped from leaf +16060001,Hepatic coma due to viral hepatitis A (disorder),y,descendant of concept mapped from leaf +713181003,Chronic alcoholic liver disease (disorder),y,descendant of concept mapped from leaf +16070004,Syphilitic cirrhosis (disorder),y,descendant of concept mapped from leaf +28009009,Liver transplant without recipient hepatectomy (procedure),y,descendant of concept mapped from leaf +722867009,Idiopathic portal hypertension (disorder),y,descendant of concept mapped from leaf +450880008,Chronic hepatitis E (disorder),y,descendant of concept mapped from leaf +699189004,North American Indian childhood cirrhosis (disorder),y,descendant of concept mapped from leaf +109819003,Obstructive biliary cirrhosis (disorder),y,descendant of concept mapped from leaf +27156006,Posthepatitic cirrhosis (disorder),y,descendant of concept mapped from leaf +715864007,Non-Wilsonian hepatic copper toxicosis of infancy and childhood (disorder),y,descendant of concept mapped from leaf +31155007,Benign recurrent intrahepatic cholestasis (disorder),y,descendant of concept mapped from leaf +708198006,Chronic active hepatitis C (disorder),y,descendant of concept mapped from leaf +713370005,Acute on chronic alcoholic liver disease (disorder),y,descendant of concept mapped from leaf +123605001,Nutritional cirrhosis (disorder),y,descendant of concept mapped from leaf +768125005,Chronic hepatitis C caused by Hepatitis C virus genotype 2 (disorder),y,descendant of concept mapped from leaf +725416005,Cardiomyopathy co-occurrent and due to cirrhosis of liver (disorder),y,descendant of concept mapped from leaf +767810006,Chronic hepatitis C caused by hepatitis C virus genotype 5 (disorder),y,descendant of concept mapped from leaf +73475009,Hepatogenous chronic copper poisoning (disorder),y,descendant of concept mapped from leaf +768126006,Chronic hepatitis C caused by Hepatitis C virus genotype 4 (disorder),y,descendant of concept mapped from leaf +431222008,Acute rejection of liver transplant (disorder),y,descendant of concept mapped from leaf +123607009,Septal fibrosis of liver (disorder),y,descendant of concept mapped from leaf +9843006,Chronic lymphocytic cholangitis-cholangiohepatitis (disorder),y,descendant of concept mapped from leaf +38662009,Chronic persistent type B viral hepatitis (disorder),y,descendant of concept mapped from leaf +44047000,Zieve's syndrome (disorder),y,descendant of concept mapped from leaf +831000119103,Cirrhosis of liver due to chronic hepatitis C (disorder),y,descendant of concept mapped from leaf +432908002,Chronic rejection of liver transplant (disorder),y,descendant of concept mapped from leaf +123716002,Latent cirrhosis (disorder),y,descendant of concept mapped from leaf +735451005,Chronic infection caused by Hepatitis D virus (disorder),y,descendant of concept mapped from leaf +812271000000102,Viral hepatitis with hepatic coma (disorder),n,via Query Table +227071000000107,Fibreoptic endoscopic rubber band ligation of upper gastrointestinal tract varices (procedure),n,via Query Table +256971000000107,Fibreoptic endoscopic rubber band ligation of upper gastrointestinal tract varices ,n,via Query Table +702777009,Liver transplant recipient (finding),n,via Query Table +362441000000109,Chronic hepatitis annual review - enhanced services administration ,n,via Query Table +885861000000104,Liver transplant recipient (finding),n,via Query Table +595961000000105,Transplantation of liver NOS (procedure),n,via Query Table +696141000000105,Other specified open operation on esophageal varices (procedure),n,via Query Table +187435007,"[X]Chronic viral hepatitis, unspecified (disorder)",n,via Query Table +257811000000106,Transplantation of liver cells ,n,via Query Table +832381000000103,Viral hepatitis with hepatic coma,n,via Query Table +589511000000102,Alcoholic liver damage unspecified (disorder),n,via Query Table +362431000000100,Chronic hepatitis annual review - enhanced services administration ,n,via Query Table +662341000000105,Cirrhosis of liver NOS (disorder),n,via Query Table +592421000000102,Other non-alcoholic chronic liver disease NOS (disorder),n,via Query Table +187436008,[X]Unspecified viral hepatitis with coma (disorder),n,via Query Table +662331000000101,Hepatic failure NOS (disorder),n,via Query Table +592411000000108,Other non-alcoholic chronic liver disease (disorder),n,via Query Table +596791000000105,Biliary atresia NOS (disorder),n,via Query Table +197553002,[X]Other and unspecified cirrhosis of liver (disorder),n,via Query Table +233331000000102,Orthotopic transplantation of liver NEC (procedure),n,via Query Table +713652000,Decompensated liver disease (disorder),n,via Query Table +875211000000105,Chronic viral hepatitis B,n,via Query Table +470971000000107,[X]Other and unspecified cirrhosis of liver (disorder),n,via Query Table +589521000000108,Chronic hepatitis unspecified (disorder),n,via Query Table +707011000000103,Liver disease due to cystic fibrosis,n,via Query Table +652571000000102,Esophageal varices in diseases EC NOS (disorder),n,via Query Table +444071000000104,[X]Unspecified viral hepatitis with coma (disorder),n,via Query Table +671731000000104,Non-alcoholic cirrhosis NOS (disorder),n,via Query Table +226951000000102,Orthotopic transplantation of whole liver (procedure),n,via Query Table +197285003,Chronic aggressive hepatitis (disorder),n,via Query Table +589561000000100,Biliary cirrhosis NOS (disorder),n,via Query Table +464381000000109,[V]Liver transplanted (context-dependent category),n,via Query Table +589541000000101,Infectious cirrhosis NOS (disorder),n,via Query Table +538521000000107,Other specified transplantation of liver (procedure),n,via Query Table +663501000000108,Open operation on esophageal varices NOS (procedure),n,via Query Table +257821000000100,Orthotopic transplantation of whole liver ,n,via Query Table +778131000000103,Cystic fibrosis related cirrhosis,n,via Query Table +235894003,Portal cirrhosis (disorder),n,via Query Table +419541000000109,"[X]Chronic viral hepatitis, unspecified (disorder)",n,via Query Table +417371000000102,[X]Esophageal varices in diseases classified elsewhere (disorder),n,via Query Table +589551000000103,Portal cirrhosis unspecified (disorder),n,via Query Table +111370006,Cirrhosis of liver not due to alcohol (disorder),n,via Query Table +316061004,[V]Liver transplanted (situation),n,via Query Table +176411000000108,Acute hepatic failure due to drugs,n,via Query Table +186621007,Viral hepatitis A with coma (disorder),n,via Query Table +186623005,Viral hepatitis B with coma (disorder),n,via Query Table +432261000000109,"[X]Chronic viral hepatitis, unspecified",n,via Query Table +226941000000100,Transplantation of liver cells (procedure),n,via Query Table +526101000000108,Liver disease due to cystic fibrosis (disorder),n,via Query Table +622551000000105,Liver abscess and chronic liver disease causing sequelae NOS (disorder),n,via Query Table diff --git a/codelists/opensafely-chronic-respiratory-disease-snomed.csv b/codelists/opensafely-chronic-respiratory-disease-snomed.csv new file mode 100644 index 0000000..2a08f04 --- /dev/null +++ b/codelists/opensafely-chronic-respiratory-disease-snomed.csv @@ -0,0 +1,924 @@ +id,name,active,notes +233754007,Cerium pneumoconiosis (disorder),y,direct mapping +196133001,Lung disease with systemic sclerosis (disorder),y,direct mapping +776981000000103,Cirrhosis associated with cystic fibrosis (disorder),y,direct mapping +711379004,Interstitial lung disease due to connective tissue disease (disorder),y,direct mapping +213223003,Mendelson's syndrome as a complication of care (disorder),y,direct mapping +196135008,Pulmonary amyloidosis (disorder),y,direct mapping +22607003,Asbestosis (disorder),y,direct mapping +233675009,Toxic emphysema (disorder),y,direct mapping +716241000000106,Chronic obstructive pulmonary disease monitoring first letter (procedure),y,direct mapping +68328006,Centriacinar emphysema (disorder),y,direct mapping +23315001,Sequoiosis (disorder),y,direct mapping +425748003,Acute exacerbation of chronic bronchitis (disorder),y,direct mapping +195953005,Mixed simple and mucopurulent chronic bronchitis (disorder),y,direct mapping +233769008,Stage 3 pulmonary sarcoidosis (disorder),y,direct mapping +63480004,Chronic bronchitis (disorder),y,direct mapping +36696005,Kaolinosis (disorder),y,direct mapping +196190001,Chronic pulmonary insufficiency following surgery (disorder),y,direct mapping +88039007,Transplant of lung (procedure),y,direct mapping +67569000,Bronchopulmonary dysplasia of newborn (disorder),y,direct mapping +196049002,Chronic pulmonary radiation disease (disorder),y,direct mapping +293991000000106,Very severe chronic obstructive pulmonary disease (disorder),y,direct mapping +86092005,Cystic fibrosis with meconium ileus (disorder),y,direct mapping +783631000000109,General practitioner out of hours service notified of chronic obstructive pulmonary disease care plan (finding),y,direct mapping +196021009,Acute pneumonitis caused by chemical fumes (disorder),y,direct mapping +85407005,Pigeon-fanciers' disease (disorder),y,direct mapping +198901000000105,Multiple chronic obstructive pulmonary disease emergency hospital admissions (finding),y,direct mapping +187233002,Sarcoidosis of lung with sarcoidosis of lymph nodes (disorder),y,direct mapping +90117007,Tuberculous fibrosis of lung (disorder),y,direct mapping +13394002,Suberosis (disorder),y,direct mapping +195989002,Pituitary snuff-takers' disease (disorder),y,direct mapping +7063008,Gangrenous pneumonia (disorder),y,direct mapping +47386001,Mendelson's syndrome resulting from a procedure (disorder),y,direct mapping +87433001,Pulmonary emphysema (disorder),y,direct mapping +195951007,Acute exacerbation of chronic obstructive airways disease (disorder),y,direct mapping +233724002,Toxic diffuse interstitial pulmonary fibrosis (disorder),y,direct mapping +233725001,Drug-induced diffuse interstitial pulmonary fibrosis (disorder),y,direct mapping +105977003,Non-infectious pneumonia (disorder),y,direct mapping +866901000000103,Eosinophilic bronchitis (disorder),y,direct mapping +195957006,Chronic bullous emphysema (disorder),y,direct mapping +68333005,Furriers' lung (disorder),y,direct mapping +86555001,Cystic fibrosis of the lung (disorder),y,direct mapping +427123006,Interstitial lung disease due to collagen vascular disease (disorder),y,direct mapping +233661002,Inherited mucociliary clearance defect (disorder),y,direct mapping +313296004,Mild chronic obstructive pulmonary disease (disorder),y,direct mapping +25897000,Malt-workers' lung (disorder),y,direct mapping +62371005,Pulmonary siderosis (disorder),y,direct mapping +115666004,Animal handlers' lung (disorder),y,direct mapping +51577008,Wilson-Mikity syndrome (disorder),y,direct mapping +367542003,Pulmonary eosinophilia (disorder),y,direct mapping +195984007,Recurrent bronchiectasis (disorder),y,direct mapping +51615001,Fibrosis of lung (disorder),y,direct mapping +233700005,Rodent handlers' lung (disorder),y,direct mapping +44274007,Lymphoid interstitial pneumonia (disorder),y,direct mapping +820341000000109,Chronic obstructive pulmonary disease rescue pack not indicated (situation),y,direct mapping +233759002,Mixed mineral dust pneumoconiosis (disorder),y,direct mapping +29422001,Coal workers' pneumoconiosis (disorder),y,direct mapping +90610005,Interstitial pulmonary fibrosis of prematurity (disorder),y,direct mapping +233733000,Toxic pneumonitis (disorder),y,direct mapping +426705001,Diabetes mellitus co-occurrent and due to cystic fibrosis (disorder),y,direct mapping +233673002,Drug-induced bronchiolitis obliterans (disorder),y,direct mapping +195959009,Zonal bullous emphysema (disorder),y,direct mapping +473202005,Optimization of medication for chronic obstructive lung disease (procedure),y,direct mapping +790301000000101,Referral to chronic obstructive pulmonary disease community nursing team (procedure),y,direct mapping +10692761000119107,Asthma-chronic obstructive pulmonary disease overlap syndrome (disorder),y,direct mapping +196138005,Lung disease with systemic lupus erythematosus (disorder),y,direct mapping +196001008,Chronic obstructive pulmonary disease with acute lower respiratory infection (disorder),y,direct mapping +266368002,Post-inflammatory pulmonary fibrosis (disorder),y,direct mapping +13645005,Chronic obstructive lung disease (disorder),y,direct mapping +233758005,Mica pneumoconiosis (disorder),y,direct mapping +716281000000103,Chronic obstructive pulmonary disease monitoring verbal invitation (procedure),y,direct mapping +195963002,Acute vesicular emphysema (disorder),y,direct mapping +233633008,Bronchiectasis caused by toxic inhalation (disorder),y,direct mapping +233694004,Dog house disease (disorder),y,direct mapping +26427008,Chronic pulmonary histoplasmosis (disorder),y,direct mapping +1066841000000108,Chronic obstructive pulmonary disease monitoring short message service text message second invitation (procedure),y,direct mapping +233749003,Complicated pneumoconiosis (disorder),y,direct mapping +4981000,Panacinar emphysema (disorder),y,direct mapping +232658009,Double lung transplant (procedure),y,direct mapping +111292008,Necrotizing sarcoid granulomatosis (disorder),y,direct mapping +233738009,Radiation-induced fibrous mediastinitis (disorder),y,direct mapping +235978006,Cystic fibrosis of pancreas (disorder),y,direct mapping +233692000,Cryptogenic pulmonary eosinophilia (disorder),y,direct mapping +196027008,Toxic bronchiolitis obliterans (disorder),y,direct mapping +236302005,Acute interstitial pneumonia (disorder),y,direct mapping +47515009,Simple silicosis (disorder),y,direct mapping +276537001,Chronic pulmonary insufficiency of prematurity (disorder),y,direct mapping +52333004,Mushroom workers' lung (disorder),y,direct mapping +361195001,Pulmonary fibroplasia (disorder),y,direct mapping +718241000000107,Issue of chronic obstructive pulmonary disease rescue pack (procedure),y,direct mapping +195985008,Post-infective bronchiectasis (disorder),y,direct mapping +69339004,Bird-fanciers' lung (disorder),y,direct mapping +789661000000102,Preferred place of care for next exacerbation of chronic obstructive pulmonary disease (finding),y,direct mapping +857811000000102,Chronic obstructive pulmonary disease written self management plan declined (situation),y,direct mapping +233763009,Silicotuberculosis (disorder),y,direct mapping +1259003,Schistosis (disorder),y,direct mapping +233774000,Humidifier fever (disorder),y,direct mapping +16003001,Giant bullous emphysema (disorder),y,direct mapping +37471005,Extrinsic allergic alveolitis (disorder),y,direct mapping +266356006,Atrophic (senile) emphysema (disorder),y,direct mapping +233761006,Subacute silicosis (disorder),y,direct mapping +24369008,Pulmonary sarcoidosis (disorder),y,direct mapping +427022004,Liver disease due to cystic fibrosis (disorder),y,direct mapping +526091000000100,Cystic fibrosis with distal intestinal obstruction syndrome (disorder),y,direct mapping +73144008,Pneumoconiosis caused by talc (disorder),y,direct mapping +233701009,Sewage workers' lung (disorder),y,direct mapping +18690003,Farmers' lung (disorder),y,direct mapping +40122008,Pneumoconiosis (disorder),y,direct mapping +196017002,Pneumoconiosis associated with tuberculosis (disorder),y,direct mapping +233756009,Thorium pneumoconiosis (disorder),y,direct mapping +266404004,Chronic chemical respiratory disease (disorder),y,direct mapping +414087000,Emergency chronic obstructive pulmonary disease admission since last appointment (regime/therapy),y,direct mapping +313297008,Moderate chronic obstructive pulmonary disease (disorder),y,direct mapping +40100001,Obliterative bronchiolitis (disorder),y,direct mapping +16838000,Mediastinal emphysema (disorder),y,direct mapping +398726004,Rheumatoid lung disease (disorder),y,direct mapping +371611000000107,Chronic obstructive pulmonary disease patient unsuitable for pulmonary rehabilitation - enhanced services administration (procedure),y,direct mapping +84409004,Fetid chronic bronchitis (disorder),y,direct mapping +713731000000102,Chronic obstructive pulmonary disease monitoring administration (record artifact),y,direct mapping +233628009,Acquired bronchiectasis (disorder),y,direct mapping +857661000000104,Seen in chronic obstructive pulmonary disease clinic (finding),y,direct mapping +390941006,Chronic obstructive pulmonary disease monitoring due (finding),y,direct mapping +196047000,Acute radiation pneumonitis (disorder),y,direct mapping +10713006,Diffuse interstitial rheumatoid disease of lung (disorder),y,direct mapping +267276009,Obstetric anesthesia with pulmonary complications (disorder),y,direct mapping +266366003,Lung disease due to external agents (disorder),y,direct mapping +232657004,Single lung transplant (procedure),y,direct mapping +811961000000106,Chronic obstructive pulmonary disease self-management plan agreed (finding),y,direct mapping +87909002,Hard metal pneumoconiosis (disorder),y,direct mapping +515631000000107,Cystic fibrosis annual review (regime/therapy),y,direct mapping +77690003,Interstitial emphysema of lung (disorder),y,direct mapping +1066281000000104,Chronic obstructive pulmonary disease monitoring short message service text message invitation (procedure),y,direct mapping +827571000000106,Has chronic obstructive pulmonary disease care plan (finding),y,direct mapping +383611000000102,At risk of chronic obstructive pulmonary disease exacerbation (finding),y,direct mapping +805261000000101,Bronchiolitis obliterans syndrome after lung transplantation (disorder),y,direct mapping +48188009,Azoospermia (finding),y,direct mapping +233771008,Endobronchial sarcoidosis (disorder),y,direct mapping +42680007,Endogenous lipoid pneumonia (disorder),y,direct mapping +10785007,Vinyard sprayers' lung (disorder),y,direct mapping +7343008,Liparitosis (disorder),y,direct mapping +277656005,Primary pulmonary hypoplasia (disorder),y,direct mapping +275503004,Tension pneumatocele (disorder),y,direct mapping +736283006,Chronic obstructive pulmonary disease clinical management plan (record artifact),y,direct mapping +375911000000102,Chronic obstructive pulmonary disease structured smoking assessment declined - enhanced services administration (procedure),y,direct mapping +233631005,Toxin-induced bronchiectasis (disorder),y,direct mapping +716358000,Telehealth chronic obstructive pulmonary disease monitoring (regime/therapy),y,direct mapping +18121009,Chronic berylliosis (disorder),y,direct mapping +428173007,Chronic hypoxemic respiratory failure (disorder),y,direct mapping +45145000,Unilateral emphysema (situation),y,direct mapping +17996008,Pneumoconiosis caused by inorganic dust (disorder),y,direct mapping +192658007,Giant cell interstitial pneumonitis (disorder),y,direct mapping +190909002,Cystic fibrosis with intestinal manifestations (disorder),y,direct mapping +90623003,Aluminosis of lung (disorder),y,direct mapping +404807005,Cheese-washers' lung (disorder),y,direct mapping +196046009,Acute pulmonary radiation disease (disorder),y,direct mapping +38729007,Wheat weevil disease (disorder),y,direct mapping +162974009,On examination - fibrosis of lung present (disorder),y,direct mapping +277486008,Pulmonary hypoplasia associated with short gestation (disorder),y,direct mapping +8247009,Berylliosis (disorder),y,direct mapping +196026004,Chronic emphysema caused by chemical fumes (disorder),y,direct mapping +857791000000103,Chronic obstructive pulmonary disease rescue pack declined (situation),y,direct mapping +704123000,Step down change in chronic obstructive pulmonary disease management plan (regime/therapy),y,direct mapping +526071000000104,Arthropathy in cystic fibrosis (disorder),y,direct mapping +196052005,Acute drug-induced interstitial lung disorder (disorder),y,direct mapping +401184000,Chronic obstructive pulmonary disease monitoring by nurse (regime/therapy),y,direct mapping +85761009,Byssinosis (disorder),y,direct mapping +390891009,Chronic obstructive pulmonary disease monitoring (regime/therapy),y,direct mapping +408501008,Emergency hospital admission for chronic obstructive pulmonary disease (procedure),y,direct mapping +805002,Pneumoconiosis caused by silica (disorder),y,direct mapping +190905008,Cystic fibrosis (disorder),y,direct mapping +233672007,Byssinosis grade 3 (disorder),y,direct mapping +233727009,Mediastinal radiation fibrosis (disorder),y,direct mapping +78723001,Cannabinosis (disorder),y,direct mapping +859041000000103,Exacerbation of cystic fibrosis (disorder),y,direct mapping +233674008,Pulmonary emphysema in alpha-1 primary immunodeficiency deficiency (disorder),y,direct mapping +73448002,Fish-meal workers' lung (disorder),y,direct mapping +196053000,Chronic drug-induced interstitial lung disorders (disorder),y,direct mapping +232660006,Bilateral sequential single lung transplant (procedure),y,direct mapping +233696002,Lycoperdonosis (disorder),y,direct mapping +233751004,Metal pneumoconiosis (disorder),y,direct mapping +86204009,Immotile cilia syndrome (disorder),y,direct mapping +61937009,Simple chronic bronchitis (disorder),y,direct mapping +233768000,Stage 2 pulmonary sarcoidosis (disorder),y,direct mapping +79958002,Grain fever (disorder),y,direct mapping +20322005,Chronic respiratory disease in perinatal period (disorder),y,direct mapping +716901000000101,Chronic obstructive pulmonary disease monitoring telephone invitation (procedure),y,direct mapping +7548000,Rheumatic pneumonia (disorder),y,direct mapping +760601000000107,Chronic obstructive pulmonary disease 3 monthly review (regime/therapy),y,direct mapping +23022004,Tuberculous bronchiectasis (disorder),y,direct mapping +939431000000108,History of bronchiectasis (situation),y,direct mapping +12295008,Bronchiectasis (disorder),y,direct mapping +394702007,Chronic obstructive pulmonary disease follow-up (regime/therapy),y,direct mapping +46847001,Chronic pulmonary edema (disorder),y,direct mapping +195958001,Segmental bullous emphysema (disorder),y,direct mapping +51277007,Stannosis (disorder),y,direct mapping +719218000,Cryptogenic organizing pneumonia (disorder),y,direct mapping +233764003,Wollastonite pneumoconiosis (disorder),y,direct mapping +233755008,Nickel pneumoconiosis (disorder),y,direct mapping +85438006,Diatomaceous earth disease (disorder),y,direct mapping +233659006,Asbestos-induced pleural plaque (disorder),y,direct mapping +195990006,Air-conditioner and humidifier lung (disorder),y,direct mapping +64631008,Fullers' earth disease (disorder),y,direct mapping +74417001,Mucopurulent chronic bronchitis (disorder),y,direct mapping +196137000,Lung disease with Sjögren's disease (disorder),y,direct mapping +233726000,Localized pulmonary fibrosis (disorder),y,direct mapping +198411000000102,Chronic obstructive pulmonary disease does not disturb sleep (finding),y,direct mapping +80825009,Congenital hypoplasia of lung (disorder),y,direct mapping +196019004,Bronchitis and pneumonitis caused by chemical fumes (disorder),y,direct mapping +233702002,Summer-type hypersensitivity pneumonitis (disorder),y,direct mapping +58691003,Antimony pneumoconiosis (disorder),y,direct mapping +285381006,Acute infective exacerbation of chronic obstructive airways disease (disorder),y,direct mapping +196136009,Lung disease co-occurrent with polymyositis (disorder),y,direct mapping +445090007,Fibrosing colonopathy (disorder),y,direct mapping +81423003,Cystic fibrosis without meconium ileus (disorder),y,direct mapping +42402006,Kartagener syndrome (disorder),y,direct mapping +44165003,Complication of transplanted lung (disorder),y,direct mapping +394703002,Chronic obstructive pulmonary disease annual review (regime/therapy),y,direct mapping +129451001,Respiratory bronchiolitis associated interstitial lung disease (disorder),y,direct mapping +233698001,Paprika splitters' lung (disorder),y,direct mapping +233757000,Zirconium pneumoconiosis (disorder),y,direct mapping +66987001,Congenital lobar emphysema (disorder),y,direct mapping +12088005,Budgerigar-fanciers' disease (disorder),y,direct mapping +700250006,Idiopathic pulmonary fibrosis (disorder),y,direct mapping +233667003,Rutland ciliary disorientation syndrome (disorder),y,direct mapping +741056003,Education about chronic obstructive pulmonary disease (procedure),y,direct mapping +13151001,Flax-dressers' disease (disorder),y,direct mapping +760621000000103,Chronic obstructive pulmonary disease 6 monthly review (regime/therapy),y,direct mapping +185086009,Chronic obstructive bronchitis (disorder),y,direct mapping +233713004,Seasonal cryptogenic organizing pneumonia with biochemical cholestasis (disorder),y,direct mapping +205237003,Pneumonitis (disorder),y,direct mapping +39871006,Chronic respiratory failure (disorder),y,direct mapping +360470001,Chronic mucus hypersecretion (disorder),y,direct mapping +8549006,Desquamative interstitial pneumonia (disorder),y,direct mapping +67242002,Bagassosis (disorder),y,direct mapping +33325001,Compensatory emphysema (disorder),y,direct mapping +233664005,Immotile cilia syndrome due to defective radial spokes (disorder),y,direct mapping +14700006,Bauxite fibrosis of lung (disorder),y,direct mapping +233730002,Lupus pneumonia (disorder),y,direct mapping +77593006,Congenital bronchiectasis (disorder),y,direct mapping +266355005,Bullous emphysema with collapse (disorder),y,direct mapping +50589003,Silver polishers' lung disease (disorder),y,direct mapping +196051003,Drug-induced interstitial lung disorder (disorder),y,direct mapping +233770009,Stage 4 pulmonary sarcoidosis (disorder),y,direct mapping +270473001,History of chronic obstructive airway disease (situation),y,direct mapping +426896000,Chronic hypercapnic respiratory failure (disorder),y,direct mapping +233750003,Erionite pneumoconiosis (disorder),y,direct mapping +375851000000108,Referred for chronic obstructive pulmonary disease structured smoking assessment - enhanced services administration (procedure),y,direct mapping +847091000000104,Acute non-infective exacerbation of chronic obstructive pulmonary disease (disorder),y,direct mapping +1066851000000106,Chronic obstructive pulmonary disease monitoring short message service text message third invitation (procedure),y,direct mapping +74015002,Pneumonopathy due to inhalation of dust (disorder),y,direct mapping +196125002,Diffuse interstitial pulmonary fibrosis (disorder),y,direct mapping +398640008,Rheumatoid pneumoconiosis (disorder),y,direct mapping +233634002,Post-lung transplantation bronchiectasis (disorder),y,direct mapping +429332008,Transplantation of single lobe of lung (procedure),y,direct mapping +198401000000104,Chronic obstructive pulmonary disease disturbs sleep (finding),y,direct mapping +48347002,Humidifier lung (disorder),y,direct mapping +233632003,Bronchiectasis caused by toxic aspiration (disorder),y,direct mapping +233615002,Chronic pulmonary coccidioidomycosis (disorder),y,direct mapping +155597006,Aspiration pneumonitis (disorder),y,direct mapping +49840000,Complicated silicosis (disorder),y,direct mapping +49691004,Occupational bronchitis (disorder),y,direct mapping +233772001,Sarcoid pulmonary calcification (disorder),y,direct mapping +717521000000104,Chronic obstructive pulmonary disease monitoring third letter (procedure),y,direct mapping +233699009,Pyrethrum alveolitis (disorder),y,direct mapping +56968009,Wood asthma (disorder),y,direct mapping +810951000000101,Chronic obstructive pulmonary disease self-management plan review (procedure),y,direct mapping +848431000000106,Chronic obstructive pulmonary disease care pathway (regime/therapy),y,direct mapping +89549007,Catarrhal bronchitis (disorder),y,direct mapping +135836000,End stage chronic obstructive airways disease (disorder),y,direct mapping +232659001,Double lung transplant as a block (procedure),y,direct mapping +233630006,Obstructive bronchiectasis (disorder),y,direct mapping +892321000000109,Chronic obstructive pulmonary disease management plan declined (situation),y,direct mapping +1066231000000103,Chronic obstructive pulmonary disease monitoring email invitation (procedure),y,direct mapping +17385007,Graphite fibrosis of lung (disorder),y,direct mapping +233762004,Chronic silicosis (disorder),y,direct mapping +44549008,Aspiration pneumonia resulting from a procedure (disorder),y,direct mapping +401185004,Chronic obstructive pulmonary disease monitoring by doctor (regime/therapy),y,direct mapping +71193007,Fibrosis of lung following radiation (disorder),y,direct mapping +233753001,Subacute berylliosis (disorder),y,direct mapping +47895001,Congenital emphysema (disorder),y,direct mapping +7457009,Chronic tracheitis (disorder),y,direct mapping +233728004,Cholesterol pneumonia (disorder),y,direct mapping +723245007,Number of chronic obstructive pulmonary disease exacerbations in past year (observable entity),y,direct mapping +120639003,Hantavirus pulmonary syndrome (disorder),y,direct mapping +50076003,Baritosis (disorder),y,direct mapping +52571006,Chronic tracheobronchitis (disorder),y,direct mapping +233697006,New Guinea lung (disorder),y,direct mapping +16623004,Coffee-workers' lung (disorder),y,direct mapping +196028003,Chronic pulmonary fibrosis caused by chemical fumes (disorder),y,direct mapping +84004001,Radiation pneumonitis (disorder),y,direct mapping +19274004,Grain-handlers' disease (disorder),y,direct mapping +716311000000100,Excepted from chronic obstructive pulmonary disease quality indicators - patient unsuitable (finding),y,direct mapping +233695003,Dry rot lung (disorder),y,direct mapping +438773007,Recurrent pulmonary embolism (disorder),y,direct mapping +717021000000106,Chronic obstructive pulmonary disease monitoring second letter (procedure),y,direct mapping +233666007,Young's syndrome (disorder),y,direct mapping +233665006,Immotile cilia syndrome due to excessively long cilia (disorder),y,direct mapping +233677001,Scar emphysema (disorder),y,direct mapping +233629001,Idiopathic bronchiectasis (disorder),y,direct mapping +413845009,Chronic obstructive pulmonary disease accident and emergency attendance since last visit (regime/therapy),y,direct mapping +233663004,Primary ciliary dyskinesia due to transposition of ciliary microtubules (disorder),y,direct mapping +704121003,Step up change in chronic obstructive pulmonary disease management plan (regime/therapy),y,direct mapping +40527005,Idiopathic pulmonary hemosiderosis (disorder),y,direct mapping +1066821000000101,Chronic obstructive pulmonary disease monitoring short message service text message first invitation (procedure),y,direct mapping +277485007,Secondary pulmonary hypoplasia (disorder),y,direct mapping +361194002,Perinatal pulmonary fibroplasia (disorder),y,direct mapping +170628003,Airways obstruction irreversible (finding),y,direct mapping +86638007,Maple-bark strippers' lung (disorder),y,direct mapping +61233003,Silo-fillers' disease (disorder),y,direct mapping +599006,Chronic pneumothorax (disorder),y,direct mapping +233767005,Stage 1 pulmonary sarcoidosis (disorder),y,direct mapping +897311000000101,Shared care chronic obstructive pulmonary disease monitoring (regime/therapy),y,direct mapping +715069001,Aspiration pneumonitis of fetus (disorder),y,direct mapping +826111000000109,On chronic obstructive pulmonary disease supportive care pathway (finding),y,direct mapping +233748006,Simple pneumoconiosis (disorder),y,direct mapping +233703007,Interstitial lung disease (disorder),y,direct mapping +233627004,Congenital cystic bronchiectasis (disorder),y,direct mapping +313299006,Severe chronic obstructive pulmonary disease (disorder),y,direct mapping +1092361000119109,Rubella pneumonia (disorder),y,descendant of concept mapped from leaf +51068008,Adult bronchiectasis (disorder),y,descendant of concept mapped from leaf +86649001,Meconium pneumonitis (disorder),y,descendant of concept mapped from leaf +46207001,Pneumonitis caused by acquired toxoplasmosis (disorder),y,descendant of concept mapped from leaf +408681003,Healthcare associated legionnaire's disease (disorder),y,descendant of concept mapped from leaf +427046006,Drug-induced pneumonitis (disorder),y,descendant of concept mapped from leaf +240387006,Pulmonary glanders (disorder),y,descendant of concept mapped from leaf +427445002,Tension pneumomediastinum (disorder),y,descendant of concept mapped from leaf +129452008,Nonspecific interstitial pneumonia (disorder),y,descendant of concept mapped from leaf +41381004,Pneumonia caused by Pseudomonas (disorder),y,descendant of concept mapped from leaf +233620002,Pneumonia due to parasitic infestation (disorder),y,descendant of concept mapped from leaf +40640008,Massive fibrosis of lung co-occurrent and due to silicosis (disorder),y,descendant of concept mapped from leaf +763888005,Necrotizing pneumonia caused by Panton-Valentine leukocidin producing Staphylococcus aureus (disorder),y,descendant of concept mapped from leaf +707507003,Pneumonia caused by Schistosoma japonicum (disorder),y,descendant of concept mapped from leaf +19076009,Sick building syndrome (disorder),y,descendant of concept mapped from leaf +200049006,Obstetric anesthesia with pulmonary complications - delivered (disorder),y,descendant of concept mapped from leaf +196040003,Aspiration pneumonitis due to anesthesia during labor and delivery (disorder),y,descendant of concept mapped from leaf +278484009,Tropical pulmonary eosinophilia (disorder),y,descendant of concept mapped from leaf +420544002,Bacterial pneumonia associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +426696003,Lingular pneumonia (disorder),y,descendant of concept mapped from leaf +88687001,Manganese pneumonitis (disorder),y,descendant of concept mapped from leaf +196152007,Pulmonary insufficiency following surgery (disorder),y,descendant of concept mapped from leaf +53084003,Bacterial pneumonia (disorder),y,descendant of concept mapped from leaf +59940009,Hypersensitivity alveolitis in lungworm infection (disorder),y,descendant of concept mapped from leaf +87153008,Pulmonary alveolar microlithiasis (disorder),y,descendant of concept mapped from leaf +59475000,Pneumonia in pertussis (disorder),y,descendant of concept mapped from leaf +301004001,Right upper zone pneumonia (disorder),y,descendant of concept mapped from leaf +23958009,Vanishing lung (disorder),y,descendant of concept mapped from leaf +366971000119100,Azoospermia due to infectious disease (disorder),y,descendant of concept mapped from leaf +707508008,Pneumonia caused by Schistosoma haematobium (disorder),y,descendant of concept mapped from leaf +725052002,Fetal cystic fibrosis (disorder),y,descendant of concept mapped from leaf +427670006,Azoospermia due to drug (disorder),y,descendant of concept mapped from leaf +102361000119104,Chronic pneumonia (disorder),y,descendant of concept mapped from leaf +233604007,Pneumonia (disorder),y,descendant of concept mapped from leaf +10625271000119109,Bronchopneumonia caused by Human metapneumovirus (disorder),y,descendant of concept mapped from leaf +124691000119101,Pneumonia caused by methicillin resistant Staphylococcus aureus (disorder),y,descendant of concept mapped from leaf +128711000119106,Pneumonia caused by methicillin susceptible Staphylococcus aureus (disorder),y,descendant of concept mapped from leaf +233613009,Fungal pneumonia (disorder),y,descendant of concept mapped from leaf +70756004,Bronchial atresia with segmental pulmonary emphysema (disorder),y,descendant of concept mapped from leaf +441658007,Pneumonia caused by Staphylococcus aureus (disorder),y,descendant of concept mapped from leaf +71727007,Induration of lung (disorder),y,descendant of concept mapped from leaf +196151000,Pulmonary insufficiency following shock (disorder),y,descendant of concept mapped from leaf +10625431000119105,Bronchopneumonia caused by Mycoplasma pneumoniae (disorder),y,descendant of concept mapped from leaf +724500003,Idiopathic chronic eosinophilic pneumonia (disorder),y,descendant of concept mapped from leaf +34004002,Siderosilicosis (disorder),y,descendant of concept mapped from leaf +10625671000119106,Bronchopneumonia caused by Streptococcus (disorder),y,descendant of concept mapped from leaf +57463004,Pneumonitis caused by inhaled liquid (disorder),y,descendant of concept mapped from leaf +28791000119105,Chronic coccidioidomycotic pneumonia (disorder),y,descendant of concept mapped from leaf +195886008,Group B streptococcal pneumonia (disorder),y,descendant of concept mapped from leaf +142931000119100,Pneumonia caused by H1N1 influenza (disorder),y,descendant of concept mapped from leaf +707766007,Exocrine pancreatic manifestation co-occurrent and due to cystic fibrosis (disorder),y,descendant of concept mapped from leaf +28295001,Middle lobe syndrome (disorder),y,descendant of concept mapped from leaf +83608006,Aspiration pneumonia caused by inhalation of milk (disorder),y,descendant of concept mapped from leaf +16846004,Obstructive emphysema (disorder),y,descendant of concept mapped from leaf +277869007,Non-tuberculous mycobacterial pneumonia (disorder),y,descendant of concept mapped from leaf +10625711000119105,Bronchopneumonia caused by Streptococcus pneumoniae (disorder),y,descendant of concept mapped from leaf +425996009,Bilateral basal pneumonia (disorder),y,descendant of concept mapped from leaf +181007,Hemorrhagic bronchopneumonia (disorder),y,descendant of concept mapped from leaf +195888009,Proteus pneumonia (disorder),y,descendant of concept mapped from leaf +430395005,Pneumonia caused by Gram negative bacteria (disorder),y,descendant of concept mapped from leaf +707551007,Pulmonary interstitial glycogenosis (disorder),y,descendant of concept mapped from leaf +301002002,Left upper zone pneumonia (disorder),y,descendant of concept mapped from leaf +233609002,Pneumonia caused by Chlamydiaceae (disorder),y,descendant of concept mapped from leaf +445096001,Pneumonia caused by Human metapneumovirus (disorder),y,descendant of concept mapped from leaf +206286008,Congenital Escherichia coli pneumonia (disorder),y,descendant of concept mapped from leaf +52500008,Saccular bronchiectasis (disorder),y,descendant of concept mapped from leaf +31898008,Paraseptal emphysema (disorder),y,descendant of concept mapped from leaf +328661000119108,Interstitial lung disease of childhood (disorder),y,descendant of concept mapped from leaf +186195008,"Tuberculosis of lung, confirmed histologically (disorder)",y,descendant of concept mapped from leaf +39172002,Pneumonia caused by Proteus mirabilis (disorder),y,descendant of concept mapped from leaf +200050006,Obstetric anesthesia with pulmonary complications - delivered with postnatal problem (disorder),y,descendant of concept mapped from leaf +58890000,Adenoviral bronchopneumonia (disorder),y,descendant of concept mapped from leaf +46970008,Pneumonia caused by Mycoplasma pneumoniae (disorder),y,descendant of concept mapped from leaf +725415009,House allergic alveolitis (disorder),y,descendant of concept mapped from leaf +10625111000119106,Bronchopneumonia caused by Escherichia coli (disorder),y,descendant of concept mapped from leaf +716088000,Follicular hamartoma with alopecia and cystic fibrosis syndrome (disorder),y,descendant of concept mapped from leaf +714203003,Acute bronchitis co-occurrent with bronchiectasis (disorder),y,descendant of concept mapped from leaf +722913002,Congenital pulmonary hypoplasia due to lung space occupying lesion (disorder),y,descendant of concept mapped from leaf +721095007,"Diaphragmatic defect, limb deficiency, skull defect syndrome (disorder)",y,descendant of concept mapped from leaf +425464007,Nosocomial pneumonia (disorder),y,descendant of concept mapped from leaf +7678002,Cytomegaloviral pneumonia (disorder),y,descendant of concept mapped from leaf +417688002,Chronic progressive coccidioidal pneumonia (disorder),y,descendant of concept mapped from leaf +415125002,Pneumocystosis jirovecii pneumonia (disorder),y,descendant of concept mapped from leaf +64880000,Parainfluenza virus bronchopneumonia (disorder),y,descendant of concept mapped from leaf +195896004,Pneumonia caused by pleuropneumonia-like organism (disorder),y,descendant of concept mapped from leaf +737181009,Interstitial lung disease due to systemic disease (disorder),y,descendant of concept mapped from leaf +409664000,Pneumonia caused by anaerobic bacteria (disorder),y,descendant of concept mapped from leaf +233607000,Pneumococcal pneumonia (disorder),y,descendant of concept mapped from leaf +12310001,Childhood bronchiectasis (disorder),y,descendant of concept mapped from leaf +59773008,Simple pulmonary alveolitis (disorder),y,descendant of concept mapped from leaf +276693005,Congenital bacterial pneumonia (disorder),y,descendant of concept mapped from leaf +196112005,Abscess of lung with pneumonia (disorder),y,descendant of concept mapped from leaf +236793007,Azoospermia with absent vasa in association with cystic fibrosis trait (disorder),y,descendant of concept mapped from leaf +10625151000119107,Bronchopneumonia caused by Group A Streptococcus (disorder),y,descendant of concept mapped from leaf +426437004,Familial idiopathic pulmonary fibrosis (disorder),y,descendant of concept mapped from leaf +1092951000119106,Pneumonia caused by Bordetella parapertussis (disorder),y,descendant of concept mapped from leaf +195902009,Anthrax pneumonia (disorder),y,descendant of concept mapped from leaf +72854003,Aspiration pneumonia due to near drowning (disorder),y,descendant of concept mapped from leaf +416916004,Lipoid pneumonitis (disorder),y,descendant of concept mapped from leaf +312342009,Infective pneumonia (disorder),y,descendant of concept mapped from leaf +720469008,Azoospermia caused by chemotherapy (disorder),y,descendant of concept mapped from leaf +64917006,Parainfluenza virus pneumonia (disorder),y,descendant of concept mapped from leaf +206289001,Congenital chlamydial pneumonia (disorder),y,descendant of concept mapped from leaf +276695003,Neonatal aspiration pneumonia (disorder),y,descendant of concept mapped from leaf +37711000,Cadmium pneumonitis (disorder),y,descendant of concept mapped from leaf +408680002,Healthcare associated bacterial pneumonia (disorder),y,descendant of concept mapped from leaf +15708009,Benign pneumoconiosis (disorder),y,descendant of concept mapped from leaf +724499007,Idiopathic acute eosinophilic pneumonia (disorder),y,descendant of concept mapped from leaf +415126001,Pneumonitis caused by inhaled substance (disorder),y,descendant of concept mapped from leaf +75426006,Aspiration pneumonia caused by regurgitated food (disorder),y,descendant of concept mapped from leaf +60805002,Hemolytic anemia with emphysema AND cutis laxa (disorder),y,descendant of concept mapped from leaf +44547005,Chalicosis (disorder),y,descendant of concept mapped from leaf +195900001,Pneumonia co-occurrent and due to measles (disorder),y,descendant of concept mapped from leaf +45556008,Pulmonary tularemia (disorder),y,descendant of concept mapped from leaf +233617005,Hemorrhagic pneumonia (disorder),y,descendant of concept mapped from leaf +301001009,Right lower zone pneumonia (disorder),y,descendant of concept mapped from leaf +240391001,Pulmonary melioidosis (disorder),y,descendant of concept mapped from leaf +78895009,Congenital pneumonia (disorder),y,descendant of concept mapped from leaf +10625351000119105,Bronchopneumonia caused by methicillin resistant Staphylococcus aureus (disorder),y,descendant of concept mapped from leaf +3487004,Candidiasis of lung (disorder),y,descendant of concept mapped from leaf +12181002,Tropical pulmonary alveolitis (disorder),y,descendant of concept mapped from leaf +233731003,Traumatic pneumonia (disorder),y,descendant of concept mapped from leaf +10624991000119103,Bronchopneumonia caused by Achromobacter (disorder),y,descendant of concept mapped from leaf +34020007,Pneumonia caused by Streptococcus (disorder),y,descendant of concept mapped from leaf +1033111000000104,Influenza with pneumonia due to seasonal influenza virus (disorder),y,descendant of concept mapped from leaf +63607006,Perinatal pneumomediastinum (disorder),y,descendant of concept mapped from leaf +196034005,Pneumonitis caused by inhalation of milk (disorder),y,descendant of concept mapped from leaf +233619008,Neonatal pneumonia (disorder),y,descendant of concept mapped from leaf +708537005,Acute idiopathic pulmonary fibrosis (disorder),y,descendant of concept mapped from leaf +240741002,Acute pulmonary African histoplasmosis (disorder),y,descendant of concept mapped from leaf +737183007,Interstitial lung disease due to metabolic disease (disorder),y,descendant of concept mapped from leaf +22343003,Pneumonitis caused by fumes AND/OR vapors (disorder),y,descendant of concept mapped from leaf +733453005,"Congenital nephrotic syndrome, interstitial lung disease, epidermolysis bullosa syndrome (disorder)",y,descendant of concept mapped from leaf +233623000,Mononuclear interstitial pneumonia (disorder),y,descendant of concept mapped from leaf +385093006,Community acquired pneumonia (disorder),y,descendant of concept mapped from leaf +10625591000119108,Bronchopneumonia caused by Staphylococcus (disorder),y,descendant of concept mapped from leaf +737180005,Chronic bronchiolitis (disorder),y,descendant of concept mapped from leaf +71926009,Infective pneumonia acquired prenatally (disorder),y,descendant of concept mapped from leaf +735465007,Protracted bronchitis caused by bacterium (disorder),y,descendant of concept mapped from leaf +195911009,Chickenpox pneumonia (disorder),y,descendant of concept mapped from leaf +733051000,Pneumonia caused by Gram positive bacteria (disorder),y,descendant of concept mapped from leaf +213152006,Heart-lung transplant failure and rejection (disorder),y,descendant of concept mapped from leaf +191727003,Post measles pneumonia (disorder),y,descendant of concept mapped from leaf +89687005,Postimmersion-submersion syndrome (disorder),y,descendant of concept mapped from leaf +11944003,Feather-pickers' disease (disorder),y,descendant of concept mapped from leaf +10625751000119106,Bronchopneumonia due to virus (disorder),y,descendant of concept mapped from leaf +106001000119101,Chronic obstructive lung disease co-occurrent with acute bronchitis (disorder),y,descendant of concept mapped from leaf +233622005,Infectious mononucleosis pneumonia (disorder),y,descendant of concept mapped from leaf +308906005,Secondary bacterial pneumonia (disorder),y,descendant of concept mapped from leaf +430969000,Recurrent aspiration pneumonia (disorder),y,descendant of concept mapped from leaf +10625471000119108,Bronchopneumonia caused by Proteus mirabilis (disorder),y,descendant of concept mapped from leaf +10672271000119100,Acute-on-chronic hypoxemic respiratory failure (disorder),y,descendant of concept mapped from leaf +186177005,Tuberculosis of lung with cavitation (disorder),y,descendant of concept mapped from leaf +713525001,Recurrent bacterial pneumonia (disorder),y,descendant of concept mapped from leaf +83271005,Chronic laryngotracheitis (disorder),y,descendant of concept mapped from leaf +45312009,Pneumonia in typhoid fever (disorder),y,descendant of concept mapped from leaf +123587001,Acute bronchopneumonia (disorder),y,descendant of concept mapped from leaf +762271004,Subclinical cystic fibrosis (disorder),y,descendant of concept mapped from leaf +276692000,Congenital viral pneumonia (disorder),y,descendant of concept mapped from leaf +10625231000119106,Bronchopneumonia caused by Haemophilus influenzae (disorder),y,descendant of concept mapped from leaf +206283000,Congenital staphylococcal pneumonia (disorder),y,descendant of concept mapped from leaf +64030005,Pneumonitis caused by solids (disorder),y,descendant of concept mapped from leaf +186203002,"Tuberculosis of lung, bacteriologically and histologically negative (disorder)",y,descendant of concept mapped from leaf +10625071000119104,Bronchopneumonia caused by bacteria (disorder),y,descendant of concept mapped from leaf +722912007,Congenital pulmonary hypoplasia due to prolonged premature rupture of membranes (disorder),y,descendant of concept mapped from leaf +72656004,Granulomatous pneumonia (disorder),y,descendant of concept mapped from leaf +233618000,Mycobacterial pneumonia (disorder),y,descendant of concept mapped from leaf +186175002,Infiltrative lung tuberculosis (disorder),y,descendant of concept mapped from leaf +233624006,Herpes simplex pneumonia (disorder),y,descendant of concept mapped from leaf +441590008,Pneumonia caused by Severe acute respiratory syndrome coronavirus (disorder),y,descendant of concept mapped from leaf +707553005,Chronic exogenous lipoid pneumonia (disorder),y,descendant of concept mapped from leaf +143111000119103,Pneumonia caused by avian influenza (disorder),y,descendant of concept mapped from leaf +187196002,Toxoplasma pneumonitis (disorder),y,descendant of concept mapped from leaf +42004004,Aspiration pneumonia caused by inhalation of vomitus (disorder),y,descendant of concept mapped from leaf +195878008,Pneumonia and influenza (disorder),y,descendant of concept mapped from leaf +233608005,Meningococcal pneumonia (disorder),y,descendant of concept mapped from leaf +186204008,"Tuberculosis of lung, bacteriological and histological examination not done (disorder)",y,descendant of concept mapped from leaf +80602006,Nodular tuberculosis of lung (disorder),y,descendant of concept mapped from leaf +233606009,Atypical pneumonia (disorder),y,descendant of concept mapped from leaf +319841000119107,Rheumatoid lung disease with rheumatoid arthritis (disorder),y,descendant of concept mapped from leaf +55679008,Peribronchial pneumonia (disorder),y,descendant of concept mapped from leaf +713544008,Bacterial pneumonia co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +233716007,Micronodular pulmonary ossification (disorder),y,descendant of concept mapped from leaf +80614003,Prolonged pulmonary alveolitis (disorder),y,descendant of concept mapped from leaf +196032009,Pneumonitis due to inhalation of food or vomitus (disorder),y,descendant of concept mapped from leaf +123588006,Confluent bronchopneumonia with abscess formation (disorder),y,descendant of concept mapped from leaf +123590007,Focal pneumonia (disorder),y,descendant of concept mapped from leaf +66110007,Chronic diffuse emphysema caused by inhalation of chemical fumes AND/OR vapors (disorder),y,descendant of concept mapped from leaf +31561003,Hypostatic bronchopneumonia (disorder),y,descendant of concept mapped from leaf +206287004,Congenital pseudomonal pneumonia (disorder),y,descendant of concept mapped from leaf +2523007,Salmonella pneumonia (disorder),y,descendant of concept mapped from leaf +196035006,Pneumonitis caused by inhalation of vomitus (disorder),y,descendant of concept mapped from leaf +83457000,Cylindrical bronchiectasis (disorder),y,descendant of concept mapped from leaf +57702005,Unresolved pneumonia (disorder),y,descendant of concept mapped from leaf +2912004,Cystic-bullous disease of the lung (disorder),y,descendant of concept mapped from leaf +65141002,Foreign body pneumonia (disorder),y,descendant of concept mapped from leaf +89099002,Chronic allergic bronchitis (disorder),y,descendant of concept mapped from leaf +84753008,Pneumonia in systemic mycosis (disorder),y,descendant of concept mapped from leaf +442094008,Pneumonia caused by Histoplasma (disorder),y,descendant of concept mapped from leaf +86680006,Ruptured emphysematous bleb of lung (disorder),y,descendant of concept mapped from leaf +407671000,Bilateral pneumonia (disorder),y,descendant of concept mapped from leaf +707552000,Acute exogenous lipoid pneumonia (disorder),y,descendant of concept mapped from leaf +67525007,Secondary pneumonic plague (disorder),y,descendant of concept mapped from leaf +198014000,Acquired obstructive azoospermia (disorder),y,descendant of concept mapped from leaf +762269004,Classical cystic fibrosis (disorder),y,descendant of concept mapped from leaf +233714005,Diffuse infiltrative lung disease (disorder),y,descendant of concept mapped from leaf +10625831000119107,Chemical pneumonitis caused by anesthesia (disorder),y,descendant of concept mapped from leaf +421508002,Viral pneumonia associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +10625311000119109,Bronchopneumonia caused by Klebsiella pneumoniae (disorder),y,descendant of concept mapped from leaf +240629003,Malarial shock lung (disorder),y,descendant of concept mapped from leaf +38976008,Pneumonic plague (disorder),y,descendant of concept mapped from leaf +471272001,Cavitary pneumonia (disorder),y,descendant of concept mapped from leaf +47082005,Congenital rubella pneumonitis (disorder),y,descendant of concept mapped from leaf +240871004,Capillaria aerophila chest infection (disorder),y,descendant of concept mapped from leaf +408679000,Healthcare associated pneumonia (disorder),y,descendant of concept mapped from leaf +85469005,Hypostatic pneumonia (disorder),y,descendant of concept mapped from leaf +18354001,Chronic induration of lung (disorder),y,descendant of concept mapped from leaf +72270005,Collagenous pneumoconiosis (disorder),y,descendant of concept mapped from leaf +707373004,Plasma cell granuloma of lung (disorder),y,descendant of concept mapped from leaf +57686001,Emphysematous bleb of lung (disorder),y,descendant of concept mapped from leaf +10625391000119100,Bronchopneumonia caused by methicillin susceptible Staphylococcus aureus (disorder),y,descendant of concept mapped from leaf +10613001,Acute berylliosis (disorder),y,descendant of concept mapped from leaf +7361000175106,Acute-on-chronic hypercapnic respiratory failure (disorder),y,descendant of concept mapped from leaf +401000119107,Asthma with irreversible airway obstruction (disorder),y,descendant of concept mapped from leaf +278516003,Lobar pneumonia (disorder),y,descendant of concept mapped from leaf +236807008,Congenital obstructive azoospermia (disorder),y,descendant of concept mapped from leaf +765275003,Male infertility with azoospermia due to single gene mutation (disorder),y,descendant of concept mapped from leaf +314978007,Postoperative pneumonia (disorder),y,descendant of concept mapped from leaf +240742009,Chronic pulmonary African histoplasmosis (disorder),y,descendant of concept mapped from leaf +396285007,Bronchopneumonia (disorder),y,descendant of concept mapped from leaf +708026002,Chronic pneumonitis of infancy (disorder),y,descendant of concept mapped from leaf +708030004,Pulmonary emphysema co-occurrent with fibrosis of lung (disorder),y,descendant of concept mapped from leaf +86294001,Pneumonitis caused by inhalation of essence (disorder),y,descendant of concept mapped from leaf +32139003,Mixed dust pneumoconiosis (disorder),y,descendant of concept mapped from leaf +10692721000119102,Chronic obstructive asthma co-occurrent with acute exacerbation of asthma (disorder),y,descendant of concept mapped from leaf +12571000132104,Pneumonitis due to Herpes zoster (disorder),y,descendant of concept mapped from leaf +762270003,Atypical cystic fibrosis (disorder),y,descendant of concept mapped from leaf +708031000,Idiopathic eosinophilic pneumonia (disorder),y,descendant of concept mapped from leaf +81554001,Tuberculosis of lung with involvement of bronchus (disorder),y,descendant of concept mapped from leaf +195909000,Nocardial pneumonia (disorder),y,descendant of concept mapped from leaf +10625191000119102,Bronchopneumonia caused by Group B Streptococcus (disorder),y,descendant of concept mapped from leaf +196115007,Pulmonary congestion and hypostasis (disorder),y,descendant of concept mapped from leaf +1751000119100,Acute exacerbation of chronic obstructive airways disease with asthma (disorder),y,descendant of concept mapped from leaf +196033004,Pneumonitis caused by inhalation of regurgitated food (disorder),y,descendant of concept mapped from leaf +430476004,Diffuse panbronchiolitis (disorder),y,descendant of concept mapped from leaf +233715006,Idiopathic diffuse pulmonary ossification (disorder),y,descendant of concept mapped from leaf +81164001,Ornithosis with pneumonia (disorder),y,descendant of concept mapped from leaf +736056000,Asthma clinical management plan (record artifact),y,descendant of concept mapped from leaf +40786001,Aspiration pneumonia caused by regurgitated gastric secretions (disorder),y,descendant of concept mapped from leaf +123589003,Necrotizing bronchopneumonia (disorder),y,descendant of concept mapped from leaf +10625511000119104,Bronchopneumonia caused by Pseudomonas (disorder),y,descendant of concept mapped from leaf +699014000,Recurrent pneumonia (disorder),y,descendant of concept mapped from leaf +206284006,Congenital group A hemolytic streptococcal pneumonia (disorder),y,descendant of concept mapped from leaf +427121008,Azoospermia due to obstruction (disorder),y,descendant of concept mapped from leaf +66429007,Unresolved lobar pneumonia (disorder),y,descendant of concept mapped from leaf +724498004,Pneumonia caused by Chlamydia pneumoniae (disorder),y,descendant of concept mapped from leaf +38699009,Pneumonia caused by Histoplasma capsulatum (disorder),y,descendant of concept mapped from leaf +111900000,Pneumonia in aspergillosis (disorder),y,descendant of concept mapped from leaf +233717003,Diffuse pulmonary neurofibromatosis (disorder),y,descendant of concept mapped from leaf +446946005,Reinfection pulmonary tuberculosis (disorder),y,descendant of concept mapped from leaf +195904005,Pneumonia with coccidioidomycosis (disorder),y,descendant of concept mapped from leaf +200052003,Obstetric anesthesia with pulmonary complications with postnatal problem (disorder),y,descendant of concept mapped from leaf +32204007,Pulmonary actinobacillosis (disorder),y,descendant of concept mapped from leaf +425793006,Azoospermia due to systemic disease (disorder),y,descendant of concept mapped from leaf +41269000,Influenzal bronchopneumonia (disorder),y,descendant of concept mapped from leaf +187052004,Pulmonary African histoplasmosis (disorder),y,descendant of concept mapped from leaf +35031000119100,Acute aspiration pneumonia (disorder),y,descendant of concept mapped from leaf +441942006,Pneumonia caused by infection caused by Streptococcus pyogenes (disorder),y,descendant of concept mapped from leaf +447006007,Relapse pulmonary tuberculosis (disorder),y,descendant of concept mapped from leaf +206285007,Congenital group B hemolytic streptococcal pneumonia (disorder),y,descendant of concept mapped from leaf +713526000,Recurrent bacterial pneumonia co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +233610007,Neonatal chlamydial pneumonia (disorder),y,descendant of concept mapped from leaf +233621003,Rickettsial pneumonia (disorder),y,descendant of concept mapped from leaf +716198008,Growth delay with hydrocephalus and lung hypoplasia syndrome (disorder),y,descendant of concept mapped from leaf +266370006,Trauma and postoperative pulmonary insufficiency (disorder),y,descendant of concept mapped from leaf +371072008,Postobstructive pneumonia (disorder),y,descendant of concept mapped from leaf +707433009,Lymphangioleiomyomatosis due to tuberous sclerosis syndrome (disorder),y,descendant of concept mapped from leaf +302913000,Diffuse pulmonary calcinosis (disorder),y,descendant of concept mapped from leaf +10625631000119108,Bronchopneumonia caused by Staphylococcus aureus (disorder),y,descendant of concept mapped from leaf +426853005,Pneumoconiosis caused by silicate (disorder),y,descendant of concept mapped from leaf +301000005,Left lower zone pneumonia (disorder),y,descendant of concept mapped from leaf +80003002,Tuberculous pneumonia (disorder),y,descendant of concept mapped from leaf +240747003,Chronic pulmonary blastomycosis (disorder),y,descendant of concept mapped from leaf +700252003,Subacute idiopathic pulmonary fibrosis (disorder),y,descendant of concept mapped from leaf +31920006,Hemorrhagic varicella pneumonitis (disorder),y,descendant of concept mapped from leaf +429271009,Ventilator-acquired pneumonia (disorder),y,descendant of concept mapped from leaf +266350000,Pneumococcal lobar pneumonia (disorder),y,descendant of concept mapped from leaf +697923008,Pulmonary hypertension in lymphangioleiomyomatosis (disorder),y,descendant of concept mapped from leaf +32544004,Chronic obliterative bronchiolitis caused by inhalation of chemical fumes AND/OR vapors (disorder),y,descendant of concept mapped from leaf +86263001,Cobaltosis (disorder),y,descendant of concept mapped from leaf +64479007,Pneumonia caused by Klebsiella pneumoniae (disorder),y,descendant of concept mapped from leaf +735466008,Pneumonitis due to aspiration of blood (disorder),y,descendant of concept mapped from leaf +47938003,Chronic obliterative bronchiolitis (disorder),y,descendant of concept mapped from leaf +713084008,Pneumonia caused by Human coronavirus (disorder),y,descendant of concept mapped from leaf +195908008,Actinomycotic pneumonia (disorder),y,descendant of concept mapped from leaf +442025000,Acute exacerbation of chronic asthmatic bronchitis (disorder),y,descendant of concept mapped from leaf +366981000119102,Azoospermia caused by radiation (disorder),y,descendant of concept mapped from leaf +64667001,Interstitial pneumonia (disorder),y,descendant of concept mapped from leaf +41997000,Asthmatic pulmonary alveolitis (disorder),y,descendant of concept mapped from leaf +737182002,Interstitial lung disease due to granulomatous disease (disorder),y,descendant of concept mapped from leaf +438764004,Postoperative aspiration pneumonia (disorder),y,descendant of concept mapped from leaf +70036007,Haemophilus influenzae pneumonia (disorder),y,descendant of concept mapped from leaf +60485005,Pleurobronchopneumonia (disorder),y,descendant of concept mapped from leaf +13217005,Fusiform bronchiectasis (disorder),y,descendant of concept mapped from leaf +76090006,Pittsburgh pneumonia (disorder),y,descendant of concept mapped from leaf +19325002,Traction bronchiectasis (disorder),y,descendant of concept mapped from leaf +233691007,Asthmatic pulmonary eosinophilia (disorder),y,descendant of concept mapped from leaf +421671002,Pneumonia associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +1087061000119106,Gonococcal pneumonia (disorder),y,descendant of concept mapped from leaf +405569006,Post-radiotherapy pneumonitis (disorder),y,descendant of concept mapped from leaf +422588002,Aspiration pneumonia (disorder),y,descendant of concept mapped from leaf +233760007,Acute silicosis (disorder),y,descendant of concept mapped from leaf +75570004,Viral pneumonia (disorder),y,descendant of concept mapped from leaf +10625031000119102,Bronchopneumonia caused by anaerobic bacteria (disorder),y,descendant of concept mapped from leaf +421047005,Candidiasis of lung associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +409665004,Pneumonia caused by aerobic bacteria (disorder),y,descendant of concept mapped from leaf +22754005,Staphylococcal pneumonia (disorder),y,descendant of concept mapped from leaf +425558002,Azoospermia (disorder),y,descendant of concept mapped from leaf +293241000119100,Acute exacerbation of chronic obstructive bronchitis (disorder),y,descendant of concept mapped from leaf +40218008,Carbon electrode makers' pneumoconiosis (disorder),y,descendant of concept mapped from leaf +67782005,Acute respiratory distress syndrome (disorder),y,descendant of concept mapped from leaf +41207000,Adenoviral pneumonia (disorder),y,descendant of concept mapped from leaf +61884008,Achromobacter pneumonia (disorder),y,descendant of concept mapped from leaf +28122003,Pulmonary eosinophilic granuloma (disorder),y,descendant of concept mapped from leaf +277844007,Pulmonary lymphangioleiomyomatosis (disorder),y,descendant of concept mapped from leaf +38534008,Aspiration of stomach contents after anesthesia AND/OR sedation in labor AND/OR delivery (disorder),y,descendant of concept mapped from leaf +707449006,Exogenous lipoid pneumonia (disorder),y,descendant of concept mapped from leaf +700251005,Chronic idiopathic pulmonary fibrosis (disorder),y,descendant of concept mapped from leaf +154283005,Pulmonary tuberculosis (disorder),y,descendant of concept mapped from leaf +196037003,Pneumonitis caused by inhalation of oil or essence (disorder),y,descendant of concept mapped from leaf +1240551000000105,Pneumonia caused by severe acute respiratory syndrome coronavirus 2 (disorder),y,descendant of concept mapped from leaf +35339003,Primary pneumonic plague (disorder),y,descendant of concept mapped from leaf +51530003,Pneumonia caused by Escherichia coli (disorder),y,descendant of concept mapped from leaf +33548005,Anthracosilicosis (disorder),y,descendant of concept mapped from leaf +50804000,Catarrhal pneumonia (disorder),y,descendant of concept mapped from leaf +200051005,Obstetric anesthesia with pulmonary complications with antenatal problem (disorder),y,descendant of concept mapped from leaf +64936001,Löffler's syndrome (disorder),y,descendant of concept mapped from leaf +704120002,Change in chronic obstructive pulmonary disease management plan (regime/therapy),y,descendant of concept mapped from leaf +240635003,Pneumonia caused by Leishmania (disorder),y,descendant of concept mapped from leaf +420787001,Pneumococcal pneumonia associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +195889001,Legionella pneumonia (disorder),y,descendant of concept mapped from leaf +68409003,Organized pneumonia (disorder),y,descendant of concept mapped from leaf +16311000119108,Pneumonia caused by influenza (disorder),y,descendant of concept mapped from leaf +707503004,Pneumonia caused by Schistosoma mansoni (disorder),y,descendant of concept mapped from leaf +26511004,Pneumoconiosis caused by sisal fiber (disorder),y,descendant of concept mapped from leaf +195881003,Pneumonia caused by respiratory syncytial virus (disorder),y,descendant of concept mapped from leaf +196153002,Pulmonary insufficiency following trauma (disorder),y,descendant of concept mapped from leaf +445378003,Acute exacerbation of bronchiectasis (disorder),y,descendant of concept mapped from leaf +186193001,"Tuberculosis of lung, confirmed by sputum microscopy with or without culture (disorder)",y,descendant of concept mapped from leaf +396286008,Bilateral bronchopneumonia (disorder),y,descendant of concept mapped from leaf +300999006,Basal pneumonia (disorder),y,descendant of concept mapped from leaf +233625007,Giant cell pneumonia (disorder),y,descendant of concept mapped from leaf +12381000132107,Idiopathic pneumonia syndrome (disorder),y,descendant of concept mapped from leaf +704345008,Chronic interstitial pneumonia (disorder),y,descendant of concept mapped from leaf +707435002,Neuroendocrine cell hyperplasia of infancy (disorder),y,descendant of concept mapped from leaf +1082721000119101,Pneumonia caused by Ascaris (disorder),y,descendant of concept mapped from leaf +737184001,Interstitial lung disease co-occurrent and due to systemic vasculitis (disorder),y,descendant of concept mapped from leaf +196116008,Pulmonary hypostasis (disorder),y,descendant of concept mapped from leaf +64703005,Terminal bronchopneumonia (disorder),y,descendant of concept mapped from leaf +301003007,Right middle zone pneumonia (disorder),y,descendant of concept mapped from leaf +123591006,Confluent pneumonia (disorder),y,descendant of concept mapped from leaf +35037009,Primary atypical interstitial pneumonia (disorder),y,descendant of concept mapped from leaf +186194007,"Tuberculosis of lung, confirmed by culture only (disorder)",y,descendant of concept mapped from leaf +720401009,Cystic fibrosis with gastritis and megaloblastic anemia syndrome (disorder),y,descendant of concept mapped from leaf +233614003,Pulmonary mucormycosis (disorder),y,descendant of concept mapped from leaf +428697002,Inactive tuberculosis of lung (disorder),y,descendant of concept mapped from leaf +10625551000119103,Bronchopneumonia caused by respiratory syncytial virus (disorder),y,descendant of concept mapped from leaf +32286006,Pneumonia in Q fever (disorder),y,descendant of concept mapped from leaf +700249006,Idiopathic interstitial pneumonia (disorder),y,descendant of concept mapped from leaf +207331000000102,Multiple chronic obstructive pulmonary disease emergency hospital admissions,n,via Query Table +207321000000104,Multiple chronic obstructive pulmonary disease emergency hospital admissions,n,via Query Table +169631000000104,Chronic obstructive pulmonary disease accident and emergency attendance since last visit,n,via Query Table +649131000000101,Simple chronic bronchitis NOS (disorder),n,via Query Table +432151000000100,[X]Pneumonia in bacterial diseases classified elsewhere (disorder),n,via Query Table +226461000000108,Single lobe lung transplant (procedure),n,via Query Table +313433007,Tuberculous cavity of lung (disorder),n,via Query Table +427069009,Azoospermia due to chemotherapy AND/OR radiation (disorder),n,via Query Table +414882007,Number of chronic obstructive pulmonary disease exacerbations in past year (finding),n,via Query Table +487261000000103,Chronic obstructive pulmonary disease patient unsuitable for pulmonary rehabilitation - enhanced services administration ,n,via Query Table +564541000000102,Other specified pulmonary tuberculosis (disorder),n,via Query Table +456031000000108,[X]Pneumonia in mycoses classified elsewhere (disorder),n,via Query Table +890871000000103,Chronic obstructive pulmonary disease written self management plan declined,n,via Query Table +174221000000108,Emergency chronic obstructive pulmonary disease admission since last appointment,n,via Query Table +432461000000108,[X]Pneumoconiosis due to other dust containing silica (disorder),n,via Query Table +781661000000103,Interstitial lung disease due to collagen vascular disease (disorder),n,via Query Table +64912000,Enzootic mycoplasmal pneumonia of swine (disorder),n,via Query Table +644271000000105,"Chronic obstructive pulmonary disease with acute exacerbation, unspecified (disorder)",n,via Query Table +778131000000103,Cystic fibrosis related cirrhosis,n,via Query Table +811971000000104,Congestive obstructive pulmonary disease self-management plan agreed ,n,via Query Table +523671000000103,Step up change in chronic obstructive pulmonary disease management plan (regime/therapy),n,via Query Table +195738009,Obliterating fibrous bronchiolitis (disorder),n,via Query Table +626081000000109,Bronchitis and pneumonitis due to chemical fumes NOS (disorder),n,via Query Table +414341000000100,[X]Pneumonia in viral diseases classified elsewhere (disorder),n,via Query Table +186726005,Human immunodeficiency virus disease resulting in lymphoid interstitial pneumonitis (disorder),n,via Query Table +57716000,Brooder pneumonia (disorder),n,via Query Table +88693009,AIDS with candidiasis of lung (disorder),n,via Query Table +579411000000108,Pulmonary tuberculosis NOS (disorder),n,via Query Table +213431000000100,Chronic obstructive pulmonary disease does not disturb sleep,n,via Query Table +1033131000000107,Pneumonia due to Gram negative bacteria (disorder),n,via Query Table +566801000000107,Other specified congenital pneumonia (disorder),n,via Query Table +192681000000108,Cryptogenic organising pneumonitis,n,via Query Table +412776001,Chronic obstructive pulmonary disease clinical management plan (qualifier value),n,via Query Table +419861000000108,[X]Other specified chronic obstructive pulmonary disease (disorder),n,via Query Table +823141000000101,Community acquired pneumonia (disorder),n,via Query Table +21072009,Gas bubble disease (disorder),n,via Query Table +834861000000109,Hospital acquired pneumonia,n,via Query Table +827581000000108,Has chronic obstructive pulmonary disease care plan ,n,via Query Table +939441000000104,History of bronchiectasis ,n,via Query Table +375871000000104,Referred for chronic obstructive pulmonary disease structured smoking assessment - enhanced services administration ,n,via Query Table +535011000000101,Interstitial lung disease NEC (disorder),n,via Query Table +383621000000108,At risk of chronic obstructive pulmonary disease exacerbation ,n,via Query Table +45157009,Idiopathic fibrosing alveolitis (disorder),n,via Query Table +196038008,Lipoid pneumonitis (disorder),n,via Query Table +195920000,"Influenza with pneumonia, influenza virus identified (disorder)",n,via Query Table +42964004,Influenza with pneumonia (disorder),n,via Query Table +718251000000105,Issue of chronic obstructive pulmonary disease rescue pack ,n,via Query Table +944961000000107,Asthma-chronic obstructive pulmonary disease overlap syndrome (disorder),n,via Query Table +174231000000105,Number of chronic obstructive pulmonary disease exacerbations in past year,n,via Query Table +454431000000109,[X]Pneumonia due to other aerobic gram-negative bacteria (disorder),n,via Query Table +420245002,Pneumonia due to Mannheimia haemolytica (disorder),n,via Query Table +47839005,Aspiration pneumonia (disorder),n,via Query Table +16810008,Acquired immunodeficiency syndrome (AIDS) with viral pneumonia (disorder),n,via Query Table +820351000000107,Chronic obstructive pulmonary disease rescue pack not indicated ,n,via Query Table +1033121000000105,Influenzal bronchopneumonia due to seasonal influenza virus ,n,via Query Table +233689004,Mill fever (disorder),n,via Query Table +174211000000102,Chronic obstructive pulmonary disease accident and emergency attendance since last visit,n,via Query Table +601611000000106,Bird-fancier's lung NOS (disorder),n,via Query Table +111282000,Acute respiratory insufficiency (disorder),n,via Query Table +807871000000104,Interstitial lung disease due to collagen vascular disease,n,via Query Table +419331000000108,[X]Other specified interstitial pulmonary diseases (disorder),n,via Query Table +83316006,Pneumoconiosis due to silicates (disorder),n,via Query Table +832441000000100,Hantavirus pulmonary syndrome,n,via Query Table +627021000000105,Chronic pulmonary radiation disease NOS (disorder),n,via Query Table +621061000000108,Other chronic bronchitis NOS (disorder),n,via Query Table +325371000000107,Chronic type 1 respiratory failure (disorder),n,via Query Table +389077007,Tuberculous pneumonia of animals (disorder),n,via Query Table +169651000000106,Number of chronic obstructive pulmonary disease exacerbations in past year,n,via Query Table +866911000000101,Eosinophilic bronchitis ,n,via Query Table +579421000000102,Other respiratory tuberculosis (disorder),n,via Query Table +526101000000108,Liver disease due to cystic fibrosis (disorder),n,via Query Table +685151000000101,Other aspiration pneumonia as a complication of care (disorder),n,via Query Table +429381000000103,[X]Other viral pneumonia (disorder),n,via Query Table +789761000000107,Chronic obstructive pulmonary disease medication optimisation ,n,via Query Table +250521000000103,Health education - chronic obstructive pulmonary disease ,n,via Query Table +554071000000106,Isolated tracheal or bronchial tuberculosis NOS (disorder),n,via Query Table +31886003,Bronchiolitis fibrosa obliterans (disorder),n,via Query Table +84234002,Equine allergic pneumonitis (disorder),n,via Query Table +397991000000107,[X]Other interstitial pulmonary diseases with fibrosis (disorder),n,via Query Table +807851000000108,Pulmonary fibrosis,n,via Query Table +233723008,Bronchiolitis obliterans with usual interstitial pneumonitis (disorder),n,via Query Table +312403005,Legionnaire's disease (disorder),n,via Query Table +526111000000105,Fibrosing colonopathy (disorder),n,via Query Table +670641000000109,Chemical respiratory disease NOS (disorder),n,via Query Table +1033141000000103,Pneumonia due to Gram negative bacteria ,n,via Query Table +339601000000108,Recurrent pulmonary embolism (disorder),n,via Query Table +375921000000108,Chronic obstructive pulmonary disease structured smoking assessment declined - enhanced services administration ,n,via Query Table +948111000000104,Telehealth chronic obstructive pulmonary disease monitoring (regime/therapy),n,via Query Table +604421000000104,Cystic fibrosis NOS (disorder),n,via Query Table +944971000000100,Asthma-chronic obstructive pulmonary disease overlap syndrome ,n,via Query Table +526211000000102,Complication of transplanted lung (disorder),n,via Query Table +848441000000102,Following chronic obstructive pulmonary disease care pathway protocol ,n,via Query Table +113071000000105,Chronic obstructive pulmonary disease monitoring phone invite (administrative concept),n,via Query Table +1761000119103,Chronic obstructive airway disease with asthma (disorder),n,via Query Table +397190009,Respiratory tuberculosis (disorder),n,via Query Table +834851000000106,Community acquired pneumonia,n,via Query Table +186191004,Isolated tracheal or bronchial tuberculosis NOS (disorder),n,via Query Table +213421000000102,Chronic obstructive pulmonary disease does not disturb sleep,n,via Query Table +122971000000108,Chronic obstructive pulmonary disease monitoring 2nd letter (administrative concept),n,via Query Table +649171000000104,Idiopathic fibrosing alveolitis NOS (disorder),n,via Query Table +294011000000104,Very severe chronic obstructive pulmonary disease ,n,via Query Table +586721000000108,Obstetric anesthesia with pulmonary complications NOS (disorder),n,via Query Table +807391000000107,Usual interstitial pneumonitis,n,via Query Table +707021000000109,Fibrosing colonopathy,n,via Query Table +686551000000103,Pulmonary hypostasis NOS (disorder),n,via Query Table +57086000,Enzootic pneumonia of calves (disorder),n,via Query Table +37721008,AIDS with pneumococcal pneumonia (disorder),n,via Query Table +645421000000106,Acute pulmonary radiation disease NOS (disorder),n,via Query Table +760611000000109,Chronic obstructive pulmonary disease 3 month review ,n,via Query Table +707001000000100,Cystic fibrosis with distal intestinal obstruction syndrome,n,via Query Table +113061000000103,Chronic obstructive pulmonary disease monitoring verbal invite (administrative concept),n,via Query Table +338131000000101,Chronic type 2 respiratory failure,n,via Query Table +441141000000108,[X]Pneumonia due to other aerobic gram-negative bacteria (disorder),n,via Query Table +113051000000101,Chronic obstructive pulmonary disease monitoring 3rd letter (administrative concept),n,via Query Table +204574007,Pulmonary hypoplasia (disorder),n,via Query Table +616161000000107,Influenza with pneumonia NOS (disorder),n,via Query Table +823151000000103,Hospital acquired pneumonia (disorder),n,via Query Table +169761000000104,Heart and lung transplant,n,via Query Table +169641000000108,Emergency chronic obstructive pulmonary disease admission since last appointment,n,via Query Table +60696005,AIDS with bacterial pneumonia (disorder),n,via Query Table +789751000000109,Chronic obstructive pulmonary disease medication optimisation (procedure),n,via Query Table +656891000000102,Lobar pneumonia due to unspecified organism (disorder),n,via Query Table +789671000000109,Preferred place of care for next exacerbation of chronic obstructive pulmonary disease ,n,via Query Table +540151000000108,Pneumonia or influenza NOS (disorder),n,via Query Table +540141000000105,Other specified pneumonia or influenza (disorder),n,via Query Table +807651000000109,Bronchiolitis obliterans syndrome after lung transplantation,n,via Query Table +468671000000107,[X]Other bacterial pneumonia (disorder),n,via Query Table +400631000000109,"[X]Other pneumonia, organism unspecified (disorder)",n,via Query Table +649141000000105,Mucopurulent chronic bronchitis NOS (disorder),n,via Query Table +781591000000108,Education about chronic obstructive pulmonary disease (procedure),n,via Query Table +568721000000106,Other specified transplantation of heart and lung (procedure),n,via Query Table +390151000000103,[X]Other chronic respiratory diseases originating in the perinatal period (disorder),n,via Query Table +528511000000103,Perinatal interstitial emphysema and related conditions (disorder),n,via Query Table +626071000000107,Pneumoconiosis NOS (disorder),n,via Query Table +276694004,Acquired neonatal pneumonia (disorder),n,via Query Table +658391000000105,Cystic fibrosis with other manifestations (disorder),n,via Query Table +123620007,Hantanvirus pulmonary syndrome (disorder),n,via Query Table +240311002,Pneumonitis due to fetal aspiration (disorder),n,via Query Table +213401000000106,Chronic obstructive pulmonary disease disturbs sleep,n,via Query Table +523661000000105,Step down change in chronic obstructive pulmonary disease management plan (regime/therapy),n,via Query Table +389075004,Tuberculous pneumonia of humans (disorder),n,via Query Table +187042003,Histoplasma capsulatum with pneumonia (disorder),n,via Query Table +213411000000108,Chronic obstructive pulmonary disease disturbs sleep,n,via Query Table +834491000000101,End stage chronic obstructive airways disease,n,via Query Table +111885006,AIDS with pneumonia (disorder),n,via Query Table +412891000000108,[X]Pneumonitis due to inhalation of other solids and liquids (disorder),n,via Query Table +649201000000103,Pulmonary eosinophilia NOS (disorder),n,via Query Table +611551000000109,Asbestosis NOS (disorder),n,via Query Table +491091000000105,Chronic obstructive pulmonary disease patient unsuitable for pulmonary rehabilitation - enhanced services administration ,n,via Query Table +123592004,Acute mucous pneumonia (disorder),n,via Query Table +28168000,"Idiopathic fibrosing alveolitis, chronic form (disorder)",n,via Query Table +707011000000103,Liver disease due to cystic fibrosis,n,via Query Table +74455006,Bovine allergic alveolitis (disorder),n,via Query Table +897321000000107,Shared care chronic obstructive disease monitoring ,n,via Query Table +192671000000106,Bronchiolitis obliterans,n,via Query Table +68759006,"Idiopathic fibrosing alveolitis, subacute form (disorder)",n,via Query Table +196161007,Interstitial lung disease NEC (disorder),n,via Query Table +857671000000106,Seen in chronic obstructive pulmonary disease clinic ,n,via Query Table +412775002,Asthma clinical management plan (qualifier value),n,via Query Table +253151000000106,Health education - chronic obstructive pulmonary disease ,n,via Query Table +689401000000108,Bronchopneumonia due to unspecified organism (disorder),n,via Query Table +515641000000103,Cystic fibrosis annual review ,n,via Query Table +195905006,Pneumonia with histoplasmosis (disorder),n,via Query Table +781651000000101,Respiratory bronchiolitis associated interstitial lung disease (disorder),n,via Query Table +338121000000103,Chronic type 1 respiratory failure,n,via Query Table +325401000000109,Chronic type 2 respiratory failure (disorder),n,via Query Table +286451000000100,Cystic fibrosis related diabetes mellitus (disorder),n,via Query Table +645401000000102,Pneumonitis due to inhalation of oil or essence NOS (disorder),n,via Query Table +707891000000102,Complication of transplanted lung,n,via Query Table +630531000000104,Bronchiectasis NOS (disorder),n,via Query Table +579661000000108,Chronic bullous emphysema NOS (disorder),n,via Query Table +60837001,Contagious bovine pleuropneumonia (disorder),n,via Query Table +195882005,Viral pneumonia NEC (disorder),n,via Query Table +706991000000106,Arthropathy in cystic fibrosis,n,via Query Table +948121000000105,Telehealth chronic obstructive pulmonary disease monitoring ,n,via Query Table +17365008,Allergic pneumonia (disorder),n,via Query Table +255621000000109,Double lung transplant ,n,via Query Table +555141000000100,Other specified transplantation of lung (procedure),n,via Query Table +915671000000101,Chronic obstructive pulmonary disease management plan declined,n,via Query Table +564621000000105,Other specified respiratory tuberculosis NOS (disorder),n,via Query Table +397981000000105,[X]Other respiratory diseases principally affecting the interstitium (disorder),n,via Query Table +478351000000102,[X]Congenital pneumonia due to other organisms (disorder),n,via Query Table +807891000000100,Interstitial lung disease due to connective tissue disease,n,via Query Table +601591000000103,Other chronic bronchitis (disorder),n,via Query Table +586341000000100,Transplantation of heart and lung NOS (procedure),n,via Query Table +781711000000106,Interstitial lung disease due to connective tissue disease (disorder),n,via Query Table +129458007,Bronchiolitis obliterans organizing pneumonia (disorder),n,via Query Table +469801000000105,[X]Pneumonia in parasitic diseases classified elsewhere (disorder),n,via Query Table +294001000000101,Very severe chronic obstructive pulmonary disease ,n,via Query Table +255641000000102,Single lobe lung transplant ,n,via Query Table +113031000000108,Chronic obstructive pulmonary disease monitoring administration (administrative concept),n,via Query Table +89991000000102,Excepted from COPD quality indicators: Patient unsuitable (administrative concept),n,via Query Table +471471000000106,[X]Pneumonia due to other specified infectious organisms (disorder),n,via Query Table +617941000000107,Viral pneumonia NEC (disorder),n,via Query Table +391131001,Chronic obstructive pulmonary disease self-management plan given (regime/therapy),n,via Query Table +187061004,Histoplasmosis with pneumonia (disorder),n,via Query Table +564611000000104,Other specified respiratory tuberculosis (disorder),n,via Query Table +636501000000107,Pneumonitis due to inhalation of food or vomitus NOS (disorder),n,via Query Table +113041000000104,Chronic obstructive pulmonary disease monitoring 1st letter (administrative concept),n,via Query Table +338241000000100,Primary ciliary dyskinesia,n,via Query Table +390971000000109,[X]Other conditions related to interstitial emphysema originating in the perinatal period (disorder),n,via Query Table +790311000000104,Referral to chronic obstructive pulmonary disease community nursing team ,n,via Query Table +375861000000106,Referred for chronic obstructive pulmonary disease structured smoking assessment - enhanced services administration ,n,via Query Table +81638006,Contagious caprine pleuropneumonia (disorder),n,via Query Table +204572006,"Lung agenesis, hypoplasia and dysplasia (disorder)",n,via Query Table +368861000000109,Recurrent pulmonary embolism ,n,via Query Table +442341000000102,[X]Pneumonia in other diseases classified elsewhere (disorder),n,via Query Table +810721000000108,Pneumonia due to Human metapneumovirus (disorder),n,via Query Table +233693005,Pulmonary histiocytosis X (disorder),n,via Query Table +783641000000100,General practitioner out of hours service notified of chronic obstructive disease care plan ,n,via Query Table +375931000000105,Chronic obstructive pulmonary disease structured smoking assessment declined - enhanced services administration ,n,via Query Table +255631000000106,Single lung transplant ,n,via Query Table +826121000000103,On chronic obstructive pulmonary disease supportive care pathway,n,via Query Table +312602005,Lung transplant disorder (disorder),n,via Query Table +857801000000104,Chronic obstructive pulmonary disease rescue pack declined ,n,via Query Table +554081000000108,"Tuberculosis of lung, confirmed by unspecified means (disorder)",n,via Query Table +196009005,Massive silicotic fibrosis (disorder),n,via Query Table +812311000000102,Hantavirus pulmonary syndrome (disorder),n,via Query Table +831811000000105,Pneumonia due to human metapneumovirus,n,via Query Table +292571000000107,Cystic fibrosis related diabetes mellitus,n,via Query Table +652331000000107,Basal pneumonia due to unspecified organism (disorder),n,via Query Table +89087009,Porcine contagious pleuropneumonia (disorder),n,via Query Table +409081000000107,[X]Congenital pneumonia due to other bacterial agents (disorder),n,via Query Table +654461000000102,"Pneumonic plague, unspecified (disorder)",n,via Query Table +409811000000108,[X]Hypersensitivity pneumonitis due to other organic dusts (disorder),n,via Query Table +832111000000108,Chronic obstructive pulmonary disease self-management plan review,n,via Query Table +50648007,Tropical eosinophilia (disorder),n,via Query Table +15341009,Atypical interstitial pneumonia of cattle (disorder),n,via Query Table +807861000000106,Respiratory bronchiolitis associated interstitial lung disease,n,via Query Table +396284006,Lobular pneumonia (disorder),n,via Query Table +760631000000101,Chronic obstructive pulmonary disease 6 month review ,n,via Query Table +57541005,Pulmonary pneumocystosis (disorder),n,via Query Table +550501000000102,Transplantation of lung NOS (procedure),n,via Query Table +413846005,Chronic obstructive pulmonary disease finding (finding),n,via Query Table +451271000000107,[X]Pneumoconiosis due to other specified inorganic dusts (disorder),n,via Query Table +649151000000108,Pulmonary congestion and hypostasis NOS (disorder),n,via Query Table +859051000000100,Exacerbation of cystic fibrosis ,n,via Query Table diff --git a/codelists/opensafely-dementia-snomed.csv b/codelists/opensafely-dementia-snomed.csv new file mode 100644 index 0000000..a5c6aef --- /dev/null +++ b/codelists/opensafely-dementia-snomed.csv @@ -0,0 +1,36 @@ +id,name,active,notes +191464005,Arteriosclerotic dementia with delirium (disorder),y,direct mapping +429998004,Vascular dementia (disorder),y,direct mapping +191463004,Uncomplicated arteriosclerotic dementia (disorder),y,direct mapping +312991009,Senile dementia of the Lewy body type (disorder),y,direct mapping +230287006,Mixed cortical and subcortical vascular dementia (disorder),y,direct mapping +230258005,Amyotrophic lateral sclerosis with dementia (disorder),y,direct mapping +56267009,Multi-infarct dementia (disorder),y,direct mapping +191466007,Arteriosclerotic dementia with depression (disorder),y,direct mapping +230285003,Vascular dementia of acute onset (disorder),y,direct mapping +429458009,Dementia due to Creutzfeldt Jakob disease (disorder),y,direct mapping +191465006,Arteriosclerotic dementia with paranoia (disorder),y,direct mapping +230286002,Subcortical vascular dementia (disorder),y,direct mapping +1089521000000106,Predominantly cortical dementia (disorder),y,direct mapping +80098002,Diffuse Lewy body disease (disorder),y,direct mapping +10349009,Multi-infarct dementia with delirium (disorder),y,descendant of concept mapped from leaf +42769004,Diffuse Lewy body disease with spongiform cortical change (disorder),y,descendant of concept mapped from leaf +135811000119107,Lewy body dementia with behavioral disturbance (disorder),y,descendant of concept mapped from leaf +90099008,Subcortical leukoencephalopathy (disorder),y,descendant of concept mapped from leaf +698948009,Vascular dementia in remission (disorder),y,descendant of concept mapped from leaf +723123001,Ischemic vascular dementia (disorder),y,descendant of concept mapped from leaf +1089531000000108,Predominantly cortical vascular dementia (disorder),y,descendant of concept mapped from leaf +288631000119104,Vascular dementia with behavioral disturbance (disorder),y,descendant of concept mapped from leaf +70936005,"Multi-infarct dementia, uncomplicated (disorder)",y,descendant of concept mapped from leaf +25772007,Multi-infarct dementia with delusions (disorder),y,descendant of concept mapped from leaf +14070001,Multi-infarct dementia with depression (disorder),y,descendant of concept mapped from leaf +16276361000119109,Vascular dementia without behavioral disturbance (disorder),y,descendant of concept mapped from leaf +106021000119105,Multi-infarct dementia due to atherosclerosis (disorder),y,descendant of concept mapped from leaf +198681000000106,[X]Lewy body dementia (disorder),n,via Query Table +1089581000000107,Predominantly cortical dementia (disorder),n,via Query Table +192171006,"[X]Vascular dementia, unspecified (disorder)",n,via Query Table +214031000000108,[X]Lewy body dementia,n,via Query Table +412631000000106,[X]Other vascular dementia (disorder),n,via Query Table +414351000000102,[X]Dementia in Creutzfeldt-Jakob disease (disorder),n,via Query Table +192175002,[X]Dementia in Creutzfeldt-Jakob disease (disorder),n,via Query Table +413281000000101,"[X]Vascular dementia, unspecified (disorder)",n,via Query Table diff --git a/codelists/opensafely-diabetes-snomed.csv b/codelists/opensafely-diabetes-snomed.csv new file mode 100644 index 0000000..87b112f --- /dev/null +++ b/codelists/opensafely-diabetes-snomed.csv @@ -0,0 +1,1231 @@ +id,name,active,notes +314010006,Diffuse exudative maculopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +232021008,Proliferative diabetic retinopathy with new vessels on disc (disorder),y,direct mapping +428274007,Dietary education for type II diabetes mellitus (procedure),y,direct mapping +426705001,Diabetes mellitus co-occurrent and due to cystic fibrosis (disorder),y,direct mapping +1065461000000102,Type 2 diabetes mellitus risk assessment invitation first letter (procedure),y,direct mapping +190372001,Type I diabetes mellitus maturity onset (disorder),y,direct mapping +857921000000103,Provision of written information about diabetes and driving (procedure),y,direct mapping +48951005,Bullosis diabeticorum (disorder),y,direct mapping +170778005,Annual diabetic blood test (regime/therapy),y,direct mapping +1065471000000109,Type 2 diabetes mellitus risk assessment invitation second letter (procedure),y,direct mapping +198501000000100,Diabetic 6 month review (regime/therapy),y,direct mapping +1065481000000106,Type 2 diabetes mellitus risk assessment invitation third letter (procedure),y,direct mapping +394681008,On examination - Left diabetic foot at moderate risk (finding),y,direct mapping +367011000000100,Diabetic foot screen (regime/therapy),y,direct mapping +417467000,Discharged from care of diabetes specialist nurse (finding),y,direct mapping +923361000000106,Diabetic foot care education (procedure),y,direct mapping +421986006,Persistent proteinuria associated with type II diabetes mellitus (disorder),y,direct mapping +306531000000104,Expert patient education versus routine treatment diabetes structured education programme completed (situation),y,direct mapping +73211009,Diabetes mellitus (disorder),y,direct mapping +719566006,Diabetic on non-insulin injectable medication (finding),y,direct mapping +308755006,Subcutaneous injection of insulin (procedure),y,direct mapping +201961000000104,Referral to diabetic register (procedure),y,direct mapping +422088007,Disorder of nervous system co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +415270003,Referral to diabetes structured education program (procedure),y,direct mapping +894741000000107,Hypoglycaemic warning absent (disorder),y,direct mapping +473209001,Diabetic erectile dysfunction review (regime/therapy),y,direct mapping +422014003,Disorder due to type 2 diabetes mellitus (disorder),y,direct mapping +170761001,Diabetic treatment changed (situation),y,direct mapping +46635009,Diabetes mellitus type 1 (disorder),y,direct mapping +170760000,Diabetic drug side effects (finding),y,direct mapping +398140007,Somogyi phenomenon (disorder),y,direct mapping +860981000000106,Referral to dose adjustment for normal eating diabetes structured education programme declined (situation),y,direct mapping +193350004,Advanced maculopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +407672007,Seen in diabetic foot clinic (finding),y,direct mapping +983451000000106,Diabetic carbohydrate counting diet (finding),y,direct mapping +700449008,Non-diabetic hyperglycemia (disorder),y,direct mapping +182780004,Diabetic crisis monitoring (regime/therapy),y,direct mapping +944141000000108,Diabetic peripheral neuropathic pain (finding),y,direct mapping +421893009,Renal disorder associated with type I diabetes mellitus (disorder),y,direct mapping +394673007,On examination - Right diabetic foot - ulcerated (finding),y,direct mapping +182781000,Diabetic stabilization (regime/therapy),y,direct mapping +232020009,Disorder of macula co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +838731000000104,Referral to community diabetes specialist nurse declined (situation),y,direct mapping +185758007,Diabetes monitoring third letter (procedure),y,direct mapping +193141005,Mononeuritis multiplex co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +237599002,Insulin treated type 2 diabetes mellitus (disorder),y,direct mapping +408409007,On examination - right eye background diabetic retinopathy (disorder),y,direct mapping +198481000000109,Insulin needles changed for each injection (finding),y,direct mapping +887861000000105,Diabetes Year of Care annual review (regime/therapy),y,direct mapping +312904009,Moderate nonproliferative retinopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +787061000000100,Diabetes care plan declined (situation),y,direct mapping +26298008,Diabetic coma with ketoacidosis (disorder),y,direct mapping +313340009,Seen in diabetic eye clinic (finding),y,direct mapping +334711000000100,Referral to diabetes special interest general practitioner (procedure),y,direct mapping +781161000000107,Referral to diabetes education and self management for ongoing and newly diagnosed structured programme declined (situation),y,direct mapping +1065511000000100,Type 2 diabetes mellitus risk assessment invitation short message service text message (procedure),y,direct mapping +195302000,Gangrene of toe (disorder),y,direct mapping +230579006,Thoracic radiculopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +713705003,Polyneuropathy co-occurrent and due to type 1 diabetes mellitus (disorder),y,direct mapping +441922002,Does rotate site of insulin injection (finding),y,direct mapping +870681000000109,In-house diabetic foot screening (procedure),y,direct mapping +199481000000100,Diabetic monitoring - lower risk albumin excretion (finding),y,direct mapping +315207000,Diabetic lipid lowering diet (finding),y,direct mapping +374661000000106,Excluded from diabetic retinopathy screening as under care of ophthalmologist (finding),y,direct mapping +190411003,Malnutrition-related diabetes mellitus with multiple complications (disorder),y,direct mapping +312908007,Proliferative diabetic retinopathy - quiescent (disorder),y,direct mapping +165681007,Hemoglobin A1c greater than 10% indicating poor diabetic control (finding),y,direct mapping +170753006,Understands diet - diabetes (finding),y,direct mapping +312907002,Proliferative diabetic retinopathy - high risk (disorder),y,direct mapping +201723002,Diabetic hand syndrome (disorder),y,direct mapping +238983004,Diabetic thick skin syndrome (disorder),y,direct mapping +237622006,Poor glycemic control (disorder),y,direct mapping +238894004,Insulin lipohypertrophy (disorder),y,direct mapping +237627000,Pregnancy and type 2 diabetes mellitus (disorder),y,direct mapping +374811000000108,Excluded from diabetic retinopathy screening as terminal illness (finding),y,direct mapping +385051000000106,Pre-existing diabetes mellitus (disorder),y,direct mapping +170745003,Diabetic on diet only (finding),y,direct mapping +867891000000101,Erectile dysfunction due to diabetes mellitus (disorder),y,direct mapping +775841000000109,Diabetic retinopathy detected by national screening programme (disorder),y,direct mapping +190389009,Type II diabetes mellitus with ulcer (disorder),y,direct mapping +183781007,Listed for Diabetology admission (finding),y,direct mapping +717421000000100,Excepted from diabetes quality indicators - patient unsuitable (finding),y,direct mapping +414906009,On examination - right chronic diabetic foot ulcer (finding),y,direct mapping +769244003,Disorder of right macula co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +59276001,Proliferative retinopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +1066931000000108,Diabetes monitoring short message service text message third invitation (procedure),y,direct mapping +190331003,Type 2 diabetes mellitus with hyperosmolar coma (disorder),y,direct mapping +421895002,Peripheral vascular disorder co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +373031000000105,Diabetic retinopathy screening administrative status (finding),y,direct mapping +303059007,Postpancreatectomy hypoinsulinemia (disorder),y,direct mapping +408413000,On examination - right eye proliferative diabetic retinopathy (disorder),y,direct mapping +374631000000101,Excluded from diabetic retinopathy screening as deceased (finding),y,direct mapping +420715001,Persistent microalbuminuria associated with type II diabetes mellitus (disorder),y,direct mapping +755491000000100,Diabetes structured education programme completed (situation),y,direct mapping +198321000000100,Insulin therapy declined (situation),y,direct mapping +193184006,Chronic painful diabetic neuropathy (disorder),y,direct mapping +230577008,Mononeuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +280137006,Diabetic foot (disorder),y,direct mapping +371871000000101,Eligibility permanently inactive for diabetic retinopathy screening (finding),y,direct mapping +420486006,Exudative maculopathy co-occurrent and due to type 1 diabetes mellitus (disorder),y,direct mapping +444073006,Type I diabetes mellitus uncontrolled (finding),y,direct mapping +314904008,Type II diabetes mellitus with neuropathic arthropathy (disorder),y,direct mapping +420270002,Ketoacidosis in type I diabetes mellitus (disorder),y,direct mapping +170769004,Diabetic - cooperative patient (finding),y,direct mapping +811981000000102,Diabetes self-management plan agreed (finding),y,direct mapping +374901000000103,Excluded from diabetic retinopathy screening (finding),y,direct mapping +25093002,Disorder of eye co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +344061000000104,Referral to children's diabetes nurse specialist (procedure),y,direct mapping +878011000000108,Insulin passport not checked (situation),y,direct mapping +394684000,Diabetic pre-pregnancy education (procedure),y,direct mapping +314771006,Type I diabetes mellitus with hypoglycemic coma (disorder),y,direct mapping +308106006,On examination - Left diabetic foot at risk (disorder),y,direct mapping +11530004,Brittle diabetes mellitus (finding),y,direct mapping +472969004,History of diabetes mellitus type 2 (situation),y,direct mapping +306471000000103,Dose adjustment for normal eating diabetes structured education programme completed (situation),y,direct mapping +273413007,Diabetes wellbeing questionnaire (assessment scale),y,direct mapping +193183000,Acute painful diabetic neuropathy (disorder),y,direct mapping +198471000000107,Insulin needles changed daily (finding),y,direct mapping +311366001,Kimmelstiel-Wilson syndrome (disorder),y,direct mapping +809391000000101,Referral to diabetes clinic (procedure),y,direct mapping +494961000000102,Discharged from diabetes shared care programme (finding),y,direct mapping +197605007,Nephrotic syndrome due to diabetes mellitus (disorder),y,direct mapping +394683006,Diabetic foot risk assessment (procedure),y,direct mapping +773001000000103,Symptomatic diabetic peripheral neuropathy (disorder),y,direct mapping +185754009,Refuses diabetes monitoring (situation),y,direct mapping +237616002,"Hypogonadism, diabetes mellitus, alopecia, mental retardation and electrocardiographic abnormalities (disorder)",y,direct mapping +127014009,Diabetic peripheral angiopathy (disorder),y,direct mapping +395049009,Diabetic monitoring not required (finding),y,direct mapping +390890005,Refer to diabetic foot screener (procedure),y,direct mapping +237621004,Diabetic severe hyperglycemia (disorder),y,direct mapping +754141000000100,Diabetic dietary review declined (situation),y,direct mapping +1065501000000102,Type 2 diabetes mellitus risk assessment telephone invitation (procedure),y,direct mapping +185756006,Diabetes monitoring first letter (procedure),y,direct mapping +198831000000108,Referral to multidisciplinary diabetic clinic (procedure),y,direct mapping +312912001,Macular edema co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +185760009,Diabetes monitoring telephone invite (procedure),y,direct mapping +204061000000100,Diabetic - adequate control (finding),y,direct mapping +769245002,Disorder of left macula co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +1067201000000106,Eating disorder co-occurrent with diabetes mellitus type 1 (disorder),y,direct mapping +870741000000109,In-house diabetic foot screening follow-up appointment (procedure),y,direct mapping +756381000000100,On examination - Left diabetic foot at increased risk (finding),y,direct mapping +909441000000109,Diabetes Distress Scale 17 item (assessment scale),y,direct mapping +183722003,Diabetology domiciliary visit requested (finding),y,direct mapping +374871000000103,Excluded from diabetic retinopathy screening as physical disorder (finding),y,direct mapping +74627003,Diabetic complication (disorder),y,direct mapping +365845005,Hemoglobin A1C - diabetic control finding (finding),y,direct mapping +374601000000107,Excluded from diabetic retinopathy screening as moved away (finding),y,direct mapping +236499007,Microalbuminuric diabetic nephropathy (disorder),y,direct mapping +199301000000100,Did not attend diabetic retinopathy clinic (finding),y,direct mapping +306701000000102,Referral to dose adjustment for normal eating diabetes structured education programme (procedure),y,direct mapping +876381000000100,Conversion to insulin by diabetes specialist nurse (regime/therapy),y,direct mapping +306861000000107,Did not attend diabetes structured education programme (finding),y,direct mapping +429094000,Dietary education for type I diabetes mellitus (procedure),y,direct mapping +190368000,Type I diabetes mellitus with ulcer (disorder),y,direct mapping +190330002,Type 1 diabetes mellitus with hyperosmolar coma (disorder),y,direct mapping +408394009,Under care of diabetic foot screener (finding),y,direct mapping +810961000000103,Diabetes self-management plan review (procedure),y,direct mapping +238982009,Diabetic dermopathy (disorder),y,direct mapping +918891000000108,Conversion to non-insulin injectable medication (situation),y,direct mapping +24481000000101,Type 2 diabetes on diet only (finding),y,direct mapping +735985000,Diabetes self management plan (record artifact),y,direct mapping +754101000000103,Type I diabetic dietary review (regime/therapy),y,direct mapping +310425007,Diabetes monitoring invitation (procedure),y,direct mapping +420422005,Ketoacidosis in diabetes mellitus (disorder),y,direct mapping +344641000000106,Insulin initiation - enhanced services administration (procedure),y,direct mapping +703040004,Agreeing on diabetes care plan (procedure),y,direct mapping +421847006,Ketoacidotic coma in type II diabetes mellitus (disorder),y,direct mapping +43959009,Cataract co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +310505005,Diabetic hyperosmolar non-ketotic state (disorder),y,direct mapping +398985007,Diabetic monitoring - injection sites normal (finding),y,direct mapping +193349004,Preproliferative retinopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +237619009,Diabetes-deafness syndrome maternally transmitted (disorder),y,direct mapping +170772006,Date diabetic treatment start (regime/therapy),y,direct mapping +414890007,On examination - left chronic diabetic foot ulcer (finding),y,direct mapping +170777000,Diabetic annual review (regime/therapy),y,direct mapping +394676004,On examination - Left diabetic foot at high risk (finding),y,direct mapping +195303005,Gangrene of foot (disorder),y,direct mapping +111552007,Diabetes mellitus without complication (disorder),y,direct mapping +308505000,Diabetes monitoring call (procedure),y,direct mapping +268519009,Diabetic - poor control (finding),y,direct mapping +307021000000105,Did not complete expert patient education versus routine treatment diabetes structured education programme (situation),y,direct mapping +885931000000100,Diabetes structured education programme not available (situation),y,direct mapping +1065491000000108,Type 2 diabetes mellitus risk assessment verbal invitation (procedure),y,direct mapping +412752009,Diabetic foot examination declined (situation),y,direct mapping +314903002,Type II diabetes mellitus with arthropathy (disorder),y,direct mapping +829521000000104,Provision of diabetes clinical summary (procedure),y,direct mapping +395204000,Hyperosmolar non-ketotic state in type 2 diabetes mellitus (disorder),y,direct mapping +421750000,Ketoacidosis in type II diabetes mellitus (disorder),y,direct mapping +609561005,Maturity-onset diabetes of the young (disorder),y,direct mapping +170746002,Diabetic on oral treatment (finding),y,direct mapping +408405001,Patient held diabetic record issued (record artifact),y,direct mapping +314011005,Focal exudative maculopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +25351000000101,Diabetic diet - good compliance (finding),y,direct mapping +75682002,Diabetes mellitus caused by insulin receptor antibodies (disorder),y,direct mapping +314014002,Ischemic maculopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +390834004,Nonproliferative retinopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +408412005,On examination - left eye preproliferative diabetic retinopathy (disorder),y,direct mapping +739681000,Disorder of eye co-occurrent and due to type 1 diabetes mellitus (disorder),y,direct mapping +420789003,Retinopathy co-occurrent and due to type 1 diabetes mellitus (disorder),y,direct mapping +306591000000103,Diabetes structured education programme declined (situation),y,direct mapping +313436004,Type II diabetes mellitus without complication (disorder),y,direct mapping +25361000000103,Diabetic diet - poor compliance (finding),y,direct mapping +862481000000103,Diabetic foot screening invitation third letter (procedure),y,direct mapping +420279001,Renal disorder due to type 2 diabetes mellitus (disorder),y,direct mapping +268517006,Diabetic monitoring - injection sites (finding),y,direct mapping +312856000,Referral to diabetes nurse (procedure),y,direct mapping +306401000000106,Attended expert patient education versus routine treatment diabetes structured education programme (finding),y,direct mapping +700414001,Education about diabetes and driving (procedure),y,direct mapping +232023006,Traction retinal detachment co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +413597006,Attended diabetes structured education program (finding),y,direct mapping +345041000000101,Insulin treatment initiated (finding),y,direct mapping +170748001,Last hypoglycemia attack (finding),y,direct mapping +390854003,On examination - diabetic maculopathy present both eyes (situation),y,direct mapping +819301000000105,Diabetes monitoring injection site check declined (situation),y,direct mapping +237623001,Acute hyperglycemia (disorder),y,direct mapping +306741000000104,Referral to diabetes education and self management for ongoing and newly diagnosed diabetes structured programme (procedure),y,direct mapping +394682001,On examination - Right diabetic foot at moderate risk (finding),y,direct mapping +407569005,Patient on maximal tolerated therapy for diabetes (finding),y,direct mapping +267604001,Myasthenic syndrome due to diabetic amyotrophy (disorder),y,direct mapping +408396006,Diabetic retinopathy screening not indicated (situation),y,direct mapping +609562003,"Maturity onset diabetes of the young, type 1 (disorder)",y,direct mapping +399871005,Visually threatening diabetic retinopathy (disorder),y,direct mapping +472972006,History of maturity onset diabetes mellitus in young (situation),y,direct mapping +230576004,Asymmetric polyneuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +232022001,Proliferative diabetic retinopathy with new vessels elsewhere than on disc (disorder),y,direct mapping +415744000,Transition of diabetes care options discussed (situation),y,direct mapping +394672002,On examination - Right diabetic foot at high risk (finding),y,direct mapping +420756003,Cataract co-occurrent and due to diabetes mellitus type 2 (disorder),y,direct mapping +306501000000105,Diabetes education and self management for ongoing and newly diagnosed structured programme completed (situation),y,direct mapping +527691000000107,Diabetic on subcutaneous treatment (finding),y,direct mapping +420868002,Disorder due to type 1 diabetes mellitus (disorder),y,direct mapping +183751004,Diabetology domiciliary visit done (finding),y,direct mapping +408384004,Diabetic retinopathy 12 month review (finding),y,direct mapping +165680008,Hemoglobin A1c between 7%-10% indicating borderline diabetic control (finding),y,direct mapping +421920002,Cataract co-occurrent and due to diabetes mellitus type 1 (disorder),y,direct mapping +267384006,Hypoglycemic coma (disorder),y,direct mapping +401191002,Diabetic foot examination (regime/therapy),y,direct mapping +307171000000108,Did not attend diabetes education and self management for ongoing and newly diagnosed structured programme (finding),y,direct mapping +512561000000108,Unsuitable for diabetes year of care programme (finding),y,direct mapping +170765005,Chronic hyperglycemia (disorder),y,direct mapping +1024571000000100,Under care of community-based diabetes specialist nurse (finding),y,direct mapping +783901000000107,No evidence of diabetic nephropathy (situation),y,direct mapping +408414006,On examination - left eye proliferative diabetic retinopathy (disorder),y,direct mapping +763782001,Provision of patient held diabetes record refused (situation),y,direct mapping +422166005,Peripheral circulatory disorder associated with type II diabetes mellitus (disorder),y,direct mapping +335621000000101,Maternally inherited diabetes mellitus (disorder),y,direct mapping +185759004,Diabetes monitoring verbal invite (procedure),y,direct mapping +5969009,Diabetes mellitus associated with genetic syndrome (disorder),y,direct mapping +24451000000107,Diabetes: shared care in pregnancy - diabetologist and obstetrician (finding),y,direct mapping +180178009,Continuous subcutaneous infusion of insulin (procedure),y,direct mapping +422126006,Hyperosmolar coma associated with diabetes mellitus (disorder),y,direct mapping +408391001,Under care of diabetologist (finding),y,direct mapping +185761008,Diabetes monitoring deleted (finding),y,direct mapping +851991000000108,Diabetes quality of life questionnaire score (observable entity),y,direct mapping +230574001,Acute painful polyneuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +756391000000103,On examination - Right diabetic foot at increased risk (finding),y,direct mapping +126534007,Mixed sensorimotor polyneuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +609572000,"Maturity-onset diabetes of the young, type 5 (disorder)",y,direct mapping +170770003,Diabetic-uncooperative patient (finding),y,direct mapping +720504004,Not suitable for Diabetes Education and Self Management for Ongoing and Newly Diagnosed program (finding),y,direct mapping +422099009,Disorder of eye co-occurrent and due to type 2 diabetes mellitus (disorder),y,direct mapping +414910007,On examination - right eye stable treated proliferative diabetic retinopathy (disorder),y,direct mapping +190388001,Type II diabetes mellitus with multiple complications (disorder),y,direct mapping +421631007,Gangrene associated with type II diabetes mellitus (disorder),y,direct mapping +33559001,Pineal hyperplasia AND diabetes mellitus syndrome (disorder),y,direct mapping +309593006,Education score - diabetes (assessment scale),y,direct mapping +977201000000107,Recommendation to self-refer for diabetes structured education (procedure),y,direct mapping +421075007,Ketoacidotic coma in type I diabetes mellitus (disorder),y,direct mapping +956781000000107,Joint consultation with practice nurse and community diabetes specialist nurse (procedure),y,direct mapping +754461000000105,Referral to type I diabetes structured education programme (procedure),y,direct mapping +422034002,Retinopathy co-occurrent and due to type 2 diabetes mellitus (disorder),y,direct mapping +719570003,Provision of diabetes identity card (procedure),y,direct mapping +876361000000109,Conversion to insulin in secondary care (regime/therapy),y,direct mapping +754121000000107,Type II diabetic dietary review (regime/therapy),y,direct mapping +236500003,Proteinuric diabetic nephropathy (disorder),y,direct mapping +134395001,Diabetic retinopathy screening (procedure),y,direct mapping +31211000119101,Peripheral angiopathy due to type 1 diabetes mellitus (disorder),y,direct mapping +361216007,Femoral mononeuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +861531000000107,Diabetic foot screening invitation first letter (procedure),y,direct mapping +306991000000107,Did not complete diabetes education and self management for ongoing and newly diagnosed structured programme (situation),y,direct mapping +170771004,Diabetic - follow-up default (finding),y,direct mapping +238984005,Diabetic rubeosis (disorder),y,direct mapping +1066921000000106,Diabetes monitoring short message service text message second invitation (procedure),y,direct mapping +311782002,Advanced retinal disease co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +312888008,Attending diabetes clinic (finding),y,direct mapping +306771000000105,Referral to expert patient education versus routine treatment diabetes structured education programme (procedure),y,direct mapping +371811000000106,Ineligible for diabetic retinopathy screening (finding),y,direct mapping +394671009,On examination - Right diabetic foot at low risk (finding),y,direct mapping +754081000000109,Diabetic dietary review (regime/therapy),y,direct mapping +24471000000103,Type 2 diabetes on insulin (finding),y,direct mapping +237617006,"Megaloblastic anemia, thiamine-responsive, with diabetes mellitus and sensorineural deafness (disorder)",y,direct mapping +374721000000109,Excluded from diabetic retinopathy screening as no longer diabetic (finding),y,direct mapping +713703005,Gastroparesis co-occurrent and due to type 2 diabetes mellitus (disorder),y,direct mapping +716911000000104,Exception reporting - diabetes quality indicators (finding),y,direct mapping +429729007,Diabetic education completed (situation),y,direct mapping +39058009,Lumbosacral radiculoplexus neuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +308105005,On examination - Right diabetic foot at risk (disorder),y,direct mapping +719216001,Hypoglycemic coma co-occurrent and due to diabetes mellitus type II (disorder),y,direct mapping +279291000000109,Diabetes type 1 review (regime/therapy),y,direct mapping +237620003,Abnormal metabolic state in diabetes mellitus (disorder),y,direct mapping +248161000000101,Referral for diabetic retinopathy screening (procedure),y,direct mapping +270445003,Diabetes monitoring check done (finding),y,direct mapping +304752002,Perceived control of insulin-dependent diabetes (assessment scale),y,direct mapping +976361000000100,Diabetic on insulin and glucagon-like peptide 1 receptor agonist (finding),y,direct mapping +165679005,Hemoglobin A1c less than 7% indicating good diabetic control (finding),y,direct mapping +861551000000100,Diabetic foot screening invitation second letter (procedure),y,direct mapping +170775008,Diabetes: shared care program (finding),y,direct mapping +170752001,Has seen dietitian - diabetes (finding),y,direct mapping +202151000000105,Patient consent given for addition to diabetic register (finding),y,direct mapping +422275004,Gangrene associated with diabetes mellitus (disorder),y,direct mapping +398871001,Diabetic monitoring - injection sites abnormal (finding),y,direct mapping +762811000000109,Did not attend diabetes foot screening (finding),y,direct mapping +373041000000101,Impaired vision due to diabetic retinopathy (finding),y,direct mapping +408411003,On examination - right eye preproliferative diabetic retinopathy (disorder),y,direct mapping +279321000000104,Diabetes type 2 review (regime/therapy),y,direct mapping +413180006,Pan retinal photocoagulation for diabetes (procedure),y,direct mapping +170774007,Diabetes: practice program (finding),y,direct mapping +50620007,Autonomic neuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +811391000000104,Referral to community diabetes service (procedure),y,direct mapping +1033281000000100,Expert patient education versus routine treatment First Steps diabetes self-management programme completed (situation),y,direct mapping +312909004,Proliferative diabetic retinopathy - iris neovascularization (disorder),y,direct mapping +315287002,Diabetes mellitus insulin-glucose infusion in acute myocardial infarction (procedure),y,direct mapping +841221000000102,Referral to community diabetes clinic (procedure),y,direct mapping +720724003,Has diabetes identity card (finding),y,direct mapping +713702000,Gastroparesis co-occurrent and due to type 1 diabetes mellitus (disorder),y,direct mapping +713706002,Polyneuropathy co-occurrent and due to type 2 diabetes mellitus (disorder),y,direct mapping +199291000000104,Insulin needles changed less than once a day (finding),y,direct mapping +1103701000000102,Diabetic retinopathy screening offered (situation),y,direct mapping +698610002,Education about self management of diabetes (procedure),y,direct mapping +417681008,Diabetic patient unsuitable for digital retinal photography (finding),y,direct mapping +193489006,Iritis co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +1065451000000100,Type 2 diabetes mellitus risk assessment invitation (procedure),y,direct mapping +312906006,Proliferative diabetic retinopathy - non high risk (disorder),y,direct mapping +473208009,Assessment of diabetic erectile dysfunction (procedure),y,direct mapping +230572002,Neuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +422183001,Skin ulcer associated with diabetes mellitus (disorder),y,direct mapping +736284000,Diabetes clinical management plan (record artifact),y,direct mapping +307141000000102,Did not attend dose adjustment for normal eating diabetes structured education programme (finding),y,direct mapping +279521000000108,Referral to community diabetes specialist nurse (procedure),y,direct mapping +705072004,Diabetes monitoring invitation by short message service text messaging (procedure),y,direct mapping +703972004,Insulin dose changed (situation),y,direct mapping +314015001,Mixed maculopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +166928007,Glucose tolerance test indicates diabetes mellitus (finding),y,direct mapping +713671000000109,Diabetes monitoring administration (record artifact),y,direct mapping +385793003,Insulin administration education (procedure),y,direct mapping +273412002,Diabetes treatment satisfaction questionnaire (assessment scale),y,direct mapping +750721000000102,Excepted from diabetes quality indicators: service unavailable (finding),y,direct mapping +201724008,Diabetic neuropathic arthropathy (disorder),y,direct mapping +306961000000101,Did not complete dose adjustment for normal eating diabetes structured education programme (situation),y,direct mapping +374691000000100,Excluded from diabetic retinopathy screening as blind (finding),y,direct mapping +417677008,On examination - sight threatening diabetic retinopathy (disorder),y,direct mapping +385041000000108,Diabetes mellitus with multiple complications (disorder),y,direct mapping +44054006,Diabetes mellitus type 2 (disorder),y,direct mapping +198121000000103,Hypoglycaemic warning impaired (disorder),y,direct mapping +127013003,Disorder of kidney co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +269823000,Hemoglobin A1C - diabetic control interpretation (observable entity),y,direct mapping +420662003,Coma associated with diabetes mellitus (disorder),y,direct mapping +408385003,Diabetic retinopathy 6 month review (finding),y,direct mapping +312903003,Mild nonproliferative retinopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +401082004,Hypoglycemic attack requiring third party assistance (finding),y,direct mapping +1066911000000100,Diabetes monitoring short message service text message first invitation (procedure),y,direct mapping +183506001,Non-urgent diabetic admission (procedure),y,direct mapping +819331000000104,Diabetes monitoring injection site not checked (situation),y,direct mapping +1046191000000101,Hypoglycaemic attack - attendance by ambulance crew (finding),y,direct mapping +394725008,Diabetes medication review (procedure),y,direct mapping +421779007,Exudative maculopathy co-occurrent and due to type 2 diabetes mellitus (disorder),y,direct mapping +199491000000103,Diabetic monitoring - higher risk albumin excretion (finding),y,direct mapping +374841000000109,Excluded from diabetic retinopathy screening as learning disability (finding),y,direct mapping +306441000000109,Attended dose adjustment for normal eating diabetes structured education programme (finding),y,direct mapping +49817004,Neonatal diabetes mellitus (disorder),y,direct mapping +841621000000104,Date insulin pump therapy started (observable entity),y,direct mapping +237632004,Hypoglycemic event in diabetes (disorder),y,direct mapping +968061000000105,Diabetic injection administration education (procedure),y,direct mapping +420436000,Mononeuropathy co-occurrent and due to type 2 diabetes mellitus (disorder),y,direct mapping +371781000000108,Eligible for diabetic retinopathy screening (finding),y,direct mapping +170762008,Conversion to insulin (regime/therapy),y,direct mapping +312910009,Vitreous hemorrhage co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +472970003,History of diabetes mellitus type 1 (situation),y,direct mapping +1083111000000108,Diabetes monitoring invitation email (procedure),y,direct mapping +111556005,Diabetic ketoacidosis without coma (disorder),y,direct mapping +309426007,Diabetic glomerulopathy (disorder),y,direct mapping +243860001,Diabetic monitoring status (finding),y,direct mapping +422228004,Multiple complications of type I diabetes mellitus (disorder),y,direct mapping +185753003,Attends diabetes monitoring (finding),y,direct mapping +408539000,Insulin autoimmune syndrome (disorder),y,direct mapping +198131000000101,Hypoglycaemic warning good (disorder),y,direct mapping +870701000000106,In-house diabetic foot screening first appointment (procedure),y,direct mapping +185755005,Diabetes monitoring default (finding),y,direct mapping +413122001,Diabetic retinopathy screening refused (situation),y,direct mapping +420918009,Mononeuropathy co-occurrent and due to type 1 diabetes mellitus (disorder),y,direct mapping +401081006,Diabetic peripheral neuropathy screening (regime/therapy),y,direct mapping +237604008,"Maturity onset diabetes of the young, type 2 (disorder)",y,direct mapping +414894003,On examination - left eye stable treated proliferative diabetic retinopathy (disorder),y,direct mapping +408410002,On examination - left eye background diabetic retinopathy (disorder),y,direct mapping +314194001,Diabetic on insulin and oral treatment (finding),y,direct mapping +408392008,Under care of diabetes specialist nurse (finding),y,direct mapping +247771000000108,Diabetic digital retinopathy screening offered (finding),y,direct mapping +314902007,Type 2 diabetes mellitus with peripheral angiopathy (disorder),y,direct mapping +161649006,History of insulin therapy (situation),y,direct mapping +313435000,Type I diabetes mellitus without complication (disorder),y,direct mapping +853671000000101,Does monitor blood glucose level before driving (finding),y,direct mapping +420514000,Persistent proteinuria associated with type I diabetes mellitus (disorder),y,direct mapping +314893005,Type I diabetes mellitus with arthropathy (disorder),y,direct mapping +202461000000102,Referral to diabetic eye clinic (procedure),y,direct mapping +713691000000108,Diabetes clinic administration (record artifact),y,direct mapping +237633009,Hypoglycemic state in diabetes (disorder),y,direct mapping +238981002,Disorder of soft tissue co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +851501000000106,Diabetes clinical pathway (regime/therapy),y,direct mapping +201250006,Ischemic ulcer diabetic foot (disorder),y,direct mapping +927821000000100,Discharge from secondary care diabetes service (procedure),y,direct mapping +237635002,Nocturnal hypoglycemia (disorder),y,direct mapping +170747006,Diabetic on insulin (finding),y,direct mapping +284350006,Diabetes mellitus diet education (procedure),y,direct mapping +308458007,Referral to diabetic liaison nurse (procedure),y,direct mapping +71771000119100,Diabetic neuropathic arthropathy due to type 1 diabetes mellitus (disorder),y,direct mapping +315051004,Diabetes resolved (finding),y,direct mapping +421326000,Neurological disorder co-occurrent and due to type 2 diabetes mellitus (disorder),y,direct mapping +401110002,Type 1 diabetes mellitus with persistent microalbuminuria (disorder),y,direct mapping +839811000000106,Diabetic retinopathy screening declined (situation),y,direct mapping +421468001,Neurological disorder co-occurrent and due to type 1 diabetes mellitus (disorder),y,direct mapping +4855003,Retinopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +408397002,Diabetic foot examination not indicated (situation),y,direct mapping +170766006,Loss of hypoglycemic warning (disorder),y,direct mapping +201251005,Neuropathic diabetic ulcer - foot (disorder),y,direct mapping +230575000,Chronic painful polyneuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +312905005,Severe nonproliferative retinopathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +374781000000105,Excluded from diabetic retinopathy screening as no current contact details (finding),y,direct mapping +201252003,Mixed diabetic ulcer - foot (disorder),y,direct mapping +170763003,Diabetic - good control (finding),y,direct mapping +1024551000000109,Under care of hospital-based diabetes specialist nurse (finding),y,direct mapping +443694000,Type II diabetes mellitus uncontrolled (finding),y,direct mapping +309635005,History of admission in last year for diabetes foot problem (situation),y,direct mapping +394675000,On examination - Left diabetic foot at low risk (finding),y,direct mapping +49455004,Polyneuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +306931000000106,Did not complete diabetes structured education programme (situation),y,direct mapping +426875007,Latent autoimmune diabetes mellitus in adult (disorder),y,direct mapping +766431000000100,Incretin mimetic dose changed (situation),y,direct mapping +315208005,Diabetic weight reducing diet (finding),y,direct mapping +170742000,Diabetic monitoring (regime/therapy),y,direct mapping +185757002,Diabetes monitoring second letter (procedure),y,direct mapping +394674001,On examination - Left diabetic foot - ulcerated (finding),y,direct mapping +976341000000101,Diabetic on oral treatment and glucagon-like peptide 1 receptor agonist (finding),y,direct mapping +290002008,Brittle type I diabetes mellitus (finding),y,direct mapping +183472000,Diabetic emergency hospital admission (procedure),y,direct mapping +111558006,Insulin coma (disorder),y,direct mapping +193185007,Asymptomatic neuropathy co-occurrent and due to diabetes mellitus (disorder),y,direct mapping +160670007,Diabetic diet (finding),y,direct mapping +307201000000109,Did not attend expert patient education versus routine treatment diabetes structured education programme (finding),y,direct mapping +371841000000107,Eligibility temporarily inactive for diabetic retinopathy screening (finding),y,direct mapping +716031000000106,Excepted from diabetes quality indicators - informed dissent (finding),y,direct mapping +200687002,Cellulitis in diabetic foot (disorder),y,direct mapping +276651000000107,Attended diabetes education and self management for ongoing and newly diagnosed structured programme (finding),y,direct mapping +928851000000109,Enquiry about diabetic erectile dysfunction declined (situation),y,direct mapping +861491000000107,Diabetic foot screening invitation (procedure),y,direct mapping +87481000119109,Heel AND/OR midfoot ulcer due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +72021000119109,Diabetic dermopathy due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +724067006,Permanent neonatal diabetes mellitus with cerebellar agenesis syndrome (disorder),y,descendant of concept mapped from leaf +399863006,Very severe nonproliferative retinopathy without macular edema co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +713704004,Gastroparesis co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +530558861000132104,Atypical diabetes mellitus (disorder),y,descendant of concept mapped from leaf +427089005,Diabetes mellitus due to cystic fibrosis (disorder),y,descendant of concept mapped from leaf +368581000119106,Neuropathy due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +90721000119101,Chronic kidney disease stage 1 due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +771000119108,Chronic kidney disease due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +733072002,"Alaninuria, microcephaly, dwarfism, enamel hypoplasia, diabetes mellitus syndrome (disorder)",y,descendant of concept mapped from leaf +110141000119100,Ulcer of lower limb due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +770323005,Retinal edema co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +104941000119109,Retinal ischemia co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +421437000,Hypoglycemic coma in type I diabetes mellitus (disorder),y,descendant of concept mapped from leaf +421256007,Ophthalmic complication of malnutrition-related diabetes mellitus (disorder),y,descendant of concept mapped from leaf +90751000119109,Chronic kidney disease stage 4 due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +770095003,Cranial nerve palsy co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +445260006,Posttransplant diabetes mellitus (disorder),y,descendant of concept mapped from leaf +1102351000000105,Ketosis-prone diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609567009,Pre-existing type 2 diabetes mellitus in pregnancy (disorder),y,descendant of concept mapped from leaf +1571000119104,Mixed hyperlipidemia due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +762489000,Acute complication co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +72041000119103,Osteomyelitis due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609570008,"Maturity-onset diabetes of the young, type 3 (disorder)",y,descendant of concept mapped from leaf +72051000119101,Severe malnutrition due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +87451000119102,Heel AND/OR midfoot ulcer due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +84371000119108,Hypoglycemia due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +445353002,Brittle type II diabetes mellitus (finding),y,descendant of concept mapped from leaf +368741000119105,Moderate nonproliferative retinopathy co-occurrent and due to secondary diabetes mellitus (disorder),y,descendant of concept mapped from leaf +368601000119102,Hyperosmolar coma due to secondary diabetes mellitus (disorder),y,descendant of concept mapped from leaf +25412000,Diabetic retinal microaneurysm (disorder),y,descendant of concept mapped from leaf +769217008,Macular edema of right eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +770097006,Clinically significant macular edema co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +40791000119105,Postpartum gestational diabetes mellitus (disorder),y,descendant of concept mapped from leaf +111231000119109,Dyslipidemia with high density lipoprotein below reference range and triglyceride above reference range due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +243421000119104,Proteinuria due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +16010871000119106,Gangrene of toe of right foot (disorder),y,descendant of concept mapped from leaf +82571000119107,Traction retinal detachment co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +71721000119101,Nephrotic syndrome due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +10656271000119102,Skin ulcer of toe due to diabetes mellitus type 2 (disorder),y,descendant of concept mapped from leaf +712882000,Autonomic neuropathy co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +40801000119106,Gestational diabetes mellitus complicating pregnancy (disorder),y,descendant of concept mapped from leaf +190407009,Malnutrition-related diabetes mellitus with renal complications (disorder),y,descendant of concept mapped from leaf +46894009,"Gestational diabetes mellitus, class A>2< (disorder)",y,descendant of concept mapped from leaf +110996009,Armanni-Ebstein kidney (disorder),y,descendant of concept mapped from leaf +60951000119105,Blindness co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +90741000119107,Chronic kidney disease stage 3 due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +8801005,Secondary diabetes mellitus (disorder),y,descendant of concept mapped from leaf +31321000119102,Diabetes mellitus type 1 without retinopathy (disorder),y,descendant of concept mapped from leaf +170743005,Initial diabetic assessment (regime/therapy),y,descendant of concept mapped from leaf +39181008,Radiculoplexus neuropathy co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +97621000119107,Stasis ulcer due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +97341000119105,Proliferative retinopathy with retinal edema due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +199228009,Diabetes mellitus in the puerperium - baby delivered during previous episode of care (disorder),y,descendant of concept mapped from leaf +28032008,Insulin dependent diabetes mellitus type IB (disorder),y,descendant of concept mapped from leaf +87921000119104,Cranial nerve palsy co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +16010831000119108,Gangrene of toe of bilateral feet (disorder),y,descendant of concept mapped from leaf +71421000119105,Hypertension in chronic kidney disease due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +110171000119107,Ulcer of lower extremity due to diabetes mellitus type 2 (disorder),y,descendant of concept mapped from leaf +4783006,Maternal diabetes mellitus with hypoglycemia affecting fetus OR newborn (disorder),y,descendant of concept mapped from leaf +90781000119102,Microalbuminuria due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +399864000,Macular edema not clinically significant co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769218003,Macular edema of left eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +237603002,Transitory neonatal diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769185003,Moderate nonproliferative retinopathy of right eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +24203005,"Extreme insulin resistance with acanthosis nigricans, hirsutism AND abnormal insulin receptors (disorder)",y,descendant of concept mapped from leaf +770096002,Erectile dysfunction co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +399870006,Non-high-risk proliferative diabetic retinopathy with no macular edema (disorder),y,descendant of concept mapped from leaf +237652003,Insulin resistance - type B (disorder),y,descendant of concept mapped from leaf +190447002,Steroid-induced diabetes (disorder),y,descendant of concept mapped from leaf +96441000119101,Chronic kidney disease due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +709147009,Gingivitis co-occurrent with diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609569007,Diabetes mellitus due to genetic defect in insulin action (disorder),y,descendant of concept mapped from leaf +170744004,Follow-up diabetic assessment (regime/therapy),y,descendant of concept mapped from leaf +439051004,Dietary education for gestational diabetes (procedure),y,descendant of concept mapped from leaf +769184004,Mild nonproliferative retinopathy of left eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609577006,"Maturity-onset diabetes of the young, type 10 (disorder)",y,descendant of concept mapped from leaf +10754881000119104,Diabetes mellitus in mother complicating childbirth (disorder),y,descendant of concept mapped from leaf +609578001,"Maturity-onset diabetes of the young, type 11 (disorder)",y,descendant of concept mapped from leaf +190412005,Malnutrition-related diabetes mellitus without complications (disorder),y,descendant of concept mapped from leaf +87441000119104,Ankle ulcer due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +791000119109,Angina associated with type II diabetes mellitus (disorder),y,descendant of concept mapped from leaf +368051000119109,Hyperglycemia due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +850581000000106,High risk of diabetes mellitus annual review (regime/therapy),y,descendant of concept mapped from leaf +230796005,Non-diabetic hypoglycemic coma (disorder),y,descendant of concept mapped from leaf +768792007,Cataract of right eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +724205009,Laminopathy type Decaudain Vigouroux (disorder),y,descendant of concept mapped from leaf +731000119105,Chronic kidney disease stage 3 associated with type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +82541000119100,Traction retinal detachment co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +140391000119101,Ulcer of toe due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +716362006,Gingival disease co-occurrent with diabetes mellitus (disorder),y,descendant of concept mapped from leaf +138891000119109,Moderate nonproliferative retinopathy co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +737212004,Diabetes mellitus caused by chemical (disorder),y,descendant of concept mapped from leaf +104951000119106,Diabetic vitreous hemorrhage due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +421365002,Peripheral circulatory disorder associated with type I diabetes mellitus (disorder),y,descendant of concept mapped from leaf +75022004,"Gestational diabetes mellitus, class A>1< (disorder)",y,descendant of concept mapped from leaf +769188001,Severe nonproliferative retinopathy of left eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +421725003,Hypoglycemic coma in diabetes mellitus (disorder),y,descendant of concept mapped from leaf +768799003,Iritis of bilateral eyes co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +368171000119104,Dermatitis due to drug induced diabetes mellitus (disorder),y,descendant of concept mapped from leaf +137941000119106,Hyperlipidemia due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +770098001,Cranial nerve palsy co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609565001,Permanent neonatal diabetes mellitus (disorder),y,descendant of concept mapped from leaf +51002006,Diabetes mellitus associated with pancreatic disease (disorder),y,descendant of concept mapped from leaf +71791000119104,Peripheral neuropathy co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +399862001,Proliferative diabetic retinopathy - high risk with no macular edema (disorder),y,descendant of concept mapped from leaf +609574004,"Maturity-onset diabetes of the young, type 7 (disorder)",y,descendant of concept mapped from leaf +190416008,Steroid-induced diabetes mellitus without complication (disorder),y,descendant of concept mapped from leaf +426907004,Small vessel disease due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +427027005,Lumbosacral radiculoplexus neuropathy co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609573005,"Maturity-onset diabetes of the young, type 6 (disorder)",y,descendant of concept mapped from leaf +371087003,Diabetic foot ulcer (disorder),y,descendant of concept mapped from leaf +735200002,Absence of lower limb due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +91352004,Diabetes mellitus due to structurally abnormal insulin (disorder),y,descendant of concept mapped from leaf +609581006,"Diabetes mellitus, transient neonatal 3 (disorder)",y,descendant of concept mapped from leaf +1054231000000103,Referral to community diabetes antenatal clinic (procedure),y,descendant of concept mapped from leaf +721000119107,Chronic kidney disease stage 4 associated with type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +368551000119104,Dyslipidemia due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +368591000119109,Cheiropathy due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +1531000119102,Diabetic dermopathy associated with diabetes mellitus type 2 (disorder),y,descendant of concept mapped from leaf +428007007,Erectile dysfunction co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +140521000119107,Ischemic foot ulcer due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +120711000119108,Hypoglycemic unawareness in type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +741000119101,Chronic kidney disease stage 2 associated with type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +23045005,Insulin dependent diabetes mellitus type IA (disorder),y,descendant of concept mapped from leaf +399869005,High risk proliferative diabetic retinopathy not amenable to photocoagulation (disorder),y,descendant of concept mapped from leaf +1521000119100,Diabetic foot ulcer associated with type II diabetes mellitus (disorder),y,descendant of concept mapped from leaf +140531000119105,Neuropathic foot ulcer due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +399877009,Very severe nonproliferative retinopathy with clinically significant macular edema co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +720519003,"Atherosclerosis, deafness, diabetes, epilepsy, nephropathy syndrome (disorder)",y,descendant of concept mapped from leaf +190406000,Malnutrition-related diabetes mellitus with ketoacidosis (disorder),y,descendant of concept mapped from leaf +111307005,Leprechaunism syndrome (disorder),y,descendant of concept mapped from leaf +427571000,Lumbosacral radiculoplexus neuropathy co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +698472009,Blood glucose monitoring (regime/therapy),y,descendant of concept mapped from leaf +127991000119101,Hypertension concurrent and due to end stage renal disease on dialysis due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +734022008,Wolfram-like syndrome (disorder),y,descendant of concept mapped from leaf +123763000,Houssay's syndrome (disorder),y,descendant of concept mapped from leaf +199231005,Pre-existing malnutrition-related diabetes mellitus (disorder),y,descendant of concept mapped from leaf +1501000119109,Proliferative diabetic retinopathy associated with type II diabetes mellitus (disorder),y,descendant of concept mapped from leaf +109171000119104,Retinal edema co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +735539005,Metabolic acidosis co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +1025251000000107,National Health Service Diabetes Prevention Programme completed (situation),y,descendant of concept mapped from leaf +137931000119102,Hyperlipidemia due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +199230006,Pre-existing type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +768794008,Cataract of bilateral eyes co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +164881000119109,Foot ulcer due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +399873008,Severe nonproliferative retinopathy without macular edema co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +112991000000101,Lipoatrophic diabetes mellitus without complication (disorder),y,descendant of concept mapped from leaf +10661671000119102,Ulcer of right foot co-occurrent and due to diabetes mellitus type 2 (disorder),y,descendant of concept mapped from leaf +19378003,Pseudotabes co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +1491000119102,Diabetic vitreous hemorrhage associated with type II diabetes mellitus (disorder),y,descendant of concept mapped from leaf +444074000,Type I diabetes mellitus well controlled (finding),y,descendant of concept mapped from leaf +781000119106,Diabetic neuropathic arthropathy associated with type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769221001,Clinically significant macular edema of right eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +703136005,Diabetes mellitus in remission (disorder),y,descendant of concept mapped from leaf +18521000119106,Microalbuminuria due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +703137001,Type I diabetes mellitus in remission (disorder),y,descendant of concept mapped from leaf +768798006,Iritis of left eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +420825003,Gangrene associated with type I diabetes mellitus (disorder),y,descendant of concept mapped from leaf +716020005,Diabetic embryopathy (disorder),y,descendant of concept mapped from leaf +399865004,Very severe proliferative diabetic retinopathy (disorder),y,descendant of concept mapped from leaf +609579009,"Diabetes mellitus, transient neonatal 1 (disorder)",y,descendant of concept mapped from leaf +10656231000119100,Skin ulcer of toe due to diabetes mellitus type 1 (disorder),y,descendant of concept mapped from leaf +41911000119107,Glaucoma due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +16010791000119102,Gangrene of toe of left foot (disorder),y,descendant of concept mapped from leaf +609571007,"Maturity-onset diabetes of the young, type 4 (disorder)",y,descendant of concept mapped from leaf +39127005,Symmetric proximal motor neuropathy co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +82581000119105,Rubeosis iridis co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +276560009,Diabetes mellitus in neonate small for gestational age (disorder),y,descendant of concept mapped from leaf +170757007,Fundoscopy - diabetic check (regime/therapy),y,descendant of concept mapped from leaf +420996007,Coma associated with malnutrition-related diabetes mellitus (disorder),y,descendant of concept mapped from leaf +97331000119101,Macular edema and retinopathy due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +735537007,Hyperosmolar hyperglycemic coma due to diabetes mellitus without ketoacidosis (disorder),y,descendant of concept mapped from leaf +691000119103,Erectile dysfunction associated with type I diabetes mellitus (disorder),y,descendant of concept mapped from leaf +70694009,Diabetes mellitus AND insipidus with optic atrophy AND deafness (disorder),y,descendant of concept mapped from leaf +127011001,Sensory neuropathy co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +102781000119107,Sensory neuropathy due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +199227004,Diabetes mellitus during pregnancy - baby not yet delivered (disorder),y,descendant of concept mapped from leaf +399866003,Diabetic retinal venous beading (disorder),y,descendant of concept mapped from leaf +140381000119104,Neuropathic toe ulcer due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +408540003,Diabetes mellitus caused by non-steroid drugs (disorder),y,descendant of concept mapped from leaf +421966007,Non-ketotic non-hyperosmolar coma associated with diabetes mellitus (disorder),y,descendant of concept mapped from leaf +120731000119103,Hypoglycemia due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +79554005,Asymmetric proximal motor neuropathy co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +28331000119107,Retinal edema co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +441628001,Multiple complications due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +768797001,Iritis of right eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +359611005,Diabetic neuropathy with neurologic complication (disorder),y,descendant of concept mapped from leaf +140101000119109,Hypertension in chronic kidney disease stage 5 due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +38046004,Diffuse type diabetic glomerulosclerosis (disorder),y,descendant of concept mapped from leaf +399874002,Proliferative diabetic retinopathy - high risk with clinically significant macular edema (disorder),y,descendant of concept mapped from leaf +420683009,Neurological disorder associated with malnutrition-related diabetes mellitus (disorder),y,descendant of concept mapped from leaf +119831000119106,Hypoglycemia unawareness in type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +72061000119104,Osteomyelitis due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +71701000119105,Hypertension in chronic kidney disease due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +2751001,Fibrocalculous pancreatic diabetes (disorder),y,descendant of concept mapped from leaf +105401000119101,Diabetes mellitus due to pancreatic injury (disorder),y,descendant of concept mapped from leaf +427134009,Small vessel disease due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +816711000000104,Gestational diabetes mellitus annual review (regime/therapy),y,descendant of concept mapped from leaf +441656006,Hyperglycemic crisis in diabetes mellitus (disorder),y,descendant of concept mapped from leaf +81830002,Mononeuropathy simplex co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +421305000,Persistent microalbuminuria associated with type I diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769181007,Preproliferative retinopathy of right eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +1097141000000101,Remote diabetes structured education and support programme completed (situation),y,descendant of concept mapped from leaf +11687002,Gestational diabetes mellitus (disorder),y,descendant of concept mapped from leaf +72141000119104,Chronic ulcer of skin due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769190000,Very severe nonproliferative retinopathy of right eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +237600004,Malnutrition-related diabetes mellitus - fibrocalculous (disorder),y,descendant of concept mapped from leaf +723074006,Renal papillary necrosis due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +190410002,Malnutrition-related diabetes mellitus with peripheral circulatory complications (disorder),y,descendant of concept mapped from leaf +413183008,Diabetes mellitus caused by non-steroid drugs without complication (disorder),y,descendant of concept mapped from leaf +237613005,Hyperproinsulinemia (disorder),y,descendant of concept mapped from leaf +199229001,Pre-existing type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +199225007,Diabetes mellitus during pregnancy - baby delivered (disorder),y,descendant of concept mapped from leaf +62260007,Pretibial pigmental patches in diabetes (disorder),y,descendant of concept mapped from leaf +42954008,Diabetes mellitus associated with receptor abnormality (disorder),y,descendant of concept mapped from leaf +106281000119103,Pre-existing diabetes mellitus in mother complicating childbirth (disorder),y,descendant of concept mapped from leaf +609564002,Pre-existing type 1 diabetes mellitus in pregnancy (disorder),y,descendant of concept mapped from leaf +703138006,Type II diabetes mellitus in remission (disorder),y,descendant of concept mapped from leaf +368721000119104,Nonproliferative retinopathy co-occurrent and due to secondary diabetes mellitus (disorder),y,descendant of concept mapped from leaf +10753491000119101,Gestational diabetes mellitus in childbirth (disorder),y,descendant of concept mapped from leaf +721088003,"Developmental delay, epilepsy, neonatal diabetes syndrome (disorder)",y,descendant of concept mapped from leaf +72031000119107,Severe malnutrition due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +140111000119107,Hypertension in chronic kidney disease stage 4 due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609563008,Pre-existing diabetes mellitus in pregnancy (disorder),y,descendant of concept mapped from leaf +103981000119101,Proliferative diabetic retinopathy following surgery (disorder),y,descendant of concept mapped from leaf +60961000119107,Nonproliferative retinopathy co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +201000119106,Disorder associated with well controlled type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +164971000119101,Type 2 diabetes mellitus controlled by diet (finding),y,descendant of concept mapped from leaf +428896009,Hyperosmolality due to uncontrolled type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +87471000119106,Ankle ulcer due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +722454003,"Intellectual disability, craniofacial dysmorphism, hypogonadism, diabetes mellitus syndrome (disorder)",y,descendant of concept mapped from leaf +104961000119108,Retinal ischemia co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +707221002,Diabetic glomerulosclerosis (disorder),y,descendant of concept mapped from leaf +713457002,Neovascular glaucoma co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +63510008,Nodular type diabetic glomerulosclerosis (disorder),y,descendant of concept mapped from leaf +367261000119100,Hyperosmolarity co-occurrent and due to drug induced diabetes mellitus (disorder),y,descendant of concept mapped from leaf +712883005,Autonomic neuropathy co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +128001000119105,Hypertension concurrent and due to end stage renal disease on dialysis due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +367991000119101,Hyperglycemia due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769222008,Clinically significant macular edema of left eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +10660471000119109,Ulcer of left foot co-occurrent and due to diabetes mellitus type 2 (disorder),y,descendant of concept mapped from leaf +1481000119100,Diabetes mellitus type 2 without retinopathy (disorder),y,descendant of concept mapped from leaf +427943001,Ophthalmoplegia co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +368711000119106,Mild nonproliferative retinopathy co-occurrent and due to secondary diabetes mellitus (disorder),y,descendant of concept mapped from leaf +768793002,Cataract of left eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609568004,Diabetes mellitus due to genetic defect in beta cell function (disorder),y,descendant of concept mapped from leaf +38205001,Diarrhea co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +126535008,Motor polyneuropathy co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +127012008,Lipoatrophic diabetes (disorder),y,descendant of concept mapped from leaf +735538002,Lactic acidosis co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769191001,Very severe nonproliferative retinopathy of left eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609580007,"Diabetes mellitus, transient neonatal 2 (disorder)",y,descendant of concept mapped from leaf +60971000119101,Proliferative retinopathy due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +237651005,Insulin resistance - type A (disorder),y,descendant of concept mapped from leaf +71441000119104,Nephrotic syndrome due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +9859006,Type 2 diabetes mellitus with acanthosis nigricans (disorder),y,descendant of concept mapped from leaf +57886004,Protein-deficient diabetes mellitus (disorder),y,descendant of concept mapped from leaf +138911000119106,Mild nonproliferative retinopathy co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +472699005,Gestational diabetes mellitus uncontrolled (finding),y,descendant of concept mapped from leaf +399868002,Diabetic intraretinal microvascular anomaly (disorder),y,descendant of concept mapped from leaf +76751001,"Diabetes mellitus in mother complicating pregnancy, childbirth AND/OR puerperium (disorder)",y,descendant of concept mapped from leaf +310387003,Diabetic intracapillary glomerulosclerosis (disorder),y,descendant of concept mapped from leaf +75524006,Malnutrition related diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769186002,Moderate nonproliferative retinopathy of left eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +82551000119103,Rubeosis iridis co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +770324004,Retinal ischemia co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +704241002,Fetal hypertrophic cardiomyopathy due to maternal diabetes mellitus (disorder),y,descendant of concept mapped from leaf +711000119100,Chronic kidney disease stage 5 associated with type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +102621000119101,Ulcer of skin co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609575003,"Maturity-onset diabetes of the young, type 8 (disorder)",y,descendant of concept mapped from leaf +769220000,Macular edema co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +444110003,Type II diabetes mellitus well controlled (finding),y,descendant of concept mapped from leaf +199226008,Diabetes mellitus in the puerperium - baby delivered during current episode of care (disorder),y,descendant of concept mapped from leaf +769182000,Preproliferative retinopathy of left eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +419100001,Infection of foot associated with diabetes (disorder),y,descendant of concept mapped from leaf +35777006,Diabetic mononeuropathy multiplex (disorder),y,descendant of concept mapped from leaf +16011271000119104,Gangrene of left foot (disorder),y,descendant of concept mapped from leaf +359642000,Diabetes mellitus type 2 in nonobese (disorder),y,descendant of concept mapped from leaf +701000119103,Mixed hyperlipidemia associated with type II diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609576002,"Maturity-onset diabetes of the young, type 9 (disorder)",y,descendant of concept mapped from leaf +399876000,Very severe nonproliferative retinopathy co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +90761000119106,Chronic kidney disease stage 5 due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +724876003,Lesion of skin co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +16011231000119102,Gangrene of right foot (disorder),y,descendant of concept mapped from leaf +90791000119104,End stage renal disease on dialysis due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +445170001,Macroalbuminuric diabetic nephropathy (disorder),y,descendant of concept mapped from leaf +1511000119107,Diabetic peripheral neuropathy associated with type II diabetes mellitus (disorder),y,descendant of concept mapped from leaf +110181000119105,Peripheral sensory neuropathy due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +721284006,Acidosis due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +140121000119100,Hypertension in chronic kidney disease stage 3 due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +722206009,"Pancreatic hypoplasia, diabetes mellitus, congenital heart disease syndrome (disorder)",y,descendant of concept mapped from leaf +5368009,Drug-induced diabetes mellitus (disorder),y,descendant of concept mapped from leaf +140131000119102,Hypertension in chronic kidney disease stage 2 due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +1054241000000107,Referral to hospital diabetes antenatal clinic (procedure),y,descendant of concept mapped from leaf +87491000119107,Forefoot ulcer due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +609566000,Pregnancy and type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +138881000119106,Mild nonproliferative retinopathy co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +1551000119108,Nonproliferative diabetic retinopathy associated with type II diabetes mellitus (disorder),y,descendant of concept mapped from leaf +721283000,Acidosis due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +761000119102,Dyslipidemia associated with type II diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769219006,Macular edema co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +60991000119100,Blindness co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +81531005,Diabetes mellitus type 2 in obese (disorder),y,descendant of concept mapped from leaf +237601000,Secondary endocrine diabetes mellitus (disorder),y,descendant of concept mapped from leaf +425455002,Diabetic glomerulonephritis (disorder),y,descendant of concept mapped from leaf +108781000119105,Neuropathic ulcer of midfoot AND/OR heel due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +770094004,Cervical radiculoplexus neuropathy co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +90731000119103,Chronic kidney disease stage 2 due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +82980005,Anemia of diabetes (disorder),y,descendant of concept mapped from leaf +138921000119104,Moderate nonproliferative retinopathy co-occurrent and due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +237618001,Insulin-dependent diabetes mellitus secretory diarrhea syndrome (disorder),y,descendant of concept mapped from leaf +368521000119107,Disorder of nerve co-occurrent and due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769187006,Severe nonproliferative retinopathy of right eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +87461000119100,Forefoot ulcer due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +399875001,Non-high-risk proliferative diabetic retinopathy with clinically significant macular edema (disorder),y,descendant of concept mapped from leaf +199223000,"Diabetes mellitus during pregnancy, childbirth and the puerperium (disorder)",y,descendant of concept mapped from leaf +157141000119108,Proteinuria due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +724136006,Diabetic mastopathy (disorder),y,descendant of concept mapped from leaf +90771000119100,End stage renal disease on dialysis due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +399872003,Severe nonproliferative retinopathy with clinically significant macular edema co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +424736006,Peripheral neuropathy co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +769183005,Mild nonproliferative retinopathy of right eye co-occurrent and due to diabetes mellitus (disorder),y,descendant of concept mapped from leaf +59079001,Diabetes mellitus associated with hormonal etiology (disorder),y,descendant of concept mapped from leaf +84361000119102,Insulin reactive hypoglycemia in type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +751000119104,Chronic kidney disease stage 1 associated with type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +401088000,Diabetes mellitus with persistent proteinuria (disorder),n,via Query Table +28453007,Maturity onset diabetes mellitus in young (disorder),n,via Query Table +279531000000105,Referral to community diabetes specialist nurse ,n,via Query Table +811401000000101,Referral to community diabetes service ,n,via Query Table +372041000000109,Does rotate site of insulin injection (finding),n,via Query Table +488181000000102,Impaired vision due to diabetic retinopathy ,n,via Query Table +310311007,HbA1 7-10% - borderline control (finding),n,via Query Table +408660003,Type II diabetes mellitus with ketoacidosis (disorder),n,via Query Table +376001000000105,Diabetic femoral mononeuropathy (disorder),n,via Query Table +171871000000108,O/E - right eye clinically significant macular oedema,n,via Query Table +24927004,Diabetes with ketoacidosis (disorder),n,via Query Table +309597007,Foot abnormality - diabetes-related (finding),n,via Query Table +191951000000102,Patient held diabetic record declined,n,via Query Table +164491000000101,Diabetes resolved,n,via Query Table +198671000000109,Type 2 diabetes mellitus with gastroparesis (disorder),n,via Query Table +372069003,Diabetes mellitus with complication (disorder),n,via Query Table +314368001,Type I diabetes mellitus with mononeuropathy (disorder),n,via Query Table +1561000119105,Diabetic peripheral neuropathy associated with type I diabetes mellitus (disorder),n,via Query Table +376191000000104,Diabetic amyotrophy (disorder),n,via Query Table +776361000000106,Diabetic erectile dysfunction review ,n,via Query Table +593701000000108,Other specified diabetes mellitus with ophthalmic complications (disorder),n,via Query Table +188101000000106,Diabetes care plan agreed,n,via Query Table +200505002,"[X]Pre-existing diabetes mellitus, unspecified (disorder)",n,via Query Table +267382005,Diabetes mellitus with neurological manifestation (disorder),n,via Query Table +762731000000107,Diabetic monitoring - injection sites normal (finding),n,via Query Table +21858001,Diabetes with renal manifestations (disorder),n,via Query Table +851511000000108,Diabetes clinical pathway ,n,via Query Table +190345009,"Diabetes mellitus, juvenile type, with ophthalmic manifestation (disorder)",n,via Query Table +306411000000108,Attended expert patient education versus routine treatment structured diabetes programme ,n,via Query Table +374761000000101,Excluded from screening - declined - diabetic retinopathy screening administration ,n,via Query Table +170851000000107,Family/carer attended diabetes structured education programme,n,via Query Table +1051111000000101,Pregnancy and non-insulin-dependent diabetes mellitus,n,via Query Table +497731000000102,[D]Gangrene of toe in diabetic (situation),n,via Query Table +334731000000108,Referral to diabetes special interest general practitioner ,n,via Query Table +292571000000107,Cystic fibrosis related diabetes mellitus,n,via Query Table +190351004,"Diabetes mellitus, adult onset, with neurological manifestation (disorder)",n,via Query Table +306611000000106,Diabetes structured education programme declined ,n,via Query Table +401112005,Type 2 diabetes mellitus with persistent microalbuminuria (disorder),n,via Query Table +374751000000104,Declined diabetic retinopathy screening (finding),n,via Query Table +207791000000100,Referral to diabetic register,n,via Query Table +371055001,Type I diabetes mellitus with ketoacidosis (disorder),n,via Query Table +190346005,"Diabetes mellitus, adult onset, with ophthalmic manifestation (disorder)",n,via Query Table +212021000000102,Referral to diabetic eye clinic,n,via Query Table +521391000000106,Education in self management of diabetes (procedure),n,via Query Table +424989000,Diabetic gastroparesis associated with type 2 diabetes mellitus (disorder),n,via Query Table +491121000000106,Eligible for diabetic retinopathy screening ,n,via Query Table +884071000000100,Education about diabetes and driving (procedure),n,via Query Table +401087005,Diabetes mellitus with persistent microalbuminuria (disorder),n,via Query Table +300121000000105,Diabetes mellitus type I diet education (procedure),n,via Query Table +170061000000103,Transition of diabetes care options discussed,n,via Query Table +207931000000103,Patient consent given for addition to diabetic register,n,via Query Table +314371009,Type II diabetes mellitus with polyneuropathy (disorder),n,via Query Table +374821000000102,Excluded from screening - terminal illness - diabetic retinopathy screening administration ,n,via Query Table +414601000000106,"[X]Pre-existing diabetes mellitus, unspecified",n,via Query Table +593671000000109,Diabetes mellitus NOS with hyperosmolar coma (disorder),n,via Query Table +619991000000106,Other specified diabetes mellitus with neurological complications (disorder),n,via Query Table +856321000000104,O/E - Left diabetic foot at increased risk,n,via Query Table +888181000000105,Diabetes mellitus in remission ,n,via Query Table +491151000000101,Eligibility permanently inactive for diabetic retinopathy screening ,n,via Query Table +412777005,Diabetes clinical management plan (qualifier value),n,via Query Table +754131000000109,Type 2 diabetic dietary review ,n,via Query Table +420491007,"Gestational diabetes mellitus, class H (disorder)",n,via Query Table +307011000000104,Did not complete diabetes education and self management for ongoing and newly diagnosed structured programme ,n,via Query Table +966371000000102,Has diabetes identity card (finding),n,via Query Table +811991000000100,Diabetes self-management plan agreed ,n,via Query Table +307001000000101,Did not complete diabetes education and self management for ongoing and newly diagnosed structured programme ,n,via Query Table +884081000000103,Education about diabetes and driving ,n,via Query Table +487301000000108,Ineligible for diabetic retinopathy screening ,n,via Query Table +170841000000109,Attended diabetes structured education programme,n,via Query Table +306521000000101,Diabetes education and self management for ongoing and newly diagnosed structured programme completed ,n,via Query Table +752151000000105,Diabetes monitoring invitation by short message service ,n,via Query Table +720970003,Hypoglycemia self management plan (qualifier value),n,via Query Table +71546005,"Gestational diabetes mellitus, class B>1< (disorder)",n,via Query Table +307211000000106,Did not attend expert patient education versus routine treatment diabetes structured education programme ,n,via Query Table +713681000000106,Diabetes monitoring administration NOS (record artifact),n,via Query Table +512571000000101,Patient unsuitable for Diabetes Year of Care programme ,n,via Query Table +966161000000107,Provision of diabetes identity card (procedure),n,via Query Table +837311000000107,Insulin administration education (procedure),n,via Query Table +89841000000103,Exception reporting: diabetes quality indicators (administrative concept),n,via Query Table +215121000000106,Diabetic monitoring - lower risk albumin excretion,n,via Query Table +167261000000100,O/E - left eye stable treated proliferative diabetic retinopathy,n,via Query Table +374831000000100,Excluded from screening - terminal illness - diabetic retinopathy screening administration ,n,via Query Table +787071000000107,Diabetes care plan declined ,n,via Query Table +776571000000106,Diabetic assessment of erectile dysfunction (procedure),n,via Query Table +624691000000109,Diabetes mellitus NOS with neurological manifestation (disorder),n,via Query Table +754111000000101,Type 1 diabetic dietary review ,n,via Query Table +111554008,"Rare form of secondary diabetes mellitus, due to disorder other than malnutrition, protein deficiency, pancreatic disease, hormonal disease, drugs, receptor abnormality, OR genetic syndrome (disorder)",n,via Query Table +338931000000104,Dietary education for gestational diabetes (procedure),n,via Query Table +894751000000105,Hypoglycaemic warning absent ,n,via Query Table +593721000000104,Other specified diabetes mellitus with peripheral circulatory complications (disorder),n,via Query Table +417317008,Diabetes care plan agreed (procedure),n,via Query Table +310309003,HbA1 - diabetic control interpretation (observable entity),n,via Query Table +876391000000103,Conversion to insulin by diabetes specialist nurse ,n,via Query Table +314892000,Type I diabetes mellitus with peripheral angiopathy (disorder),n,via Query Table +23111000000103,Diabetes clinic administration (administrative concept),n,via Query Table +214811000000108,Did not attend diabetic retinopathy clinic,n,via Query Table +267381003,Diabetes mellitus with renal manifestation (disorder),n,via Query Table +167371000000102,O/E - left chronic diabetic foot ulcer,n,via Query Table +213611000000106,Insulin needles changed for each injection,n,via Query Table +510741000000102,Diabetes self management plan (qualifier value),n,via Query Table +421389009,"Gestational diabetes mellitus, class C (disorder)",n,via Query Table +230573007,Diabetic distal sensorimotor polyneuropathy (disorder),n,via Query Table +306971000000108,Did not complete dose adjustment for normal eating diabetes structured education programme ,n,via Query Table +314888007,Type II diabetes mellitus with diabetic cataract (disorder),n,via Query Table +236367002,Renal diabetes (disorder),n,via Query Table +885941000000109,Diabetes structured education programme not available ,n,via Query Table +190365002,Type I diabetes mellitus with neurological complications (disorder),n,via Query Table +401111003,Type 2 diabetes mellitus with persistent proteinuria (disorder),n,via Query Table +870691000000106,In-house diabetes foot screening ,n,via Query Table +191341000000101,Diabetic retinopathy screening offered,n,via Query Table +190364003,Type I diabetes mellitus with ophthalmic complications (disorder),n,via Query Table +751431000000103,Insulin dose changed (situation),n,via Query Table +861561000000102,Diabetic foot screening second letter ,n,via Query Table +314369009,Type I diabetes mellitus with polyneuropathy (disorder),n,via Query Table +816721000000105,Gestational diabetes mellitus annual review ,n,via Query Table +338031000000100,Latent autoimmune diabetes mellitus in adult,n,via Query Table +831021000000108,Provision of diabetes clinical summary,n,via Query Table +306871000000100,Did not attend diabetes structured education programme ,n,via Query Table +861541000000103,Diabetic foot screening invitation first letter ,n,via Query Table +34140002,Diabetic gastroparesis (disorder),n,via Query Table +1024581000000103,Under care of community-based diabetes specialist nurse ,n,via Query Table +888171000000108,Diabetes mellitus in remission (disorder),n,via Query Table +191601000000107,Diabetes care plan agreed,n,via Query Table +273911000000108,Referral for diabetic retinopathy screening ,n,via Query Table +856581000000109,Insulin administration education,n,via Query Table +307151000000104,Did not attend dose adjustment for normal eating diabetes structured education programme ,n,via Query Table +374671000000104,Excluded from screening - under ophthalmic care - diabetic retinopathy screening administration ,n,via Query Table +167361000000109,O/E - right chronic diabetic foot ulcer,n,via Query Table +307191000000107,Did not attend diabetes education and self management for ongoing and newly diagnosed structured programme ,n,via Query Table +593681000000106,Other specified diabetes mellitus with renal complications (disorder),n,via Query Table +198661000000102,Type 1 diabetes mellitus with gastroparesis (disorder),n,via Query Table +729981000000105,Renal cysts and diabetes syndrome (disorder),n,via Query Table +408416008,On examination - left eye diabetic maculopathy (disorder),n,via Query Table +286451000000100,Cystic fibrosis related diabetes mellitus (disorder),n,via Query Table +374701000000100,Excluded from screening - blind - screening contraindicated - diabetic retinopathy screening administration ,n,via Query Table +374641000000105,Excluded from screening - deceased - diabetic retinopathy screening administration ,n,via Query Table +425691000000105,[X]Malnutrition-related diabetes mellitus with unspecified complications (disorder),n,via Query Table +276661000000105,Attended DESMOND diabetes structured education programme ,n,via Query Table +275522008,Diabetes mellitus with gangrene (disorder),n,via Query Table +974131000000100,Maturity onset diabetes of the young type 5 (disorder),n,via Query Table +54181000,Diabetes-nephrosis syndrome (disorder),n,via Query Table +630491000000104,Other specified diabetes mellitus with ketoacidosis (disorder),n,via Query Table +306491000000104,Dose adjustment for normal eating structured diabetes education programme completed ,n,via Query Table +359939009,Maternal diabetes mellitus (disorder),n,via Query Table +408287009,Type 1 diabetes mellitus with exudative maculopathy (disorder),n,via Query Table +771691000000102,History of diabetes mellitus type 2 (situation),n,via Query Table +487331000000102,Impaired vision due to diabetic retinopathy ,n,via Query Table +408415007,On examination - right eye diabetic maculopathy (disorder),n,via Query Table +990851000000102,Provision of diabetes identity card,n,via Query Table +983461000000109,Diabetic carbohydrate counting diet ,n,via Query Table +190369008,Type I diabetes mellitus with gangrene (disorder),n,via Query Table +578651000000101,Diabetic - poor control NOS (finding),n,via Query Table +487321000000104,Eligibility permanently inactive for diabetic retinopathy screening ,n,via Query Table +374711000000103,Excluded from screening - blind - screening contraindicated - diabetic retinopathy screening administration ,n,via Query Table +449851000000103,"[X]Pre-existing diabetes mellitus, unspecified (disorder)",n,via Query Table +754091000000106,Diabetic dietary review ,n,via Query Table +371056000,Type II diabetes mellitus with complication (disorder),n,via Query Table +190340004,"Diabetes mellitus, adult onset, with renal manifestation (disorder)",n,via Query Table +772031000000104,History of diabetes mellitus type 1 (situation),n,via Query Table +990751000000105,Has diabetes identity card,n,via Query Table +306711000000100,Referral to dose adjustment for normal eating diabetes structured education programme ,n,via Query Table +306461000000105,Attended dose adjustment for normal eating structured diabetes education programme ,n,via Query Table +190366001,Type I diabetes mellitus with multiple complications (disorder),n,via Query Table +794591000000105,Blood glucose monitoring (regime/therapy),n,via Query Table +442541000000107,[X]Other specified diabetes mellitus (disorder),n,via Query Table +171881000000105,O/E - left eye clinically significant macular oedema,n,via Query Table +25907005,Diabetic gangrene (disorder),n,via Query Table +771521000000101,History of autosomal dominant diabetes mellitus (situation),n,via Query Table +212031000000100,Referral to diabetic eye clinic,n,via Query Table +286912007,Diabetes with ketoacidosis - no coma (disorder),n,via Query Table +855051000000102,Proteinuric diabetic nephropathy,n,via Query Table +1024561000000107,Under care of hospital-based diabetes specialist nurse ,n,via Query Table +89981000000104,Excepted from diabetes quality indicators: Informed dissent (administrative concept),n,via Query Table +888221000000100,Type II diabetes mellitus in remission ,n,via Query Table +909451000000107,Diabetes Distress Scale 17 item,n,via Query Table +421164006,Hypoglycemic coma in type II diabetes mellitus (disorder),n,via Query Table +487311000000105,Eligibility temporarily inactive for diabetic retinopathy screening ,n,via Query Table +186901000000105,O/E - sight threatening diabetic retinopathy,n,via Query Table +190326000,"Diabetes mellitus, adult onset, with ketoacidosis (disorder)",n,via Query Table +207801000000101,Referral to diabetic register,n,via Query Table +990741000000107,Diabetic on non-insulin injectable medication,n,via Query Table +167251000000103,O/E - right eye stable treated proliferative diabetic retinopathy,n,via Query Table +167271000000107,O/E - right eye clinically significant macular oedema,n,via Query Table +207191000000104,Referral to multidisciplinary diabetic clinic,n,via Query Table +487291000000109,Eligible for diabetic retinopathy screening ,n,via Query Table +371086007,Diabetes mellitus with skin ulcer (disorder),n,via Query Table +33248009,Diabetes with non-ketotic non-hyperosmolar coma (disorder),n,via Query Table +466171000000103,[X]Malnutrition-related diabetes mellitus with unspecified complications,n,via Query Table +306541000000108,Expert patient education versus routine treatment diabetes structured education programme completed ,n,via Query Table +371801000000109,Eligible for diabetic retinopathy screening ,n,via Query Table +397201000000107,[X]Unspecified diabetes mellitus with renal complications (disorder),n,via Query Table +417256004,Diabetic retinopathy screening offered (finding),n,via Query Table +344651000000109,Insulin initiation - enhanced services administration ,n,via Query Table +306721000000106,Referral to dose adjustment for normal eating diabetes structured education programme ,n,via Query Table +214801000000106,Insulin needles changed less than once a day,n,via Query Table +838741000000108,Referral to community diabetic specialist nurse declined ,n,via Query Table +190356009,"Diabetes mellitus, adult onset, with peripheral circulatory disorder (disorder)",n,via Query Table +414908005,On examination - clinically significant macular edema of right eye (disorder),n,via Query Table +190358005,IDDM with peripheral circulatory disorder (disorder),n,via Query Table +783911000000109,No evidence of diabetic nephropathy ,n,via Query Table +307031000000107,Did not complete expert patient education versus routine treatment diabetes structured education programme ,n,via Query Table +593691000000108,Diabetes mellitus with nephropathy NOS (disorder),n,via Query Table +171961000000107,O/E - right chronic diabetic foot ulcer,n,via Query Table +446641003,Renal cysts and diabetes syndrome (disorder),n,via Query Table +420738003,"Gestational diabetes mellitus, class T (disorder)",n,via Query Table +190370009,Type I diabetes mellitus with retinopathy (disorder),n,via Query Table +658111000000103,Diabetes mellitus NOS with unspecified complication (disorder),n,via Query Table +374801000000106,Excluded from screening - no current contact details - diabetic retinopathy screening administration ,n,via Query Table +776581000000108,Diabetic assessment of erectile dysfunction ,n,via Query Table +306941000000102,Did not complete diabetes structured education programme ,n,via Query Table +750731000000100,Excepted from diabetes quality indicators: Service unavailable ,n,via Query Table +167281000000109,O/E - left eye clinically significant macular oedema,n,via Query Table +421707005,Polyneuropathy associated with type II diabetes mellitus (disorder),n,via Query Table +491141000000104,Eligibility temporarily inactive for diabetic retinopathy screening ,n,via Query Table +190325001,"Diabetes mellitus, juvenile type, with ketoacidosis (disorder)",n,via Query Table +527701000000107,Diabetic on subcutaneous treatment ,n,via Query Table +190408004,Malnutrition-related diabetes mellitus with ophthalmic complications (disorder),n,via Query Table +171851000000104,O/E - right eye stable treated proliferative diabetic retinopathy,n,via Query Table +720703008,Hypoglycemia clinical management plan (qualifier value),n,via Query Table +862491000000101,Diabetic foot screening invitation third letter ,n,via Query Table +279341000000106,Diabetes type 2 review ,n,via Query Table +306481000000101,Dose adjustment for normal eating structured diabetes education programme completed ,n,via Query Table +374891000000104,Excluded from screening - physical disability - diabetic retinopathy screening administration ,n,via Query Table +190409007,Malnutrition-related diabetes mellitus with neurological complications (disorder),n,via Query Table +454441000000100,[X]Malnutrition-related diabetes mellitus with other specified complications,n,via Query Table +551831000000104,Diabetes mellitus NOS with ketoacidotic coma (disorder),n,via Query Table +658071000000109,Diabetes mellitus with unspecified complication (disorder),n,via Query Table +944151000000106,Diabetic peripheral neuropathic pain ,n,via Query Table +190386002,Type II diabetes mellitus with ophthalmic complications (disorder),n,via Query Table +190329007,Diabetes mellitus with hyperosmolar coma (disorder),n,via Query Table +887871000000103,Diabetes Year of Care annual review ,n,via Query Table +306451000000107,Attended dose adjustment for normal eating structured diabetes education programme ,n,via Query Table +306781000000107,Referral to expert patient education versus routine treatment diabetes structured education programme ,n,via Query Table +374621000000103,Excluded from screening - moved away - diabetic retinopathy screening administration ,n,via Query Table +374731000000106,Excluded from screening - no longer categorised as diabetic - diabetic retinopathy screening administration ,n,via Query Table +662471000000105,Diabetic monitoring NOS (regime/therapy),n,via Query Table +310310008,HbA1 less than 7% - good control (finding),n,via Query Table +886701000000103,Non-diabetic hyperglycaemia (disorder),n,via Query Table +1025261000000105,National Health Service Diabetes Prevention Programme completed ,n,via Query Table +870751000000107,In-house diabetic foot screening follow-up appointment ,n,via Query Table +891761000000105,Insulin passport not checked,n,via Query Table +1025221000000102,National Health Service Diabetes Prevention Programme not completed ,n,via Query Table +365846006,HbA1 - diabetic control finding (finding),n,via Query Table +300521000000104,Completed diabetes structured education programme ,n,via Query Table +974141000000109,Maturity onset diabetes of the young type 5 ,n,via Query Table +345051000000103,Initiation of insulin ,n,via Query Table +170776009,Diabetes management plan given (regime/therapy),n,via Query Table +587871000000104,Diabetic mononeuritis NOS (disorder),n,via Query Table +279541000000101,Referral to community diabetes specialist nurse ,n,via Query Table +758621000000105,Advised about diabetes and driving (situation),n,via Query Table +420414003,Multiple complications of type II diabetes mellitus (disorder),n,via Query Table +593661000000102,Diabetes mellitus NOS with ketoacidosis (disorder),n,via Query Table +621661000000100,Hypoglycemic coma NOS (disorder),n,via Query Table +292911000000106,Attended DESMOND structured programme (finding),n,via Query Table +253201000000101,Diabetic digital retinopathy screening offered ,n,via Query Table +213291000000100,Insulin therapy declined,n,via Query Table +408417004,Type 2 diabetes mellitus with exudative maculopathy (disorder),n,via Query Table +521401000000109,Education for self management of diabetes ,n,via Query Table +213601000000109,Insulin needles changed for each injection,n,via Query Table +754151000000102,Diabetic dietary review declined ,n,via Query Table +374611000000109,Excluded from screening - moved away - diabetic retinopathy screening administration ,n,via Query Table +491161000000103,Excluded from diabetic retinopathy screening ,n,via Query Table +374681000000102,Excluded from screening - under ophthalmic care - diabetic retinopathy screening administration ,n,via Query Table +190357000,"Diabetes mellitus, adult with gangrene (disorder)",n,via Query Table +867901000000100,Erectile dysfunction due to diabetes mellitus ,n,via Query Table +111557001,Diabetes with coma (disorder),n,via Query Table +207023003,[D]Widespread diabetic foot gangrene (situation),n,via Query Table +306761000000103,Referral to diabetes education and self management for ongoing and newly diagnosed diabetes structured programme ,n,via Query Table +213581000000100,Insulin needles changed daily,n,via Query Table +870711000000108,In-house diabetic foot screening first appointment ,n,via Query Table +188281000000107,Discharged from care of diabetes specialist nurse,n,via Query Table +306981000000105,Did not complete dose adjustment for normal eating diabetes structured education programme ,n,via Query Table +275918005,Unstable diabetes mellitus (disorder),n,via Query Table +724810001,Radiculoplexoneuropathy due to diabetes mellitus (disorder),n,via Query Table +832131000000100,Diabetes self-management plan review,n,via Query Table +698961000000108,Diabetes mellitus - unspecified whether during pregnancy or the puerperium (disorder),n,via Query Table +857151000000105,"Diabetes insipidus, diabetes mellitus, optic atrophy and deafness",n,via Query Table +371791000000105,Eligible for diabetic retinopathy screening ,n,via Query Table +190387006,Type II diabetes mellitus with neurological complications (disorder),n,via Query Table +267383000,Diabetes mellitus with peripheral circulatory disorder (disorder),n,via Query Table +968451000000103,Not suitable for Diabetes Education and Self Management for Ongoing and Newly Diagnosed programme (finding),n,via Query Table +279311000000105,Diabetes type 1 review ,n,via Query Table +850591000000108,High risk of diabetes mellitus annual review ,n,via Query Table +1050941000000108,Non-diabetic hyperglycaemia,n,via Query Table +374741000000102,Excluded from screening - no longer categorised as diabetic - diabetic retinopathy screening administration ,n,via Query Table +977211000000109,Recommendation to self-refer for diabetes structured education ,n,via Query Table +12811000119100,Complication due to diabetes mellitus type 2 (disorder),n,via Query Table +113001000000102,Secondary diabetes mellitus without complication (disorder),n,via Query Table +306951000000104,Did not complete diabetes structured education programme ,n,via Query Table +237626009,Pregnancy and insulin-dependent diabetes mellitus (disorder),n,via Query Table +374771000000108,Excluded from screening - declined - diabetic retinopathy screening administration ,n,via Query Table +190333000,Diabetes mellitus with ketoacidotic coma (disorder),n,via Query Table +190350003,"Diabetes mellitus, juvenile type, with neurological manifestation (disorder)",n,via Query Table +215141000000104,Diabetic monitoring - higher risk albumin excretion,n,via Query Table +213991000000107,Type 1 diabetes mellitus with gastroparesis,n,via Query Table +174721000000100,Transition of diabetes care options discussed,n,via Query Table +276081000000106,Insulin dose changed,n,via Query Table +276071000000109,Insulin dose changed (regime/therapy),n,via Query Table +213591000000103,Insulin needles changed daily,n,via Query Table +190343002,Diabetes mellitus with ophthalmic manifestation (disorder),n,via Query Table +213281000000102,Insulin therapy declined,n,via Query Table +190335007,"Diabetes mellitus, adult onset, with ketoacidotic coma (disorder)",n,via Query Table +190385003,Type II diabetes mellitus with renal complications (disorder),n,via Query Table +190405001,Malnutrition-related diabetes mellitus with coma (disorder),n,via Query Table +720968007,Hyperglycemia self management plan (qualifier value),n,via Query Table +183585000,"Refer, diabetic liaison nurse (procedure)",n,via Query Table +976371000000107,Diabetic on insulin and glucagon-like peptide 1 ,n,via Query Table +374651000000108,Excluded from screening - deceased - diabetic retinopathy screening administration ,n,via Query Table +55692006,Diabetes with hyperosmolar coma (disorder),n,via Query Table +367021000000106,Diabetic foot screen ,n,via Query Table +214791000000107,Insulin needles changed less than once a day,n,via Query Table +190359002,NIDDM with peripheral circulatory disorder (disorder),n,via Query Table +888201000000109,Type I diabetes mellitus in remission ,n,via Query Table +112981000000103,Type A insulin resistance without complication (disorder),n,via Query Table +190391001,Type II diabetes mellitus with retinopathy (disorder),n,via Query Table +89971000000101,Excepted from diabetes quality indicators: Patient unsuitable (administrative concept),n,via Query Table +207181000000101,Referral to multidisciplinary diabetic clinic,n,via Query Table +345061000000100,Initiation of insulin ,n,via Query Table +214001000000102,Type 2 diabetes mellitus with gastroparesis,n,via Query Table +890821000000102,Diabetic monitoring,n,via Query Table +187901000000108,Diabetic retinopathy screening offered,n,via Query Table +190341000000105,O/E - sight threatening diabetic retinopathy,n,via Query Table +371054002,Type I diabetes mellitus with complication (disorder),n,via Query Table +190392008,Type II diabetes mellitus - poor control (disorder),n,via Query Table +171771000000103,Diabetes resolved,n,via Query Table +781171000000100,Referral to diabetes education and self management for ongoing and newly diagnosed structured education programme declined ,n,via Query Table +250571000000104,Diabetic digital retinopathy screening offered ,n,via Query Table +215131000000108,Diabetic monitoring - higher risk albumin excretion,n,via Query Table +207022008,[D]Gangrene of toe in diabetic (situation),n,via Query Table +422297002,Polyneuropathy associated with type I diabetes mellitus (disorder),n,via Query Table +314370005,Type II diabetes mellitus with mononeuropathy (disorder),n,via Query Table +698360004,Diabetes self management plan (qualifier value),n,via Query Table +421223006,"Gestational diabetes mellitus, class F (disorder)",n,via Query Table +762821000000103,Did not attend diabetes foot screening ,n,via Query Table +367031000000108,Diabetic foot screen ,n,via Query Table +491131000000108,Ineligible for diabetic retinopathy screening ,n,via Query Table +918901000000109,Conversion to non insulin injectable ,n,via Query Table +990681000000107,Not suitable for DESMOND (Diabetes Education and Self Management for Ongoing and Newly Diagnosed) programme,n,via Query Table +422155003,"Gestational diabetes mellitus, class B (disorder)",n,via Query Table +307161000000101,Did not attend dose adjustment for normal eating diabetes structured education programme ,n,via Query Table +425442003,Diabetic autonomic neuropathy associated with type 1 diabetes mellitus (disorder),n,via Query Table +214821000000102,Did not attend diabetic retinopathy clinic,n,via Query Table +720702003,Hyperglycemia clinical management plan (qualifier value),n,via Query Table +306511000000107,Diabetes education and self management for ongoing and newly diagnosed structured programme completed ,n,via Query Table +923371000000104,Diabetes foot care education ,n,via Query Table +190339001,"Diabetes mellitus, juvenile type, with renal manifestation (disorder)",n,via Query Table +300501000000108,Diabetes structured education programme completed (situation),n,via Query Table +250931000000108,Referral for diabetic retinopathy screening ,n,via Query Table +314772004,Type II diabetes mellitus with hypoglycemic coma (disorder),n,via Query Table +314377008,Type I diabetes mellitus with nephropathy (disorder),n,via Query Table +335631000000104,Latent autoimmune diabetes mellitus in adult (disorder),n,via Query Table +861501000000101,Diabetic foot screening invitation ,n,via Query Table +215111000000100,Diabetic monitoring - lower risk albumin excretion,n,via Query Table +1025331000000106,Referred to National Health Service Prevention Programme ,n,via Query Table +314378003,Type II diabetes mellitus with nephropathy (disorder),n,via Query Table +175511000000103,Family/carer attended diabetes structured education programme,n,via Query Table +334721000000106,Referral to diabetes special interest general practitioner ,n,via Query Table +314894004,Type I diabetes mellitus with neuropathic arthropathy (disorder),n,via Query Table +306421000000102,Attended expert patient education versus routine treatment structured diabetes programme ,n,via Query Table +928861000000107,Enquiry about diabetic erectile dysfunction declined ,n,via Query Table +659291000000108,Diabetes with other complications (disorder),n,via Query Table +762741000000103,Diabetic monitoring - injection sites abnormal (finding),n,via Query Table +888211000000106,Type II diabetes mellitus in remission (disorder),n,via Query Table +171971000000100,O/E - left chronic diabetic foot ulcer,n,via Query Table +198101000000107,Diabetic monitoring - injection site check declined (finding),n,via Query Table +752141000000107,Diabetes monitoring invitation by short message service text messaging (procedure),n,via Query Table +188931000000103,Diabetic patient unsuitable for digital retinal photography,n,via Query Table +416135000,Patient held diabetic record declined (finding),n,via Query Table +888191000000107,Type I diabetes mellitus in remission (disorder),n,via Query Table +279301000000108,Diabetes type 1 review ,n,via Query Table +478671000000103,[X]Malnutrition-related diabetes mellitus with other specified complications (disorder),n,via Query Table +759421000000101,Pre-conception advice for diabetes mellitus,n,via Query Table +122961000000101,Secondary pancreatic diabetes mellitus without complication (disorder),n,via Query Table +198111000000109,Diabetic monitoring - injection site not checked (finding),n,via Query Table +306751000000101,Referral to diabetes education and self management for ongoing and newly diagnosed diabetes structured programme ,n,via Query Table +593731000000102,Diabetes mellitus NOS with peripheral circulatory disorder (disorder),n,via Query Table +171861000000101,O/E - left eye stable treated proliferative diabetic retinopathy,n,via Query Table +707351000000101,Discharged from diabetes shared care programme,n,via Query Table +593711000000105,Diabetes mellitus NOS with ophthalmic manifestation (disorder),n,via Query Table +3341000000108,Diabetes monitoring admin. (administrative concept),n,via Query Table +300511000000105,Completed diabetes structured education programme ,n,via Query Table +207941000000107,Patient consent given for addition to diabetic register,n,via Query Table +307041000000103,Did not complete expert patient education versus routine treatment diabetes structured education programme ,n,via Query Table +374881000000101,Excluded from screening - physical disability - diabetic retinopathy screening administration ,n,via Query Table +965981000000106,Diabetic on non-insulin injectable medication (finding),n,via Query Table +420989005,"Gestational diabetes mellitus, class R (disorder)",n,via Query Table +976351000000103,Diabetic on oral treatment and glucagon-like peptide 1 ,n,via Query Table +190390000,Type II diabetes mellitus with gangrene (disorder),n,via Query Table +1033291000000103,X-PERT (expert patient education versus routine treatment) First Steps diabetes self-management programme completed ,n,via Query Table +170758002,Feet examination (regime/therapy),n,via Query Table +359638003,Non-insulin dependent diabetes mellitus in nonobese (disorder),n,via Query Table +968071000000103,Diabetic injection administration education ,n,via Query Table +344661000000107,Insulin initiation - enhanced services administration ,n,via Query Table +1051101000000103,Pregnancy and insulin-dependent diabetes mellitus,n,via Query Table +486761000000108,Impaired vision due to diabetic retinopathy ,n,via Query Table +724997001,Lumbosacral plexopathy co-occurrent and due to diabetes mellitus (disorder),n,via Query Table +704471000000107,Diabetes care by hospital only (finding),n,via Query Table +567641000000108,Haemoglobin A1C - diabetic control NOS (observable entity),n,via Query Table +620661000000106,Diabetic retinopathy NOS (disorder),n,via Query Table +1541000119106,Skin ulcer associated with type II diabetes mellitus (disorder),n,via Query Table +1090051000000100,Skin ulcer associated with diabetes mellitus (disorder),n,via Query Table +213771000000105,Diabetic 6 month review,n,via Query Table +190355008,"Diabetes mellitus, juvenile type, with peripheral circulatory disorder (disorder)",n,via Query Table +776351000000108,Diabetic erectile dysfunction review (regime/therapy),n,via Query Table +314887002,Type I diabetes mellitus with diabetic cataract (disorder),n,via Query Table +306791000000109,Referral to expert patient education versus routine treatment diabetes structured education programme ,n,via Query Table +857931000000101,Provision of written information about diabetes and driving ,n,via Query Table +374791000000107,Excluded from screening - no current contact details - diabetic retinopathy screening administration ,n,via Query Table +174961000000105,Referral to diabetes structured education programme,n,via Query Table +860991000000108,Referral to dose adjustment for normal eating diabetes structured education programme declined ,n,via Query Table +279331000000102,Diabetes type 2 review ,n,via Query Table +374861000000105,Excluded from screening - learning or mental disability - diabetic retinopathy screening administration ,n,via Query Table +307221000000100,Did not attend expert patient education versus routine treatment diabetes structured education programme ,n,via Query Table +927831000000103,Discharge from diabetic service ,n,via Query Table +856331000000102,O/E - Right diabetic foot at increased risk,n,via Query Table +188451000000102,Patient held diabetic record declined,n,via Query Table +190334006,"Diabetes mellitus, juvenile type, with ketoacidotic coma (disorder)",n,via Query Table +170311000000102,Referral to diabetes structured education programme,n,via Query Table +190332005,Diabetes mellitus NOS with hyperosmolar coma (disorder),n,via Query Table +338041000000109,Maternally inherited diabetes mellitus,n,via Query Table +374851000000107,Excluded from screening - learning or mental disability - diabetic retinopathy screening administration ,n,via Query Table +759411000000107,Pre-conception advice for diabetes mellitus (procedure),n,via Query Table +192431000000107,Diabetic patient unsuitable for digital retinal photography,n,via Query Table +190371008,Type I diabetes mellitus - poor control (disorder),n,via Query Table +175501000000100,Attended diabetes structured education programme,n,via Query Table +190363009,Type I diabetes mellitus with renal complications (disorder),n,via Query Table +307181000000105,Did not attend diabetes education and self management for ongoing and newly diagnosed structured programme ,n,via Query Table +306601000000109,Diabetes structured education programme declined ,n,via Query Table +414892004,On examination - clinically significant macular edema of left eye (disorder),n,via Query Table +956791000000109,Joint consultation with practice nurse and community diabetes specialist nurse ,n,via Query Table +276671000000103,Attended DESMOND diabetes structured education programme ,n,via Query Table +306551000000106,Expert patient education versus routine treatment diabetes structured education programme completed ,n,via Query Table +1046201000000104,Hypoglycaemic attack - attendance by ambulance crew ,n,via Query Table +423263001,Diabetic autonomic neuropathy associated with type 2 diabetes mellitus (disorder),n,via Query Table +300131000000107,Diabetes mellitus type II diet education (procedure),n,via Query Table +421443003,"Gestational diabetes mellitus, class D (disorder)",n,via Query Table +698971000000101,"Diabetes mellitus during pregnancy, childbirth or the puerperium NOS (disorder)",n,via Query Table +306881000000103,Did not attend diabetes structured education programme ,n,via Query Table +425159004,Diabetic gastroparesis associated with type 1 diabetes mellitus (disorder),n,via Query Table +401109007,Type 1 diabetes mellitus with persistent proteinuria (disorder),n,via Query Table +876371000000102,Conversion to insulin in secondary care ,n,via Query Table +213781000000107,Diabetic 6 month review,n,via Query Table +497741000000106,[D]Widespread diabetic foot gangrene (situation),n,via Query Table +276091000000108,Insulin dose changed,n,via Query Table +230578003,Diabetic truncal radiculopathy (disorder),n,via Query Table +191781000000105,Discharged from care of diabetes specialist nurse,n,via Query Table +310312000,HbA1 greater than 10% - bad control (finding),n,via Query Table +841231000000100,Referral to community diabetes specialist clinic ,n,via Query Table +421165007,Diabetic oculopathy associated with type I diabetes mellitus (disorder),n,via Query Table diff --git a/codelists/opensafely-ethnicity-snomed-0removed.csv b/codelists/opensafely-ethnicity-snomed-0removed.csv new file mode 100644 index 0000000..01155b2 --- /dev/null +++ b/codelists/opensafely-ethnicity-snomed-0removed.csv @@ -0,0 +1,600 @@ +snomedcode,Ethnicity,Grouping_16,Grouping_6 +10292001,Guamians,16,5 +108342005,South Asian AND/OR Australian aborigine,16,5 +113170005,Aymara,16,5 +113171009,Coushatta,16,5 +13233008,Flathead,16,5 +154182006,Other ethnic non-mixed (NMO),16,5 +154183001,Brit. ethnic minor. spec.(NMO),16,5 +154184007,Brit. ethnic minor. unsp (NMO),16,5 +154186009,N African Arab &/or Iranian (NMO),16,5 +154195001,Other ethnic NEC (NMO),16,5 +154203007,Vietnamese,16,5 +154209006,Other ethnic group,16,5 +154212009,New Zealand ethnic groups,16,5 +154215006,New Zealand Maori,16,5 +154216007,Samoan,16,5 +154217003,Cook Island Maori,16,5 +154218008,Tongan,16,5 +154219000,Niuean,16,5 +154220006,Tokelauan,16,5 +154221005,Fijian,16,5 +154222003,Other Pacific ethnic group,16,5 +154227009,Other New Zealand ethnic group,16,5 +154229007,New Zealand ethnic group NOS,16,5 +15801006,Kapingas,16,5 +17789004,Papuans,16,5 +18575005,Oceanian,16,5 +186005001,Other ethnic non-mixed (NMO),16,5 +186006000,British ethnic minority specified (NMO),16,5 +186007009,British ethnic minority unspecified (NMO),16,5 +186009007,N African Arab &/or Iranian (NMO),16,5 +186018009,Other ethnic NEC (NMO),16,5 +186026001,Vietnamese,16,5 +186032006,Other ethnic group,16,5 +186035008,New Zealand ethnic groups,16,5 +186037000,Other European in New Zealand,16,5 +186039002,New Zealand Maori,16,5 +186040000,Cook Island Maori,16,5 +186041001,Niuean,16,5 +186042008,Tokelauan,16,5 +186043003,Other Pacific ethnic group,16,5 +186047002,Other New Zealand ethnic group,16,5 +186048007,New Zealand ethnic group NOS,16,5 +18664001,Xavante,16,5 +19085009,Saipanese,16,5 +20140003,Hawaiians,16,5 +20291009,Lacandon,16,5 +21047009,Aleuts,16,5 +22007004,Shoshone,16,5 +23517005,Polynesians,16,5 +23534002,Melanesians,16,5 +25750005,Admiralty Islanders,16,5 +270464009,N African Arab/Iranian (NMO),16,5 +27301002,Paez,16,5 +275594002,North African Arab (NMO),16,5 +275595001,Iranian (NMO),16,5 +27700004,Iraqi,16,5 +28821007,Easter Islanders,16,5 +296841000000102,Yemeni,16,5 +312859007,Vietnamese,16,5 +315282008,Other ethnic group,16,5 +32873005,Bloods,16,5 +33182009,Trukese,16,5 +3353005,Pueblo,16,5 +34334001,New Caledonians,16,5 +35007000,Utes,16,5 +3698008,Micronesians,16,5 +38144004,Athabascans,16,5 +38361009,Koreans,16,5 +38750003,Bororo,16,5 +4073004,Palauans,16,5 +413569000,Arab,16,5 +414661004,Melanesian,16,5 +41798002,Caroline Islanders,16,5 +43056000,Cuna,16,5 +43608005,Australian Aborigines,16,5 +43890005,Dieguenos,16,5 +47327008,Mexican Indians,16,5 +48118002,Yapese,16,5 +48294008,Solomon Islanders,16,5 +48375000,Seminole,16,5 +49202008,Gilbertese,16,5 +50405005,Senoi,16,5 +55990000,Inca,16,5 +57539009,Navaho,16,5 +583481000000105,Other ethnic NEC (NMO),16,5 +592491000000104,Other New Zealand ethnic group,16,5 +592501000000105,New Zealand ethnic group NOS,16,5 +59487007,Syrians,16,5 +59597001,Marshallese,16,5 +60157000,Ellice Islanders,16,5 +62598008,Venezuelan Indians,16,5 +63457007,Maya,16,5 +6373008,Choco,16,5 +63732001,New Hebrideans,16,5 +65776006,Blackfeet,16,5 +661731000000107,Other Pacific ethnic group,16,5 +66406004,Huasteco,16,5 +666871000000107,Other ethnic group,16,5 +66920001,Amerind,16,5 +67931002,Aztec,16,5 +69865008,Fijian,16,5 +69983001,Irani,16,5 +71949006,Chippewa,16,5 +72337002,Brazilian Indians,16,5 +73524008,Caingang,16,5 +73736004,Maori,16,5 +74159009,Melanuans,16,5 +74302004,Apache,16,5 +75301003,Mapuche,16,5 +75326007,Labradors,16,5 +75704009,Toba,16,5 +76460008,Yanomama,16,5 +76883002,Huichol,16,5 +77502007,Atacamenos,16,5 +77686000,Kwakiutl,16,5 +79434006,Quechua,16,5 +81560001,Tongan,16,5 +81653003,Pehuenches,16,5 +85515006,Eskimo,16,5 +86275006,Samoan,16,5 +87323008,Nez Percé,16,5 +89001000000105,Arab - ethnic category 2001 census,16,5 +89011000000107,Iranian - ethnic category 2001 census,16,5 +89021000000101,South and Central American - ethnic category 2001 census,16,5 +89026003,Alacaluf,16,5 +90027003,Arabs,16,5 +91488008,New Britons,16,5 +92521000000101,Other - ethnic category 2001 census,16,5 +94071000000100,"Middle Eastern (excluding Israeli, Iranian and Arab) - ethnic category 2001 census",16,5 +94081000000103,Israeli - ethnic category 2001 census,16,5 +94091000000101,Kurdish - ethnic category 2001 census,16,5 +94101000000109,Moroccan - ethnic category 2001 census,16,5 +94111000000106,Latin American - ethnic category 2001 census,16,5 +94121000000100,Multi-ethnic islands: Mauritian or Seychellois or Maldivian or St Helena - ethnic category 2001 census,16,5 +94151000000105,Any other group - ethnic category 2001 census,16,5 +976951000000102,Other ethnic group: Arab - England and Wales ethnic category 2011 census,16,5 +976961000000104,Other ethnic group: Arab - England and Wales ethnic category 2011 census,16,5 +976971000000106,Other ethnic group: any other ethnic group - England and Wales ethnic category 2011 census,16,5 +976981000000108,Other ethnic group: any other ethnic group - England and Wales ethnic category 2011 census,16,5 +977851000000109,Other ethnic group: Arab - Northern Ireland ethnic category 2011 census,16,5 +977861000000107,Other ethnic group: Arab - Northern Ireland ethnic category 2011 census,16,5 +977871000000100,Other ethnic group: any other ethnic group - Northern Ireland ethnic category 2011 census,16,5 +977881000000103,Other ethnic group: any other ethnic group - Northern Ireland ethnic category 2011 census,16,5 +978381000000105,"Other ethnic group: Arab, Arab Scottish or Arab British - Scotland ethnic category 2011 census",16,5 +978391000000107,"Other ethnic group: Arab, Arab Scottish or Arab British - Scotland ethnic category 2011 census",16,5 +978401000000105,Other ethnic group: any other ethnic group - Scotland ethnic category 2011 census,16,5 +978411000000107,Other ethnic group: any other ethnic group - Scotland ethnic category 2011 census,16,5 +154181004,Chinese,15,5 +154224002,Chinese,15,5 +186004002,Chinese,15,5 +33897005,Chinese,15,5 +92511000000107,Chinese - ethnic category 2001 census,15,5 +976851000000107,Asian or Asian British: Chinese - England and Wales ethnic category 2011 census,15,5 +977751000000101,Asian or Asian British: Chinese - Northern Ireland ethnic category 2011 census,15,5 +978191000000109,Asian or Asian Scottish or Asian British: Chinese - Scotland ethnic category 2011 census,15,5 +976861000000105,Asian or Asian British: Chinese - England and Wales ethnic category 2011 census,15,5 +977761000000103,Asian or Asian British: Chinese - Northern Ireland ethnic category 2011 census,15,5 +978201000000106,Asian or Asian Scottish or Asian British: Chinese - Scotland ethnic category 2011 census,15,5 +110791000000100,Black British - ethnic category 2001 census,14,4 +15086000,African American,14,4 +154166005,"Black, other, non-mixed origin",14,4 +154167001,Black British,14,4 +154169003,Black N African &/or Arab &/or Iranian,14,4 +154171003,Black E Afric Asia &/or Indo-Caribb,14,4 +154172005,Black Indian sub-continent,14,4 +154173000,Black - other Asian,14,4 +154174006,Black Black - other,14,4 +154206004,Other black ethnic group,14,4 +185989004,"Black, other, non-mixed origin",14,4 +185990008,Black British,14,4 +185992000,Black N African &/or Arab &/or Iranian,14,4 +185994004,Black E Afric Asia &/or Indo-Caribb,14,4 +185995003,Black Indian sub-continent,14,4 +185996002,Black - other Asian,14,4 +185997006,Black Black - other,14,4 +186029008,Other black ethnic group,14,4 +270461001,Black N African/Arab/Iranian,14,4 +270462008,Black East African Asian/Indo-Caribbean,14,4 +275587000,Black Arab,14,4 +275588005,Black Iranian,14,4 +275589002,Black East African Asian,14,4 +275590006,Black Indo-Caribbean,14,4 +315240009,Black - ethnic group,14,4 +315279003,Other black ethnic group,14,4 +651601000000100,Black Black - other,14,4 +92501000000105,Other Black background - ethnic category 2001 census,14,4 +92741000000104,Other Black or Black unspecified - ethnic category 2001 census,14,4 +976931000000109,Black or African or Caribbean or Black British: other Black or African or Caribbean background - England and Wales ethnic category 2011 census,14,4 +977831000000102,Black or African or Caribbean or Black British: other Black or African or Caribbean background - Northern Ireland ethnic category 2011 census,14,4 +978271000000103,"Caribbean or Black: Caribbean, Caribbean Scottish or Caribbean British - Scotland ethnic category 2011 census",14,4 +978341000000102,"Caribbean or Black: Black, Black Scottish or Black British - Scotland ethnic category 2011 census",14,4 +978361000000101,Caribbean or Black: any other Black or Caribbean group - Scotland ethnic category 2011 census,14,4 +976941000000100,Black or African or Caribbean or Black British : other black or African or Caribbean background - England and Wales ethnic category 2011 census,14,4 +978371000000108,Caribbean or Black: any other Black or Caribbean group - Scotland ethnic category 2011 census,14,4 +977841000000106,Black or African or Caribbean or Black British: other black or African or Caribbean background - Northern Ireland ethnic category 2011 census,14,4 +978351000000104,Caribbean or Black: Black Black Scottish or Black British - Scotland ethnic category 2011 census,14,4 +521000220104,Black Irish (ethnic group),14,4 +10008004,Ewe,13,4 +11794009,Kenyans,13,4 +13440006,Tanganyikans,13,4 +14470009,Tutsi,13,4 +154165009,Black African,13,4 +154170002,Black - other African country,13,4 +154187000,Other African countries (NMO),13,4 +18167009,Black African,13,4 +185993005,Black - other African country,13,4 +186010002,Other African countries (NMO),13,4 +1919006,Egyptians,13,4 +21868006,Madagascans,13,4 +23922002,Batutsi,13,4 +2720008,Hututu,13,4 +275586009,Black North African,13,4 +37474002,Ghanaians,13,4 +37843006,Fulani,13,4 +3818007,Senegalese,13,4 +39764005,Bantu,13,4 +41076003,Mozambiquans,13,4 +46110004,Somalis,13,4 +51750002,Hottentot,13,4 +52075006,Congolese,13,4 +58047002,Barundi,13,4 +59366001,Ibo,13,4 +67439005,Msutu,13,4 +71176007,Pygmies,13,4 +72201005,Hobe,13,4 +72248007,Kikuyu,13,4 +76253004,Zulu,13,4 +76775001,Ugandans,13,4 +80528001,Xosa,13,4 +8124001,West Africans,13,4 +82174001,Shona,13,4 +83584002,Luo,13,4 +85371009,Bushmen,13,4 +870448005,Khoikhoi,13,4 +88790004,Abyssinians (Amharas),13,4 +88839008,Sudanese,13,4 +88934004,Nigerians,13,4 +90822005,Gambians,13,4 +9158000,Liberians,13,4 +92491000000104,African - ethnic category 2001 census,13,4 +92711000000100,Somali - ethnic category 2001 census,13,4 +92731000000108,Nigerian - ethnic category 2001 census,13,4 +94061000000107,North African - ethnic category 2001 census,13,4 +976891000000104,Black or African or Caribbean or Black British: African - England and Wales ethnic category 2011 census,13,4 +977791000000109,Black or African or Caribbean or Black British: African - Northern Ireland ethnic category 2011 census,13,4 +978231000000100,"African: African, African Scottish or African British - Scotland ethnic category 2011 census",13,4 +978251000000107,African: any other African - Scotland ethnic category 2011 census,13,4 +978241000000109,African: African African Scottish or African British - Scotland ethnic category 2011 census,13,4 +976901000000103,Black or African or Caribbean or Black British: African - England and Wales ethnic category 2011 census,13,4 +977801000000108,Black or African or Caribbean or Black British: African - Northern Ireland ethnic category 2011 census,13,4 +978261000000105,African: any other African - Scotland ethnic category 2011 census,13,4 +107691000000105,Caribbean - ethnic category 2001 census,12,4 +154164008,Black Caribbean,12,4 +154168006,Black Caribbean &/or W.I. &/or Guyana,12,4 +154185008,Caribbean I. &/or W.I. &/or Guyana (NMO),12,4 +160531006,Race: West indian,12,4 +185988007,Black Caribbean,12,4 +185991007,Black Caribbean &/or W.I. &/or Guyana,12,4 +186008004,Caribbean I. &/or W.I. &/or Guyana (NMO),12,4 +270460000,Black Caribbean/West India/Guyana,12,4 +270463003,Caribbean I./W.I./Guyana (NMO),12,4 +275591005,Caribbean Island (NMO),12,4 +275592003,West Indian (NMO),12,4 +275593008,Guyana (NMO),12,4 +309643000,Black West Indian,12,4 +309644006,Black Guyana,12,4 +413465009,Afro-Caribbean,12,4 +976911000000101,Black or African or Caribbean or Black British: Caribbean - England and Wales ethnic category 2011 census,12,4 +977811000000105,Black or African or Caribbean or Black British: Caribbean - Northern Ireland ethnic category 2011 census,12,4 +976921000000107,Black or African or Caribbean or Black British : Caribbean - England and Wales ethnic category 2011 census (finding),12,4 +977821000000104,Black or African or Caribbean or Black British: Caribbean - Northern Ireland ethnic category 2011 census,12,4 +978281000000101,Caribbean or Black: Caribbean Caribbean Scottish or Caribbean British - Scotland ethnic category 2011 census,12,4 +10432001,Onge,11,3 +110781000000102,Sinhalese - ethnic category 2001 census,11,3 +12556008,Tamils,11,3 +1340002,Malays,11,3 +154188005,E Afric Asian &/or Indo-Carib (NMO),11,3 +154190006,Other Asian (NMO),11,3 +154207008,Other Asian ethnic group,11,3 +154223008,South East Asian,11,3 +154226000,Other Asian,11,3 +186011003,E Afric Asian &/or Indo-Carib (NMO),11,3 +186013000,Other Asian (NMO),11,3 +186030003,Other Asian ethnic group,11,3 +186044009,South East Asian,11,3 +186046006,Other Asian,11,3 +20449009,Javanese,11,3 +21993009,Indonesians,11,3 +24812003,Mongol,11,3 +26215007,South Asian Aborigine,11,3 +2688009,Tristan da Cunhans,11,3 +270465005,E Afric Asian/Indo-Carib (NMO),11,3 +275596000,East African Asian (NMO),11,3 +275597009,Indo-Caribbean (NMO),11,3 +27683006,Ainu,11,3 +2852001,Bhutanese,11,3 +28796001,Siamese,11,3 +315280000,Asian - ethnic group,11,3 +315281001,Other Asian ethnic group,11,3 +32513008,Dyaks,11,3 +40165009,Buriats,11,3 +414551003,Japanese,11,3 +414978006,Oriental,11,3 +42632009,Andamanese,11,3 +4299001,Marathas,11,3 +44460002,Turks,11,3 +46723002,Badagas,11,3 +47250000,Bruneians,11,3 +48679001,Bogobos,11,3 +53195006,Kirghiz,11,3 +57405008,Chenchu,11,3 +63736003,Taiwanese,11,3 +661741000000103,Other Asian,11,3 +67165000,Lapps,11,3 +704385002,Punjabi,11,3 +704386001,Orang asli,11,3 +704387005,Kadazan,11,3 +704388000,Melanau,11,3 +704389008,Murut,11,3 +704390004,Bajau,11,3 +704391000,Bidayuh,11,3 +704392007,Iban,11,3 +718131000000106,Nepali,11,3 +76768002,Filipinos,11,3 +81283004,Todas,11,3 +81846005,Naiars,11,3 +83365001,Thais,11,3 +83939006,Irula,11,3 +86461000000107,Sri Lankan - ethnic category 2001 census,11,3 +90348007,Ghashgai,11,3 +91066000,Tatars,11,3 +91191002,Oraons,11,3 +92481000000101,Other Asian background - ethnic category 2001 census,11,3 +92651000000105,Kashmiri - ethnic category 2001 census,11,3 +92661000000108,East African Asian - ethnic category 2001 census,11,3 +92671000000101,Tamil - ethnic category 2001 census,11,3 +92681000000104,British Asian - ethnic category 2001 census,11,3 +92691000000102,Caribbean Asian - ethnic category 2001 census,11,3 +92701000000102,Other Asian or Asian unspecified - ethnic category 2001 census,11,3 +92751000000101,Vietnamese - ethnic category 2001 census,11,3 +92761000000103,Japanese - ethnic category 2001 census,11,3 +92771000000105,Filipino - ethnic category 2001 census,11,3 +92781000000107,Malaysian - ethnic category 2001 census,11,3 +976871000000103,Asian or Asian British: any other Asian background - England and Wales ethnic category 2011 census,11,3 +977771000000105,Asian or Asian British: any other Asian background - Northern Ireland ethnic category 2011 census,11,3 +978211000000108,Asian or Asian Scottish or Asian British: any other Asian group - Scotland ethnic category 2011 census,11,3 +976881000000101,Asian or Asian British: any other Asian background - England and Wales ethnic category 2011 census,11,3 +977781000000107,Asian or Asian British: any other Asian background - Northern Ireland ethnic category 2011 census,11,3 +978221000000102,Asian or Asian Scottish or Asian British: any other Asian group - Scotland ethnic category 2011 census,11,3 +154180003,Bangladeshi,10,3 +186003008,Bangladeshi,10,3 +92471000000103,Bangladeshi or British Bangladeshi - ethnic category 2001 census,10,3 +976831000000100,Asian or Asian British: Bangladeshi - England and Wales ethnic category 2011 census,10,3 +977731000000108,Asian or Asian British: Bangladeshi - Northern Ireland ethnic category 2011 census,10,3 +978171000000105,"Asian or Asian Scottish or Asian British: Bangladeshi, Bangladeshi Scottish or Bangladeshi British - Scotland ethnic category 2011 census",10,3 +976841000000109,Asian or Asian British: Bangladeshi - England and Wales ethnic category 2011 census,10,3 +977741000000104,Asian or Asian British: Bangladeshi - Northern Ireland ethnic category 2011 census,10,3 +978181000000107,Asian or Asian Scottish or Asian British: Bangladeshi Bangladeshi Scottish or Banagaldeshi British - Scotland ethnic category 2011 census,10,3 +154179001,Pakistani,9,3 +186002003,Pakistani,9,3 +81035008,Pakistani (Urduspeakers),9,3 +92461000000105,Pakistani or British Pakistani - ethnic category 2001 census,9,3 +976811000000108,Asian or Asian British: Pakistani - England and Wales ethnic category 2011 census,9,3 +977711000000100,Asian or Asian British: Pakistani - Northern Ireland ethnic category 2011 census,9,3 +978071000000106,"Asian or Asian Scottish or Asian British: Pakistani, Pakistani Scottish or Pakistani British - Scotland ethnic category 2011 census",9,3 +978081000000108,Asian or Asian Scottish or Asian British: Pakistani Pakistani Scottish or Pakistani British - Scotland ethnic category 2011 census,9,3 +976821000000102,Asian or Asian British: Pakistani - England and Wales ethnic category 2011 census,9,3 +977721000000106,Asian or Asian British: Pakistani - Northern Ireland ethnic category 2011 census,9,3 +110751000000108,Indian or British Indian - ethnic category 2001 census,8,3 +154178009,Indian,8,3 +154189002,Indian sub-continent (NMO),8,3 +154225001,Indian,8,3 +186001005,Indian (East Indian),8,3 +186012005,Indian sub-continent (NMO),8,3 +186045005,Indian,8,3 +64483007,Indians (Hindi-speaking),8,3 +92641000000107,Punjabi - ethnic category 2001 census,8,3 +976791000000107,Asian or Asian British: Indian - England and Wales ethnic category 2011 census,8,3 +977591000000103,Asian or Asian British: Indian - Northern Ireland ethnic category 2011 census,8,3 +978111000000100,"Asian or Asian Scottish or Asian British: Indian, Indian Scottish or Indian British - Scotland ethnic category 2011 census",8,3 +977601000000109,Asian or Asian British: Indian - Northern Ireland ethnic category 2011 census,8,3 +976801000000106,Asian or Asian British: Indian - England and Wales ethnic category 2011 census,8,3 +978121000000106,Asian or Asian Scottish or Asian British: Indian Indian Scottish or Indian British - Scotland ethnic category 2011 census,8,3 +414481008,Indian (racial group),8,3 +110771000000104,Black and White - ethnic category 2001 census,7,2 +154175007,"Black - other, mixed",7,2 +154176008,Other Black - Black/White orig,7,2 +154177004,Other Black - Black/Asian orig,7,2 +154196000,"Other ethnic, mixed origin",7,2 +154197009,"Other ethnic, Black/White orig",7,2 +154199007,"Other ethnic, mixed white orig",7,2 +154200005,"Other ethnic, other mixed orig",7,2 +185998001,"Black - other, mixed",7,2 +185999009,Other Black - Black/White orig,7,2 +186000006,Other Black - Black/Asian orig,7,2 +186019001,"Other ethnic, mixed origin",7,2 +186022004,"Other ethnic, mixed white origin",7,2 +186023009,"Other ethnic, other mixed origin",7,2 +315239007,Mixed ethnic census group,7,2 +92451000000107,Other Mixed background - ethnic category 2001 census,7,2 +92581000000100,Black and Asian - ethnic category 2001 census,7,2 +92591000000103,Black and Chinese - ethnic category 2001 census,7,2 +92601000000109,Chinese and White - ethnic category 2001 census,7,2 +92611000000106,Asian and Chinese - ethnic category 2001 census,7,2 +92621000000100,Other Mixed or Mixed unspecified - ethnic category 2001 census,7,2 +92631000000103,Mixed Asian - ethnic category 2001 census,7,2 +92721000000106,Mixed Black - ethnic category 2001 census,7,2 +976771000000108,Mixed multiple ethnic groups: any other Mixed or multiple ethnic background - England and Wales ethnic category 2011 census,7,2 +976781000000105,Mixed multiple ethnic groups: any other Mixed or Multiple ethnic background - England and Wales ethnic category 2011 census,7,2 +977551000000106,Mixed multiple ethnic groups: any other Mixed or multiple ethnic background - Northern Ireland ethnic category 2011 census,7,2 +977561000000109,Mixed multiple ethnic groups: any other Mixed or Multiple ethnic background - Northern Ireland ethnic category 2011 census,7,2 +978051000000102,Mixed or multiple ethnic groups: any Mixed or multiple ethnic group - Scotland ethnic category 2011 census,7,2 +978061000000104,Mixed or multiple ethnic groups: any Mixed or Multiple ethnic group - Scotland ethnic category 2011 census,7,2 +414752008,Mixed racial group (racial group),7,2 +154198004,"Other ethnic, Asian/White orig",6,2 +186021006,"Other ethnic, Asian/White origin",6,2 +92441000000109,White and Asian - ethnic category 2001 census,6,2 +976751000000104,Mixed multiple ethnic groups: White and Asian - England and Wales ethnic category 2011 census,6,2 +976761000000101,Mixed multiple ethnic groups: white and Asian - England and Wales ethnic category 2011 census,6,2 +977431000000100,Mixed multiple ethnic groups: White and Asian - Northern Ireland ethnic category 2011 census,6,2 +977441000000109,Mixed multiple ethnic groups: white and Asian - Northern Ireland ethnic category 2011 census,6,2 +154202002,Black African and White,5,2 +186025002,Black African and White,5,2 +315635008,Black African and White,5,2 +413466005,Afro-Caucasian,5,2 +92431000000100,White and Black African - ethnic category 2001 census,5,2 +976731000000106,Mixed multiple ethnic groups: White and Black African - England and Wales ethnic category 2011 census,5,2 +976741000000102,Mixed multiple ethnic groups: white and black African - England and Wales ethnic category 2011 census,5,2 +977411000000108,Mixed multiple ethnic groups: White and Black African - Northern Ireland ethnic category 2011 census,5,2 +977421000000102,Mixed multiple ethnic groups: white and black African - Northern Ireland ethnic category 2011 census,5,2 +154201009,Black Caribbean and White,4,2 +186020007,"Other ethnic, Black/White origin",4,2 +186024003,Black Caribbean and White,4,2 +315634007,Black Caribbean and White,4,2 +92421000000102,White and Black Caribbean - ethnic category 2001 census,4,2 +976711000000103,Mixed multiple ethnic groups: White and Black Caribbean - England and Wales ethnic category 2011 census,4,2 +976721000000109,Mixed multiple ethnic groups: white and black Caribbean - England and Wales ethnic category 2011 census,4,2 +977391000000108,Mixed multiple ethnic groups: White and Black Caribbean - Northern Ireland ethnic category 2011 census,4,2 +977401000000106,Mixed multiple ethnic groups: white and black Caribbean - Northern Ireland ethnic category 2011 census,4,2 +10117001,Finns,3,1 +1036211000000103,Slovak Roma,3,1 +1036251000000104,Czech Roma,3,1 +1036281000000105,Hungarian Roma,3,1 +1036301000000106,Polish Roma,3,1 +1036321000000102,Romanian Roma,3,1 +1036341000000109,Roma,3,1 +1036361000000105,Bulgarian Roma,3,1 +110401000000103,Turkish - ethnic category 2001 census,3,1 +113169009,Armenians,3,1 +14045001,Caucasian,3,1 +14176005,Danes,3,1 +1451003,Greeks,3,1 +154163002,Other white ethnic group,3,1 +154192003,Greek &/or Greek Cypriot (NMO),3,1 +154193008,Turkish &/or Turkish Cypriot (NMO),3,1 +154194002,Other European (NMO),3,1 +154208003,Irish traveller,3,1 +154213004,New Zealand European,3,1 +154214005,Other European in New Zealand,3,1 +17095009,Norwegians,3,1 +18583004,Estonians,3,1 +185984009,White - ethnic group,3,1 +185987002,Other white ethnic group,3,1 +186015007,Greek &/or Greek Cypriot (NMO),3,1 +186016008,Turkish &/or Turkish Cypriot (NMO),3,1 +186017004,Other European (NMO),3,1 +186031004,Irish traveller,3,1 +186036009,New Zealand European,3,1 +19434008,French,3,1 +270466006,Greek/Greek Cypriot (NMO),3,1 +270467002,Turkish/Turkish Cypriot (NMO),3,1 +275599007,Greek (NMO),3,1 +275600005,Greek Cypriot (NMO),3,1 +275601009,Turkish (NMO),3,1 +275602002,Turkish Cypriot (NMO),3,1 +28409002,Spaniards,3,1 +28562006,Poles,3,1 +286009,Czech,3,1 +29343004,Bulgarian,3,1 +315238004,Other white ethnic group,3,1 +315283003,Irish traveller,3,1 +31637002,Italians,3,1 +32045009,Georgians,3,1 +36329002,Slovak,3,1 +367505005,Caucasian (living organism),3,1 +393199009,Gypsies,3,1 +394149000,Gypsies,3,1 +394635008,Gypsies,3,1 +40182006,Gypsies,3,1 +414152003,European,3,1 +445343003,Romanian,3,1 +45465003,Basques,3,1 +518701000000103,Romanian,3,1 +518721000000107,Bulgarian,3,1 +519681000000108,Czech,3,1 +53460002,Serbs,3,1 +56056003,Belgians,3,1 +64693008,Hungarian,3,1 +668681000000107,Other white ethnic group,3,1 +68486007,Austrians,3,1 +710011000000101,Slovak,3,1 +718021000000105,Portuguese,3,1 +718958002,Roma,3,1 +718959005,Czech Roma,3,1 +718960000,Romanian Roma,3,1 +718961001,Slovak Roma,3,1 +718962008,Bulgarian Roma,3,1 +718963003,Hungarian Roma,3,1 +718964009,Polish Roma,3,1 +72809004,Icelanders,3,1 +733078003,Ukrainian,3,1 +733446001,Canadian,3,1 +735001008,Scandinavian,3,1 +76574004,Swiss,3,1 +7695005,Germans,3,1 +80208004,Portuguese,3,1 +81403004,Swedes,3,1 +85163001,Russians,3,1 +88911000000101,Irish Traveller - ethnic category 2001 census,3,1 +88921000000107,Traveller - ethnic category 2001 census,3,1 +88931000000109,Gypsy/Romany - ethnic category 2001 census,3,1 +88941000000100,Polish - ethnic category 2001 census,3,1 +88951000000102,Baltic States (Estonian or Latvian or Lithuanian) - ethnic category 2001 census,3,1 +88961000000104,Commonwealth of (Russian) Independent States - ethnic category 2001 census,3,1 +88971000000106,Albanian - ethnic category 2001 census,3,1 +88981000000108,Serbian - ethnic category 2001 census,3,1 +92411000000108,Other White background - ethnic category 2001 census,3,1 +92791000000109,Cypriot (part not stated) - ethnic category 2001 census,3,1 +93921000000101,Ulster Scots - ethnic category 2001 census,3,1 +93931000000104,Greek - ethnic category 2001 census,3,1 +93941000000108,Greek Cypriot - ethnic category 2001 census,3,1 +93951000000106,Turkish Cypriot - ethnic category 2001 census,3,1 +93961000000109,Italian - ethnic category 2001 census,3,1 +93981000000100,Kosovan - ethnic category 2001 census,3,1 +93991000000103,Bosnian - ethnic category 2001 census,3,1 +94001000000108,Croatian - ethnic category 2001 census,3,1 +94011000000105,Other republics which made up the former Yugoslavia - ethnic category 2001 census,3,1 +94021000000104,Mixed Irish and other White - ethnic category 2001 census,3,1 +94031000000102,Other mixed White - ethnic category 2001 census,3,1 +94041000000106,Other White European or European unspecified or Mixed European - ethnic category 2001 census,3,1 +94051000000109,Other White or White unspecified - ethnic category 2001 census,3,1 +9533000,Dutch,3,1 +976671000000104,White: Gypsy or Irish Traveller - England and Wales ethnic category 2011 census,3,1 +976691000000100,White: any other White background - England and Wales ethnic category 2011 census,3,1 +977351000000100,White - Northern Ireland ethnic category 2011 census,3,1 +977371000000109,Irish Traveller - Northern Ireland ethnic category 2011 census,3,1 +977971000000108,White: Gypsy or Irish Traveller - Scotland ethnic category 2011 census,3,1 +978011000000101,White: Polish - Scotland ethnic category 2011 census,3,1 +978031000000109,White: any other White ethnic group - Scotland ethnic category 2011 census,3,1 +978041000000100,White: any other white ethnic group - Scotland ethnic category 2011 census,3,1 +978021000000107,White: Polish - Scotland ethnic category 2011 census,3,1 +413773004,Caucasian (racial group),3,1 +977381000000106,Irish Traveller - Northern Ireland ethnic category 2011 census,3,1 +976701000000100,White: any other white background - England and Wales ethnic category 2011 census,3,1 +977981000000105,White: Gypsy or Irish Traveller - Scotland ethnic category 2011 census,3,1 +976681000000102,White: Gypsy or Irish Traveller - England and Wales ethnic category 2011 census,3,1 +154162007,White Irish,2,1 +154191005,Irish (NMO),2,1 +185986006,White Irish,2,1 +186014006,Irish (NMO),2,1 +315237009,White Irish,2,1 +494161000000100,White Irish - ethnic category 2001 census,2,1 +92401000000106,Irish - ethnic category 2001 census,2,1 +976651000000108,White: Irish - England and Wales ethnic category 2011 census,2,1 +977951000000104,White: Irish - Scotland ethnic category 2011 census,2,1 +976661000000106,White: Irish - England and Wales ethnic category 2011 census,2,1 +494171000000107,White Irish - ethnic category 2001 census,2,1 +494181000000109,White Irish - ethnic category 2001 census,2,1 +977961000000101,White: Irish - Scotland ethnic category 2011 census,2,1 +110761000000106,English - ethnic category 2001 census,1,1 +14999008,Welsh,1,1 +154160004,White - ethnic group,1,1 +154161000,White British,1,1 +185985005,White British,1,1 +25804004,English,1,1 +315236000,White British,1,1 +401213008,White Scottish,1,1 +401214002,Other white British ethnic group,1,1 +41121000000107,Other white British ethnic group,1,1 +43481000000100,Other white British ethnic group,1,1 +44881000000100,White Scottish,1,1 +44891000000103,Other white British ethnic group,1,1 +494131000000105,White British - ethnic category 2001 census,1,1 +77711000000105,Other white British ethnic group,1,1 +82121000000108,Other white British ethnic group,1,1 +92391000000108,British or mixed British - ethnic category 2001 census,1,1 +92541000000108,Scottish - ethnic category 2001 census,1,1 +92551000000106,Welsh - ethnic category 2001 census,1,1 +92561000000109,Northern Irish - ethnic category 2001 census,1,1 +92571000000102,Cornish - ethnic category 2001 census,1,1 +976631000000101,White: English or Welsh or Scottish or Northern Irish or British - England and Wales ethnic category 2011 census,1,1 +977911000000103,White: Scottish - Scotland ethnic category 2011 census,1,1 +977931000000106,White: other British - Scotland ethnic category 2011 census,1,1 +977921000000109,White: Scottish - Scotland ethnic category 2011 census,1,1 +494151000000103,White British - ethnic category 2001 census,1,1 +976641000000105,White: English or Welsh or Scottish or Northern Irish or British - England and Wales ethnic category 2011 census,1,1 +977361000000102,White - Northern Ireland ethnic category 2011 census,1,1 +977941000000102,White: other British - Scotland ethnic category 2011 census,1,1 +494141000000101,White British - ethnic category 2001 census,1,1 \ No newline at end of file diff --git a/codelists/opensafely-ethnicity.csv b/codelists/opensafely-ethnicity.csv new file mode 100644 index 0000000..24287eb --- /dev/null +++ b/codelists/opensafely-ethnicity.csv @@ -0,0 +1,271 @@ +Description,Code,Grouping_16,Grouping_6 +Race: Caucasian,134B.,1,1 +Race - British,Y9930,1,1 +White - ethnic group,9S1..,1,1 +White British,XaFwD,1,1 +Other white British ethnic group,XaIui,1,1 +British or mixed British - ethnic category 2001 census,XaJQv,1,1 +White British - ethnic category 2001 census,XaQEa,1,1 +White:Eng/Welsh/Scot/NI/Brit - England and Wales 2011 census,XactH,1,1 +Irish (NMO),9SA9.,2,1 +White Irish,XaFwE,2,1 +Irish - ethnic category 2001 census,XaJQw,2,1 +Mixed Irish and other White - ethnic category 2001 census,XaJSN,2,1 +White Irish - ethnic category 2001 census,XaQEb,2,1 +White: Irish - England and Wales ethnic category 2011 census,XactI,2,1 +White: Irish - Scotland ethnic category 2011 census,Xacuu,2,1 +Race - Mediterranean,Y9932,3,1 +Greek &/or Greek Cypriot (NMO),9SAA.,3,1 +Turkish &/or Turkish Cypriot (NMO),9SAB.,3,1 +Other European (NMO),9SAC.,3,1 +New Zealand European,9T11.,3,1 +Greek/Greek Cypriot (NMO),XE2Nz,3,1 +Turkish/Turkish Cypriot (NMO),XE2O0,3,1 +Greek (NMO),XM1SF,3,1 +Greek Cypriot (NMO),XM1SG,3,1 +Turkish (NMO),XM1SH,3,1 +Turkish Cypriot (NMO),XM1SI,3,1 +Gypsies,XS7AU,3,1 +Other white ethnic group,XaFwF,3,1 +Irish traveller,XaFx2,3,1 +White Scottish,XaIuh,3,1 +Other White background - ethnic category 2001 census,XaJQx,3,1 +English - ethnic category 2001 census,XaJRC,3,1 +Scottish - ethnic category 2001 census,XaJRD,3,1 +Welsh - ethnic category 2001 census,XaJRE,3,1 +Northern Irish - ethnic category 2001 census,XaJRF,3,1 +Cornish - ethnic category 2001 census,XaJRG,3,1 +Cypriot (part not stated) - ethnic category 2001 census,XaJRg,3,1 +Ulster Scots - ethnic category 2001 census,XaJRh,3,1 +Greek - ethnic category 2001 census,XaJRi,3,1 +Greek Cypriot - ethnic category 2001 census,XaJRj,3,1 +Turkish - ethnic category 2001 census,XaJRk,3,1 +Turkish Cypriot - ethnic category 2001 census,XaJRl,3,1 +Italian - ethnic category 2001 census,XaJRm,3,1 +Irish Traveller - ethnic category 2001 census,XaJSB,3,1 +Traveller - ethnic category 2001 census,XaJSC,3,1 +Gypsy/Romany - ethnic category 2001 census,XaJSD,3,1 +Polish - ethnic category 2001 census,XaJSE,3,1 +Baltic Estonian/Latvian/Lithuanian - ethn categ 2001 census,XaJSF,3,1 +Commonwealth (Russian) Indep States - ethn categ 2001 census,XaJSG,3,1 +Kosovan - ethnic category 2001 census,XaJSH,3,1 +Albanian - ethnic category 2001 census,XaJSI,3,1 +Bosnian - ethnic category 2001 census,XaJSJ,3,1 +Croatian - ethnic category 2001 census,XaJSK,3,1 +Serbian - ethnic category 2001 census,XaJSL,3,1 +Other republics former Yugoslavia - ethnic categ 2001 census,XaJSM,3,1 +Other mixed White - ethnic category 2001 census,XaJSO,3,1 +Oth White European/European unsp/Mixed European 2001 census,XaJSP,3,1 +Other White or White unspecified ethnic category 2001 census,XaJSQ,3,1 +Romanian,XaR4o,3,1 +Bulgarian,XaR4p,3,1 +Czech,XaR61,3,1 +Slovak,XaVw5,3,1 +Portuguese,XaW8w,3,1 +White: Gypsy/Irish Traveller - Eng+Wales eth cat 2011 census,XactJ,3,1 +White: other White backgrd- Eng+Wales ethnic cat 2011 census,XactK,3,1 +White - Northern Ireland ethnic category 2011 census,XacuQ,3,1 +Irish Traveller - Northern Ireland ethnic cat 2011 census,XacuR,3,1 +White: Scottish - Scotland ethnic category 2011 census,Xacus,3,1 +White: other British - Scotland ethnic category 2011 census,Xacut,3,1 +White: Gypsy/Irish Traveller - Scotland ethnic cat 2011 cens,Xacuv,3,1 +White: Polish - Scotland ethnic category 2011 census,Xacux,3,1 +White: other White ethnic grp- Scotland ethnic cat 2011 cens,Xacuy,3,1 +Slovak Roma,XaedN,3,1 +Czech Roma,XaedQ,3,1 +Hungarian Roma,XaedS,3,1 +Polish Roma,XaedT,3,1 +Romanian Roma,XaedU,3,1 +Roma ethnic group,XaedV,3,1 +Bulgarian Roma,XaedW,3,1 +Traveller,Y1527,3,1 +Black Caribbean and White,XaIB5,4,2 +White and Black Caribbean - ethnic category 2001 census,XaJQy,4,2 +Mixed: White+Black Caribbean - Eng+Wales eth cat 2011 census,XactL,4,2 +Mixed: White and Black Caribbean - NI ethnic cat 2011 census,XacuS,4,2 +Race: Afro-caucasian,134L.,5,2 +Black African and White,XaIB6,5,2 +White and Black African - ethnic category 2001 census,XaJQz,5,2 +Mixed: White+Black African - Eng+Wales eth cat 2011 census,Xactd,5,2 +Mixed: White and Black African - NI ethnic cat 2011 census,XacuT,5,2 +"Other ethnic, Asian/White orig",9SB2.,6,2 +White and Asian - ethnic category 2001 census,XaJR0,6,2 +Mixed: White+Asian - Eng+Wales ethnic category 2011 census,Xacte,6,2 +Mixed: White and Asian - NI ethnic category 2011 census,XacuU,6,2 +Race: Mixed,134J.,7,2 +"Black - other, mixed",9S5..,7,2 +"Black - other, mixed",9S5..,7,2 +Other Black - Black/White orig,9S51.,7,2 +Other Black - Black/White orig,9S51.,7,2 +Other Black - Black/Asian orig,9S52.,7,2 +Other Black - Black/Asian orig,9S52.,7,2 +"Other ethnic, mixed origin",9SB..,7,2 +"Other ethnic, Black/White orig",9SB1.,7,2 +"Other ethnic, mixed white orig",9SB3.,7,2 +"Other ethnic, other mixed orig",9SB4.,7,2 +Mixed ethnic census group,XaFwG,7,2 +Other Mixed background - ethnic category 2001 census,XaJR1,7,2 +Black and Asian - ethnic category 2001 census,XaJRH,7,2 +Black and Chinese - ethnic category 2001 census,XaJRI,7,2 +Black and White - ethnic category 2001 census,XaJRJ,7,2 +Chinese and White - ethnic category 2001 census,XaJRK,7,2 +Asian and Chinese - ethnic category 2001 census,XaJRL,7,2 +Other Mixed or Mixed unspecified ethnic category 2001 census,XaJRM,7,2 +Mixed Asian - ethnic category 2001 census,XaJRN,7,2 +Mixed Black - ethnic category 2001 census,XaJRY,7,2 +Mixed: other Mixed/multiple backgrd - Eng+Wales 2011 census,Xactf,7,2 +Mixed: other Mixed/multiple ethnic backgrd - NI 2011 census,Xacua,7,2 +Mixed/multiple ethnic grps: any- Scot ethnic cat 2011 census,Xacuz,7,2 +Race - Indian,Y9931,8,3 +Indian,9S6..,8,3 +Indian sub-continent (NMO),9SA7.,8,3 +Indian or British Indian - ethnic category 2001 census,XaJR2,8,3 +Asian/Asian Brit: Indian - Eng+Wales ethnic cat 2011 census,Xactg,8,3 +Asian or Asian British: Indian - NI ethnic cat 2011 census,Xacuc,8,3 +"Asian: Indian, Indian Scot/Indian Brit- Scotland 2011 census",Xacv2,8,3 +Race: Pakistani,134M.,9,3 +Pakistani,9S7..,9,3 +Pakistani or British Pakistani - ethnic category 2001 census,XaJR3,9,3 +Asian/Asian British:Pakistani- Eng+Wales eth cat 2011 census,Xacth,9,3 +Asian/Asian British: Pakistani - NI ethnic cat 2011 census,Xacui,9,3 +Asian: Pakistani/Pakistani Scot/Pakistani Brit- Scot 2011,Xacv0,9,3 +Race: Bangladeshi,134I.,10,3 +Bangladeshi,9S8..,10,3 +Bangladeshi or British Bangladeshi - ethn categ 2001 census,XaJR4,10,3 +Asian/Asian Brit: Bangladeshi- Eng+Wales eth cat 2011 census,Xacti,10,3 +Asian/Asian British: Bangladeshi - NI ethnic cat 2011 census,Xacuj,10,3 +"Bangladeshi, Bangladeshi Scot or Bangladeshi Brit- Scot 2011",Xacv5,10,3 +E Afric Asian &/or Indo-Carib (NMO),9SA6.,11,3 +Other Asian (NMO),9SA8.,11,3 +South East Asian,9T1B.,11,3 +Other Asian,9T1E.,11,3 +E Afric Asian/Indo-Carib (NMO),XE2Ny,11,3 +East African Asian (NMO),XM1SD,11,3 +Indo-Caribbean (NMO),XM1SE,11,3 +Asian - ethnic group,XaFwz,11,3 +Other Asian ethnic group,XaFx0,11,3 +Other Asian background - ethnic category 2001 census,XaJR5,11,3 +Punjabi - ethnic category 2001 census,XaJRO,11,3 +Kashmiri - ethnic category 2001 census,XaJRP,11,3 +East African Asian - ethnic category 2001 census,XaJRQ,11,3 +Sri Lankan - ethnic category 2001 census,XaJRR,11,3 +Tamil - ethnic category 2001 census,XaJRS,11,3 +Sinhalese - ethnic category 2001 census,XaJRT,11,3 +British Asian - ethnic category 2001 census,XaJRU,11,3 +Caribbean Asian - ethnic category 2001 census,XaJRV,11,3 +Other Asian or Asian unspecified ethnic category 2001 census,XaJRW,11,3 +Nepali,XaW95,11,3 +Asian/Asian Brit: other Asian- Eng+Wales eth cat 2011 census,Xactk,11,3 +Asian/Asian British: other Asian - NI ethnic cat 2011 census,Xacul,11,3 +Asian: other Asian group - Scotland ethnic cat 2011 census,XacvG,11,3 +Race: Afro-Caribbean,134H.,12,4 +Race: West indian,134K.,12,4 +Black Caribbean,9S2..,12,4 +Black Caribbean &/or W.I. &/or Guyana,9S42.,12,4 +Caribbean I. &/or W.I. &/or Guyana (NMO),9SA3.,12,4 +Black Caribbean/W.I./Guyana,XE2Nt,12,4 +Caribbean I./W.I./Guyana (NMO),XE2Nw,12,4 +Caribbean Island (NMO),XM1S8,12,4 +West Indian (NMO),XM1S9,12,4 +Black West Indian,XaBz7,12,4 +Caribbean - ethnic category 2001 census,XaJR6,12,4 +Carib/Black: Caribbean/Carib Scot/Carib Brit- Scotland 2011,XacvJ,12,4 +Black African,9S3..,13,4 +Other African countries (NMO),9SA5.,13,4 +Black North African,XM1S3,13,4 +African - ethnic category 2001 census,XaJR7,13,4 +North African - ethnic category 2001 census,XaJST,13,4 +African: African/African Scot/African Brit - Scotland 2011,XacvH,13,4 +African: any other African - Scotland ethnic cat 2011 census,XacvI,13,4 +"Black, other, non-mixed origin",9S4..,14,4 +Black British,9S41.,14,4 +Black N African &/or Arab &/or Iranian,9S43.,14,4 +Black - other African country,9S44.,14,4 +Black E Afric Asia &/or Indo-Caribb,9S45.,14,4 +Black Indian sub-continent,9S46.,14,4 +Black - other Asian,9S47.,14,4 +Black Black - other,9S48.,14,4 +Black N African/Arab/Iranian,XE2Nu,14,4 +Black East African Asian/Indo-Caribbean,XE2Nv,14,4 +Black Arab,XM1S4,14,4 +Black Iranian,XM1S5,14,4 +Black East African Asian,XM1S6,14,4 +Black Indo-Caribbean,XM1S7,14,4 +Guyana (NMO),XM1SA,14,4 +Black Guyana,XaBz8,14,4 +Black - ethnic group,XaFwH,14,4 +Other black ethnic group,XaFwy,14,4 +Other Black background - ethnic category 2001 census,XaJR8,14,4 +Somali - ethnic category 2001 census,XaJRX,14,4 +Nigerian - ethnic category 2001 census,XaJRZ,14,4 +Black British - ethnic category 2001 census,XaJRa,14,4 +Other Black or Black unspecified ethnic category 2001 census,XaJRb,14,4 +Black/African/Carib/Black Brit: African- Eng+Wales 2011 cens,Xactl,14,4 +Black/African/Caribbn/Black Brit: Caribbean - Eng+Wales 2011,Xactm,14,4 +Black/Afr/Carib/Black Brit: other Black- Eng+Wales 2011 cens,Xactn,14,4 +Black/Afri/Carib/Black Brit: African- NI eth cat 2011 census,Xacum,14,4 +Black/Afri/Carib/Black Brit: Caribbean- NI eth cat 2011 cens,Xacun,14,4 +Black/Afri/Carib/Black Brit: other - NI eth cat 2011 census,Xacuo,14,4 +Carib/Black: Black/Black Scot/Black Brit- Scotland 2011 cens,XacvZ,14,4 +Carib/Black: any other Black/Caribbean grp - Scotland 2011,Xacva,14,4 +Chinese,9T1C.,15,5 +Chinese,9T1C.,15,5 +Chinese - ethnic category 2001 census,XaJR9,15,5 +Asian/Asian Brit: Chinese - Eng+Wales ethnic cat 2011 census,Xactj,15,5 +Asian/Asian British: Chinese - NI ethnic cat 2011 census,Xacuk,15,5 +Asian: Chinese - Scotland ethnic category 2011 census,XacvF,15,5 +Race: Arab,134C.,16,5 +Race: Chinese,134D.,16,5 +Race: Japanese,134E.,16,5 +Race: Korean,134F.,16,5 +Race: Oriental,134G.,16,5 +Race: Other,X76Gp,16,5 +Other ethnic non-mixed (NMO),9SA..,16,5 +Brit. ethnic minor. spec.(NMO),9SA1.,16,5 +Brit. ethnic minor. unsp (NMO),9SA2.,16,5 +N African Arab &/or Iranian (NMO),9SA4.,16,5 +Other ethnic NEC (NMO),9SAD.,16,5 +New Zealand ethnic groups,9T1..,16,5 +Other European in New Zealand,9T12.,16,5 +New Zealand Maori,9T13.,16,5 +Samoan,9T14.,16,5 +Cook Island Maori,9T15.,16,5 +Tongan,9T16.,16,5 +Niuean,9T17.,16,5 +Tokelauan,9T18.,16,5 +Fijian,9T19.,16,5 +Other Pacific ethnic group,9T1A.,16,5 +Other New Zealand ethnic group,9T1Y.,16,5 +New Zealand ethnic group NOS,9T1Z.,16,5 +N African Arab/Iranian (NMO),XE2Nx,16,5 +North African Arab (NMO),XM1SB,16,5 +Iranian (NMO),XM1SC,16,5 +Vietnamese,XaE4A,16,5 +Other ethnic group,XaFx1,16,5 +Other - ethnic category 2001 census,XaJRA,16,5 +Vietnamese - ethnic category 2001 census,XaJRc,16,5 +Japanese - ethnic category 2001 census,XaJRd,16,5 +Filipino - ethnic category 2001 census,XaJRe,16,5 +Malaysian - ethnic category 2001 census,XaJRf,16,5 +Jewish - ethnic category 2001 census,XaJSR,16,5 +Arab - ethnic category 2001 census,XaJSS,16,5 +"Mid East (excl Israeli, Iranian & Arab) - eth cat 2001 cens",XaJSU,16,5 +Israeli - ethnic category 2001 census,XaJSV,16,5 +Iranian - ethnic category 2001 census,XaJSW,16,5 +Kurdish - ethnic category 2001 census,XaJSX,16,5 +Moroccan - ethnic category 2001 census,XaJSY,16,5 +Latin American - ethnic category 2001 census,XaJSZ,16,5 +South and Central American - ethnic category 2001 census,XaJSa,16,5 +Mauritian/Seychellois/Maldivian/St Helena eth cat 2001census,XaJSb,16,5 +Buddhist - ethnic category 2001 census,XaJSc,16,5 +Hindu - ethnic category 2001 census,XaJSd,16,5 +Muslim - ethnic category 2001 census,XaJSe,16,5 +Sikh - ethnic category 2001 census,XaJSf,16,5 +Any other group - ethnic category 2001 census,XaJSg,16,5 +Yemeni,XaN9x,16,5 +Other ethnic group: Arab - Eng+Wales ethnic cat 2011 census,Xacto,16,5 +Other ethnic: any other grp - Eng+Wales eth cat 2011 census,Xactp,16,5 +Other ethnic group: Arab - NI ethnic category 2011 census,Xacup,16,5 +Other ethnic group: any other grp- NI ethnic cat 2011 census,Xacuq,16,5 +Other ethnic grp: Arab/Arab Scot/Arab British- Scotland 2011,Xacvb,16,5 +Other ethnic grp: any other ethnic grp- Scotland 2011 census,Xacvc,16,5 \ No newline at end of file diff --git a/codelists/opensafely-haematological-cancer-snomed.csv b/codelists/opensafely-haematological-cancer-snomed.csv new file mode 100644 index 0000000..29ab93a --- /dev/null +++ b/codelists/opensafely-haematological-cancer-snomed.csv @@ -0,0 +1,1439 @@ +id,name,active,notes +128933000,Chronic leukemia - category (morphologic abnormality),y,direct mapping +277610002,"Hodgkin's disease, nodular sclerosis - lymphocytic predominance (disorder)",y,direct mapping +847481000000109,Follicular lymphoma grade 1 (disorder),y,direct mapping +188733003,Chronic eosinophilic leukemia (disorder),y,direct mapping +188612002,Nodular lymphoma of lymph nodes of axilla and upper limb (disorder),y,direct mapping +277643003,High grade T-cell lymphoma (disorder),y,direct mapping +188732008,Myeloid leukemia (disorder),y,direct mapping +10639003,Solitary plasmacytoma of bone (morphologic abnormality),y,direct mapping +188510001,"Burkitt's lymphoma of lymph nodes of head, face and neck (disorder)",y,direct mapping +188517003,Burkitt's lymphoma of lymph nodes of multiple sites (disorder),y,direct mapping +65399007,Langerhans cell histiocytosis (disorder),y,direct mapping +188746008,Subacute monocytic leukemia (disorder),y,direct mapping +93521006,Hodgkin's disease of intrapelvic lymph nodes (disorder),y,direct mapping +189962004,"Malignant lymphoma, stem cell type (morphologic abnormality)",y,direct mapping +314930007,Low grade T-cell lymphoma morphology (morphologic abnormality),y,direct mapping +188514005,Burkitt's lymphoma of lymph nodes of inguinal region and lower limb (disorder),y,direct mapping +93183001,Malignant histiocytosis of intrapelvic lymph nodes (disorder),y,direct mapping +93134000,Letterer-Siwe disease of intrapelvic lymph nodes (disorder),y,direct mapping +128799007,"Hodgkin lymphoma, lymphocyte-rich (morphologic abnormality)",y,direct mapping +278052009,Malignant lymphoma of breast (disorder),y,direct mapping +277567002,T-cell prolymphocytic leukemia (disorder),y,direct mapping +45572000,"Hodgkin lymphoma, nodular sclerosis, grade 1 (morphologic abnormality)",y,direct mapping +302845006,"Nodular malignant lymphoma, lymphocytic - well differentiated (disorder)",y,direct mapping +93509007,"Hodgkin's disease, mixed cellularity of spleen (disorder)",y,direct mapping +269476000,Nodular lymphoma (disorder),y,direct mapping +41529000,"Hodgkin lymphoma, mixed cellularity (morphologic abnormality)",y,direct mapping +1091921000000103,B-cell non-Hodgkin's lymphoma (disorder),y,direct mapping +236512004,Leukemic infiltrate of kidney (disorder),y,direct mapping +307650006,Histiocytic medullary reticulosis (disorder),y,direct mapping +400001003,Primary cutaneous lymphoma (disorder),y,direct mapping +118605002,"Hodgkin lymphoma, nodular lymphocyte predominance (disorder)",y,direct mapping +127580003,Plasma cell neoplasm (morphologic abnormality),y,direct mapping +277623009,Monocytoid B-cell lymphoma (disorder),y,direct mapping +307634003,"Hodgkin's disease, lymphocytic depletion, reticular type (disorder)",y,direct mapping +93150008,Leukemic reticuloendotheliosis of lymph nodes of multiple sites (disorder),y,direct mapping +93197009,Malignant lymphoma of lymph nodes of multiple sites (disorder),y,direct mapping +277642008,Low grade T-cell lymphoma (disorder),y,direct mapping +713897006,Burkitt lymphoma co-occurrent with human immunodeficiency virus infection (disorder),y,direct mapping +118600007,Malignant lymphoma (disorder),y,direct mapping +93145002,Leukemic reticuloendotheliosis of intrapelvic lymph nodes (disorder),y,direct mapping +64575004,"Malignant lymphoma, small lymphocytic (morphologic abnormality)",y,direct mapping +847741000000106,Diffuse large B-cell lymphoma (disorder),y,direct mapping +188500005,"Lymphosarcoma of lymph nodes of head, face and neck (disorder)",y,direct mapping +277618009,Follicular low grade B-cell lymphoma (disorder),y,direct mapping +277632006,Diffuse malignant lymphoma - centroblastic polymorphic (disorder),y,direct mapping +56944001,Lymphoma stage III (finding),y,direct mapping +118599009,Hodgkin's disease (disorder),y,direct mapping +109965004,"Diffuse non-Hodgkin's lymphoma, lymphoblastic (disorder)",y,direct mapping +277637000,Large cell anaplastic lymphoma (disorder),y,direct mapping +128831004,Chronic myelomonocytic leukemia (morphologic abnormality),y,direct mapping +188580008,"Hodgkin's disease, mixed cellularity of intrapelvic lymph nodes (disorder)",y,direct mapping +118614007,"Langerhans cell histiocytosis, disseminated (disorder)",y,direct mapping +314927000,High grade T-cell lymphoma morphology (morphologic abnormality),y,direct mapping +188565002,"Hodgkin's disease, nodular sclerosis of lymph nodes of head, face and neck (disorder)",y,direct mapping +95224004,Reticulosarcoma of intra-abdominal lymph nodes (disorder),y,direct mapping +277625002,Follicular malignant lymphoma - small cleaved cell (disorder),y,direct mapping +314929002,Diffuse low grade B-cell lymphoma morphology (morphologic abnormality),y,direct mapping +188613007,Nodular lymphoma of lymph nodes of inguinal region and lower limb (disorder),y,direct mapping +188679001,Diffuse non-Hodgkin's lymphoma undifferentiated (diffuse) (disorder),y,direct mapping +277473004,B-cell chronic lymphocytic leukemia (disorder),y,direct mapping +188770007,Subacute myelomonocytic leukemia (disorder),y,direct mapping +110002002,Mast cell leukemia (disorder),y,direct mapping +847651000000100,Follicular lymphoma grade 3 (disorder),y,direct mapping +43985008,"Hodgkin lymphoma, nodular sclerosis, grade 2 (morphologic abnormality)",y,direct mapping +110007008,Adult T-cell leukemia/lymphoma (disorder),y,direct mapping +93494007,"Hodgkin's disease, lymphocytic-histiocytic predominance of intrapelvic lymph nodes (disorder)",y,direct mapping +71109004,"Hodgkin lymphoma, lymphocyte depletion, reticular (morphologic abnormality)",y,direct mapping +815361000000107,Acute myeloid leukaemia with 11q23 abnormality (disorder),y,direct mapping +109982002,Alpha heavy chain disease (disorder),y,direct mapping +93554008,Hodgkin's sarcoma of spleen (disorder),y,direct mapping +94708009,Mycosis fungoides of intrapelvic lymph nodes (disorder),y,direct mapping +277653002,Peripheral T-cell lymphoma - pleomorphic medium and large cell (disorder),y,direct mapping +93139005,Letterer-Siwe disease of lymph nodes of multiple sites (disorder),y,direct mapping +93525002,Hodgkin's disease of lymph nodes of inguinal region AND/OR lower limb (disorder),y,direct mapping +190955000,Histiocytosis X syndrome (disorder),y,direct mapping +188567005,"Hodgkin's disease, nodular sclerosis of intra-abdominal lymph nodes (disorder)",y,direct mapping +93146001,Leukemic reticuloendotheliosis of intrathoracic lymph nodes (disorder),y,direct mapping +413441006,"Acute monocytic leukemia, FAB M5b (disorder)",y,direct mapping +277549009,Chronic lymphocytic prolymphocytic leukemia syndrome (disorder),y,direct mapping +93526001,Hodgkin's disease of lymph nodes of multiple sites (disorder),y,direct mapping +277622004,Mucosa-associated lymphoma (disorder),y,direct mapping +94712003,Mycosis fungoides of lymph nodes of inguinal region AND/OR lower limb (disorder),y,direct mapping +188632001,Sézary's disease of intra-abdominal lymph nodes (disorder),y,direct mapping +188487008,Lymphosarcoma and reticulosarcoma (disorder),y,direct mapping +240531002,African Burkitt's lymphoma (disorder),y,direct mapping +255101006,Sézary disease of skin (disorder),y,direct mapping +274905008,"Malignant lymphoma - lymphocytic, intermediate differentiation (disorder)",y,direct mapping +285769009,Acute promyelocytic leukemia - hypogranular variant (disorder),y,direct mapping +95230004,Reticulosarcoma of lymph nodes of multiple sites (disorder),y,direct mapping +188590000,"Hodgkin's disease, lymphocytic depletion of lymph nodes of inguinal region and lower limb (disorder)",y,direct mapping +277616008,Diffuse low grade B-cell lymphoma (disorder),y,direct mapping +188493000,Reticulosarcoma of lymph nodes of inguinal region and lower limb (disorder),y,direct mapping +188592008,"Hodgkin's disease, lymphocytic depletion of spleen (disorder)",y,direct mapping +4950009,Sézary's disease (morphologic abnormality),y,direct mapping +188737002,Chloroma (disorder),y,direct mapping +52220008,"Acute megakaryoblastic leukemia, morphology (morphologic abnormality)",y,direct mapping +188503007,Lymphosarcoma of lymph nodes of axilla and upper limb (disorder),y,direct mapping +277589003,Atypical chronic myeloid leukemia (disorder),y,direct mapping +93135004,Letterer-Siwe disease of intrathoracic lymph nodes (disorder),y,direct mapping +188718006,"Malignant plasma cell neoplasm, extramedullary plasmacytoma (disorder)",y,direct mapping +189982000,Reticulosarcoma morphology (morphologic abnormality),y,direct mapping +277611003,"Hodgkin's disease, nodular sclerosis - mixed cellularity (disorder)",y,direct mapping +277619001,B-cell prolymphocytic leukemia (disorder),y,direct mapping +109977009,Peripheral T-cell lymphoma (disorder),y,direct mapping +188663002,Mast cell malignancy of intrathoracic lymph nodes (disorder),y,direct mapping +314931006,Nodular high grade B-cell lymphoma morphology (morphologic abnormality),y,direct mapping +359631009,"Acute myeloid leukemia, minimal differentiation, FAB M0 (disorder)",y,direct mapping +93196000,Malignant lymphoma of lymph nodes of inguinal region AND/OR lower limb (disorder),y,direct mapping +55020008,"Follicular lymphoma, grade 2 (morphologic abnormality)",y,direct mapping +109995007,Myelodysplastic syndrome (disorder),y,direct mapping +35287006,"Myeloid sarcoma, morphology (morphologic abnormality)",y,direct mapping +188512009,Burkitt's lymphoma of intra-abdominal lymph nodes (disorder),y,direct mapping +188648000,Leukemic reticuloendotheliosis of lymph nodes of axilla and upper limb (disorder),y,direct mapping +863741000000108,Clinical stage A chronic lymphocytic leukaemia (disorder),y,direct mapping +109976000,Lymphoepithelioid lymphoma (disorder),y,direct mapping +188744006,Monocytic leukemia (disorder),y,direct mapping +127225006,Chronic myelomonocytic leukemia (disorder),y,direct mapping +188569008,"Hodgkin's disease, nodular sclerosis of lymph nodes of inguinal region and lower limb (disorder)",y,direct mapping +847701000000108,Follicular lymphoma grade 3b (disorder),y,direct mapping +93493001,"Hodgkin's disease, lymphocytic-histiocytic predominance of intra-abdominal lymph nodes (disorder)",y,direct mapping +188745007,Chronic monocytic leukemia (disorder),y,direct mapping +373168002,Reticulosarcoma (disorder),y,direct mapping +426336007,Solitary osseous myeloma (disorder),y,direct mapping +109980005,Malignant immunoproliferative disease (disorder),y,direct mapping +188729005,Adult T-cell leukemia (disorder),y,direct mapping +188589009,"Hodgkin's disease, lymphocytic depletion of lymph nodes of axilla and upper limb (disorder)",y,direct mapping +269475001,"Malignant tumor of lymphoid, hemopoietic AND/OR related tissue (disorder)",y,direct mapping +303056000,"Malignant lymphoma, follicular center cell, cleaved (disorder)",y,direct mapping +109978004,T-cell lymphoma (disorder),y,direct mapping +188725004,Lymphoid leukemia (disorder),y,direct mapping +91857003,"Acute lymphoid leukemia, disease (disorder)",y,direct mapping +93495008,"Hodgkin's disease, lymphocytic-histiocytic predominance of intrathoracic lymph nodes (disorder)",y,direct mapping +93140007,Letterer-Siwe disease of spleen (disorder),y,direct mapping +188631008,Sézary's disease of intrathoracic lymph nodes (disorder),y,direct mapping +128924002,Mast cell leukemia (morphologic abnormality),y,direct mapping +188559002,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of inguinal region and lower limb (disorder)",y,direct mapping +112687003,"Hodgkin lymphoma, lymphocyte depletion (morphologic abnormality)",y,direct mapping +188554007,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of head, face and neck (disorder)",y,direct mapping +110006004,Prolymphocytic leukemia (disorder),y,direct mapping +739301006,Osteoporosis co-occurrent and due to multiple myeloma (disorder),y,direct mapping +359648001,"Acute myeloid leukemia with maturation, FAB M2 (disorder)",y,direct mapping +115245001,"Malignant lymphoma, follicular AND/OR nodular (morphologic abnormality)",y,direct mapping +188748009,Aleukemic monocytic leukemia (disorder),y,direct mapping +76422004,Lymphoma stage II (finding),y,direct mapping +95225003,Reticulosarcoma of intrapelvic lymph nodes (disorder),y,direct mapping +118608000,"Hodgkin's disease, nodular sclerosis (disorder)",y,direct mapping +118617000,Burkitt's lymphoma (disorder),y,direct mapping +74654000,Mantle cell lymphoma (morphologic abnormality),y,direct mapping +188642004,Malignant histiocytosis of lymph nodes of inguinal region and lower limb (disorder),y,direct mapping +93530003,Hodgkin's granuloma of intrapelvic lymph nodes (disorder),y,direct mapping +190818004,Waldenström macroglobulinemia (disorder),y,direct mapping +277609007,"Hodgkin's disease, lymphocytic predominance - diffuse (disorder)",y,direct mapping +277626001,Diffuse high grade B-cell lymphoma (disorder),y,direct mapping +400122007,Primary cutaneous T-cell lymphoma (disorder),y,direct mapping +188585003,"Hodgkin's disease, lymphocytic depletion of lymph nodes of head, face and neck (disorder)",y,direct mapping +277550009,Richter's syndrome (disorder),y,direct mapping +314922006,B-cell lymphoma morphology (morphologic abnormality),y,direct mapping +188502002,Lymphosarcoma of intra-abdominal lymph nodes (disorder),y,direct mapping +188541000,Hodgkin's granuloma of lymph nodes of multiple sites (disorder),y,direct mapping +95193005,Nodular lymphoma of spleen (disorder),y,direct mapping +94714002,Mycosis fungoides of spleen (disorder),y,direct mapping +188754005,Megakaryocytic leukemia (disorder),y,direct mapping +188489006,"Reticulosarcoma of lymph nodes of head, face and neck (disorder)",y,direct mapping +8900005,Hypoproteinemia (disorder),y,direct mapping +307633009,"Hodgkin's disease, lymphocytic depletion, diffuse fibrosis (disorder)",y,direct mapping +277629008,Diffuse malignant lymphoma - large non-cleaved cell (disorder),y,direct mapping +188691005,Malignant immunoproliferative small intestinal disease (disorder),y,direct mapping +277474005,B-cell chronic lymphocytic leukemia variant (disorder),y,direct mapping +303057009,"Malignant lymphoma, follicular center cell, non-cleaved (disorder)",y,direct mapping +128841001,Polycythemia vera (morphologic abnormality),y,direct mapping +94709001,Mycosis fungoides of intrathoracic lymph nodes (disorder),y,direct mapping +109979007,B-cell lymphoma (disorder),y,direct mapping +39795003,Hand-Schüller-Christian disease (disorder),y,direct mapping +93549004,Hodgkin's sarcoma of intrathoracic lymph nodes (disorder),y,direct mapping +13583002,Mast cell sarcoma (morphologic abnormality),y,direct mapping +95210003,"Plasma cell leukemia, disease (disorder)",y,direct mapping +91855006,"Acute leukemia, disease (disorder)",y,direct mapping +93198004,Malignant lymphoma of spleen (disorder),y,direct mapping +40411000,"Follicular lymphoma, grade 3 (morphologic abnormality)",y,direct mapping +420788006,Intraocular non-Hodgkin malignant lymphoma (disorder),y,direct mapping +445105005,Blastic plasmacytoid dendritic cell neoplasm (disorder),y,direct mapping +93133006,Letterer-Siwe disease of intra-abdominal lymph nodes (disorder),y,direct mapping +30440004,Lymphoma stage I (finding),y,direct mapping +188506004,Lymphosarcoma of spleen (disorder),y,direct mapping +30962008,Acute myelomonocytic leukemia (morphologic abnormality),y,direct mapping +35562000,Waldenstrom's macroglobulinemia (morphologic abnormality),y,direct mapping +443487006,Mantle cell lymphoma (disorder),y,direct mapping +397009000,Mast cell malignancy (disorder),y,direct mapping +93151007,Hairy cell leukemia of spleen (disorder),y,direct mapping +307635002,"Hodgkin's disease, nodular sclerosis - cellular phase (disorder)",y,direct mapping +277617004,High grade B-cell lymphoma (disorder),y,direct mapping +188669003,Mast cell malignancy of lymph nodes of multiple sites (disorder),y,direct mapping +188501009,Lymphosarcoma of intrathoracic lymph nodes (disorder),y,direct mapping +277601005,Acute monoblastic leukemia (disorder),y,direct mapping +118610003,"Hodgkin's disease, lymphocytic depletion (disorder)",y,direct mapping +93527005,Hodgkin's disease of spleen (disorder),y,direct mapping +314924007,Follicular low grade B-cell lymphoma morphology (morphologic abnormality),y,direct mapping +188515006,Burkitt's lymphoma of intrapelvic lymph nodes (disorder),y,direct mapping +50102004,"Malignant lymphoma, mixed small and large cell, diffuse (morphologic abnormality)",y,direct mapping +93188005,Malignant histiocytosis of lymph nodes of multiple sites (disorder),y,direct mapping +445448008,Acute myeloid leukemia with myelodysplasia-related changes (disorder),y,direct mapping +93138002,Letterer-Siwe disease of lymph nodes of inguinal region AND/OR lower limb (disorder),y,direct mapping +14537002,"Hodgkin lymphoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +307647008,"Malignant lymphoma, centroblastic type, follicular (disorder)",y,direct mapping +109984001,Gamma heavy chain disease (disorder),y,direct mapping +95188007,Nodular lymphoma of intrathoracic lymph nodes (disorder),y,direct mapping +95187002,Nodular lymphoma of intrapelvic lymph nodes (disorder),y,direct mapping +109991003,Acute myelofibrosis (disorder),y,direct mapping +307592006,Basophilic leukemia (disorder),y,direct mapping +14317002,"Acute myeloid leukemia, M6 type (morphologic abnormality)",y,direct mapping +277575008,T-cell acute lymphoblastic leukemia (disorder),y,direct mapping +109988003,Histiocytic sarcoma (disorder),y,direct mapping +188736006,Subacute myeloid leukemia (disorder),y,direct mapping +188641006,Malignant histiocytosis of lymph nodes of axilla and upper limb (disorder),y,direct mapping +21964009,"Malignant lymphoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +278189009,Hypergranular promyelocytic leukemia (disorder),y,direct mapping +188768003,Myelomonocytic leukemia (disorder),y,direct mapping +188538009,Hodgkin's granuloma of lymph nodes of inguinal region and lower limb (disorder),y,direct mapping +278453007,Acute biphenotypic leukemia (disorder),y,direct mapping +128923008,"Prolymphocytic leukemia, no ICD-O subtype (morphologic abnormality)",y,direct mapping +277614006,Prethymic and thymic T-cell lymphoma/leukemia (disorder),y,direct mapping +1090241000000107,Angioimmunoblastic T-cell lymphoma with dysproteinaemia (disorder),y,direct mapping +109989006,Multiple myeloma (disorder),y,direct mapping +449220000,Diffuse follicle center lymphoma (disorder),y,direct mapping +276836002,Primary cerebral lymphoma (disorder),y,direct mapping +39086001,"Hodgkin lymphoma, nodular sclerosis, cellular phase (morphologic abnormality)",y,direct mapping +95226002,Reticulosarcoma of intrathoracic lymph nodes (disorder),y,direct mapping +308121000,Follicular non-Hodgkin's lymphoma (disorder),y,direct mapping +118618005,Mycosis fungoides (disorder),y,direct mapping +307617006,Neutrophilic leukemia (disorder),y,direct mapping +847691000000108,Follicular lymphoma grade 3a (disorder),y,direct mapping +449386007,Philadelphia chromosome negative chronic myelogenous leukemia (disorder),y,direct mapping +302841002,Malignant lymphoma - small lymphocytic (disorder),y,direct mapping +285839005,Acute myelomonocytic leukemia - eosinophilic variant (disorder),y,direct mapping +414655002,Mature (peripheral) T-cell neoplasm (morphologic abnormality),y,direct mapping +302848008,"Nodular malignant lymphoma, lymphocytic - intermediate differentiation (disorder)",y,direct mapping +232075002,Lymphoma of retina (disorder),y,direct mapping +31047003,Lymphomatoid papulosis (disorder),y,direct mapping +302855005,Subacute leukemia (disorder),y,direct mapping +118601006,Non-Hodgkin's lymphoma (disorder),y,direct mapping +188504001,Lymphosarcoma of lymph nodes of inguinal region and lower limb (disorder),y,direct mapping +188672005,Follicular non-Hodgkin's mixed small cleaved and large cell lymphoma (disorder),y,direct mapping +445406001,Hepatosplenic T-cell lymphoma (disorder),y,direct mapping +128812005,"Langerhans cell histiocytosis, disseminated (morphologic abnormality)",y,direct mapping +314923001,Low grade B-cell lymphoma morphology (morphologic abnormality),y,direct mapping +110004001,"Acute promyelocytic leukemia, FAB M3 (disorder)",y,direct mapping +93143009,"Leukemia, disease (disorder)",y,direct mapping +307637005,"Malignant lymphoma, centroblastic-centrocytic, follicular (disorder)",y,direct mapping +188591001,"Hodgkin's disease, lymphocytic depletion of intrapelvic lymph nodes (disorder)",y,direct mapping +93547002,Hodgkin's sarcoma of intra-abdominal lymph nodes (disorder),y,direct mapping +277580004,Non-secretory myeloma (disorder),y,direct mapping +68979007,Heavy chain disease (disorder),y,direct mapping +188726003,Subacute lymphoid leukemia (disorder),y,direct mapping +93193008,Malignant lymphoma of intrathoracic lymph nodes (disorder),y,direct mapping +93182006,Malignant histiocytosis of intra-abdominal lymph nodes (disorder),y,direct mapping +285776004,Intermediate grade B-cell lymphoma (disorder),y,direct mapping +307623001,Malignant lymphoma - lymphoplasmacytic (disorder),y,direct mapping +188738007,Granulocytic sarcoma (disorder),y,direct mapping +277545003,T-cell chronic lymphocytic leukemia (disorder),y,direct mapping +275524009,Immunoproliferative neoplasm (disorder),y,direct mapping +446643000,Sarcoma of dendritic cells (accessory cells) (disorder),y,direct mapping +74189002,Hodgkin granuloma [obs] (morphologic abnormality),y,direct mapping +277587001,Juvenile chronic myeloid leukemia (disorder),y,direct mapping +51092000,B-cell chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality),y,direct mapping +109975001,T-zone lymphoma (disorder),y,direct mapping +103686008,Intestinal T-cell lymphoma (morphologic abnormality),y,direct mapping +54087003,Hairy cell leukemia (morphologic abnormality),y,direct mapping +92812005,"Chronic leukemia, disease (disorder)",y,direct mapping +128832006,Juvenile myelomonocytic leukemia (morphologic abnormality),y,direct mapping +118607005,"Hodgkin lymphoma, lymphocyte-rich (disorder)",y,direct mapping +188662007,"Mast cell malignancy of lymph nodes of head, face and neck (disorder)",y,direct mapping +188665009,Mast cell malignancy of lymph nodes of axilla and upper limb (disorder),y,direct mapping +277570003,Lymphoma with spill (disorder),y,direct mapping +188728002,Aleukemic lymphoid leukemia (disorder),y,direct mapping +188634000,Sézary's disease of lymph nodes of inguinal region and lower limb (disorder),y,direct mapping +302842009,Diffuse malignant lymphoma - centroblastic (disorder),y,direct mapping +188544008,"Hodgkin's sarcoma of lymph nodes of head, face and neck (disorder)",y,direct mapping +276811008,Gastric lymphoma (disorder),y,direct mapping +46923007,Hodgkin sarcoma [obs] (morphologic abnormality),y,direct mapping +863781000000100,Clinical stage C chronic lymphocytic leukaemia (disorder),y,direct mapping +50150000,Malignant mastocytosis (morphologic abnormality),y,direct mapping +277573001,Common acute lymphoblastic leukemia (disorder),y,direct mapping +188660004,Malignant mast cell tumors (disorder),y,direct mapping +95186006,Nodular lymphoma of intra-abdominal lymph nodes (disorder),y,direct mapping +448212009,Anaplastic lymphoma kinase negative anaplastic large cell lymphoma (disorder),y,direct mapping +93194002,Malignant lymphoma of lymph nodes of axilla AND/OR upper limb (disorder),y,direct mapping +19340000,"Malignant lymphoma, lymphoplasmacytic (morphologic abnormality)",y,direct mapping +188537004,Hodgkin's granuloma of lymph nodes of axilla and upper limb (disorder),y,direct mapping +95263006,Sézary's disease of spleen (disorder),y,direct mapping +277604002,Acute eosinophilic leukemia (disorder),y,direct mapping +52248008,"Hodgkin lymphoma, nodular sclerosis (morphologic abnormality)",y,direct mapping +55150002,Follicular lymphoma (morphologic abnormality),y,direct mapping +188548006,Hodgkin's sarcoma of lymph nodes of inguinal region and lower limb (disorder),y,direct mapping +188630009,"Sézary's disease of lymph nodes of head, face and neck (disorder)",y,direct mapping +93191005,Malignant lymphoma of intra-abdominal lymph nodes (disorder),y,direct mapping +738770003,Anaplastic lymphoma kinase positive anaplastic large cell lymphoma (disorder),y,direct mapping +93531004,Hodgkin's granuloma of intrathoracic lymph nodes (disorder),y,direct mapping +314926009,T-cell lymphoma morphology (morphologic abnormality),y,direct mapping +188640007,"Malignant histiocytosis of lymph nodes of head, face and neck (disorder)",y,direct mapping +22197008,Burkitt cell leukemia (morphologic abnormality),y,direct mapping +188575004,"Hodgkin's disease, mixed cellularity of lymph nodes of head, face and neck (disorder)",y,direct mapping +188566001,"Hodgkin's disease, nodular sclerosis of intrathoracic lymph nodes (disorder)",y,direct mapping +16893006,"Hodgkin lymphoma, lymphocyte depletion, diffuse fibrosis (morphologic abnormality)",y,direct mapping +188568000,"Hodgkin's disease, nodular sclerosis of lymph nodes of axilla and upper limb (disorder)",y,direct mapping +404133000,Subcutaneous panniculitic cutaneous T-cell lymphoma (disorder),y,direct mapping +109969005,"Diffuse non-Hodgkin's lymphoma, large cell (disorder)",y,direct mapping +1091861000000100,"Follicular lymphoma, cutaneous follicle centre (disorder)",y,direct mapping +109966003,"Diffuse non-Hodgkin's lymphoma, immunoblastic (disorder)",y,direct mapping +277569004,Large granular lymphocytic leukemia (disorder),y,direct mapping +93144003,Leukemic reticuloendotheliosis of intra-abdominal lymph nodes (disorder),y,direct mapping +167934009,Bone marrow: myeloma cells (finding),y,direct mapping +188578002,"Hodgkin's disease, mixed cellularity of lymph nodes of axilla and upper limb (disorder)",y,direct mapping +93189002,Malignant histiocytosis of spleen (disorder),y,direct mapping +277571004,B-cell acute lymphoblastic leukemia (disorder),y,direct mapping +188734009,Chronic neutrophilic leukemia (disorder),y,direct mapping +28054005,"Cutaneous T-cell lymphoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +277551008,Splenic lymphoma with villous lymphocytes (disorder),y,direct mapping +188577007,"Hodgkin's disease, mixed cellularity of intra-abdominal lymph nodes (disorder)",y,direct mapping +307625008,Malignant lymphoma - centrocytic (disorder),y,direct mapping +188741003,Aleukemic myeloid leukemia (disorder),y,direct mapping +359640008,"Acute myeloid leukemia without maturation, FAB M1 (disorder)",y,direct mapping +91861009,"Acute myeloid leukemia, disease (disorder)",y,direct mapping +277624003,Follicular malignant lymphoma - mixed cell type (disorder),y,direct mapping +128813000,Histiocytic sarcoma (morphologic abnormality),y,direct mapping +277568007,Hairy cell leukemia variant (disorder),y,direct mapping +118609008,"Hodgkin's disease, mixed cellularity (disorder)",y,direct mapping +1929004,"Non-Hodgkin lymphoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +188593003,"Hodgkin's disease, lymphocytic depletion of lymph nodes of multiple sites (disorder)",y,direct mapping +189984004,"Reticulosarcoma, pleomorphic cell type (morphologic abnormality)",y,direct mapping +90120004,Mycosis fungoides (morphologic abnormality),y,direct mapping +188511002,Burkitt's lymphoma of intrathoracic lymph nodes (disorder),y,direct mapping +94719007,"Myeloid sarcoma, disease (disorder)",y,direct mapping +93195001,"Malignant lymphoma of lymph nodes of head, face AND/OR neck (disorder)",y,direct mapping +66445009,Lymphoma stage IV (finding),y,direct mapping +188637007,Sézary's disease of lymph nodes of multiple sites (disorder),y,direct mapping +93500006,"Hodgkin's disease, lymphocytic-histiocytic predominance of spleen (disorder)",y,direct mapping +188667001,Mast cell malignancy of intrapelvic lymph nodes (disorder),y,direct mapping +285422003,Immunoglobulin D myeloma (disorder),y,direct mapping +94710006,Mycosis fungoides of lymph nodes of axilla AND/OR upper limb (disorder),y,direct mapping +445269007,Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue (disorder),y,direct mapping +188534006,"Hodgkin's granuloma of lymph nodes of head, face and neck (disorder)",y,direct mapping +188576003,"Hodgkin's disease, mixed cellularity of intrathoracic lymph nodes (disorder)",y,direct mapping +95231000,Reticulosarcoma of spleen (disorder),y,direct mapping +188587006,"Hodgkin's disease, lymphocytic depletion of intra-abdominal lymph nodes (disorder)",y,direct mapping +276815004,Lymphoma of intestine (disorder),y,direct mapping +93518009,"Hodgkin's disease, nodular sclerosis of spleen (disorder)",y,direct mapping +93192003,Malignant lymphoma of intrapelvic lymph nodes (disorder),y,direct mapping +307636001,"Malignant lymphoma, mixed lymphocytic-histiocytic, nodular (disorder)",y,direct mapping +277615007,Low grade B-cell lymphoma (disorder),y,direct mapping +24072005,"Acute leukemia, morphology, including blast cell OR undifferentiated leukemia (morphologic abnormality)",y,direct mapping +190817009,Macroglobulinemia (disorder),y,direct mapping +444910004,Primary mediastinal (thymic) large B-cell lymphoma (disorder),y,direct mapping +93520007,Hodgkin's disease of intra-abdominal lymph nodes (disorder),y,direct mapping +128805001,"Natural killer-/T-cell lymphoma, nasal and nasal-type (morphologic abnormality)",y,direct mapping +93548007,Hodgkin's sarcoma of intrapelvic lymph nodes (disorder),y,direct mapping +92814006,"Chronic lymphoid leukemia, disease (disorder)",y,direct mapping +277654008,Enteropathy-associated T-cell lymphoma (disorder),y,direct mapping +188582000,"Hodgkin's disease, mixed cellularity of lymph nodes of multiple sites (disorder)",y,direct mapping +77430005,Adult T-cell leukemia/lymphoma (morphologic abnormality),y,direct mapping +277579002,Light chain myeloma (disorder),y,direct mapping +32280000,"Lymphoid leukemia, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +277628000,Diffuse malignant lymphoma - large cleaved cell (disorder),y,direct mapping +314925008,High grade B-cell lymphoma morphology (morphologic abnormality),y,direct mapping +449108003,Philadelphia chromosome positive chronic myelogenous leukemia (disorder),y,direct mapping +128922003,"Plasma cell leukemia, morphology (morphologic abnormality)",y,direct mapping +70600005,"Hodgkin lymphoma, nodular lymphocyte predominance (morphologic abnormality)",y,direct mapping +188570009,"Hodgkin's disease, nodular sclerosis of intrapelvic lymph nodes (disorder)",y,direct mapping +94707004,Mycosis fungoides of intra-abdominal lymph nodes (disorder),y,direct mapping +307646004,"Malignant lymphoma, lymphocytic, poorly differentiated, nodular (disorder)",y,direct mapping +93184007,Malignant histiocytosis of intrathoracic lymph nodes (disorder),y,direct mapping +413440007,Acute lymphoblastic leukemia - category (morphologic abnormality),y,direct mapping +188586002,"Hodgkin's disease, lymphocytic depletion of intrathoracic lymph nodes (disorder)",y,direct mapping +415112005,Plasmacytoma (disorder),y,direct mapping +277651000,Peripheral T-cell lymphoma - pleomorphic small cell (disorder),y,direct mapping +118615008,Malignant mast cell tumor (disorder),y,direct mapping +190055003,Eosinophilic leukemia (morphologic abnormality),y,direct mapping +445227008,Juvenile myelomonocytic leukemia (disorder),y,direct mapping +77381001,Burkitt lymphoma (morphologic abnormality),y,direct mapping +87163000,"Leukemia, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +188609000,"Nodular lymphoma of lymph nodes of head, face and neck (disorder)",y,direct mapping +188558005,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of axilla and upper limb (disorder)",y,direct mapping +128931003,Leukemia - category (morphologic abnormality),y,direct mapping +847631000000107,Follicular lymphoma grade 2 (disorder),y,direct mapping +303055001,"Malignant lymphoma, follicular center cell (disorder)",y,direct mapping +128920006,Malignant histiocytosis (morphologic abnormality),y,direct mapping +128803008,Marginal zone B-cell lymphoma (morphologic abnormality),y,direct mapping +188536008,Hodgkin's granuloma of intra-abdominal lymph nodes (disorder),y,direct mapping +277664004,Malignant lymphoma of testis (disorder),y,direct mapping +314934003,Diffuse high grade B-cell lymphoma morphology (morphologic abnormality),y,direct mapping +63364005,"Chronic myelogenous leukemia, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +277613000,Cutaneous/peripheral T-cell lymphoma (disorder),y,direct mapping +835009,Angioimmunoblastic T-cell lymphoma (morphologic abnormality),y,direct mapping +188513004,Burkitt's lymphoma of lymph nodes of axilla and upper limb (disorder),y,direct mapping +28950004,"Acute promyelocytic leukemia, t(15;17)(q22;q11-12) (morphologic abnormality)",y,direct mapping +93523009,Hodgkin's disease of lymph nodes of axilla AND/OR upper limb (disorder),y,direct mapping +17788007,"Acute myeloid leukemia, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +92818009,"Chronic myeloid leukemia, disease (disorder)",y,direct mapping +189985003,"Reticulosarcoma, nodular (morphologic abnormality)",y,direct mapping +188668006,Mast cell malignancy of spleen (disorder),y,direct mapping +95192000,Nodular lymphoma of lymph nodes of multiple sites (disorder),y,direct mapping +277572006,Pre B-cell acute lymphoblastic leukemia (disorder),y,direct mapping +109962001,Diffuse non-Hodgkin's lymphoma (disorder),y,direct mapping +37064009,Hyperproteinemia (disorder),y,direct mapping +302856006,Aleukemic leukemia (disorder),y,direct mapping +22331004,"Acute monocytic leukemia, morphology (morphologic abnormality)",y,direct mapping +307622006,Prolymphocytic lymphosarcoma (disorder),y,direct mapping +128929007,Non-Hodgkin lymphoma - category (morphologic abnormality),y,direct mapping +188633006,Sézary's disease of lymph nodes of axilla and upper limb (disorder),y,direct mapping +277543005,Malignant white blood cell disorder (disorder),y,direct mapping +118602004,Hodgkin's granuloma (disorder),y,direct mapping +188674006,Diffuse malignant lymphoma - small non-cleaved cell (disorder),y,direct mapping +188498009,Lymphosarcoma (disorder),y,direct mapping +188664008,Mast cell malignancy of intra-abdominal lymph nodes (disorder),y,direct mapping +277627005,Nodular high grade B-cell lymphoma (disorder),y,direct mapping +820601000000103,Refractory anaemia with multilineage dysplasia (disorder),y,direct mapping +188579005,"Hodgkin's disease, mixed cellularity of lymph nodes of inguinal region and lower limb (disorder)",y,direct mapping +414166008,"Extranodal natural killer/T-cell lymphoma, nasal type (disorder)",y,direct mapping +118606001,Hodgkin's sarcoma (disorder),y,direct mapping +285421005,Immunoglobulin G myeloma (disorder),y,direct mapping +863761000000109,Clinical stage B chronic lymphocytic leukaemia (disorder),y,direct mapping +128875000,Primary cutaneous CD30 antigen positive large T-cell lymphoma (disorder),y,direct mapping +118611004,Sézary's disease (disorder),y,direct mapping +307341004,Atypical hairy cell leukemia (disorder),y,direct mapping +188666005,Mast cell malignancy of lymph nodes of inguinal region and lower limb (disorder),y,direct mapping +46732000,"Malignant lymphoma, large B-cell, diffuse, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +188645002,"Leukemic reticuloendotheliosis of lymph nodes of head, face and neck (disorder)",y,direct mapping +188551004,Hodgkin's sarcoma of lymph nodes of multiple sites (disorder),y,direct mapping +93136003,Letterer-Siwe disease of lymph nodes of axilla AND/OR upper limb (disorder),y,direct mapping +93524003,"Hodgkin's disease of lymph nodes of head, face AND/OR neck (disorder)",y,direct mapping +188676008,Malignant lymphoma - mixed small and large cell (disorder),y,direct mapping +307624007,Diffuse malignant lymphoma - centroblastic-centrocytic (disorder),y,direct mapping +277602003,Acute megakaryoblastic leukemia (disorder),y,direct mapping +118612006,Malignant histiocytosis (disorder),y,direct mapping +93451002,"Erythroleukemia, FAB M6 (disorder)",y,direct mapping +236513009,Lymphoma of kidney (disorder),y,direct mapping +188675007,Malignant lymphoma - small cleaved cell (disorder),y,direct mapping +69077002,Acute basophilic leukemia (morphologic abnormality),y,direct mapping +188649008,Leukemic reticuloendotheliosis of lymph nodes of inguinal region and lower limb (disorder),y,direct mapping +188516007,Burkitt's lymphoma of spleen (disorder),y,direct mapping +93536009,Hodgkin's granuloma of spleen (disorder),y,direct mapping +188507008,Lymphosarcoma of lymph nodes of multiple sites (disorder),y,direct mapping +118613001,Hairy cell leukemia (disorder),y,direct mapping +188547001,Hodgkin's sarcoma of lymph nodes of axilla and upper limb (disorder),y,direct mapping +109992005,Polycythemia vera (disorder),y,direct mapping +442537007,Non-Hodgkin lymphoma associated with Human immunodeficiency virus infection (disorder),y,direct mapping +188572001,"Hodgkin's disease, nodular sclerosis of lymph nodes of multiple sites (disorder)",y,direct mapping +37810007,"Myeloid leukemia, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +303017006,"Malignant lymphoma, convoluted cell type (disorder)",y,direct mapping +414628006,Lymphoid neoplasm (morphologic abnormality),y,direct mapping +188635004,Sézary's disease of intrapelvic lymph nodes (disorder),y,direct mapping +188627002,Mycosis fungoides of lymph nodes of multiple sites (disorder),y,direct mapping +285420006,Immunoglobulin A myeloma (disorder),y,direct mapping +277641001,Follicular malignant lymphoma - large cell (disorder),y,direct mapping +55921005,"Multiple myeloma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,direct mapping +277612005,"Hodgkin's disease, nodular sclerosis - lymphocytic depletion (disorder)",y,direct mapping +234577004,Lipochrome histiocytosis - familial (disorder),y,direct mapping +278051002,Malignant lymphoma of thyroid gland (disorder),y,direct mapping +110005000,"Acute myelomonocytic leukemia, FAB M4 (disorder)",y,direct mapping +188492005,Reticulosarcoma of lymph nodes of axilla and upper limb (disorder),y,direct mapping +188562004,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of multiple sites (disorder)",y,direct mapping +129000002,"Langerhans cell histiocytosis, unifocal (disorder)",y,direct mapping +188505000,Lymphosarcoma of intrapelvic lymph nodes (disorder),y,direct mapping +93522004,Hodgkin's disease of intrathoracic lymph nodes (disorder),y,direct mapping +313427003,Lambda light chain myeloma (disorder),y,direct mapping +277574007,Null cell acute lymphoblastic leukemia (disorder),y,direct mapping +128930002,Hodgkin lymphoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +92513005,Burkitt's tumor of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +419662008,Primary cutaneous follicle center cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +449419008,Follicular non-Hodgkin's lymphoma of intestine (disorder),y,descendant of concept mapped from leaf +702446006,Core binding factor acute myeloid leukemia (disorder),y,descendant of concept mapped from leaf +426248008,Aleukemic lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +404105000,Lymphomatoid papulosis type C (anaplastic large-cell lymphoma-like) (disorder),y,descendant of concept mapped from leaf +103685007,Hepatosplenic gamma-delta cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +734142002,B-cell lymphoma with features intermediate between diffuse large B-cell lymphoma and Burkitt lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +93208003,Malignant mast cell tumor of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +448867004,Diffuse non-Hodgkin's lymphoma of lung (disorder),y,descendant of concept mapped from leaf +450916006,Mixed phenotype acute leukemia with myeloid and B-cell lymphoid phenotypes (morphologic abnormality),y,descendant of concept mapped from leaf +93514006,"Hodgkin's disease, nodular sclerosis of lymph nodes of axilla AND/OR upper limb (disorder)",y,descendant of concept mapped from leaf +397356009,Indolent systemic mastocytosis (morphologic abnormality),y,descendant of concept mapped from leaf +734522002,Acute myeloid leukemia with FMS-like tyrosine kinase-3 mutation (disorder),y,descendant of concept mapped from leaf +413527004,"Anaplastic large cell lymphoma, T/Null cell, primary systemic type (morphologic abnormality)",y,descendant of concept mapped from leaf +425037004,"Low grade lymphoma, stage 1 (finding)",y,descendant of concept mapped from leaf +427056005,Subacute leukemia in remission (disorder),y,descendant of concept mapped from leaf +449217008,Diffuse non-Hodgkin's lymphoma of skin (disorder),y,descendant of concept mapped from leaf +128820007,"Prolymphocytic leukemia, B-cell type (morphologic abnormality)",y,descendant of concept mapped from leaf +450935006,Myeloid leukemia associated with Down Syndrome (morphologic abnormality),y,descendant of concept mapped from leaf +413843002,Chronic myeloid leukemia in myeloid blast crisis (disorder),y,descendant of concept mapped from leaf +93185008,Malignant histiocytosis of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +93186009,"Malignant histiocytosis of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +448269008,Lymphoma of lesser curvature of stomach (disorder),y,descendant of concept mapped from leaf +237865009,Primary amyloidosis of light chain type (disorder),y,descendant of concept mapped from leaf +128833001,Aggressive natural killer-cell leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +109970006,"Follicular non-Hodgkin's lymphoma, small cleaved cell (disorder)",y,descendant of concept mapped from leaf +190030009,Compound leukemias (disorder),y,descendant of concept mapped from leaf +418152006,Precursor B-cell neoplasm (morphologic abnormality),y,descendant of concept mapped from leaf +415111003,Plasma cell neoplasm (disorder),y,descendant of concept mapped from leaf +419879004,Atypical Burkitt's lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +94718004,Myeloid sarcoma in remission (disorder),y,descendant of concept mapped from leaf +763884007,Splenic diffuse red pulp small B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +397400006,Burkitt lymphoma/leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +450958009,"Malignant lymphoma, diffuse large B-cell, immunoblastic (morphologic abnormality)",y,descendant of concept mapped from leaf +110460003,"Plasma cell tumor, benign (morphologic abnormality)",y,descendant of concept mapped from leaf +115246000,Specified cutaneous AND/OR peripheral T cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +721304007,Refractory thrombocytopenia (disorder),y,descendant of concept mapped from leaf +109985000,Immunoproliferative small intestinal disease (disorder),y,descendant of concept mapped from leaf +426217000,Aleukemic leukemia in remission (disorder),y,descendant of concept mapped from leaf +109964000,"Diffuse non-Hodgkin's lymphoma, undifferentiated (disorder)",y,descendant of concept mapped from leaf +35601003,Monoclonal gammopathy of undetermined significance (morphologic abnormality),y,descendant of concept mapped from leaf +404126000,CD-30 positive pleomorphic large T-cell cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +734076008,Diffuse large B-cell lymphoma associated with chronic inflammation (morphologic abnormality),y,descendant of concept mapped from leaf +285424002,Immunoglobulin G monoclonal gammopathy of uncertain significance (disorder),y,descendant of concept mapped from leaf +239940004,Lymphomatoid granulomatosis (disorder),y,descendant of concept mapped from leaf +93487009,"Hodgkin's disease, lymphocytic depletion of lymph nodes of axilla AND/OR upper limb (disorder)",y,descendant of concept mapped from leaf +92813000,Chronic lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +450917002,Mixed phenotype acute leukemia with myeloid and T-cell lymphoid phenotypes (morphologic abnormality),y,descendant of concept mapped from leaf +724650000,Primary follicular dendritic cell sarcoma (disorder),y,descendant of concept mapped from leaf +450956008,B lymphoblastic leukemia lymphoma with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1) (morphologic abnormality),y,descendant of concept mapped from leaf +413587002,Smoldering myeloma (disorder),y,descendant of concept mapped from leaf +444597005,Extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue of stomach (disorder),y,descendant of concept mapped from leaf +721311006,Systemic Epstein-Barr virus positive T-cell lymphoproliferative disease of childhood (disorder),y,descendant of concept mapped from leaf +91858008,Acute monocytic leukemia in remission (disorder),y,descendant of concept mapped from leaf +404132005,Pleomorphic small/medium-sized cell cutaneous T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +404125001,CD-30 positive anaplastic large T-cell cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +425657001,Osteosclerotic myeloma (disorder),y,descendant of concept mapped from leaf +447766003,Lymphoma of pyloric antrum of stomach (disorder),y,descendant of concept mapped from leaf +413847001,Chronic phase chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +93169003,Lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +450920005,B lymphoblastic leukemia / lymphoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +450937003,Acute myeloid leukemia (megakaryoblastic) with t(1;22)(p13;q13); RBM15-MKL1 (morphologic abnormality),y,descendant of concept mapped from leaf +128807009,Precursor B-cell lymphoblastic lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +449072004,Lymphoma of gastrointestinal tract (disorder),y,descendant of concept mapped from leaf +449053004,Lymphoma of lower esophagus (disorder),y,descendant of concept mapped from leaf +718721006,Congenital analbuminemia (disorder),y,descendant of concept mapped from leaf +716788007,Epstein-Barr virus positive diffuse large B-cell lymphoma of elderly (disorder),y,descendant of concept mapped from leaf +80570006,Acute panmyelosis with myelofibrosis (morphologic abnormality),y,descendant of concept mapped from leaf +44255004,Lymphoma stage IIIe (finding),y,descendant of concept mapped from leaf +449216004,Diffuse non-Hodgkin's lymphoma of soft tissue (disorder),y,descendant of concept mapped from leaf +397467006,"Follicular lymphoma, cutaneous follicle center sub-type (morphologic abnormality)",y,descendant of concept mapped from leaf +93532006,Hodgkin's granuloma of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +82546001,Reactive immunoproliferative disease (disorder),y,descendant of concept mapped from leaf +93545005,Hodgkin's paragranuloma of spleen (disorder),y,descendant of concept mapped from leaf +736322001,Pediatric follicular lymphoma (disorder),y,descendant of concept mapped from leaf +404148006,Diffuse large B-cell lymphoma (nodal/systemic with skin involvement) (disorder),y,descendant of concept mapped from leaf +404104001,Lymphomatoid papulosis type B - mycosis fungoides-like (disorder),y,descendant of concept mapped from leaf +722953004,B-cell lymphoma unclassifiable with features intermediate between Burkitt lymphoma and diffuse large B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +699657009,Hepatosplenic gamma-delta cell lymphoma (disorder),y,descendant of concept mapped from leaf +448386004,Non-Hodgkin's lymphoma of oral cavity (disorder),y,descendant of concept mapped from leaf +397351004,"Post-transplant lymphoproliferative disorder, polymorphic (morphologic abnormality)",y,descendant of concept mapped from leaf +448254007,Non-Hodgkin's lymphoma of central nervous system (disorder),y,descendant of concept mapped from leaf +109994006,Essential thrombocythemia (disorder),y,descendant of concept mapped from leaf +724647003,Diffuse large B-cell lymphoma co-occurrent with chronic inflammation caused by Epstein-Barr virus (disorder),y,descendant of concept mapped from leaf +404114005,Erythrodermic mycosis fungoides (disorder),y,descendant of concept mapped from leaf +93552007,Hodgkin's sarcoma of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +6381009,Heavy chain disease (morphologic abnormality),y,descendant of concept mapped from leaf +93207008,Malignant mast cell tumor of spleen (disorder),y,descendant of concept mapped from leaf +128932005,Acute leukemia - category (morphologic abnormality),y,descendant of concept mapped from leaf +93516008,"Hodgkin's disease, nodular sclerosis of lymph nodes of inguinal region AND/OR lower limb (disorder)",y,descendant of concept mapped from leaf +713718006,Diffuse non-Hodgkin immunoblastic lymphoma co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +448709005,Non-Hodgkin's lymphoma of stomach (disorder),y,descendant of concept mapped from leaf +404150003,Mantle cell B-cell lymphoma (nodal/systemic with skin involvement) (disorder),y,descendant of concept mapped from leaf +254792006,Proliferating angioendotheliomatosis (disorder),y,descendant of concept mapped from leaf +97361000119109,Hypoalbuminemia due to protein calorie malnutrition (disorder),y,descendant of concept mapped from leaf +371012000,"Acute lymphoblastic leukemia, transitional pre-B-cell (disorder)",y,descendant of concept mapped from leaf +3172003,"Peripheral T-cell lymphoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,descendant of concept mapped from leaf +413443009,Acute myeloid leukemia - category (morphologic abnormality),y,descendant of concept mapped from leaf +449218003,Lymphoma of sigmoid colon (disorder),y,descendant of concept mapped from leaf +189509003,"Refractory anemia without sideroblasts, so stated (disorder)",y,descendant of concept mapped from leaf +721302006,Refractory anemia with ringed sideroblasts associated with marked thrombocytosis (disorder),y,descendant of concept mapped from leaf +92811003,Chronic leukemia in remission (disorder),y,descendant of concept mapped from leaf +721310007,Aggressive natural killer-cell leukemia (disorder),y,descendant of concept mapped from leaf +450914009,Mixed phenotype acute leukemia with t(9;22)(q34;q11.2); BCR-ABL1 (morphologic abnormality),y,descendant of concept mapped from leaf +103690005,Acute myeloid leukemia without maturation (morphologic abnormality),y,descendant of concept mapped from leaf +702786004,Follicular non-Hodgkin's lymphoma diffuse follicle center sub-type grade 1 (disorder),y,descendant of concept mapped from leaf +93551000,"Hodgkin's sarcoma of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +397345009,Acute leukemia of ambiguous lineage (morphologic abnormality),y,descendant of concept mapped from leaf +404110001,Hypomelanotic mycosis fungoides (disorder),y,descendant of concept mapped from leaf +414791003,"Myelodysplastic syndrome, unclassified by World Health Organization classification (disorder)",y,descendant of concept mapped from leaf +397011009,Mast cell malignancy of lymph nodes (disorder),y,descendant of concept mapped from leaf +397350003,Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue (morphologic abnormality),y,descendant of concept mapped from leaf +119247004,Hypoalbuminemia (disorder),y,descendant of concept mapped from leaf +446688004,Leukemic infiltration (morphologic abnormality),y,descendant of concept mapped from leaf +414553000,Kappa light chain myeloma (disorder),y,descendant of concept mapped from leaf +109971005,"Follicular non-Hodgkin's lymphoma, mixed small cleaved cell and large cell (disorder)",y,descendant of concept mapped from leaf +738527001,Myeloid and/or lymphoid neoplasm associated with platelet derived growth factor receptor alpha rearrangement (disorder),y,descendant of concept mapped from leaf +419094004,Immunodeficiency-associated Burkitt's lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +449074003,Lymphoma of small intestine (disorder),y,descendant of concept mapped from leaf +404103007,Lymphomatoid papulosis type A (CD-30 positive type) (disorder),y,descendant of concept mapped from leaf +415156005,Precursor T-cell neoplasm (morphologic abnormality),y,descendant of concept mapped from leaf +404139001,Leukemic infiltration of skin in hairy-cell leukemia (disorder),y,descendant of concept mapped from leaf +449075002,Lymphoma of cardioesophageal junction (disorder),y,descendant of concept mapped from leaf +397342007,Acute myeloid leukemia with multilineage dysplasia without antecedent myelodysplastic syndrome (morphologic abnormality),y,descendant of concept mapped from leaf +426885008,"Hodgkin's disease, lymphocytic depletion of lymph nodes of head (disorder)",y,descendant of concept mapped from leaf +404131003,CD-30 negative T-immunoblastic cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +404155008,Granulocytic sarcoma affecting skin (disorder),y,descendant of concept mapped from leaf +404144008,Primary cutaneous diffuse large cell B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +709471005,Periodontitis co-occurrent with leukemia (disorder),y,descendant of concept mapped from leaf +93519001,"Hodgkin's disease, nodular sclerosis of extranodal AND/OR solid organ site (disorder)",y,descendant of concept mapped from leaf +92511007,Burkitt's tumor of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +449307001,Follicular non-Hodgkin's lymphoma of ovary (disorder),y,descendant of concept mapped from leaf +426370008,Subacute lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +397015000,Systemic mastocytosis with associated clonal hematological non-mast cell lineage disease (disorder),y,descendant of concept mapped from leaf +415113000,Plasmacytoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +404136008,Aggressive natural killer-cell leukemia involving skin (disorder),y,descendant of concept mapped from leaf +450907007,Hydroa vacciniforme-like lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +404137004,Precursor B-cell lymphoblastic lymphoma involving skin (disorder),y,descendant of concept mapped from leaf +404113004,Tumor stage mycosis fungoides (disorder),y,descendant of concept mapped from leaf +13048006,Orbital lymphoma (disorder),y,descendant of concept mapped from leaf +448553002,Lymphoma of pelvis (disorder),y,descendant of concept mapped from leaf +448663003,Diffuse non-Hodgkin's lymphoma of stomach (disorder),y,descendant of concept mapped from leaf +188531003,Hodgkin's paragranuloma of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +419586003,"Primary cutaneous T-cell lymphoma, large cell, CD30-negative (morphologic abnormality)",y,descendant of concept mapped from leaf +766935007,Primary bone lymphoma (disorder),y,descendant of concept mapped from leaf +448317000,Follicular non-Hodgkin's lymphoma of soft tissue (disorder),y,descendant of concept mapped from leaf +413537009,Angioimmunoblastic T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +414654003,Mature (peripheral) B-cell neoplasm (morphologic abnormality),y,descendant of concept mapped from leaf +450954006,B lymphoblastic leukemia lymphoma with hypodiploidy (Hypodiploid ALL) (morphologic abnormality),y,descendant of concept mapped from leaf +123313007,"Alpha heavy chain disease, enteric form (disorder)",y,descendant of concept mapped from leaf +418789003,Primary cutaneous plasmacytoma (morphologic abnormality),y,descendant of concept mapped from leaf +127070008,Malignant histiocytic disorder (disorder),y,descendant of concept mapped from leaf +702476004,Therapy-related myelodysplastic syndrome (disorder),y,descendant of concept mapped from leaf +450959001,T-cell/histiocyte rich large B-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +450915005,Mixed phenotype acute leukemia with t(v;11q23); MLL rearranged (morphologic abnormality),y,descendant of concept mapped from leaf +404120006,Localized pagetoid reticulosis (disorder),y,descendant of concept mapped from leaf +420028002,Primary cutaneous marginal zone B-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +61301000119102,Disorder of central nervous system co-occurrent and due to acute lymphoid leukemia (disorder),y,descendant of concept mapped from leaf +404111002,Lymphomatoid papulosis-associated mycosis fungoides (disorder),y,descendant of concept mapped from leaf +447989004,Non-Hodgkin's lymphoma of extranodal site (disorder),y,descendant of concept mapped from leaf +419386004,Pagetoid reticulosis (morphologic abnormality),y,descendant of concept mapped from leaf +397347001,Precursor B-lymphoblastic leukemia/lymphoblastic lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +93205000,Malignant mast cell tumor of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +425869007,"Acute promyelocytic leukemia, FAB M3, in remission (disorder)",y,descendant of concept mapped from leaf +448231003,Follicular non-Hodgkin's lymphoma of nose (disorder),y,descendant of concept mapped from leaf +425941003,Pre B-cell acute lymphoblastic leukemia in remission (disorder),y,descendant of concept mapped from leaf +25050002,"Alpha heavy chain disease, respiratory form (disorder)",y,descendant of concept mapped from leaf +93190006,Malignant histiocytosis of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +722954005,B-cell lymphoma unclassifiable with features intermediate between classical Hodgkin lymphoma and diffuse large B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +702977001,Follicular non-Hodgkin's lymphoma diffuse follicle center cell sub-type grade 2 (disorder),y,descendant of concept mapped from leaf +93201009,Malignant mast cell tumor of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +762315004,Therapy related acute myeloid leukemia due to and following administration of antineoplastic agent (disorder),y,descendant of concept mapped from leaf +715950008,Anaplastic lymphoma kinase positive large B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +721313009,Indeterminate dendritic cell neoplasm (disorder),y,descendant of concept mapped from leaf +128874001,Cutaneous CD30+ lymphoproliferative disorder (disorder),y,descendant of concept mapped from leaf +448774004,Non-Hodgkin's lymphoma of uterine cervix (disorder),y,descendant of concept mapped from leaf +448384001,Non-Hodgkin's lymphoma of nose (disorder),y,descendant of concept mapped from leaf +415285009,Refractory cytopenia with multilineage dysplasia (disorder),y,descendant of concept mapped from leaf +450929006,Acute myeloid leukemia with inv(3)(q21q26.2) or t(3;3)(q21;q26.2); RPN1-EVI1 (morphologic abnormality),y,descendant of concept mapped from leaf +404172001,Mast cell leukemia affecting skin (disorder),y,descendant of concept mapped from leaf +20224008,Delta heavy chain disease (disorder),y,descendant of concept mapped from leaf +61291000119103,Disorder of central nervous system co-occurrent and due to acute lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +733598001,Acute myeloid leukemia with t(6;9)(p23;q34) translocation (disorder),y,descendant of concept mapped from leaf +414780005,Mucosa-associated lymphoid tissue lymphoma of orbit (disorder),y,descendant of concept mapped from leaf +415110002,Plasma cell myeloma/plasmacytoma (disorder),y,descendant of concept mapped from leaf +714463003,Primary effusion lymphoma co-occurrent with infection caused by Human herpesvirus 8 (disorder),y,descendant of concept mapped from leaf +450909005,Plasmablastic lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +285428004,Immunoglobulin D monoclonal gammopathy of uncertain significance (disorder),y,descendant of concept mapped from leaf +128824003,Precursor T-cell lymphoblastic leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +94688000,Mixed cell type lymphosarcoma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +441313008,Indolent multiple myeloma (disorder),y,descendant of concept mapped from leaf +447100004,Marginal zone lymphoma (disorder),y,descendant of concept mapped from leaf +110000005,Refractory anemia with excess blasts in transformation (disorder),y,descendant of concept mapped from leaf +699818003,T-cell large granular lymphocytic leukemia (disorder),y,descendant of concept mapped from leaf +766048008,Acute myeloid leukemia and myelodysplastic syndrome related to radiation (disorder),y,descendant of concept mapped from leaf +93542008,"Hodgkin's paragranuloma of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +93550004,Hodgkin's sarcoma of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +402880009,Primary cutaneous large T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +450950002,B lymphoblastic leukemia lymphoma with t(9;22)(q34;q11.2); BCR-ABL1 (morphologic abnormality),y,descendant of concept mapped from leaf +94716000,Myeloid leukemia in remission (disorder),y,descendant of concept mapped from leaf +399456004,Plasma cell myeloma/plasmacytoma (morphologic abnormality),y,descendant of concept mapped from leaf +404138009,Small lymphocytic B-cell lymphoma involving skin (disorder),y,descendant of concept mapped from leaf +762690000,Classical Hodgkin lymphoma (disorder),y,descendant of concept mapped from leaf +713483007,Reticulosarcoma co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +84631004,"Lymphoproliferative disease, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,descendant of concept mapped from leaf +415109007,Plasma cell myeloma - category (morphologic abnormality),y,descendant of concept mapped from leaf +734066005,Diffuse large B-cell lymphoma of central nervous system (disorder),y,descendant of concept mapped from leaf +734141009,Splenic B-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +449058008,Follicular non-Hodgkin's lymphoma of tonsil (disorder),y,descendant of concept mapped from leaf +450908002,Primary cutaneous gamma-delta T-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +415284008,Refractory anemia with excess blasts-2 (disorder),y,descendant of concept mapped from leaf +415283002,Refractory anemia with excess blasts-1 (disorder),y,descendant of concept mapped from leaf +103682005,Subcutaneous panniculitic T-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +724645006,T-cell hystiocyte rich large B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +93496009,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of axilla AND/OR upper limb (disorder)",y,descendant of concept mapped from leaf +128798004,Composite Hodgkin and non-Hodgkin lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +448217003,Follicular non-Hodgkin's lymphoma of prostate (disorder),y,descendant of concept mapped from leaf +128806000,Precursor cell lymphoblastic lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +93555009,Hodgkin's sarcoma of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +447656001,Lymphoma of pylorus of stomach (disorder),y,descendant of concept mapped from leaf +95264000,Sézary's disease of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +766046007,Acute myeloid leukemia and myelodysplastic syndrome related to topoisomerase type 2 inhibitor (disorder),y,descendant of concept mapped from leaf +404121005,Generalized pagetoid reticulosis (disorder),y,descendant of concept mapped from leaf +718195003,Inherited predisposition to essential thrombocythemia (disorder),y,descendant of concept mapped from leaf +404115006,Bullous mycosis fungoides (disorder),y,descendant of concept mapped from leaf +703820005,Acute myeloid leukemia with mutated NPM1 (morphologic abnormality),y,descendant of concept mapped from leaf +734524001,Acute myeloid leukemia with FMS-like tyrosine kinase-3 mutation (morphologic abnormality),y,descendant of concept mapped from leaf +93137007,"Letterer-Siwe disease of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +413840004,Chronic lymphoid leukemia - category (morphologic abnormality),y,descendant of concept mapped from leaf +92509003,Burkitt's tumor of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +721555001,Follicular lymphoma of small intestine (disorder),y,descendant of concept mapped from leaf +93515007,"Hodgkin's disease, nodular sclerosis of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +402881008,Primary cutaneous B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +404143002,Primary cutaneous follicular center B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +449065000,Diffuse non-Hodgkin's lymphoma of nose (disorder),y,descendant of concept mapped from leaf +93497000,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +721306009,Therapy related acute myeloid leukemia and myelodysplastic syndrome (disorder),y,descendant of concept mapped from leaf +413616009,B-cell neoplasm (morphologic abnormality),y,descendant of concept mapped from leaf +112241002,Lymphoma stage III 1 (finding),y,descendant of concept mapped from leaf +5701003,Lymphoma stage IIe (finding),y,descendant of concept mapped from leaf +94686001,Mixed cell type lymphosarcoma of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +419770008,Endemic Burkitt's lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +12341000132100,"B-cell lymphoma, unclassifiable, with features intermediate between diffuse large B-cell lymphoma and Burkitt lymphoma (morphologic abnormality)",y,descendant of concept mapped from leaf +445925008,Lymphomatous infiltration (morphologic abnormality),y,descendant of concept mapped from leaf +128827005,Acute myeloid leukemia with multilineage dysplasia (morphologic abnormality),y,descendant of concept mapped from leaf +109968002,"Diffuse non-Hodgkin's lymphoma, small cell (disorder)",y,descendant of concept mapped from leaf +89487002,Lymphoma stage Ie (finding),y,descendant of concept mapped from leaf +765136002,Primary cutaneous CD8 positive aggressive epidermotropic cytotoxic T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +91860005,Acute myeloid leukemia in remission (disorder),y,descendant of concept mapped from leaf +93206004,Malignant mast cell tumor of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +763666008,Splenic marginal zone B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +448376000,Non-Hodgkin's lymphoma of ovary (disorder),y,descendant of concept mapped from leaf +404151004,Leukemic infiltration of skin in myeloid leukemia (disorder),y,descendant of concept mapped from leaf +94687005,Mixed cell type lymphosarcoma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +449177007,Diffuse non-Hodgkin's lymphoma of bone (disorder),y,descendant of concept mapped from leaf +426124006,"Acute myeloid leukemia with maturation, FAB M2, in remission (disorder)",y,descendant of concept mapped from leaf +404154007,Leukemic infiltration of skin in monocytic leukemia (disorder),y,descendant of concept mapped from leaf +404145009,Primary cutaneous anaplastic large cell B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +128800006,Primary effusion lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +404152006,Leukemic infiltration of skin in acute myeloid leukemia (disorder),y,descendant of concept mapped from leaf +93501005,"Hodgkin's disease, lymphocytic-histiocytic predominance of extranodal AND/OR solid organ site (disorder)",y,descendant of concept mapped from leaf +128821006,"Prolymphocytic leukemia, T-cell type (morphologic abnormality)",y,descendant of concept mapped from leaf +733895005,Primary cutaneous CD8 positive aggressive epidermotropic cytotoxic T-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +420302007,Reticulosarcoma associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +724649000,Langerhans cell sarcoma (disorder),y,descendant of concept mapped from leaf +763477007,Primary lymphoma of conjunctiva (disorder),y,descendant of concept mapped from leaf +427642009,T-cell acute lymphoblastic leukemia in remission (disorder),y,descendant of concept mapped from leaf +285430002,Light chain monoclonal gammopathy of uncertain significance (disorder),y,descendant of concept mapped from leaf +93543003,Hodgkin's paragranuloma of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +95194004,Nodular lymphoma of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +404109006,Follicular mucinosis type mycosis fungoides (disorder),y,descendant of concept mapped from leaf +404127009,CD-30 positive T-immunoblastic cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +450943001,"Post transplant lymphoproliferative disorder, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,descendant of concept mapped from leaf +128830003,Therapy-related acute myeloid leukemia and myelodysplastic syndrome (morphologic abnormality),y,descendant of concept mapped from leaf +448738008,Non-Hodgkin's lymphoma of soft tissue (disorder),y,descendant of concept mapped from leaf +441559006,Mantle cell lymphoma of spleen (disorder),y,descendant of concept mapped from leaf +128808004,Precursor T-cell lymphoblastic lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +413842007,Chronic myeloid leukemia in lymphoid blast crisis (disorder),y,descendant of concept mapped from leaf +404134006,Anaplastic large T-cell systemic malignant lymphoma (disorder),y,descendant of concept mapped from leaf +448672006,Follicular non-Hodgkin's lymphoma of lung (disorder),y,descendant of concept mapped from leaf +93506000,"Hodgkin's disease, mixed cellularity of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +93187000,Malignant histiocytosis of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +448319002,Diffuse non-Hodgkin's lymphoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +725391003,Acute myeloid leukemia with t(8;16)(p11;p13) translocation (morphologic abnormality),y,descendant of concept mapped from leaf +128823009,Precursor B-cell lymphoblastic leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +404118008,Syringotropic mycosis fungoides (disorder),y,descendant of concept mapped from leaf +714251006,Philadelphia chromosome-negative precursor B-cell acute lymphoblastic leukemia (disorder),y,descendant of concept mapped from leaf +449221001,Diffuse non-Hodgkin's lymphoma of central nervous system (disorder),y,descendant of concept mapped from leaf +397344008,"Therapy-related acute myeloid leukemia and myelodysplastic syndrome, topoisomerase type II inhibitor-related type (morphologic abnormality)",y,descendant of concept mapped from leaf +448468003,Diffuse non-Hodgkin's lymphoma of oral cavity (disorder),y,descendant of concept mapped from leaf +404147001,Follicular center B-cell lymphoma (nodal/systemic with skin involvement) (disorder),y,descendant of concept mapped from leaf +449059000,Follicular non-Hodgkin's lymphoma of uterine cervix (disorder),y,descendant of concept mapped from leaf +449222008,Follicular non-Hodgkin's lymphoma of stomach (disorder),y,descendant of concept mapped from leaf +404135007,Angiocentric natural killer/T-cell malignant lymphoma involving skin (disorder),y,descendant of concept mapped from leaf +421246008,Precursor T-cell lymphoblastic lymphoma (disorder),y,descendant of concept mapped from leaf +763309005,Acute myeloid leukemia with nucleophosmin 1 somatic mutation (disorder),y,descendant of concept mapped from leaf +450928003,Acute myeloid leukemia with t(6;9)(p23;q34); DEK-NUP214 (morphologic abnormality),y,descendant of concept mapped from leaf +430338009,Smoldering chronic lymphocytic leukemia (disorder),y,descendant of concept mapped from leaf +103688009,Acute myeloid leukemia with abnormal marrow eosinophils and inv(16)(p13q22) or t(16;16)(p13;q22) (morphologic abnormality),y,descendant of concept mapped from leaf +735332000,Primary cutaneous diffuse large cell B-cell lymphoma of lower extremity (disorder),y,descendant of concept mapped from leaf +427141003,Malignant lymphoma in remission (disorder),y,descendant of concept mapped from leaf +722795004,Meningeal leukemia (disorder),y,descendant of concept mapped from leaf +404119000,Pagetoid reticulosis (disorder),y,descendant of concept mapped from leaf +450949002,"B lymphoblastic leukemia lymphoma, no International Classification of Diseases for Oncology subtype (morphologic abnormality)",y,descendant of concept mapped from leaf +404106004,Lymphomatoid papulosis with Hodgkin's disease (disorder),y,descendant of concept mapped from leaf +74053007,Lymphoma stage IIIs (finding),y,descendant of concept mapped from leaf +404153001,Leukemic infiltration of skin in chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +285426000,Immunoglobulin M monoclonal gammopathy of uncertain significance (disorder),y,descendant of concept mapped from leaf +449418000,Follicular non-Hodgkin's lymphoma of testis (disorder),y,descendant of concept mapped from leaf +734044003,Anaplastic lymphoma kinase positive anaplastic large cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +449173006,Diffuse non-Hodgkin's lymphoma of tonsil (disorder),y,descendant of concept mapped from leaf +413389003,Accelerated phase chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +413442004,Acute monocytic/monoblastic leukemia (disorder),y,descendant of concept mapped from leaf +93142004,Leukemia in remission (disorder),y,descendant of concept mapped from leaf +450953000,B lymphoblastic leukemia lymphoma with hyperdiploidy (morphologic abnormality),y,descendant of concept mapped from leaf +110459008,"Malignant lymphoma, metastatic (morphologic abnormality)",y,descendant of concept mapped from leaf +763796007,Megakaryoblastic acute myeloid leukemia with t(1;22)(p13;q13) (disorder),y,descendant of concept mapped from leaf +397357000,"Systemic mastocytosis with associated clonal, hematologic non-mast-cell lineage disease (morphologic abnormality)",y,descendant of concept mapped from leaf +91856007,Acute lymphoid leukemia in remission (disorder),y,descendant of concept mapped from leaf +128802003,Splenic marginal zone B-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +425688002,Philadelphia chromosome-positive acute lymphoblastic leukemia (disorder),y,descendant of concept mapped from leaf +725437002,Chronic lymphocytic leukemia genetic mutation variant (disorder),y,descendant of concept mapped from leaf +449219006,Follicular non-Hodgkin's lymphoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +60620005,Epsilon heavy chain disease (disorder),y,descendant of concept mapped from leaf +128822004,"Precursor cell lymphoblastic leukemia, no ICD-O subtype (morphologic abnormality)",y,descendant of concept mapped from leaf +725390002,Acute myeloid leukemia with t(8;16)(p11;p13) translocation (disorder),y,descendant of concept mapped from leaf +724644005,Myeloid leukemia co-occurrent with Down syndrome (disorder),y,descendant of concept mapped from leaf +702785000,Large cell anaplastic lymphoma T cell and Null cell type (disorder),y,descendant of concept mapped from leaf +92508006,Burkitt's tumor of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +764940002,Inherited acute myeloid leukemia (disorder),y,descendant of concept mapped from leaf +450910000,Anaplastic lymphoma kinase positive large B-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +93507009,"Hodgkin's disease, mixed cellularity of lymph nodes of inguinal region AND/OR lower limb (disorder)",y,descendant of concept mapped from leaf +404108003,Poikilodermatous mycosis fungoides (disorder),y,descendant of concept mapped from leaf +404149003,"Lymphoplasmacytic B-cell lymphoma, nodal/systemic with skin involvement (disorder)",y,descendant of concept mapped from leaf +404128004,CD-30 negative cutaneous T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +415286005,Refractory cytopenia with multilineage dysplasia and ringed sideroblasts (disorder),y,descendant of concept mapped from leaf +277597005,Myelodysplastic syndrome with isolated del(5q) (disorder),y,descendant of concept mapped from leaf +762691001,Classical Hodgkin lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +413841000,Chronic myeloid leukemia - category (morphologic abnormality),y,descendant of concept mapped from leaf +46744002,"Follicular lymphoma, grade 1 (morphologic abnormality)",y,descendant of concept mapped from leaf +398623004,Refractory anemia with excess blasts (disorder),y,descendant of concept mapped from leaf +95261008,Sézary's disease of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +721303001,Refractory neutropenia (disorder),y,descendant of concept mapped from leaf +450911001,Large B-cell lymphoma arising in human herpesvirus type 8 associated multicentric Castleman disease (morphologic abnormality),y,descendant of concept mapped from leaf +397469009,"Follicular lymphoma, diffuse follicle center cell sub-type, grade 2 (morphologic abnormality)",y,descendant of concept mapped from leaf +448372003,Non-Hodgkin's lymphoma of lung (disorder),y,descendant of concept mapped from leaf +724648008,Plasmablastic lymphoma (disorder),y,descendant of concept mapped from leaf +404116007,Mycosis fungoides with systemic infiltration (disorder),y,descendant of concept mapped from leaf +404140004,Primary cutaneous marginal zone B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +418265009,Primary cutaneous B-cell lymphoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +721308005,Acute leukemia of ambiguous lineage (disorder),y,descendant of concept mapped from leaf +93505001,"Hodgkin's disease, mixed cellularity of lymph nodes of axilla AND/OR upper limb (disorder)",y,descendant of concept mapped from leaf +84633001,Lymphoma stage IIIse (finding),y,descendant of concept mapped from leaf +426642002,"Erythroleukemia, FAB M6 in remission (disorder)",y,descendant of concept mapped from leaf +404117003,Spongiotic mycosis fungoides (disorder),y,descendant of concept mapped from leaf +721314003,Fibroblastic reticular cell neoplasm (disorder),y,descendant of concept mapped from leaf +449063007,Follicular non-Hodgkin's lymphoma of oral cavity (disorder),y,descendant of concept mapped from leaf +448213004,Diffuse non-Hodgkin's lymphoma of prostate (disorder),y,descendant of concept mapped from leaf +93203007,Malignant mast cell tumor of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +93537000,Hodgkin's granuloma of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +95260009,"Sézary's disease of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +397352006,"Primary cutaneous anaplastic large T-cell lymphoma, CD30-positive (morphologic abnormality)",y,descendant of concept mapped from leaf +94071006,Primary malignant neoplasm of spleen (disorder),y,descendant of concept mapped from leaf +92515003,Burkitt's tumor of spleen (disorder),y,descendant of concept mapped from leaf +93528000,Hodgkin's disease of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +415701004,T-cell AND/OR NK-cell neoplasm (morphologic abnormality),y,descendant of concept mapped from leaf +397340004,Acute myeloid leukemia with recurrent genetic abnormality (morphologic abnormality),y,descendant of concept mapped from leaf +448465000,Diffuse non-Hodgkin's lymphoma of testis (disorder),y,descendant of concept mapped from leaf +109996008,"Myelodysplastic syndrome: Refractory anemia, without ringed sideroblasts, without excess blasts (disorder)",y,descendant of concept mapped from leaf +103689001,"Acute myeloid leukemia, minimal differentiation (morphologic abnormality)",y,descendant of concept mapped from leaf +450955007,B lymphoblastic leukemia lymphoma with t(5;14)(q31;q32); IL3-IGH (morphologic abnormality),y,descendant of concept mapped from leaf +448555009,Lymphoma of body of stomach (disorder),y,descendant of concept mapped from leaf +128834007,Chronic neutrophilic leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +449292003,Non-Hodgkin's lymphoma of tonsil (disorder),y,descendant of concept mapped from leaf +713516007,Primary effusion lymphoma (disorder),y,descendant of concept mapped from leaf +239297008,Lymphomatoid granulomatosis of the lung (disorder),y,descendant of concept mapped from leaf +440422002,Asymptomatic multiple myeloma (disorder),y,descendant of concept mapped from leaf +404157000,Specific skin infiltration in Hodgkin's disease (disorder),y,descendant of concept mapped from leaf +449176003,Diffuse non-Hodgkin's lymphoma of intestine (disorder),y,descendant of concept mapped from leaf +419018000,Primary cutaneous large T-cell lymphoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +703818007,Acute monoblastic and monocytic leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +765328000,Classic mycosis fungoides (disorder),y,descendant of concept mapped from leaf +397358005,Aggressive systemic mastocytosis (morphologic abnormality),y,descendant of concept mapped from leaf +450913003,Mixed phenotype acute leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +93204001,"Malignant mast cell tumor of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +116821000119104,Non-Hodgkin lymphoma of central nervous system metastatic to lymph node of upper limb (disorder),y,descendant of concept mapped from leaf +109967007,"Diffuse non-Hodgkin's lymphoma, small cleaved cell (disorder)",y,descendant of concept mapped from leaf +119248009,Hyperalbuminemia (disorder),y,descendant of concept mapped from leaf +426955004,Philadelphia chromosome-positive acute lymphoblastic leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +255102004,Angioendotheliomatosis (disorder),y,descendant of concept mapped from leaf +103691009,Acute myeloid leukemia with maturation (morphologic abnormality),y,descendant of concept mapped from leaf +93199007,Malignant lymphoma of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +116811000119106,Non-Hodgkin lymphoma of central nervous system metastatic to lymph node of lower limb (disorder),y,descendant of concept mapped from leaf +415287001,Relapsing chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +763719001,Hydroa vacciniforme-like lymphoma (disorder),y,descendant of concept mapped from leaf +448220006,Non-Hodgkin's lymphoma of bone (disorder),y,descendant of concept mapped from leaf +61493004,Mu heavy chain disease (disorder),y,descendant of concept mapped from leaf +733081008,Reactive plasmacytic hyperplasia (morphologic abnormality),y,descendant of concept mapped from leaf +413990004,Diffuse large B-cell lymphoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +93489007,"Hodgkin's disease, lymphocytic depletion of lymph nodes of inguinal region AND/OR lower limb (disorder)",y,descendant of concept mapped from leaf +733917002,Pediatric follicular lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +128817004,Immunoglobulin deposition disease (morphologic abnormality),y,descendant of concept mapped from leaf +307649006,Microglioma (disorder),y,descendant of concept mapped from leaf +404141000,Primary cutaneous immunocytoma (disorder),y,descendant of concept mapped from leaf +128801005,Mediastinal large B-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +128935007,Lymphoid leukemia - category (morphologic abnormality),y,descendant of concept mapped from leaf +94690004,"Mixed cell type lymphosarcoma of lymph nodes of head, face, and neck (disorder)",y,descendant of concept mapped from leaf +447658000,Lymphoma of fundus of stomach (disorder),y,descendant of concept mapped from leaf +92510008,Burkitt's tumor of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +92817004,Chronic myeloid leukemia in remission (disorder),y,descendant of concept mapped from leaf +447806008,Lymphoma of cardia of stomach (disorder),y,descendant of concept mapped from leaf +94148006,Megakaryocytic leukemia in remission (disorder),y,descendant of concept mapped from leaf +128828000,"Acute myeloid leukemia, t(8;21) (q22;q22) (morphologic abnormality)",y,descendant of concept mapped from leaf +397343002,"Therapy-related acute myeloid leukemia and myelodysplastic syndrome, alkylating agent-related type (morphologic abnormality)",y,descendant of concept mapped from leaf +420519005,Malignant lymphoma of the eye region (disorder),y,descendant of concept mapped from leaf +703387000,Acute myeloid leukemia with normal karyotype (disorder),y,descendant of concept mapped from leaf +93488004,"Hodgkin's disease, lymphocytic depletion of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +448354009,Non-Hodgkin's lymphoma of intestine (disorder),y,descendant of concept mapped from leaf +92514004,Burkitt's tumor of lymph nodes of multiple sites (disorder),y,descendant of concept mapped from leaf +448371005,Non-Hodgkin's lymphoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +397349003,Nodal marginal zone B-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +75339006,Lymphoma stage III 2 (finding),y,descendant of concept mapped from leaf +1091891000000106,B-cell Hodgkin's lymphoma (disorder),y,descendant of concept mapped from leaf +419392005,Primary cutaneous lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +93152000,Leukemic reticuloendotheliosis of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +12311000132101,Refractory acute lymphoid leukemia (disorder),y,descendant of concept mapped from leaf +698646006,Acute monoblastic leukemia in remission (disorder),y,descendant of concept mapped from leaf +92512000,"Burkitt's tumor of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +450952005,B lymphoblastic leukemia lymphoma with t(12;21)(p13;q22); TEL-AML1 (ETV6-RUNX1) (morphologic abnormality),y,descendant of concept mapped from leaf +414785000,Multiple solitary plasmacytomas (disorder),y,descendant of concept mapped from leaf +128921005,"Plasmacytoma, extramedullary (not occurring in bone) (morphologic abnormality)",y,descendant of concept mapped from leaf +128825002,"Chronic myelogenous leukemia, BCR/ABL positive (morphologic abnormality)",y,descendant of concept mapped from leaf +188529007,Hodgkin's paragranuloma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +715664005,Interdigitating dendritic cell sarcoma (disorder),y,descendant of concept mapped from leaf +93200005,Malignant mast cell tumor of intra-abdominal lymph nodes (disorder),y,descendant of concept mapped from leaf +721305008,Acute myeloid leukemia due to recurrent genetic abnormality (disorder),y,descendant of concept mapped from leaf +404169008,Malignant histiocytosis involving skin (disorder),y,descendant of concept mapped from leaf +94715001,Mycosis fungoides of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +397348006,Precursor T cell lymphoblastic leukemia/lymphoblastic lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +448607004,Diffuse non-Hodgkin's lymphoma of uterine cervix (disorder),y,descendant of concept mapped from leaf +705061009,Childhood myelodysplastic syndrome (disorder),y,descendant of concept mapped from leaf +718200007,Primary pulmonary lymphoma (disorder),y,descendant of concept mapped from leaf +448865007,Follicular non-Hodgkin's lymphoma of skin (disorder),y,descendant of concept mapped from leaf +418628003,Follicular mycosis fungoides (morphologic abnormality),y,descendant of concept mapped from leaf +404123008,Leukemic infiltration of skin (T-cell prolymphocytic leukemia) (disorder),y,descendant of concept mapped from leaf +716789004,Epstein-Barr virus positive diffuse large B-cell lymphoma of elderly (morphologic abnormality),y,descendant of concept mapped from leaf +133751000119102,Lymphoma of colon (disorder),y,descendant of concept mapped from leaf +404107008,Patch/plaque stage mycosis fungoides (disorder),y,descendant of concept mapped from leaf +109972003,"Follicular non-Hodgkin's lymphoma, large cell (disorder)",y,descendant of concept mapped from leaf +426071002,Hodgkin's disease in remission (disorder),y,descendant of concept mapped from leaf +766045006,Acute myeloid leukemia and myelodysplastic syndrome related to alkylating agent (disorder),y,descendant of concept mapped from leaf +404142007,Primary cutaneous plasmacytoma (disorder),y,descendant of concept mapped from leaf +733627006,Primary cutaneous gamma-delta-positive T-cell lymphoma (disorder),y,descendant of concept mapped from leaf +188524002,Hodgkin's paragranuloma of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +421283008,Primary lymphoma of brain associated with acquired immunodeficiency syndrome (disorder),y,descendant of concept mapped from leaf +404112009,Granulomatous mycosis fungoides (disorder),y,descendant of concept mapped from leaf +448561007,Follicular non-Hodgkin's lymphoma of extranodal site (disorder),y,descendant of concept mapped from leaf +128818009,Acute biphenotypic leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +815121000000102,Follicular lymphoma grade 3a (morphologic abnormality),y,descendant of concept mapped from leaf +420063007,Sporadic Burkitt's lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +448995000,Follicular non-Hodgkin's lymphoma of central nervous system (disorder),y,descendant of concept mapped from leaf +12351000132102,"B-cell lymphoma, unclassifiable, with features intermediate between diffuse large B-cell lymphoma and Hodgkin lymphoma (morphologic abnormality)",y,descendant of concept mapped from leaf +20447006,Plasma cell dyscrasia with polyneuropathy (disorder),y,descendant of concept mapped from leaf +94711005,"Mycosis fungoides of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +53237008,"Anaplastic large cell lymphoma, T cell and Null cell type (morphologic abnormality)",y,descendant of concept mapped from leaf +422853008,Lymphoma of retroperitoneal space (disorder),y,descendant of concept mapped from leaf +427658007,"Acute myelomonocytic leukemia, FAB M4, in remission (disorder)",y,descendant of concept mapped from leaf +726721002,Nodal marginal zone B-cell lymphoma (disorder),y,descendant of concept mapped from leaf +449318001,Non-Hodgkin's lymphoma of prostate (disorder),y,descendant of concept mapped from leaf +277577000,Monoclonal gammopathy of uncertain significance (disorder),y,descendant of concept mapped from leaf +404122003,Leukemic infiltration of skin (chronic T-cell lymphocytic leukemia) (disorder),y,descendant of concept mapped from leaf +95209008,Plasma cell leukemia in remission (disorder),y,descendant of concept mapped from leaf +419283005,Primary cutaneous T-cell lymphoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +285423008,Immunoglobulin A monoclonal gammopathy of uncertain significance (disorder),y,descendant of concept mapped from leaf +128826001,"Atypical chronic myeloid leukemia, BCR/ABL negative (morphologic abnormality)",y,descendant of concept mapped from leaf +444911000,Acute myeloid leukemia with t(9:11)(p22;q23); MLLT3-MLL (disorder),y,descendant of concept mapped from leaf +419563005,"Primary cutaneous T-cell lymphoma, pleomorphic small/medium-sized (morphologic abnormality)",y,descendant of concept mapped from leaf +448447004,Non-Hodgkin's lymphoma of skin (disorder),y,descendant of concept mapped from leaf +419035001,Mature T-cell AND/OR natural killer-cell neoplasm (morphologic abnormality),y,descendant of concept mapped from leaf +764855007,Acute myeloid leukemia with CCAAT/enhancer binding protein alpha somatic mutation (disorder),y,descendant of concept mapped from leaf +703819004,Acute myeloid leukemia with mutated CEBPA (morphologic abnormality),y,descendant of concept mapped from leaf +93492006,"Hodgkin's disease, lymphocytic depletion of extranodal AND/OR solid organ site (disorder)",y,descendant of concept mapped from leaf +815131000000100,Follicular lymphoma grade 3b (morphologic abnormality),y,descendant of concept mapped from leaf +93533001,"Hodgkin's granuloma of lymph nodes of head, face AND/OR neck (disorder)",y,descendant of concept mapped from leaf +92516002,Burkitt's tumor of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +413836008,Chronic eosinophilic leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +12301000132103,Acute lymphoid leukemia relapse (disorder),y,descendant of concept mapped from leaf +93498005,"Hodgkin's disease, lymphocytic-histiocytic predominance of lymph nodes of inguinal region AND/OR lower limb (disorder)",y,descendant of concept mapped from leaf +93202002,Malignant mast cell tumor of intrathoracic lymph nodes (disorder),y,descendant of concept mapped from leaf +402882001,Hodgkin's disease affecting skin (disorder),y,descendant of concept mapped from leaf +448387008,Non-Hodgkin's lymphoma of testis (disorder),y,descendant of concept mapped from leaf +425749006,Subacute myeloid leukemia in remission (disorder),y,descendant of concept mapped from leaf +703626001,"Anaplastic large cell lymphoma, T/Null cell, primary systemic type (disorder)",y,descendant of concept mapped from leaf +93534007,Hodgkin's granuloma of lymph nodes of inguinal region AND/OR lower limb (disorder),y,descendant of concept mapped from leaf +109998009,Refractory anemia with ringed sideroblasts (disorder),y,descendant of concept mapped from leaf +721762007,Adult T-cell leukemia/lymphoma of skin (disorder),y,descendant of concept mapped from leaf +450951003,B lymphoblastic leukemia lymphoma with t(v;11q23); MLL rearranged (morphologic abnormality),y,descendant of concept mapped from leaf +93510002,"Hodgkin's disease, mixed cellularity of extranodal AND/OR solid organ site (disorder)",y,descendant of concept mapped from leaf +448560008,Diffuse non-Hodgkin's lymphoma of extranodal site (disorder),y,descendant of concept mapped from leaf +115244002,Malignant lymphoma - category (morphologic abnormality),y,descendant of concept mapped from leaf +441962003,Large cell lymphoma of intrapelvic lymph nodes (disorder),y,descendant of concept mapped from leaf +58961005,Lethal midline granuloma (disorder),y,descendant of concept mapped from leaf +94704006,Multiple myeloma in remission (disorder),y,descendant of concept mapped from leaf +307340003,Monosomy 7 syndrome (disorder),y,descendant of concept mapped from leaf +733860007,Pediatric nodal marginal zone lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +187822008,Fibrosarcoma of spleen (disorder),y,descendant of concept mapped from leaf +128934006,Myeloid leukemia - category (morphologic abnormality),y,descendant of concept mapped from leaf +399648005,Intravascular large B-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +734067001,Splenic diffuse red pulp small B-cell lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +404129007,CD-30 negative anaplastic large T-cell cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +723889003,B lymphoblastic leukemia lymphoma with t(9:22) (q34;q11.2); BCR-ABL 1 (disorder),y,descendant of concept mapped from leaf +703821009,T lymphoblastic leukemia/lymphoma (morphologic abnormality),y,descendant of concept mapped from leaf +128829008,"Acute myeloid leukemia, 11q23 abnormalities (morphologic abnormality)",y,descendant of concept mapped from leaf +93546006,Hodgkin's paragranuloma of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +371134001,"Malignant lymphoma, large cell, polymorphous, immunoblastic (disorder)",y,descendant of concept mapped from leaf +93141006,Letterer-Siwe disease of extranodal AND/OR solid organ site (disorder),y,descendant of concept mapped from leaf +413656006,Blastic phase chronic myeloid leukemia (disorder),y,descendant of concept mapped from leaf +447805007,Lymphoma of greater curvature of stomach (disorder),y,descendant of concept mapped from leaf +128819001,T-cell large granular lymphocytic leukemia (morphologic abnormality),y,descendant of concept mapped from leaf +404130002,CD-30 negative pleomorphic large T-cell cutaneous lymphoma (disorder),y,descendant of concept mapped from leaf +448666006,Follicular non-Hodgkin's lymphoma of bone (disorder),y,descendant of concept mapped from leaf +127220001,Malignant lymphoma of lymph nodes (disorder),y,descendant of concept mapped from leaf +93541001,Hodgkin's paragranuloma of lymph nodes of axilla AND/OR upper limb (disorder),y,descendant of concept mapped from leaf +397468001,"Follicular lymphoma, diffuse follicle center sub-type, grade 1 (morphologic abnormality)",y,descendant of concept mapped from leaf +91854005,Acute leukemia in remission (disorder),y,descendant of concept mapped from leaf +397341000,Acute myeloid leukemia with multilineage dysplasia following a myelodysplastic syndrome or myelodysplastic syndrome/myeloproliferative disorder (morphologic abnormality),y,descendant of concept mapped from leaf +448609001,Diffuse non-Hodgkin's lymphoma of ovary (disorder),y,descendant of concept mapped from leaf +713325002,Primary cerebral lymphoma co-occurrent with human immunodeficiency virus infection (disorder),y,descendant of concept mapped from leaf +404124002,Leukemic infiltration of skin (T-cell lymphoblastic leukemia) (disorder),y,descendant of concept mapped from leaf +189972001,"[M]Malignant lymphoma, lymphocytic, poorly differentiated NOS (morphologic abnormality)",n,via Query Table +189968000,"[M]Malignant lymphoma, lymphocytic, well differentiated NOS (morphologic abnormality)",n,via Query Table +189970009,"[M]Malignant lymphoma, centrocytic (morphologic abnormality)",n,via Query Table +815101000000106,"Follicular lymphoma, grade 1 (morphologic abnormality)",n,via Query Table +662451000000101,Sézary's disease NOS (disorder),n,via Query Table +397346005,Acute bilineal leukemia (morphologic abnormality),n,via Query Table +468691000000106,[M]Other myeloid leukaemia NOS (morphologic abnormality),n,via Query Table +833001000000103,Diffuse follicle centre lymphoma,n,via Query Table +190164006,"[X]Malignant neoplasm of lymphoid, hematopoietic and related tissue, unspecified (disorder)",n,via Query Table +26328002,Disseminated eosinophilic collagen disease (disorder),n,via Query Table +662421000000106,Acute leukemia NOS (disorder),n,via Query Table +190025005,[M]leukemia NOS (morphologic abnormality),n,via Query Table +190167004,[X]Unspecified B-cell non-Hodgkin's lymphoma (disorder),n,via Query Table +190045002,[M]Lymphosarcoma cell leukemia (morphologic abnormality),n,via Query Table +190054004,[M]Eosinophilic leukemias (morphologic abnormality),n,via Query Table +615441000000105,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of lymph nodes of inguinal region and lower limb (disorder),n,via Query Table +832681000000105,T-cell prolymphocytic leukaemia,n,via Query Table +189997002,"[M]Malignant lymphoma, lymphocytic, intermediate differentiation, nodular (morphologic abnormality)",n,via Query Table +832921000000100,5Q minus syndrome,n,via Query Table +188619006,"Mycosis fungoides of the lymph nodes of head, face and neck (disorder)",n,via Query Table +450041000000102,[X]Other Hodgkin's disease (disorder),n,via Query Table +471231000000108,"[M]Malignant lymphoma, mixed lymphocytic - histiocytic NOS (& [diffuse reticulolymphosarcoma])",n,via Query Table +473041000000109,"[M]Malignant lymphoma, lymphocytic, intermediate differentiation, nodular (morphologic abnormality)",n,via Query Table +188759000,Lymphosarcoma cell leukemia (disorder),n,via Query Table +190075007,[M]Monocytoid B-cell lymphoma (morphologic abnormality),n,via Query Table +815091000000103,Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue [MALT-lymphoma] (disorder),n,via Query Table +573341000000101,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of unspecified site (disorder),n,via Query Table +833581000000104,Non-Hodgkin's lymphoma - disorder,n,via Query Table +127221002,Hematologic malignancy (disorder),n,via Query Table +190022008,[M]Burkitt's tumors (morphologic abnormality),n,via Query Table +615431000000101,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of lymph nodes of axilla and upper limb (disorder),n,via Query Table +189980008,"[M]Malignant lymphoma, small cell, non-cleaved, diffuse (morphologic abnormality)",n,via Query Table +237759003,"Langerhans cell histiocytosis, unifocal, bone (disorder)",n,via Query Table +461871000000101,"[M]Lymphomas, NOS or diffuse (morphologic abnormality)",n,via Query Table +399607007,Chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality),n,via Query Table +863751000000106,Clinical stage A chronic lymphocytic leukaemia ,n,via Query Table +188623003,Mycosis fungoides of lymph nodes of axilla and upper limb (disorder),n,via Query Table +455781000000101,[X]Unspecified B-cell non-Hodgkin's lymphoma (disorder),n,via Query Table +556221000000107,Malignant neoplasms of lymphoid and histiocytic tissue NOS (disorder),n,via Query Table +338011000000108,Mucosa-associated lymphoma,n,via Query Table +541031000000105,Hodgkin's lymphocytic depletion of unspecified site (disorder),n,via Query Table +833381000000105,Follicular lymphoma grade 3b,n,via Query Table +233693005,Pulmonary histiocytosis X (disorder),n,via Query Table +134177009,"[M]Hodgkin's disease, lymphocytic depletion NOS (morphologic abnormality)",n,via Query Table +190004005,[M]Mycosis fungoides NOS (morphologic abnormality),n,via Query Table +127216000,Angioimmunoblastic lymphadenopathy with dysproteinemia (disorder),n,via Query Table +477871000000103,[X]Other types of diffuse non-Hodgkin's lymphoma (disorder),n,via Query Table +867941000000102,[M]Juvenile myelomonocytic leukaemia ,n,via Query Table +190007003,[M]Histiocytic medullary reticulosis (morphologic abnormality),n,via Query Table +863771000000102,Clinical stage B chronic lymphocytic leukaemia ,n,via Query Table +633331000000104,"Histiocytosis, unspecified (disorder)",n,via Query Table +190162005,[X]Other leukemia of unspecified cell type (disorder),n,via Query Table +443641000000102,[M]Subacute lymphoid leukaemia,n,via Query Table +565971000000101,Malignant lymphoma NOS of lymph nodes of multiple sites (disorder),n,via Query Table +464771000000108,"[X]Other specified malignant neoplasms of lymphoid, haematopoietic and related tissue (disorder)",n,via Query Table +812871000000103,Juvenile myelomonocytic leukaemia (disorder),n,via Query Table +833361000000101,Follicular lymphoma grade 3,n,via Query Table +89706008,AIDS with Burkitt's tumor (disorder),n,via Query Table +188657006,Letterer-Siwe disease of lymph nodes of axilla and upper limb (disorder),n,via Query Table +833391000000107,Cutaneous follicle centre lymphoma,n,via Query Table +189974000,"[M]Malignant lymphoma, centroblastic type NOS (morphologic abnormality)",n,via Query Table +274907000,Plasma cell tumor (morphologic abnormality),n,via Query Table +472871000000100,[M] Gamma heavy chain disease (morphologic abnormality),n,via Query Table +457571000000102,[M]Subacute myeloid leukaemia (morphologic abnormality),n,via Query Table +254042000,Ayala's disease (disorder),n,via Query Table +398701000000101,[M]Basophilic leukaemias (morphologic abnormality),n,via Query Table +190009000,[M] Alpha heavy chain disease (morphologic abnormality),n,via Query Table +408661000000101,[X]Other specified types of non-Hodgkin's lymphoma (disorder),n,via Query Table +95262001,Sézary's disease of lymph nodes of multiple sites (disorder),n,via Query Table +571191000000109,Other myeloid leukemia (disorder),n,via Query Table +478121000000109,"[M]Lymphoma, diffuse or NOS (morphologic abnormality)",n,via Query Table +815141000000109,"Follicular lymphoma, cutaneous follicle centre (morphologic abnormality)",n,via Query Table +578481000000105,"Hodgkin's, lymphocytic-histiocytic predominance NOS (disorder)",n,via Query Table +539581000000102,"Hodgkin's disease, lymphocytic depletion NOS (disorder)",n,via Query Table +397121000000107,[M]Eosinophilic leukaemias (morphologic abnormality),n,via Query Table +189960007,"[M]Malignant lymphoma, diffuse NOS (morphologic abnormality)",n,via Query Table +190050008,[M]Neutrophilic leukemia (morphologic abnormality),n,via Query Table +190073000,Chronic lymphoproliferative disease (morphologic abnormality),n,via Query Table +408771000000104,[M]Compound leukaemia (morphologic abnormality),n,via Query Table +469881000000100,"[X]Diffuse non-Hodgkin's lymphoma, unspecified (disorder)",n,via Query Table +578251000000103,Malignant mast cell tumor NOS (disorder),n,via Query Table +134176000,"[M]Malignant lymphoma, small cleaved cell, diffuse (morphologic abnormality)",n,via Query Table +450181000000109,"[M]Malignant lymphoma, small cell, non-cleaved, diffuse (morphologic abnormality)",n,via Query Table +93148000,"Leukemic reticuloendotheliosis of lymph nodes of head, face AND/OR neck (disorder)",n,via Query Table +422052002,Burkitt's lymphoma associated with acquired immunodeficiency syndrome (disorder),n,via Query Table +188528004,Hodgkin's paragranuloma of lymph nodes of inguinal region and lower limb (disorder),n,via Query Table +833021000000107,Other types of follicular non-Hodgkin's lymphoma,n,via Query Table +190151005,"[X]Malignant neoplasms of lymphoid, hematopoietic and related tissue (disorder)",n,via Query Table +571181000000107,Myeloid sarcoma NOS (disorder),n,via Query Table +6426003,Autosomal dominant analbuminemia (disorder),n,via Query Table +190013007,[M]Angioendotheliomatosis (morphologic abnormality),n,via Query Table +312939009,Ocular lymphoma (disorder),n,via Query Table +441161000000109,"[M]Malignant lymphoma, follicular centre cell NOS (morphologic abnormality)",n,via Query Table +433141000000108,"[M]Malignant lymphoma, centrocytic (morphologic abnormality)",n,via Query Table +190069003,[M]Acute myelofibrosis (morphologic abnormality),n,via Query Table +285763005,Acute myeloblastic leukemia - undifferentiated (disorder),n,via Query Table +541011000000102,Hodgkin's sarcoma NOS (disorder),n,via Query Table +277608004,"Hodgkin's disease, lymphocytic predominance - nodular (disorder)",n,via Query Table +438251000000108,"[M]leukemia unspecified, NOS (morphologic abnormality)",n,via Query Table +389361000000109,[M]Erythroleukemias (morphologic abnormality),n,via Query Table +190052000,[M]Basophilic leukemias (morphologic abnormality),n,via Query Table +189977007,"[M]Malignant lymphoma, large cell, cleaved, diffuse (morphologic abnormality)",n,via Query Table +557641000000101,Reticulosarcoma of unspecified site (disorder),n,via Query Table +190018003,"Plasma cell tumor, malignant (morphologic abnormality)",n,via Query Table +438691000000102,[M]Monocytoid B-cell lymphoma (morphologic abnormality),n,via Query Table +413526008,"Anaplastic large cell lymphoma, T/Null cell, primary cutaneous type (morphologic abnormality)",n,via Query Table +662431000000108,Chronic leukemia NOS (disorder),n,via Query Table +390401000000107,[X]Other specified leukaemias (disorder),n,via Query Table +190166008,[X]Other and unspecified peripheral and cutaneous T-cell lymphomas (disorder),n,via Query Table +189967005,"[M]Malignant lymphoma, follicular center cell NOS (morphologic abnormality)",n,via Query Table +438681000000104,"[M]Malignant lymphoma, large cell, cleaved, diffuse (morphologic abnormality)",n,via Query Table +190070002,[M]Miscellaneous leukemia NOS (morphologic abnormality),n,via Query Table +557491000000109,Letterer-Siwe disease NOS (disorder),n,via Query Table +403911000000104,"[M]Hodgkin,s disease, nodular sclerosis, mixed cellularity (morphologic abnormality)",n,via Query Table +95258007,Sézary's disease of intrathoracic lymph nodes (disorder),n,via Query Table +186723002,Human immunodeficiency virus disease resulting in Burkitt's lymphoma (disorder),n,via Query Table +833481000000100,[M]Adult T-cell leukaemia/lymphoma,n,via Query Table +450971000000109,[M]leukemias unspecified (morphologic abnormality),n,via Query Table +478111000000103,"[M]Malignant lymphoma, large cell, non-cleaved, diffuse (morphologic abnormality)",n,via Query Table +833081000000108,"Refractory anaemia without sideroblasts, so stated",n,via Query Table +462401000000104,"[X]Malignant neoplasms of lymphoid, haematopoietic and related tissue (disorder)",n,via Query Table +93450001,Erythroleukemia in remission (disorder),n,via Query Table +832691000000107,Heavy chain disease,n,via Query Table +578441000000102,Hodgkin's paragranuloma NOS (disorder),n,via Query Table +477841000000109,[M]Compound leukaemia NOS (morphologic abnormality),n,via Query Table +479021000000100,[M]Subacute leukaemia NOS (morphologic abnormality),n,via Query Table +833401000000105,[M]Letterer - Siwe disease,n,via Query Table +431831000000105,[M]Acute lymphoid leukaemia,n,via Query Table +269499001,Neoplasm of uncertain behavior of plasma cells (disorder),n,via Query Table +471831000000107,[M]Hodgkin's disease NOS,n,via Query Table +833141000000104,Enteropathy-associated T-cell lymphoma,n,via Query Table +673771000000103,Plasmacytoma NOS (disorder),n,via Query Table +757251000000101,Diffuse malignant lymphoma - large cell,n,via Query Table +815011000000107,Anaplastic lymphoma kinase positive anaplastic large cell lymphoma (disorder),n,via Query Table +401121000000109,[X]Unspecified B-cell non-Hodgkin's lymphoma,n,via Query Table +833411000000107,Sarcoma of dendritic cells,n,via Query Table +833501000000109,Primary cutaneous CD30 antigen positive large T-cell lymphoma,n,via Query Table +574421000000103,Other immunoproliferative neoplasms (disorder),n,via Query Table +190002009,"[M]Lymphoma, nodular or follicular NOS (morphologic abnormality)",n,via Query Table +472961000000101,[M]Aleukaemic lymphoid leukaemia (morphologic abnormality),n,via Query Table +409571000000100,"[X]Diffuse non-Hodgkin's lymphoma, unspecified (disorder)",n,via Query Table +390261000000107,[M]Eosinophilic leukaemia NOS (morphologic abnormality),n,via Query Table +480071000000101,"[M]Malignant lymphoma, follicular centre cell, cleaved NOS (morphologic abnormality)",n,via Query Table +573471000000101,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of spleen (disorder),n,via Query Table +188651007,Leukemic reticuloendotheliosis of spleen (disorder),n,via Query Table +634631000000105,Other monocytic leukemia NOS (disorder),n,via Query Table +84350008,AIDS with immunoblastic sarcoma (disorder),n,via Query Table +815671000000108,"Extranodal NK/T-cell lymphoma, nasal type (disorder)",n,via Query Table +557501000000103,Mast cell malignancy of unspecified site (disorder),n,via Query Table +188527009,Hodgkin's paragranuloma of lymph nodes of axilla and upper limb (disorder),n,via Query Table +833631000000102,Cutaneous/peripheral T-cell lymphoma,n,via Query Table +190035004,[M]Subacute lymphoid leukemia (morphologic abnormality),n,via Query Table +578281000000109,Malignant lymphoma NOS of intrathoracic lymph nodes (disorder),n,via Query Table +849141000000100,Adult T-cell leukemia/lymphoma (disorder),n,via Query Table +464261000000109,[M]Mycosis fungoides NOS (morphologic abnormality),n,via Query Table +190047005,[M]Myeloid leukemias (morphologic abnormality),n,via Query Table +463091000000106,[M] Peripheral T-cell lymphoma NOS (morphologic abnormality),n,via Query Table +466481000000108,"[M]Hodgkin's disease, nodular sclerosis NOS (morphologic abnormality)",n,via Query Table +389231000000105,[M]Plasma cell tumours (morphologic abnormality),n,via Query Table +419471000000104,[M]Lymphosarcoma cell leukaemia,n,via Query Table +416501000000103,"[M]Malignant lymphoma, lymphocytic, well differentiated NOS (morphologic abnormality)",n,via Query Table +389731000000103,[M]Miscellaneous leukaemias (morphologic abnormality),n,via Query Table +189975004,"[M]Malignant lymphoma, follicular center cell, non-cleaved NOS (morphologic abnormality)",n,via Query Table +395671000000107,[M] Alpha heavy chain disease (morphologic abnormality),n,via Query Table +573381000000109,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of intra-abdominal lymph nodes (disorder),n,via Query Table +188521005,Hodgkin's paragranuloma (disorder),n,via Query Table +814981000000100,"Anaplastic large cell lymphoma, ALK-negative (disorder)",n,via Query Table +190029004,"[M]leukemia unspecified, NOS (morphologic abnormality)",n,via Query Table +190051007,[M]Other myeloid leukemia NOS (morphologic abnormality),n,via Query Table +403961000000102,[M]Neutrophilic leukaemia (morphologic abnormality),n,via Query Table +578451000000104,Hodgkin's granuloma of unspecified site (disorder),n,via Query Table +546321000000103,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of lymph nodes of multiple sites (disorder),n,via Query Table +190067001,[M]Acute megakaryoblastic leukemia (morphologic abnormality),n,via Query Table +438671000000101,"[M]Malignant lymphoma, centroblastic type NOS (morphologic abnormality)",n,via Query Table +815161000000105,Sarcoma of dendritic cells (accessory cells) (disorder),n,via Query Table +190222001,[X]Neoplasm of uncertain and unknown behavior of other myelodysplastic syndromes (disorder),n,via Query Table +833101000000102,Anaplastic lymphoma kinase positive anaplastic large cell lymphoma,n,via Query Table +390651000000106,[X]Neoplasm of uncertain and unknown behaviour of other myelodysplastic syndromes (disorder),n,via Query Table +833601000000108,Non-Hodgkin's lymphoma - disorder,n,via Query Table +94149003,"Acute megakaryoblastic leukemia, FAB M7 (disorder)",n,via Query Table +815681000000105,Subcutaneous panniculitic T-cell lymphoma (disorder),n,via Query Table +420441000000109,[M]Acute myelofibrosis (morphologic abnormality),n,via Query Table +269478004,Chronic erythremia (disorder),n,via Query Table +833541000000107,Subcutaneous panniculitic T-cell lymphoma,n,via Query Table +634641000000101,Monocytic leukemia NOS (disorder),n,via Query Table +190026006,[M]Subacute leukemia NOS (morphologic abnormality),n,via Query Table +833521000000100,Cutaneous lymphoma,n,via Query Table +401561000000106,[M]Monocytoid B-cell lymphoma,n,via Query Table +189991001,[M]Hodgkin's paragranuloma (morphologic abnormality),n,via Query Table +189976003,[M]Malignant lymphomatous polyposis (morphologic abnormality),n,via Query Table +833461000000109,Acute myeloid leukaemia with myelodysplasia-related changes,n,via Query Table +415461000000108,[M]Malignant lymphomatous polyposis (morphologic abnormality),n,via Query Table +359626007,"Acute myelogenous leukemia without differentiation, FAB M0 (disorder)",n,via Query Table +539731000000105,Mycosis fungoides of unspecified site (disorder),n,via Query Table +473031000000100,"[M]Malignant lymphoma, centroblastic-centrocytic, follicular (morphologic abnormality)",n,via Query Table +573361000000100,"Unspecified malignant neoplasm of lymphoid and histiocytic tissue of lymph nodes of head, face and neck (disorder)",n,via Query Table +397451000000107,"[X]Malignant neoplasm of lymphoid, haematopoietic and related tissue, unspecified (disorder)",n,via Query Table +189969008,"[M]Malignant lymphoma, lymphocytic, intermediate differentiation NOS (morphologic abnormality)",n,via Query Table +188636003,Sezary's disease of spleen (disorder),n,via Query Table +833621000000104,Cutaneous/peripheral T-cell lymphoma,n,via Query Table +410671000000109,"[M]Malignant lymphoma, lymphocytic, intermediate differentiation NOS (morphologic abnormality)",n,via Query Table +134179007,[M]Malignant histiocytosis (morphologic abnormality),n,via Query Table +389761000000108,"[X]Myelodysplastic syndrome, unspecified (disorder)",n,via Query Table +399081000000101,"[M]Malignant lymphoma, mixed lymphocytic-histiocytic NOS (morphologic abnormality)",n,via Query Table +477851000000107,[M]Lymphoid leukaemias (morphologic abnormality),n,via Query Table +309831004,[M]Hodgkin's disease NOS (morphologic abnormality),n,via Query Table +134178004,"[M]Hodgkin's disease, nodular sclerosis NOS (morphologic abnormality)",n,via Query Table +833641000000106,[M]Plasmacytoma NOS,n,via Query Table +428971000000106,"[M]Lymphogranuloma, malignant (morphologic abnormality)",n,via Query Table +539701000000104,Nodular lymphoma of unspecified site (disorder),n,via Query Table +455391000000100,[M]Hodgkin's disease NOS (& [lymphogranuloma malignant]),n,via Query Table +445691000000108,[M]Myeloid leukaemias (morphologic abnormality),n,via Query Table +832661000000101,B-cell chronic lymphocytic leukaemia,n,via Query Table +573431000000103,Reticulosarcoma or lymphosarcoma NOS (disorder),n,via Query Table +833171000000105,Mantle cell lymphoma,n,via Query Table +203436008,Osteoporosis in multiple myelomatosis (disorder),n,via Query Table +409691000000100,[M]Aleukaemic leukaemia NOS (morphologic abnormality),n,via Query Table +541021000000108,"Hodgkin's disease, mixed cellularity NOS (disorder)",n,via Query Table +398271000000103,"[M]Malignant lymphoma, follicular centre cell, non-cleaved, follicular (morphologic abnormality)",n,via Query Table +404146005,Primary cutaneous diffuse large cell B-cell lymphoma of the leg (disorder),n,via Query Table +815271000000105,"Chronic myeloid leukaemia, BCR/ABL-positive (morphologic abnormality)",n,via Query Table +875231000000102,Monoclonal gammopathy of uncertain significance,n,via Query Table +190016004,[M]Plasma cell tumors (morphologic abnormality),n,via Query Table +425131000000103,[M]Acute megakaryoblastic leukaemia (morphologic abnormality),n,via Query Table +189998007,"[M]Malignant lymphoma, follicular center cell, cleaved, follicular (morphologic abnormality)",n,via Query Table +565911000000106,Malignant lymphoma NOS of intra-abdominal lymph nodes (disorder),n,via Query Table +396201000000105,"[M]Malignant lymphoma, undifferentiated cell type NOS (morphologic abnormality)",n,via Query Table +832671000000108,B-cell prolymphocytic leukaemia,n,via Query Table +462371000000101,"[X]Refractory anemia, unspecified (disorder)",n,via Query Table +190056002,[M]Eosinophilic leukemia NOS (morphologic abnormality),n,via Query Table +832821000000105,Follicular non-Hodgkin's lymphoma,n,via Query Table +190048000,[M]Subacute myeloid leukemia (morphologic abnormality),n,via Query Table +190063002,[M]Miscellaneous leukemias (morphologic abnormality),n,via Query Table +833491000000103,Malignant lymphoma - lymphoblastic,n,via Query Table +433531000000109,"[M]Malignant lymphoma, centroblastic-centrocytic, diffuse (morphologic abnormality)",n,via Query Table +832611000000103,"Hodgkin's disease, mixed cellularity",n,via Query Table +833591000000102,Low grade B-cell lymphoma,n,via Query Table +391381000000100,[M]Histiocytic medullary reticulosis (morphologic abnormality),n,via Query Table +402761000000108,"[X]Refractory anaemia, unspecified",n,via Query Table +833611000000105,[M]AngiocentricT-cell lymphoma,n,via Query Table +705141000000109,Sézary's disease of unspecified site (disorder),n,via Query Table +833511000000106,True histiocytic lymphoma,n,via Query Table +307652003,Idiopathic thrombocythemia (disorder),n,via Query Table +421835000,Immunoblastic lymphoma associated with acquired immunodeficiency syndrome (disorder),n,via Query Table +410571000000108,[M]Miscellaneous leukaemia NOS (morphologic abnormality),n,via Query Table +15118008,AIDS with reticulosarcoma (disorder),n,via Query Table +557661000000100,Malignant lymphoma NOS of spleen (disorder),n,via Query Table +95259004,Sézary's disease of lymph nodes of axilla AND/OR upper limb (disorder),n,via Query Table +578501000000101,"Hodgkin's disease, nodular sclerosis NOS (disorder)",n,via Query Table +832641000000102,Hodgkin's disease,n,via Query Table +189999004,"[M]Malignant lymphoma, lymphocytic, poorly differentiated, nodular (morphologic abnormality)",n,via Query Table +573441000000107,Hodgkin's paragranuloma of unspecified site (disorder),n,via Query Table +443951000000105,"[M]Malignant lymphoma, nodular NOS (& [Brill - Symmers' disease])",n,via Query Table +557691000000106,Burkitt's lymphoma of unspecified site (disorder),n,via Query Table +832521000000108,Acute monoblastic leukaemia,n,via Query Table +832591000000106,"Hodgkin's disease, lymphocytic predominance - nodular",n,via Query Table +189510008,Refractory anemia with sideroblasts (disorder),n,via Query Table +188526000,Hodgkin's paragranuloma of intra-abdominal lymph nodes (disorder),n,via Query Table +271385002,"[X]Non-Hodgkin's lymphoma, unspecified type (disorder)",n,via Query Table +477541000000106,[X]Other myeloid leukaemia (morphologic abnormality),n,via Query Table +271486002,Acute erythremia and erythroleukemia (disorder),n,via Query Table +190006007,[M]Microglioma (morphologic abnormality),n,via Query Table +189973006,[M]Prolymphocytic lymphosarcoma (morphologic abnormality),n,via Query Table +634601000000104,Other myeloid leukemia NOS (disorder),n,via Query Table +557651000000103,Reticulosarcoma NOS (disorder),n,via Query Table +190033006,[M]Lymphoid leukemias (morphologic abnormality),n,via Query Table +93147005,Leukemic reticuloendotheliosis of lymph nodes of axilla AND/OR upper limb (disorder),n,via Query Table +401221000000100,[M]Malignant histiocytosis (morphologic abnormality),n,via Query Table +555741000000104,Malignant histiocytosis of unspecified site (disorder),n,via Query Table +638271000000102,Macroglobulinemia NOS (disorder),n,via Query Table +269509006,"[M]Lymphogranuloma, malignant (morphologic abnormality)",n,via Query Table +189966001,"[M]Malignant lymphoma, centroblastic-centrocytic, diffuse (morphologic abnormality)",n,via Query Table +359636004,"Acute myelogenous leukemia without maturation, FAB M1 (disorder)",n,via Query Table +574411000000109,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of intrapelvic lymph nodes (disorder),n,via Query Table +449751000000106,[M]Angioendotheliomatosis (morphologic abnormality),n,via Query Table +815191000000104,"Atypical chronic myeloid leukaemia, BCR/ABL-negative (morphologic abnormality)",n,via Query Table +189978002,"[M]Malignant lymphoma, large cell, non-cleaved, diffuse (morphologic abnormality)",n,via Query Table +833341000000102,Follicular lymphoma grade 1,n,via Query Table +461881000000104,[M]Plasma cell leukaemias (morphologic abnormality),n,via Query Table +404031000000109,[M]Aleukaemic myeloid leukaemia (morphologic abnormality),n,via Query Table +391691000000109,[M]Prolymphocytic lymphosarcoma (morphologic abnormality),n,via Query Table +396711000000103,"[M]Malignant lymphoma, lymphocytic, poorly differentiated, nodular (morphologic abnormality)",n,via Query Table +833441000000108,"Atypical chronic myeloid leukaemia, BCR/ABL negative",n,via Query Table +190012002,[M] Large cell lymphoma (morphologic abnormality),n,via Query Table +457421000000102,"[M]Malignant lymphoma, lymphocytic, well differentiated, nodular (morphologic abnormality)",n,via Query Table +188656002,"Letterer-Siwe disease of lymph nodes of head, face and neck (disorder)",n,via Query Table +640511000000108,Malignant lymphoma NOS (disorder),n,via Query Table +832531000000105,Juvenile myelomonocytic leukaemia,n,via Query Table +277600006,Acute myeloblastic leukemia (disorder),n,via Query Table +190046001,[M]Lymphosarcoma cell leukemia NOS (morphologic abnormality),n,via Query Table +541891000000101,Lymphosarcoma of unspecified site (disorder),n,via Query Table +277648007,Angiocentric T-cell lymphoma (disorder),n,via Query Table +450981000000106,[M]leukemia NOS (morphologic abnormality),n,via Query Table +833111000000100,Refractory anaemia with multilineage dysplasia,n,via Query Table +463341000000103,[M]Basophilic leukaemia NOS (morphologic abnormality),n,via Query Table +565961000000108,Malignant lymphoma NOS of intrapelvic lymph nodes (disorder),n,via Query Table +453011000000105,[M]Lymphosarcoma cell leukaemia NOS (morphologic abnormality),n,via Query Table +833531000000103,"Extranodal natural killer/T-cell lymphoma, nasal type",n,via Query Table +190032001,[M]Compound leukemia NOS (morphologic abnormality),n,via Query Table +188624009,Mycosis fungoides of lymph nodes of inguinal region and lower limb (disorder),n,via Query Table +541691000000102,Malignant histiocytosis NOS (disorder),n,via Query Table +190024009,[M]leukemias unspecified (morphologic abnormality),n,via Query Table +189993003,"Lymphoma, nodular or follicular (morphologic abnormality)",n,via Query Table +456651000000108,[M]Leukaemia NOS,n,via Query Table +189990000,"[M]Hodgkin's disease, nodular sclerosis, mixed cellularity (morphologic abnormality)",n,via Query Table +285768001,Acute myeloblastic leukemia with maturation (disorder),n,via Query Table +833451000000106,"Chronic myelogenous leukaemia, BCR/ABL positive",n,via Query Table +36449005,Acute erythremia (morphologic abnormality),n,via Query Table +190165007,"[X]Diffuse non-Hodgkin's lymphoma, unspecified (disorder)",n,via Query Table +389331000000104,"[M]Malignant lymphoma, convoluted cell type NOS (morphologic abnormality)",n,via Query Table +191333009,Essential thrombocytosis (disorder),n,via Query Table +429221000000106,[M]Hodgkin's disease NOS (morphologic abnormality),n,via Query Table +190028007,[M]Aleukemic leukemia NOS (morphologic abnormality),n,via Query Table +277576009,Plasma cell disorder (disorder),n,via Query Table +189995005,"[M]Malignant lymphoma, centroblastic-centrocytic, follicular (morphologic abnormality)",n,via Query Table +457051000000103,"[M]Hodgkin,s disease, lymphocytic predominance, diffuse (morphologic abnormality)",n,via Query Table +443501000000104,[M]Subacute myeloid leukaemia (disorder),n,via Query Table +417681000000107,"[X]Non-Hodgkin's lymphoma, unspecified type",n,via Query Table +189989009,"[M]Hodgkin's disease, lymphocytic predominance, diffuse (morphologic abnormality)",n,via Query Table +634611000000102,Myeloid leukemia NOS (disorder),n,via Query Table +832811000000104,Primary mediastinal (thymic) large B-cell lymphoma,n,via Query Table +634621000000108,Other monocytic leukemia (disorder),n,via Query Table +815311000000105,Acute myeloid leukemia with myelodysplasia-related changes (disorder),n,via Query Table +815451000000102,Primary cutaneous CD30 antigen positive large T-cell lymphoma (disorder),n,via Query Table +425221000000109,[M]Burkitt's tumour NOS (morphologic abnormality),n,via Query Table +78010001,"Malignant lymphoma, large B-cell, diffuse, immunoblastic (morphologic abnormality)",n,via Query Table +833331000000106,Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue,n,via Query Table +633321000000101,"Histiocytosis X, unspecified (disorder)",n,via Query Table +832601000000100,"Hodgkin's disease, nodular sclerosis",n,via Query Table +416901000000108,"[M]Malignant lymphoma, nodular NOS (morphologic abnormality)",n,via Query Table +190036003,[M]Aleukemic lymphoid leukemia (morphologic abnormality),n,via Query Table +572191000000103,Hodgkin's granuloma NOS (disorder),n,via Query Table +367051000000101,Mantle cell lymphoma (morphologic abnormality),n,via Query Table +833031000000109,Eosinophilic granuloma,n,via Query Table +188678009,Diffuse non-Hodgkin's lymphoblastic (diffuse) lymphoma (disorder),n,via Query Table +420631000000103,[M]Acute lymphoid leukaemia (morphologic abnormality),n,via Query Table +190011009,[M] Gamma heavy chain disease (morphologic abnormality),n,via Query Table +470351000000104,[M]Polycythemia vera (morphologic abnormality),n,via Query Table +445681000000106,[M]Lymphosarcoma cell leukaemia (morphologic abnormality),n,via Query Table +95256006,Sézary's disease of intra-abdominal lymph nodes (disorder),n,via Query Table +556061000000105,Burkitt's lymphoma NOS (disorder),n,via Query Table +190038002,[M]Plasma cell leukemias (morphologic abnormality),n,via Query Table +95257002,Sézary's disease of intrapelvic lymph nodes (disorder),n,via Query Table +6357002,AIDS with primary lymphoma of the brain (disorder),n,via Query Table +833061000000104,Anaplastic lymphoma kinase negative anaplastic large cell lymphoma,n,via Query Table +833691000000101,Hypereosinophilic syndrome,n,via Query Table +450611000000107,[X]Other monocytic leukaemia (morphologic abnormality),n,via Query Table +662441000000104,Subacute leukemia NOS (disorder),n,via Query Table +832631000000106,Lymphocyte-rich classical Hodgkin lymphoma,n,via Query Table +190039005,[M]Plasma cell leukemia NOS (morphologic abnormality),n,via Query Table +556151000000108,Malignant lymphoma NOS of unspecified site (disorder),n,via Query Table +832621000000109,"Hodgkin's disease, lymphocytic depletion",n,via Query Table +190001002,"[M]Malignant lymphoma, follicular center cell, non-cleaved, follicular (morphologic abnormality)",n,via Query Table +189981007,"[M]Lymphoma, diffuse or NOS (morphologic abnormality)",n,via Query Table +188756007,Acute panmyelosis (disorder),n,via Query Table +71390001,Plasma cell dyscrasia (disorder),n,via Query Table +409561000000107,[M]Microglioma (morphologic abnormality),n,via Query Table +832651000000104,B-cell acute lymphoblastic leukaemia,n,via Query Table +302852008,Plasmacytoma (disorder),n,via Query Table +408281000000107,[X]Other malignant immunoproliferative diseases (disorder),n,via Query Table +557671000000107,Unspecified malignant neoplasm of lymphoid and histiocytic tissue of intrathoracic lymph nodes (disorder),n,via Query Table +278190000,Erythremia (morphologic abnormality),n,via Query Table +430841000000108,[M]Angioendotheliomatosis,n,via Query Table +414451000000109,[X]Other and unspecified peripheral and cutaneous T-cell lymphomas,n,via Query Table +814851000000101,Diffuse follicle centre lymphoma (disorder),n,via Query Table +255100007,Mycosis fungoides of skin (disorder),n,via Query Table +814201000000103,Primary mediastinal (thymic) large B-cell lymphoma (disorder),n,via Query Table +190019006,[M]Plasma cell tumor NOS (morphologic abnormality),n,via Query Table +188561006,"Hodgkin's, lymphocytic-histiocytic predominance of spleen (disorder)",n,via Query Table +190043009,[M]Erythroleukemia NOS (morphologic abnormality),n,via Query Table +190053005,[M]Basophilic leukemia NOS (morphologic abnormality),n,via Query Table +396701000000100,[M]Hodgkin's paragranuloma (morphologic abnormality),n,via Query Table +269510001,"[M]Malignant lymphoma, nodular NOS (morphologic abnormality)",n,via Query Table +269508003,"[M]Malignant lymphoma, mixed lymphocytic-histiocytic NOS (morphologic abnormality)",n,via Query Table +461891000000102,[M]Plasma cell leukaemia NOS (morphologic abnormality),n,via Query Table +93149008,Leukemic reticuloendotheliosis of lymph nodes of inguinal region AND/OR lower limb (disorder),n,via Query Table +815031000000104,Hepatosplenic T-cell lymphoma (disorder),n,via Query Table +366059005,Letterer-Siwe disease (disorder),n,via Query Table +403451000000108,"[M]Hodgkin's disease, lymphocytic predominance (morphologic abnormality)",n,via Query Table +190229005,"[X]Myelodysplastic syndrome, unspecified (disorder)",n,via Query Table +190049008,[M]Aleukemic myeloid leukemia (morphologic abnormality),n,via Query Table +833371000000108,Follicular lymphoma grade 3a,n,via Query Table +425541000000104,[M] Large cell lymphoma (morphologic abnormality),n,via Query Table +425191000000102,[M]Other monocytic leukaemia NOS (morphologic abnormality),n,via Query Table +128087008,Monoclonal gammopathy of undetermined significance (MGUS) (disorder),n,via Query Table +466491000000105,[M] Monoclonal gammopathy (morphologic abnormality),n,via Query Table +398691000000101,"[M]Malignant lymphoma, lymphocytic, poorly differentiated NOS (morphologic abnormality)",n,via Query Table +189961006,"[M]Malignant lymphoma, undifferentiated cell type NOS (morphologic abnormality)",n,via Query Table +189963009,"[M]Malignant lymphoma, convoluted cell type NOS (morphologic abnormality)",n,via Query Table +556141000000105,Malignant lymphoma otherwise specified (disorder),n,via Query Table +450944007,Polymorphic post transplant lymphoproliferative disorder (morphologic abnormality),n,via Query Table +539741000000101,Mycosis fungoides NOS (disorder),n,via Query Table +389871000000106,[M]Burkitt's tumours (morphologic abnormality),n,via Query Table +134182002,[M]Polycythemia vera (morphologic abnormality),n,via Query Table +833351000000104,Follicular lymphoma grade 2,n,via Query Table +778041000000106,"[M]Malignant lymphoma, large cell, diffuse NOS",n,via Query Table +437761000000104,[X]Other lymphoid leukaemia (disorder),n,via Query Table +556071000000103,Other specified reticulosarcoma or lymphosarcoma (disorder),n,via Query Table +450051000000104,[X]Other types of follicular non-Hodgkin's lymphoma (disorder),n,via Query Table +425261000000101,[M]Plasma cell tumour NOS (morphologic abnormality),n,via Query Table +91859000,"Acute monocytic leukemia, FAB M5 (disorder)",n,via Query Table +572201000000101,Hodgkin's sarcoma of unspecified site (disorder),n,via Query Table +190031008,[M]Compound leukemia (morphologic abnormality),n,via Query Table +285766002,Acute myeloblastic leukemia without maturation (disorder),n,via Query Table +190023003,[M]Burkitt's tumor NOS (morphologic abnormality),n,via Query Table +401241000000107,"[M]Malignant lymphoma, small cleaved cell, diffuse (morphologic abnormality)",n,via Query Table +555761000000103,Letterer-Siwe disease of unspecified sites (disorder),n,via Query Table +867931000000106,[M]Juvenile myelomonocytic leukaemia (morphologic abnormality),n,via Query Table +466521000000108,"[M]Hodgkin's disease, lymphocytic depletion NOS (morphologic abnormality)",n,via Query Table +833571000000101,Angioimmunoblastic lymphadenopathy with dysproteinaemia,n,via Query Table +190008008,[M] Peripheral T-cell lymphoma NOS (morphologic abnormality),n,via Query Table +190040007,[M]Erythroleukemias (morphologic abnormality),n,via Query Table +189971008,"[M]Malignant lymphoma, follicular center cell, cleaved NOS (morphologic abnormality)",n,via Query Table +399211000000101,"[X]Non-Hodgkin's lymphoma, unspecified type (disorder)",n,via Query Table +863791000000103,Clinical stage C chronic lymphocytic leukaemia ,n,via Query Table +425951000000108,[X]Other and unspecified peripheral and cutaneous T-cell lymphomas (disorder),n,via Query Table +188658001,Letterer-Siwe disease of lymph nodes of inguinal region and lower limb (disorder),n,via Query Table +190034000,[M]Acute lymphoid leukemia (morphologic abnormality),n,via Query Table +833471000000102,Acute myeloid leukaemia with 11q23 abnormality,n,via Query Table +190057006,[M]Monocytic leukemias (morphologic abnormality),n,via Query Table +408331000000102,"[M]Malignant lymphoma, diffuse NOS (morphologic abnormality)",n,via Query Table +833121000000106,Hepatosplenic T-cell lymphoma,n,via Query Table +437801000000109,[M]Erythroleukemia NOS (morphologic abnormality),n,via Query Table +832911000000106,Acute myeloblastic leukaemia,n,via Query Table +189957000,"[M]Lymphomas, NOS or diffuse (morphologic abnormality)",n,via Query Table +425521000000106,"[M]Malignant lymphoma, follicular centre cell, non-cleaved NOS (morphologic abnormality)",n,via Query Table +687931000000101,Lymphoid and histiocytic malignancy NOS (disorder),n,via Query Table +134180005,[M] Monoclonal gammopathy (morphologic abnormality),n,via Query Table +833431000000104,[M]Erythroleukaemia,n,via Query Table +189996006,"[M]Malignant lymphoma, lymphocytic, well differentiated, nodular (morphologic abnormality)",n,via Query Table +833551000000105,Langerhans' cell histiocytosis,n,via Query Table +539711000000102,Nodular lymphoma NOS (disorder),n,via Query Table +399501000000100,[X]Other leukaemia of unspecified cell type (disorder),n,via Query Table +188523008,"Hodgkin's paragranuloma of lymph nodes of head, face, and neck (disorder)",n,via Query Table +464031000000108,"[M]Lymphoma, nodular or follicular NOS (morphologic abnormality)",n,via Query Table +472951000000104,[M]Subacute lymphoid leukaemia (morphologic abnormality),n,via Query Table +478021000000105,"[M]Malignant lymphoma, follicular centre cell, cleaved, follicular (morphologic abnormality)",n,via Query Table +42215000,Solitary osseous myeloma (disorder),n,via Query Table +189988001,"[M]Hodgkin's disease, lymphocytic predominance (morphologic abnormality)",n,via Query Table +408831000000107,[M]Monocytic leukaemias (morphologic abnormality),n,via Query Table +419427007,Primary cutaneous large B-cell lymphoma of the leg (morphologic abnormality),n,via Query Table +546351000000108,Chronic myeloid leukemia NOS (disorder),n,via Query Table diff --git a/codelists/opensafely-housebound.csv b/codelists/opensafely-housebound.csv new file mode 100644 index 0000000..aa7dae0 --- /dev/null +++ b/codelists/opensafely-housebound.csv @@ -0,0 +1,10 @@ +code,term +138079003,Housebound +160685001,Bed-ridden +160689007,Housebound +276041000000103,Temporarily housebound +276051000000100,Temporarily housebound +276061000000102,Temporarily housebound +428415003,Temporarily housebound +759311000000103,Housebound patient review +759321000000109,Housebound patient review diff --git a/codelists/opensafely-hypertension-snomed.csv b/codelists/opensafely-hypertension-snomed.csv new file mode 100644 index 0000000..bdd1d7c --- /dev/null +++ b/codelists/opensafely-hypertension-snomed.csv @@ -0,0 +1,381 @@ +id,name,active,notes +38481006,Hypertensive renal disease (disorder),y,direct mapping +83105008,Malignant hypertensive heart disease with congestive heart failure (disorder),y,direct mapping +48146000,Diastolic hypertension (disorder),y,direct mapping +199006004,"Pre-existing hypertensive heart disease complicating pregnancy, childbirth and the puerperium (disorder)",y,direct mapping +270440008,Hypertension monitoring check done (finding),y,direct mapping +697929007,Intermittent hypertension (disorder),y,direct mapping +185716009,Attends hypertension monitoring (finding),y,direct mapping +66610008,Malignant hypertensive heart AND renal disease (disorder),y,direct mapping +308502002,Hypertension monitoring status (finding),y,direct mapping +308427006,Hypertension screening recall (procedure),y,direct mapping +163028000,On examination - blood pressure reading very high (finding),y,direct mapping +713641000000103,Hypertension monitoring administration (record artifact),y,direct mapping +736286003,Hypertension clinical management plan (record artifact),y,direct mapping +268509003,Cardiac disease monitoring (regime/therapy),y,direct mapping +302192008,On treatment for hypertension (regime/therapy),y,direct mapping +220901000000101,High cost hypertension drug therapy - OPCS Classification of Interventions and Procedures (procedure),y,direct mapping +194767001,Benign hypertensive heart disease with congestive cardiac failure (disorder),y,direct mapping +1201005,Benign essential hypertension (disorder),y,direct mapping +38341003,"Hypertensive disorder, systemic arterial (disorder)",y,direct mapping +1066941000000104,Hypertension monitoring invitation short message service text message (procedure),y,direct mapping +401118009,Hypertension annual review (procedure),y,direct mapping +198997005,Pre-eclampsia or eclampsia with pre-existing hypertension (disorder),y,direct mapping +73410007,Benign secondary renovascular hypertension (disorder),y,direct mapping +66052004,Benign hypertensive heart AND renal disease (disorder),y,direct mapping +199005000,"Pre-existing hypertension complicating pregnancy, childbirth and puerperium (disorder)",y,direct mapping +1066961000000103,Hypertension monitoring short message service text message second invitation (procedure),y,direct mapping +185723005,Hypertension monitoring telephone invite (procedure),y,direct mapping +161501007,History of hypertension (situation),y,direct mapping +845891000000103,Hypertension resistant to drug therapy (disorder),y,direct mapping +194780003,Hypertensive heart and renal disease with renal failure (disorder),y,direct mapping +163027005,On examination - blood pressure reading raised (finding),y,direct mapping +194783001,Secondary malignant renovascular hypertension (disorder),y,direct mapping +86234004,Hypertensive heart AND renal disease (disorder),y,direct mapping +275516004,Cardiomegaly - hypertensive (disorder),y,direct mapping +401117004,Moderate hypertension control (finding),y,direct mapping +193003,Benign hypertensive renal disease (disorder),y,direct mapping +199007008,"Pre-existing hypertensive heart and renal disease complicating pregnancy, childbirth and the puerperium (disorder)",y,direct mapping +162659009,Hypertension resolved (finding),y,direct mapping +308503007,Hypertension monitoring call (procedure),y,direct mapping +1083101000000106,Hypertension monitoring invitation email (procedure),y,direct mapping +65443008,Malignant hypertensive renal disease (disorder),y,direct mapping +863191000000102,Nocturnal hypertension (disorder),y,direct mapping +275944005,Hypertension monitoring (regime/therapy),y,direct mapping +185264001,Seen in hypertension clinic (finding),y,direct mapping +183856001,Referral to hypertension clinic (procedure),y,direct mapping +48194001,Pregnancy-induced hypertension (disorder),y,direct mapping +908651000000101,Stage 1 hypertension (National Institute for Health and Clinical Excellence 2011) with evidence of end organ damage (disorder),y,direct mapping +31992008,Secondary hypertension (disorder),y,direct mapping +64715009,Hypertensive heart disease (disorder),y,direct mapping +59621000,Essential hypertension (disorder),y,direct mapping +185718005,Hypertension monitoring offer default (finding),y,direct mapping +1066971000000105,Hypertension monitoring short message service text message third invitation (procedure),y,direct mapping +36221001,Benign hypertensive heart disease (disorder),y,direct mapping +194788005,Hypertension secondary to endocrine disorder (disorder),y,direct mapping +846371000000103,Stage 2 hypertension (National Institute for Health and Clinical Excellence 2011) (disorder),y,direct mapping +401048005,Hypertension six month review (procedure),y,direct mapping +170579000,Hypertension:follow-up default (finding),y,direct mapping +36315003,Malignant hypertensive heart disease without congestive heart failure (disorder),y,direct mapping +185721007,Hypertension monitoring third letter (procedure),y,direct mapping +810981000000107,Hypertension self-management plan review (procedure),y,direct mapping +6962006,Hypertensive retinopathy (disorder),y,direct mapping +50490005,Hypertensive encephalopathy (disorder),y,direct mapping +908631000000108,Stage 1 hypertension (National Institute for Health and Clinical Excellence 2011) without evidence of end organ damage (disorder),y,direct mapping +199008003,"Pre-existing secondary hypertension complicating pregnancy, childbirth and puerperium (disorder)",y,direct mapping +713661000000102,Hypertension clinic administration (record artifact),y,direct mapping +78975002,Malignant essential hypertension (disorder),y,direct mapping +89242004,Malignant secondary hypertension (disorder),y,direct mapping +170578008,Poor hypertension control (finding),y,direct mapping +194779001,Hypertensive heart and renal disease with (congestive) heart failure (disorder),y,direct mapping +170577003,Good hypertension control (finding),y,direct mapping +123799005,Renovascular hypertension (disorder),y,direct mapping +194781004,Hypertensive heart and renal disease with both (congestive) heart failure and renal failure (disorder),y,direct mapping +843821000000102,Stage 1 hypertension (National Institute for Health and Clinical Excellence 2011) (disorder),y,direct mapping +185722000,Hypertension monitoring verbal invite (procedure),y,direct mapping +54225002,Malignant hypertensive heart disease (disorder),y,direct mapping +407567007,Patient on maximal tolerated antihypertensive therapy (finding),y,direct mapping +170587004,Hypertensive treatment changed (situation),y,direct mapping +86041002,Pre-existing hypertension in obstetric context (disorder),y,direct mapping +185719002,Hypertension monitoring first letter (procedure),y,direct mapping +170586008,Treatment for hypertension started (situation),y,direct mapping +95691008,Arteriosclerotic retinopathy (disorder),y,direct mapping +194785008,Secondary benign hypertension (disorder),y,direct mapping +70272006,Malignant hypertension (disorder),y,direct mapping +170588009,Treatment for hypertension stopped (situation),y,direct mapping +56218007,Systolic hypertension (disorder),y,direct mapping +766211000000109,Hypertension 9 month review (regime/therapy),y,direct mapping +185720008,Hypertension monitoring second letter (procedure),y,direct mapping +308116003,Antihypertensive therapy (procedure),y,direct mapping +843841000000109,Severe hypertension (National Institute for Health and Clinical Excellence 2011) (disorder),y,direct mapping +1066951000000101,Hypertension monitoring short message service text message first invitation (procedure),y,direct mapping +698640000,Hypertension in the puerperium with pulmonary edema (disorder),y,descendant of concept mapped from leaf +96731000119100,Hypertensive heart AND chronic kidney disease stage 3 (disorder),y,descendant of concept mapped from leaf +285831000119108,Malignant hypertensive chronic kidney disease (disorder),y,descendant of concept mapped from leaf +371125006,Labile essential hypertension (disorder),y,descendant of concept mapped from leaf +23717007,Benign essential hypertension complicating AND/OR reason for care during pregnancy (disorder),y,descendant of concept mapped from leaf +39018007,Renal arterial hypertension (disorder),y,descendant of concept mapped from leaf +62240004,Benign arteriolar nephrosclerosis (disorder),y,descendant of concept mapped from leaf +198954000,"Renal hypertension complicating pregnancy, childbirth and the puerperium with postnatal complication (disorder)",y,descendant of concept mapped from leaf +37618003,Chronic hypertension complicating AND/OR reason for care during pregnancy (disorder),y,descendant of concept mapped from leaf +198951008,"Renal hypertension complicating pregnancy, childbirth and the puerperium - delivered (disorder)",y,descendant of concept mapped from leaf +1474004,Hypertensive heart AND renal disease complicating AND/OR reason for care during childbirth (disorder),y,descendant of concept mapped from leaf +726513006,History of hemolysis-elevated liver enzymes-low platelet count syndrome (situation),y,descendant of concept mapped from leaf +129151000119102,Chronic kidney disease stage 4 due to hypertension (disorder),y,descendant of concept mapped from leaf +198966006,Transient hypertension of pregnancy - delivered with postnatal complication (disorder),y,descendant of concept mapped from leaf +851071000000108,Heart failure initial assessment (regime/therapy),y,descendant of concept mapped from leaf +248411000000105,Atrial fibrillation annual review (regime/therapy),y,descendant of concept mapped from leaf +153891000119101,End stage renal disease on dialysis due to hypertension on (disorder),y,descendant of concept mapped from leaf +31407004,Pre-existing hypertension complicating AND/OR reason for care during puerperium (disorder),y,descendant of concept mapped from leaf +198949009,"Renal hypertension complicating pregnancy, childbirth and the puerperium (disorder)",y,descendant of concept mapped from leaf +29259002,Malignant hypertension complicating AND/OR reason for care during pregnancy (disorder),y,descendant of concept mapped from leaf +390885007,Heart failure annual review (regime/therapy),y,descendant of concept mapped from leaf +71874008,Benign essential hypertension complicating AND/OR reason for care during childbirth (disorder),y,descendant of concept mapped from leaf +105651000119100,History of pre-eclampsia (situation),y,descendant of concept mapped from leaf +140111000119107,Hypertension in chronic kidney disease stage 4 due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +428575007,Hypertension secondary to kidney transplant (disorder),y,descendant of concept mapped from leaf +40521000119100,Postpartum pregnancy-induced hypertension (disorder),y,descendant of concept mapped from leaf +23786008,Malignant hypertension complicating AND/OR reason for care during puerperium (disorder),y,descendant of concept mapped from leaf +96741000119109,Hypertensive heart AND chronic kidney disease stage 2 (disorder),y,descendant of concept mapped from leaf +34694006,Pre-existing hypertension complicating AND/OR reason for care during childbirth (disorder),y,descendant of concept mapped from leaf +10757441000119102,Pre-existing hypertensive heart disease in mother complicating childbirth (disorder),y,descendant of concept mapped from leaf +123800009,Goldblatt hypertension (disorder),y,descendant of concept mapped from leaf +49220004,Hypertensive renal failure (disorder),y,descendant of concept mapped from leaf +81626002,Malignant hypertension in obstetric context (disorder),y,descendant of concept mapped from leaf +199003007,Pre-eclampsia or eclampsia with pre-existing hypertension with postnatal complication (disorder),y,descendant of concept mapped from leaf +712832005,Supine hypertension (disorder),y,descendant of concept mapped from leaf +284961000119106,Chronic kidney disease due to benign hypertension (disorder),y,descendant of concept mapped from leaf +698638005,Pregnancy induced hypertension with pulmonary edema (disorder),y,descendant of concept mapped from leaf +762463000,Diastolic hypertension co-occurrent with systolic hypertension (disorder),y,descendant of concept mapped from leaf +198953006,"Renal hypertension complicating pregnancy, childbirth and the puerperium - not delivered (disorder)",y,descendant of concept mapped from leaf +709881001,History of gestational hypertension (situation),y,descendant of concept mapped from leaf +5501000119106,Postoperative hypertension (disorder),y,descendant of concept mapped from leaf +712487000,End stage renal disease due to benign hypertension (disorder),y,descendant of concept mapped from leaf +96751000119106,Hypertensive heart AND chronic kidney disease stage 1 (disorder),y,descendant of concept mapped from leaf +134377004,Atrial fibrillation monitoring (regime/therapy),y,descendant of concept mapped from leaf +74451002,Secondary diastolic hypertension (disorder),y,descendant of concept mapped from leaf +697930002,Labile hypertension due to being in a clinical environment (disorder),y,descendant of concept mapped from leaf +237279007,Transient hypertension of pregnancy (disorder),y,descendant of concept mapped from leaf +77970009,Benign hypertensive heart disease without congestive heart failure (disorder),y,descendant of concept mapped from leaf +286371000119107,Malignant hypertensive end stage renal disease on dialysis (disorder),y,descendant of concept mapped from leaf +170571002,Initial cardiac assessment (regime/therapy),y,descendant of concept mapped from leaf +703310005,Autosomal dominant progressive nephropathy with hypertension (disorder),y,descendant of concept mapped from leaf +134378009,Congestive heart failure monitoring (regime/therapy),y,descendant of concept mapped from leaf +198967002,Transient hypertension of pregnancy - not delivered (disorder),y,descendant of concept mapped from leaf +26078007,Hypertension secondary to renal disease complicating AND/OR reason for care during childbirth (disorder),y,descendant of concept mapped from leaf +417206009,Cardiovascular disease monitoring (regime/therapy),y,descendant of concept mapped from leaf +104931000119100,Chronic kidney disease due to hypertension (disorder),y,descendant of concept mapped from leaf +59720008,Sustained diastolic hypertension (disorder),y,descendant of concept mapped from leaf +199000005,Pre-eclampsia or eclampsia with pre-existing hypertension - delivered with postnatal complication (disorder),y,descendant of concept mapped from leaf +765182005,Pre-eclampsia in puerperium (disorder),y,descendant of concept mapped from leaf +10562009,Malignant hypertension complicating AND/OR reason for care during childbirth (disorder),y,descendant of concept mapped from leaf +39727004,Hypertension secondary to renal disease complicating AND/OR reason for care during puerperium (disorder),y,descendant of concept mapped from leaf +140121000119100,Hypertension in chronic kidney disease stage 3 due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +198965005,Transient hypertension of pregnancy - delivered (disorder),y,descendant of concept mapped from leaf +15781000119107,Hypertensive heart AND chronic kidney disease with congestive heart failure (disorder),y,descendant of concept mapped from leaf +67359005,Pre-eclampsia added to pre-existing hypertension (disorder),y,descendant of concept mapped from leaf +715280009,Telehealth hypertension monitoring (regime/therapy),y,descendant of concept mapped from leaf +59997006,Endocrine hypertension (disorder),y,descendant of concept mapped from leaf +473392002,Hypertensive nephrosclerosis (disorder),y,descendant of concept mapped from leaf +31881008,Cardiovascular renal disease (disorder),y,descendant of concept mapped from leaf +284991000119104,Chronic kidney disease stage 3 due to benign hypertension (disorder),y,descendant of concept mapped from leaf +198986005,Severe pre-eclampsia with postnatal complication (disorder),y,descendant of concept mapped from leaf +199002002,Pre-eclampsia or eclampsia with pre-existing hypertension - not delivered (disorder),y,descendant of concept mapped from leaf +307632004,Non-proteinuric hypertension of pregnancy (disorder),y,descendant of concept mapped from leaf +18416000,Essential hypertension complicating AND/OR reason for care during childbirth (disorder),y,descendant of concept mapped from leaf +16229371000119106,Labile systemic arterial hypertension (disorder),y,descendant of concept mapped from leaf +198942000,"Benign essential hypertension complicating pregnancy, childbirth and the puerperium (disorder)",y,descendant of concept mapped from leaf +10752641000119102,Eclampsia with pre-existing hypertension in childbirth (disorder),y,descendant of concept mapped from leaf +140101000119109,Hypertension in chronic kidney disease stage 5 due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +161807003,History of severe pre-eclampsia (situation),y,descendant of concept mapped from leaf +52698002,Transient hypertension (disorder),y,descendant of concept mapped from leaf +82771000119102,Hypertension complicating pregnancy (disorder),y,descendant of concept mapped from leaf +288250001,Maternal hypertension (disorder),y,descendant of concept mapped from leaf +8762007,Chronic hypertension in obstetric context (disorder),y,descendant of concept mapped from leaf +19769006,High-renin essential hypertension (disorder),y,descendant of concept mapped from leaf +118781000119108,Pre-existing hypertensive chronic kidney disease in mother complicating pregnancy (disorder),y,descendant of concept mapped from leaf +24042004,Chronic hypertension complicating AND/OR reason for care during puerperium (disorder),y,descendant of concept mapped from leaf +429198000,Exertional hypertension (disorder),y,descendant of concept mapped from leaf +284981000119102,Chronic kidney disease stage 2 due to benign hypertension (disorder),y,descendant of concept mapped from leaf +398254007,Pre-eclampsia (disorder),y,descendant of concept mapped from leaf +40511000119107,Postpartum pre-existing essential hypertension (disorder),y,descendant of concept mapped from leaf +48552006,Hypertension secondary to renal disease complicating AND/OR reason for care during pregnancy (disorder),y,descendant of concept mapped from leaf +198984008,Severe pre-eclampsia - delivered with postnatal complication (disorder),y,descendant of concept mapped from leaf +10725009,Benign hypertension (disorder),y,descendant of concept mapped from leaf +111438007,Hypertension secondary to renal disease in obstetric context (disorder),y,descendant of concept mapped from leaf +285011000119108,Chronic kidney disease stage 5 due to benign hypertension (disorder),y,descendant of concept mapped from leaf +198944004,"Benign essential hypertension complicating pregnancy, childbirth and the puerperium - delivered (disorder)",y,descendant of concept mapped from leaf +132721000119104,Hypertensive emergency (disorder),y,descendant of concept mapped from leaf +720568003,Brachydactyly and arterial hypertension syndrome (disorder),y,descendant of concept mapped from leaf +117681000119102,Chronic kidney disease stage 1 due to hypertension (disorder),y,descendant of concept mapped from leaf +65402008,Pre-existing hypertension complicating AND/OR reason for care during pregnancy (disorder),y,descendant of concept mapped from leaf +96711000119105,Hypertensive heart AND chronic kidney disease stage 5 (disorder),y,descendant of concept mapped from leaf +57684003,Parenchymal renal hypertension (disorder),y,descendant of concept mapped from leaf +23130000,Paroxysmal hypertension (disorder),y,descendant of concept mapped from leaf +28119000,Renal hypertension (disorder),y,descendant of concept mapped from leaf +541000119105,"Hypertension complicating pregnancy, childbirth and the puerperium, antepartum (disorder)",y,descendant of concept mapped from leaf +285001000119105,Chronic kidney disease stage 4 due to benign hypertension (disorder),y,descendant of concept mapped from leaf +46764007,Severe pre-eclampsia (disorder),y,descendant of concept mapped from leaf +16147005,Arteriolar nephritis (disorder),y,descendant of concept mapped from leaf +367390009,Hypertension in the obstetric context (disorder),y,descendant of concept mapped from leaf +698591006,Benign hypertensive renal disease with renal failure (disorder),y,descendant of concept mapped from leaf +170601008,Coronary heart disease monitoring (regime/therapy),y,descendant of concept mapped from leaf +198985009,Severe pre-eclampsia - not delivered (disorder),y,descendant of concept mapped from leaf +9901000,Essential hypertension complicating AND/OR reason for care during puerperium (disorder),y,descendant of concept mapped from leaf +8218002,Chronic hypertension complicating AND/OR reason for care during childbirth (disorder),y,descendant of concept mapped from leaf +417322008,Cardiovascular disease annual review (regime/therapy),y,descendant of concept mapped from leaf +492611000000102,Cardiovascular disease high risk review (regime/therapy),y,descendant of concept mapped from leaf +49102001,Hypertensive heart AND renal disease in obstetric context (disorder),y,descendant of concept mapped from leaf +78808002,Essential hypertension complicating AND/OR reason for care during pregnancy (disorder),y,descendant of concept mapped from leaf +706882009,Hypertensive crisis (disorder),y,descendant of concept mapped from leaf +140131000119102,Hypertension in chronic kidney disease stage 2 due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +96701000119107,Hypertensive heart AND chronic kidney disease on dialysis (disorder),y,descendant of concept mapped from leaf +153851000119106,Malignant hypertensive chronic kidney disease stage 5 (disorder),y,descendant of concept mapped from leaf +284971000119100,Chronic kidney disease stage 1 due to benign hypertension (disorder),y,descendant of concept mapped from leaf +41114007,Mild pre-eclampsia (disorder),y,descendant of concept mapped from leaf +8501000119104,Hypertensive heart and chronic kidney disease (disorder),y,descendant of concept mapped from leaf +14973001,Renal sclerosis with hypertension (disorder),y,descendant of concept mapped from leaf +170572009,Follow-up cardiac assessment (regime/therapy),y,descendant of concept mapped from leaf +198945003,"Benign essential hypertension complicating pregnancy, childbirth and the puerperium - delivered with postnatal complication (disorder)",y,descendant of concept mapped from leaf +845331000000109,Amiodarone monitoring (regime/therapy),y,descendant of concept mapped from leaf +285881000119109,Malignant hypertensive chronic kidney disease stage 4 (disorder),y,descendant of concept mapped from leaf +129181000119109,Chronic kidney disease stage 2 due to hypertension (disorder),y,descendant of concept mapped from leaf +198983002,Severe pre-eclampsia - delivered (disorder),y,descendant of concept mapped from leaf +129161000119100,Chronic kidney disease stage 5 due to hypertension (disorder),y,descendant of concept mapped from leaf +247361000000100,Heart failure 6 month review (regime/therapy),y,descendant of concept mapped from leaf +206596003,Neonatal hypertension (disorder),y,descendant of concept mapped from leaf +198999008,Pre-eclampsia or eclampsia with pre-existing hypertension - delivered (disorder),y,descendant of concept mapped from leaf +169465000,Hypertension caused by oral contraceptive pill (disorder),y,descendant of concept mapped from leaf +128001000119105,Hypertension concurrent and due to end stage renal disease on dialysis due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +63287004,Benign essential hypertension in obstetric context (disorder),y,descendant of concept mapped from leaf +10757481000119107,Pre-existing hypertensive heart and chronic kidney disease in mother complicating pregnancy (disorder),y,descendant of concept mapped from leaf +198947006,"Benign essential hypertension complicating pregnancy, childbirth and the puerperium with postnatal complication (disorder)",y,descendant of concept mapped from leaf +367821000119106,Hypertension due to compression of renal parenchyma (disorder),y,descendant of concept mapped from leaf +237282002,Impending eclampsia (disorder),y,descendant of concept mapped from leaf +198968007,Transient hypertension of pregnancy with postnatal complication (disorder),y,descendant of concept mapped from leaf +95605009,Hemolysis-elevated liver enzymes-low platelet count syndrome (disorder),y,descendant of concept mapped from leaf +170574005,Yearly observation of borderline hypertension (regime/therapy),y,descendant of concept mapped from leaf +49171007,Hypertensive renal disease complicating AND/OR reason for care during childbirth (disorder),y,descendant of concept mapped from leaf +46481004,Low-renin essential hypertension (disorder),y,descendant of concept mapped from leaf +170573004,Pre-treatment blood pressure reading (regime/therapy),y,descendant of concept mapped from leaf +57873008,Hypertensive renal disease complicating AND/OR reason for care during puerperium (disorder),y,descendant of concept mapped from leaf +707265005,Aortic aneurysm monitoring (regime/therapy),y,descendant of concept mapped from leaf +198952001,"Renal hypertension complicating pregnancy, childbirth and the puerperium - delivered with postnatal complication (disorder)",y,descendant of concept mapped from leaf +72022006,Essential hypertension in obstetric context (disorder),y,descendant of concept mapped from leaf +429457004,Systolic essential hypertension (disorder),y,descendant of concept mapped from leaf +84094009,Rebound hypertension (disorder),y,descendant of concept mapped from leaf +65518004,Labile diastolic hypertension (disorder),y,descendant of concept mapped from leaf +198941007,"Hypertension complicating pregnancy, childbirth and the puerperium (disorder)",y,descendant of concept mapped from leaf +10757401000119104,Pre-existing hypertensive heart and chronic kidney disease in mother complicating childbirth (disorder),y,descendant of concept mapped from leaf +194791005,Hypertension caused by drug (disorder),y,descendant of concept mapped from leaf +443482000,Hypertensive urgency (disorder),y,descendant of concept mapped from leaf +96721000119103,Hypertensive heart AND chronic kidney disease stage 4 (disorder),y,descendant of concept mapped from leaf +427889009,Hypertension associated with transplantation (disorder),y,descendant of concept mapped from leaf +78544004,Chronic hypertensive uremia (disorder),y,descendant of concept mapped from leaf +73030000,Hypertensive renal disease in obstetric context (disorder),y,descendant of concept mapped from leaf +81363003,Malignant arteriolar nephrosclerosis (disorder),y,descendant of concept mapped from leaf +66709007,Hypertensive renal disease complicating AND/OR reason for care during pregnancy (disorder),y,descendant of concept mapped from leaf +417287002,Cardiovascular disease interim monitoring (regime/therapy),y,descendant of concept mapped from leaf +69909000,Eclampsia added to pre-existing hypertension (disorder),y,descendant of concept mapped from leaf +285841000119104,Malignant hypertensive end stage renal disease (disorder),y,descendant of concept mapped from leaf +395148004,Cardiac event recording (regime/therapy),y,descendant of concept mapped from leaf +285871000119106,Malignant hypertensive chronic kidney disease stage 3 (disorder),y,descendant of concept mapped from leaf +871681000000102,Heart failure monitoring (regime/therapy),y,descendant of concept mapped from leaf +111411000119103,End stage renal disease due to hypertension (disorder),y,descendant of concept mapped from leaf +35303009,Benign essential hypertension complicating AND/OR reason for care during puerperium (disorder),y,descendant of concept mapped from leaf +127991000119101,Hypertension concurrent and due to end stage renal disease on dialysis due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +285861000119100,Malignant hypertensive chronic kidney disease stage 2 (disorder),y,descendant of concept mapped from leaf +71421000119105,Hypertension in chronic kidney disease due to type 2 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +704667004,Hypertension concurrent and due to end stage renal disease on dialysis (disorder),y,descendant of concept mapped from leaf +71701000119105,Hypertension in chronic kidney disease due to type 1 diabetes mellitus (disorder),y,descendant of concept mapped from leaf +285851000119102,Malignant hypertensive chronic kidney disease stage 1 (disorder),y,descendant of concept mapped from leaf +170591009,Digoxin monitoring (regime/therapy),y,descendant of concept mapped from leaf +397748008,Hypertension with albuminuria (disorder),y,descendant of concept mapped from leaf +22966008,Hypertensive heart AND renal disease complicating AND/OR reason for care during pregnancy (disorder),y,descendant of concept mapped from leaf +15394000,Toxemia of pregnancy (disorder),y,descendant of concept mapped from leaf +237281009,Moderate proteinuric hypertension of pregnancy (disorder),y,descendant of concept mapped from leaf +198946002,"Benign essential hypertension complicating pregnancy, childbirth and the puerperium - not delivered (disorder)",y,descendant of concept mapped from leaf +170590005,Cardiac drug monitoring (regime/therapy),y,descendant of concept mapped from leaf +766937004,Hypertension due to gain-of-function mutation in mineralocorticoid receptor (disorder),y,descendant of concept mapped from leaf +129171000119106,Chronic kidney disease stage 3 due to hypertension (disorder),y,descendant of concept mapped from leaf +221281000000109,High cost hypertension drug therapy NOS - OPCS Classification of Interventions and Procedures (procedure),n,via Query Table +843851000000107,Severe hypertension ,n,via Query Table +692801000000103,"Benign essential hypertension complicating pregnancy, childbirth and the puerperium NOS (disorder)",n,via Query Table +272821000000100,Primary pulmonary hypertension drugs band 4 ,n,via Query Table +221291000000106,Other specified high cost hypertension drug therapy - OPCS Classification of Interventions and Procedures (procedure),n,via Query Table +492621000000108,At risk of cardiovascular disease review ,n,via Query Table +253041000000107,Heart failure 6 month review ,n,via Query Table +1051531000000104,"History of haemolysis, elevated liver enzymes, low platelet count syndrome (situation)",n,via Query Table +635071000000100,Mild or unspecified pre-eclampsia - delivered (disorder),n,via Query Table +478861000000109,"[X]Edema, proteinuria and hypertensive disorders in pregnancy, childbirth and the puerperium (disorder)",n,via Query Table +587111000000100,Pre-eclampsia or eclampsia with pre-existing hypertension unspecified (disorder),n,via Query Table +247111000000104,Diastolic hypertension (disorder),n,via Query Table +648001000000103,Mild or unspecified pre-eclampsia NOS (disorder),n,via Query Table +599281000000106,Hypertensive heart and renal disease NOS (disorder),n,via Query Table +684221000000101,Hypertensive heart disease NOS without congestive cardiac failure (disorder),n,via Query Table +892411000000107,Pulmonary arterial hypertension drugs Band 1 ,n,via Query Table +802941000000103,Aortic aneurysm monitoring (regime/therapy),n,via Query Table +1076211000000101,Arteriosclerotic retinopathy (disorder),n,via Query Table +845341000000100,Amiodarone monitoring ,n,via Query Table +695711000000100,Transient hypertension of pregnancy NOS (disorder),n,via Query Table +672551000000109,Mild or unspecified pre-eclampsia (disorder),n,via Query Table +419571000000103,[X]Hypertension secondary to other renal disorders (disorder),n,via Query Table +471521000000108,[X]Hypertensive diseases (disorder),n,via Query Table +606221000000105,"Other pre-existing hypertension complicating pregnancy, childbirth and the puerperium unspecified (disorder)",n,via Query Table +272841000000107,High cost hypertension drugs NOS ,n,via Query Table +586581000000102,Secondary benign hypertension NOS (disorder),n,via Query Table +599321000000103,Other specified hypertensive disease (disorder),n,via Query Table +272801000000109,Primary pulmonary hypertension drugs band 2 ,n,via Query Table +703671000000107,Pre-eclampsia NOS (disorder),n,via Query Table +492631000000105,At risk of cardiovascular disease review ,n,via Query Table +414391000000105,[X]Other secondary hypertension (disorder),n,via Query Table +276789009,Labile hypertension (disorder),n,via Query Table +695701000000102,Transient hypertension of pregnancy unspecified (disorder),n,via Query Table +191241000000108,Cardiovascular disease annual review,n,via Query Table +565761000000106,Cardiac disease monitoring NOS (regime/therapy),n,via Query Table +599261000000102,Hypertensive heart disease NOS (disorder),n,via Query Table +846381000000101,Stage 2 hypertension (NICE - National Institute for Health and Clinical Excellence 2011) ,n,via Query Table +892431000000104,Pulmonary arterial hypertension drugs Band 2 ,n,via Query Table +587121000000106,Pre-eclampsia or eclampsia with pre-existing hypertension NOS (disorder),n,via Query Table +599341000000105,Hypertensive disease NOS (disorder),n,via Query Table +11721000000102,Hypertension clinic admin. (administrative concept),n,via Query Table +684211000000107,Essential hypertension NOS (disorder),n,via Query Table +713651000000100,Hypertension monitoring administration NOS (record artifact),n,via Query Table +187811000000103,Cardiovascular disease interim monitoring,n,via Query Table +194766005,Benign hypertensive heart disease without congestive cardiac failure (disorder),n,via Query Table +187801000000100,Cardiovascular disease annual review,n,via Query Table +77737007,Benign hypertensive heart disease with congestive heart failure (disorder),n,via Query Table +645721000000102,Benign hypertensive heart disease NOS (disorder),n,via Query Table +948151000000100,Telehealth hypertension monitoring (regime/therapy),n,via Query Table +272781000000108,High cost hypertension drugs ,n,via Query Table +766221000000103,Hypertension 9 month review ,n,via Query Table +599291000000108,Secondary malignant hypertension NOS (disorder),n,via Query Table +674201000000103,Hypertension of pregnancy NOS (disorder),n,via Query Table +832151000000107,Hypertension self-management plan review,n,via Query Table +292601000000100,Diastolic hypertension,n,via Query Table +609021000000109,"Other pre-existing hypertension complicating pregnancy, childbirth and the puerperium - delivered with postnatal complication (disorder)",n,via Query Table +635061000000107,Mild or unspecified pre-eclampsia unspecified (disorder),n,via Query Table +635101000000109,Severe pre-eclampsia unspecified (disorder),n,via Query Table +250411000000105,Heart failure 6 month review ,n,via Query Table +191231000000104,Cardiovascular disease monitoring,n,via Query Table +412779008,Hypertension clinical management plan (qualifier value),n,via Query Table +167031000000101,Hypertension resolved,n,via Query Table +883971000000102,History of pre-eclampsia (situation),n,via Query Table +609011000000103,"Other pre-existing hypertension complicating pregnancy, childbirth and the puerperium - delivered (disorder)",n,via Query Table +250591000000100,Atrial fibrillation annual review ,n,via Query Table +845901000000102,Hypertension resistant to drug therapy ,n,via Query Table +802951000000100,Aortic aneurysm monitoring ,n,via Query Table +908661000000103,Stage 1 hypertension (NICE - National Institute for Health and Clinical Excellence 2011) with evidence of end organ damage ,n,via Query Table +892451000000106,Pulmonary arterial hypertension drugs Band 3 ,n,via Query Table +948161000000102,Telehealth hypertension monitoring ,n,via Query Table +843831000000100,Stage 1 hypertension ,n,via Query Table +599311000000109,Secondary renovascular hypertension NOS (disorder),n,via Query Table +272811000000106,Primary pulmonary hypertension drugs band 3 ,n,via Query Table +892471000000102,Pulmonary arterial hypertension drugs Band 4 ,n,via Query Table +40555009,Toxemia (disorder),n,via Query Table +187791000000104,Cardiovascular disease monitoring,n,via Query Table +308551004,Gestational hypertension (disorder),n,via Query Table +647991000000107,Mild or unspecified pre-eclampsia with postnatal complication (disorder),n,via Query Table +698810000,Hypertensive renal disease with end stage renal failure (disorder),n,via Query Table +883981000000100,H/O: pre-eclampsia ,n,via Query Table +606231000000107,"Other pre-existing hypertension complicating pregnancy, childbirth and the puerperium - not delivered (disorder)",n,via Query Table +627791000000106,"Other pre-existing hypertension complicating pregnancy, childbirth and the puerperium with postnatal complication (disorder)",n,via Query Table +3331000000104,Hypertension monitoring admin. (administrative concept),n,via Query Table +171791000000104,Hypertension resolved,n,via Query Table +608991000000100,"Renal hypertension complicating pregnancy, childbirth and the puerperium unspecified (disorder)",n,via Query Table +627801000000105,"Other pre-existing hypertension complicating pregnancy, childbirth and the puerperium NOS (disorder)",n,via Query Table +662181000000100,Hypertensive renal disease NOS (disorder),n,via Query Table +635081000000103,Mild or unspecified pre-eclampsia - delivered with postnatal complication (disorder),n,via Query Table +908641000000104,Stage 1 hypertension (NICE - National Institute for Health and Clinical Excellence 2011) without evidence of end organ damage ,n,via Query Table +272791000000105,Primary pulmonary hypertension drugs band 1 ,n,via Query Table +599271000000109,Hypertensive heart disease NOS with congestive cardiac failure (disorder),n,via Query Table +606201000000101,"Renal hypertension complicating pregnancy, childbirth and the puerperium NOS (disorder)",n,via Query Table +565741000000105,Cardiac drug monitoring NOS (regime/therapy),n,via Query Table +253221000000105,Atrial fibrillation annual review ,n,via Query Table +11511004,Hypertensive heart AND renal disease complicating AND/OR reason for care during puerperium (disorder),n,via Query Table +635091000000101,Mild or unspecified pre-eclampsia - not delivered (disorder),n,via Query Table +544581000000102,Toxemia NOS (disorder),n,via Query Table +606211000000104,"Other pre-existing hypertension complicating pregnancy, childbirth and the puerperium (disorder)",n,via Query Table +194774006,Hypertensive renal disease with renal failure (disorder),n,via Query Table +191251000000106,Cardiovascular disease interim monitoring,n,via Query Table +692791000000102,"Benign essential hypertension complicating pregnancy, childbirth and the puerperium unspecified (disorder)",n,via Query Table diff --git a/codelists/opensafely-learning-disabilities.csv b/codelists/opensafely-learning-disabilities.csv new file mode 100644 index 0000000..402c12a --- /dev/null +++ b/codelists/opensafely-learning-disabilities.csv @@ -0,0 +1,51 @@ +CTV3Code,Description +E3...,Mental retardation +E30..,(Mild mental retard (& [feeble-mind][moron])) or (educ subn) +E31..,Other specified mental retardation +E310.,"Moderate mental retardation, IQ in range 35-49" +E311.,"Severe mental retardation, IQ in range 20-34" +E312.,Profound mental retardation with IQ less than 20 +E31z.,Other specified mental retardation NOS +E3z..,Mental retardation NOS +Eu700,[X]Mld mental retard with statement no or min impairm behav +Eu701,[X]Mld mental retard sig impairment behav req attent/treatmt +Eu70y,"[X]Mild mental retardation, other impairments of behaviour" +Eu70z,[X]Mild mental retardation without mention impairment behav +Eu710,[X]Mod mental retard with statement no or min impairm behav +Eu711,[X]Mod mental retard sig impairment behav req attent/treatmt +Eu71y,[X]Mod retard oth behav impair +Eu71z,[X]Mod mental retardation without mention impairment behav +Eu720,[X]Sev mental retard with statement no or min impairm behav +Eu721,[X]Sev mental retard sig impairment behav req attent/treatmt +Eu72y,"[X]Severe mental retardation, other impairments of behaviour" +Eu72z,[X]Sev mental retardation without mention impairment behav +Eu730,[X]Profound ment retrd wth statement no or min impairm behav +Eu731,[X]Profound ment retard sig impairmnt behav req attent/treat +Eu73y,"[X]Profound mental retardation, other impairments of behavr" +Eu73z,[X]Prfnd mental retardation without mention impairment behav +Eu7y.,[X]Other mental retardation +Eu7y0,[X]Oth mental retard with statement no or min impairm behav +Eu7y1,[X]Oth mental retard sig impairment behav req attent/treatmt +Eu7yy,"[X]Other mental retardation, other impairments of behaviour" +Eu7yz,[X]Other mental retardation without mention impairment behav +Eu7z.,[X] (Unspec mental retard) or (mental defic [& subnorm] NOS) +Eu7z0,[X]Unsp mental retard with statement no or min impairm behav +Eu7z1,[X]Unsp mentl retard sig impairment behav req attent/treatmt +Eu7zy,"[X]Unspecified mental retardatn, other impairments of behav" +Eu7zz,[X]Unsp mental retardation without mention impairment behav +Eu81z,"[X]Developmental disorder of scholastic skills, unspecified" +XE1a2,[X]Unspecified mental retardation +XE2a3,"Mild mental retardation, IQ in range 50-70" +Xa0ER,Educationally subnormal +Xa1aW,Borderline mental retardation +Xa3HI,Severely educationally subnormal +XaKYb,On learning disability register +XaQZ3,Moderate learning disability +XaQZ4,Severe learning disability +XaREt,Mild learning disability +XaREu,Profound learning disability +XaaiS,Specific learning disability +Xabk1,Significant learning disability +Y1642,Other Mental Disability +Y9981,Profound mental retardation +YA841,Severe learning disability \ No newline at end of file diff --git a/codelists/opensafely-lung-cancer-snomed.csv b/codelists/opensafely-lung-cancer-snomed.csv new file mode 100644 index 0000000..d4a7bc4 --- /dev/null +++ b/codelists/opensafely-lung-cancer-snomed.csv @@ -0,0 +1,599 @@ +id,name,active,notes +187862007,Malignant neoplasm of upper lobe of lung (disorder),y,direct mapping +112677002,Bronchiolo-alveolar adenocarcinoma (morphologic abnormality),y,direct mapping +363493006,Malignant tumor of bronchus (disorder),y,direct mapping +372111007,"Carcinoma of lower lobe, bronchus or lung (disorder)",y,direct mapping +315006004,Metastasis from malignant tumor of lung (disorder),y,direct mapping +372065009,Malignant neoplasm of main bronchus (disorder),y,direct mapping +109378008,"Mesothelioma (malignant, clinical disorder) (disorder)",y,direct mapping +449308006,Malignant neoplasm of visceral pleura (disorder),y,direct mapping +254632001,Small cell carcinoma of lung (disorder),y,direct mapping +128632008,Non-small cell carcinoma (morphologic abnormality),y,direct mapping +254633006,Oat cell carcinoma of lung (disorder),y,direct mapping +93827000,Primary malignant neoplasm of hilus of lung (disorder),y,direct mapping +187868006,"Malignant neoplasm of lower lobe, bronchus or lung (disorder)",y,direct mapping +254620000,Squamous cell carcinoma of trachea (disorder),y,direct mapping +254619006,Adenoid cystic carcinoma of trachea (disorder),y,direct mapping +314954002,Local recurrence of malignant tumor of lung (disorder),y,direct mapping +269464000,"Malignant neoplasm of upper lobe, bronchus or lung (disorder)",y,direct mapping +239297008,Lymphomatoid granulomatosis of the lung (disorder),y,direct mapping +278065000,Pancoast's syndrome (disorder),y,direct mapping +187853005,Malignant neoplasm of cartilage of trachea (disorder),y,direct mapping +1090881000000100,Malignant neoplasm of bronchus or lung (disorder),y,direct mapping +187865009,Malignant neoplasm of middle lobe bronchus (disorder),y,direct mapping +253003009,Carcinoid bronchial adenoma (disorder),y,direct mapping +449067008,Malignant neoplasm of parietal pleura (disorder),y,direct mapping +711414003,Primary clear cell adenocarcinoma of lung (disorder),y,direct mapping +254634000,Squamous cell carcinoma of lung (disorder),y,direct mapping +313356004,Squamous cell carcinoma of bronchus in right middle lobe (disorder),y,direct mapping +254627002,Carcinoid tumor of lung (disorder),y,direct mapping +187857006,Malignant neoplasm of carina of bronchus (disorder),y,direct mapping +109371002,Overlapping malignant neoplasm of bronchus and lung (disorder),y,direct mapping +254629004,Large cell carcinoma of lung (disorder),y,direct mapping +93880001,Primary malignant neoplasm of lung (disorder),y,direct mapping +363432004,Malignant tumor of trachea (disorder),y,direct mapping +254645002,Malignant mesothelioma of pleura (disorder),y,direct mapping +254635004,Epithelioid hemangioendothelioma of lung (disorder),y,direct mapping +449096009,Malignant neoplasm of respiratory system (disorder),y,direct mapping +187869003,Malignant neoplasm of lower lobe bronchus (disorder),y,direct mapping +187854004,Malignant neoplasm of mucosa of trachea (disorder),y,direct mapping +233940007,Pulmonary tumor embolism (disorder),y,direct mapping +5958006,"Small cell carcinoma, intermediate cell (morphologic abnormality)",y,direct mapping +74042001,"Small cell carcinoma, fusiform cell (morphologic abnormality)",y,direct mapping +43149009,Pulmonary blastoma (morphologic abnormality),y,direct mapping +313354001,Squamous cell carcinoma of bronchus in left upper lobe (disorder),y,direct mapping +254638002,Pancoast tumor (disorder),y,direct mapping +313353007,Squamous cell carcinoma of bronchus in left lower lobe (disorder),y,direct mapping +254625005,Malignant tumor of lung parenchyma (disorder),y,direct mapping +448993007,Malignant epithelial neoplasm of lung (disorder),y,direct mapping +187861000,Malignant neoplasm of upper lobe bronchus (disorder),y,direct mapping +187864008,"Malignant neoplasm of middle lobe, bronchus or lung (disorder)",y,direct mapping +36310008,Alveolar adenocarcinoma (morphologic abnormality),y,direct mapping +76817009,Oat cell carcinoma (morphologic abnormality),y,direct mapping +254622008,Squamous cell carcinoma of bronchus (disorder),y,direct mapping +363433009,Malignant tumor of pleura (disorder),y,direct mapping +254626006,Adenocarcinoma of lung (disorder),y,direct mapping +254628007,Carcinoma of lung parenchyma (disorder),y,direct mapping +254631008,Giant cell carcinoma of lung (disorder),y,direct mapping +372136001,"Carcinoma of upper lobe, bronchus or lung (disorder)",y,direct mapping +313355000,Squamous cell carcinoma of bronchus in right lower lobe (disorder),y,direct mapping +430621000,Malignant neoplasm of lower respiratory tract (disorder),y,direct mapping +254637007,Non-small cell lung cancer (disorder),y,direct mapping +21326004,Combined small cell carcinoma (morphologic abnormality),y,direct mapping +363358000,Malignant tumor of lung (disorder),y,direct mapping +187870002,Malignant neoplasm of lower lobe of lung (disorder),y,direct mapping +187866005,Malignant neoplasm of middle lobe of lung (disorder),y,direct mapping +93734005,Primary malignant neoplasm of bronchus (disorder),y,direct mapping +313357008,Squamous cell carcinoma of bronchus in right upper lobe (disorder),y,direct mapping +372135002,"Primary malignant neoplasm of upper lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +254503007,Malignant tumor of inferior surface of soft palate (disorder),y,descendant of concept mapped from leaf +94102002,Primary malignant neoplasm of tonsillar fossa (disorder),y,descendant of concept mapped from leaf +109856007,Malignant mesothelioma of mesentery (disorder),y,descendant of concept mapped from leaf +187844003,Malignant neoplasm of cricoid cartilage (disorder),y,descendant of concept mapped from leaf +109369002,Overlapping malignant neoplasm of larynx (disorder),y,descendant of concept mapped from leaf +425048006,"Non-small cell carcinoma of lung, TNM stage 2 (disorder)",y,descendant of concept mapped from leaf +363423001,Malignant tumor of nasal septum (disorder),y,descendant of concept mapped from leaf +707389001,Primary clear cell squamous cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +109383000,Malignant mesothelioma of pericardium (disorder),y,descendant of concept mapped from leaf +93772000,Primary malignant neoplasm of diaphragm (disorder),y,descendant of concept mapped from leaf +424970000,"Large cell carcinoma of lung, TNM stage 3 (disorder)",y,descendant of concept mapped from leaf +707358000,Primary squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +94232001,Secondary malignant neoplasm of bronchus of right upper lobe (disorder),y,descendant of concept mapped from leaf +93687001,Primary malignant neoplasm of base of tongue (disorder),y,descendant of concept mapped from leaf +707337006,Primary adenocarcinoma of accessory sinus (disorder),y,descendant of concept mapped from leaf +254639005,Carcinoma in situ of lung parenchyma (disorder),y,descendant of concept mapped from leaf +187830009,Malignant neoplasm of nasal conchae (disorder),y,descendant of concept mapped from leaf +707587000,Primary carcinoma ex pleomorphic adenoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707672001,Pleuropulmonary blastoma type II (disorder),y,descendant of concept mapped from leaf +254435009,Carcinoma of soft palate (disorder),y,descendant of concept mapped from leaf +372103002,Carcinoma of glottis (disorder),y,descendant of concept mapped from leaf +363376007,Malignant tumor of base of tongue (disorder),y,descendant of concept mapped from leaf +94238002,Secondary malignant neoplasm of carina (disorder),y,descendant of concept mapped from leaf +422541001,Undifferentiated carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +94679009,Secondary malignant neoplasm of vocal cord (disorder),y,descendant of concept mapped from leaf +707451005,Primary adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +94067008,Primary malignant neoplasm of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +707409003,Primary acinar cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +424132000,"Non-small cell carcinoma of lung, TNM stage 1 (disorder)",y,descendant of concept mapped from leaf +707580003,Primary basaloid carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +93739000,Primary malignant neoplasm of carina (disorder),y,descendant of concept mapped from leaf +363400004,Malignant tumor of postcricoid region (disorder),y,descendant of concept mapped from leaf +707487003,Primary giant cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +707345001,Primary carcinoma of accessory sinus (disorder),y,descendant of concept mapped from leaf +94523002,Secondary malignant neoplasm of right middle lobe of lung (disorder),y,descendant of concept mapped from leaf +363377003,Malignant tumor of lingual tonsil (disorder),y,descendant of concept mapped from leaf +707670009,Pleuropulmonary blastoma (disorder),y,descendant of concept mapped from leaf +94656008,Secondary malignant neoplasm of upper respiratory tract (disorder),y,descendant of concept mapped from leaf +94334003,Secondary malignant neoplasm of hypopharynx (disorder),y,descendant of concept mapped from leaf +189815007,Pulmonary blastoma (disorder),y,descendant of concept mapped from leaf +254436005,Carcinoma of uvula (disorder),y,descendant of concept mapped from leaf +707494000,Primary verrucous carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +254520006,Malignant tumor of infrahyoid epiglottis (disorder),y,descendant of concept mapped from leaf +707471001,Primary clear cell adenocarcinoma of trachea (disorder),y,descendant of concept mapped from leaf +707703001,Primary squamous cell carcinoma of postcricoid region (disorder),y,descendant of concept mapped from leaf +94118008,Primary malignant neoplasm of upper respiratory tract (disorder),y,descendant of concept mapped from leaf +722529000,Primary malignant epithelial neoplasm of nasopharynx (disorder),y,descendant of concept mapped from leaf +363430007,Malignant tumor of subglottis (disorder),y,descendant of concept mapped from leaf +707388009,Primary squamous cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +94170009,Secondary malignant neoplasm of anterior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +707353009,Primary squamous cell carcinoma of accessory sinus (disorder),y,descendant of concept mapped from leaf +109855006,Malignant mesothelioma of pelvic peritoneum (disorder),y,descendant of concept mapped from leaf +707538002,Primary squamous cell carcinoma of vallecula (disorder),y,descendant of concept mapped from leaf +363397008,Malignant tumor of roof of nasopharynx (disorder),y,descendant of concept mapped from leaf +707705008,Nonkeratinizing carcinoma of the nasopharynx (disorder),y,descendant of concept mapped from leaf +363487003,Malignant tumor of aryepiglottic fold - laryngeal aspect (disorder),y,descendant of concept mapped from leaf +93729006,Primary malignant neoplasm of bronchus of left lower lobe (disorder),y,descendant of concept mapped from leaf +707475005,Primary adenocarcinoma of trachea (disorder),y,descendant of concept mapped from leaf +109854005,Malignant mesothelioma of parietal peritoneum (disorder),y,descendant of concept mapped from leaf +707349007,Primary carcinoma of frontal sinus (disorder),y,descendant of concept mapped from leaf +423464009,Squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707342003,Primary adenocarcinoma of ethmoidal sinus (disorder),y,descendant of concept mapped from leaf +303012000,Malignant tumor of posterior wall of hypopharynx (disorder),y,descendant of concept mapped from leaf +707427000,Primary verrucous carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +67811000119102,"Primary small cell malignant neoplasm of lung, TNM stage 1 (disorder)",y,descendant of concept mapped from leaf +187716008,Malignant tumor of Waldeyer's ring (disorder),y,descendant of concept mapped from leaf +363388009,Malignant tumor of soft palate (disorder),y,descendant of concept mapped from leaf +254509006,Malignant tumor of anterior commissure (disorder),y,descendant of concept mapped from leaf +707628004,Overlapping squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +93868009,Primary malignant neoplasm of lingual tonsil (disorder),y,descendant of concept mapped from leaf +93732009,Primary malignant neoplasm of bronchus of right middle lobe (disorder),y,descendant of concept mapped from leaf +422758009,Carcinoma of nasal meatus (disorder),y,descendant of concept mapped from leaf +707583001,Primary adenosquamous carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +372141009,Carcinoma of vocal cord (disorder),y,descendant of concept mapped from leaf +721607006,Primary undifferentiated carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +110013004,Overlapping malignant neoplasm of tonsil (disorder),y,descendant of concept mapped from leaf +94272005,Secondary malignant neoplasm of diaphragm (disorder),y,descendant of concept mapped from leaf +67841000119103,"Primary small cell malignant neoplasm of lung, TNM stage 4 (disorder)",y,descendant of concept mapped from leaf +363401000,Malignant tumor of pyriform fossa (disorder),y,descendant of concept mapped from leaf +94142007,Primary malignant neoplasm of vomer (disorder),y,descendant of concept mapped from leaf +707344002,Primary adenocarcinoma of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +707403002,Primary fetal adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +93662008,Primary malignant neoplasm of adenoid (disorder),y,descendant of concept mapped from leaf +707704007,Primary squamous cell carcinoma of pyriform sinus (disorder),y,descendant of concept mapped from leaf +274085008,Tonsil carcinoma (disorder),y,descendant of concept mapped from leaf +94155008,Secondary malignant neoplasm of accessory sinus (disorder),y,descendant of concept mapped from leaf +1078931000119107,Primary adenocarcinoma of lower lobe of right lung (disorder),y,descendant of concept mapped from leaf +423600008,"Large cell carcinoma of lung, TNM stage 4 (disorder)",y,descendant of concept mapped from leaf +93816002,Primary malignant neoplasm of glottis (disorder),y,descendant of concept mapped from leaf +707383000,Primary mucinous cystadenocarcinoma of trachea (disorder),y,descendant of concept mapped from leaf +707454002,Primary basaloid squamous cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +94367004,Secondary malignant neoplasm of laryngeal aspect of interarytenoid fold (disorder),y,descendant of concept mapped from leaf +15956181000119102,Secondary adenocarcinoma of bilateral lungs (disorder),y,descendant of concept mapped from leaf +698288007,Malignant melanoma of maxillary sinus (disorder),y,descendant of concept mapped from leaf +187692001,Malignant tumor of nasopharynx (disorder),y,descendant of concept mapped from leaf +363426009,Malignant tumor of ethmoid sinus (disorder),y,descendant of concept mapped from leaf +707489000,Primary spindle cell squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +93848003,Primary malignant neoplasm of junctional zone of tongue (disorder),y,descendant of concept mapped from leaf +707590006,Primary acinar cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707421004,Primary undifferentiated carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +242862004,Secondary malignant neoplasm of nasopharyngeal wall (disorder),y,descendant of concept mapped from leaf +94680007,Secondary malignant neoplasm of vomer (disorder),y,descendant of concept mapped from leaf +449248000,Nasopharyngeal carcinoma (disorder),y,descendant of concept mapped from leaf +707407001,Primary signet ring cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +707411007,Primary papillary adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +93948004,Primary malignant neoplasm of parietal pleura (disorder),y,descendant of concept mapped from leaf +93659005,Primary malignant neoplasm of accessory sinus (disorder),y,descendant of concept mapped from leaf +423295000,"Squamous cell carcinoma of lung, TNM stage 1 (disorder)",y,descendant of concept mapped from leaf +707391009,Primary papillary squamous cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +109366009,Overlapping malignant neoplasm of accessory sinuses (disorder),y,descendant of concept mapped from leaf +448990005,Malignant epithelial neoplasm of nasal cavity (disorder),y,descendant of concept mapped from leaf +7391000119103,Primary adenoid cystic carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +703230006,Non-small cell lung cancer without mutation in epidermal growth factor receptor (disorder),y,descendant of concept mapped from leaf +683991000119103,Extensive stage primary small cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +707360003,Primary lymphoepithelial carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +707591005,Primary mucoepidermoid carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707377003,Primary signet ring cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +371994002,Primary malignant neoplasm of laryngeal aspect of aryepiglottic fold (disorder),y,descendant of concept mapped from leaf +187702003,Malignant tumor of nasopharyngeal soft palate surface (disorder),y,descendant of concept mapped from leaf +363488008,Malignant tumor of false cord (disorder),y,descendant of concept mapped from leaf +448868009,Malignant neoplasm of lateral wall of oropharynx (disorder),y,descendant of concept mapped from leaf +363422006,Malignant tumor of nasal cavity (disorder),y,descendant of concept mapped from leaf +707595001,Primary mucinous cystadenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +698285005,Malignant melanoma of ethmoid sinus (disorder),y,descendant of concept mapped from leaf +733844008,Neuroendocrine type combined small cell carcinoma (morphologic abnormality),y,descendant of concept mapped from leaf +94581003,Secondary malignant neoplasm of soft palate (disorder),y,descendant of concept mapped from leaf +372112000,"Primary malignant neoplasm of middle lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +94376006,Secondary malignant neoplasm of left upper lobe of lung (disorder),y,descendant of concept mapped from leaf +285605009,Metastasis to pleura of unknown primary (disorder),y,descendant of concept mapped from leaf +707584007,Primary lymphoepithelial carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707357005,Primary squamous cell carcinoma of laryngeal cartilage (disorder),y,descendant of concept mapped from leaf +707484005,Primary adenoid squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +707395000,Primary adenocarcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +707384006,Primary solid carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +423121009,"Non-small cell carcinoma of lung, TNM stage 4 (disorder)",y,descendant of concept mapped from leaf +707455001,Primary papillary squamous cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +707397008,Primary basal cell adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707385007,Primary undifferentiated carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +187675005,Malignant tumor of tonsillar pillar (disorder),y,descendant of concept mapped from leaf +93830007,Primary malignant neoplasm of hypopharyngeal aspect of interarytenoid fold (disorder),y,descendant of concept mapped from leaf +94104001,Primary malignant neoplasm of trachea (disorder),y,descendant of concept mapped from leaf +93992002,Primary malignant neoplasm of right middle lobe of lung (disorder),y,descendant of concept mapped from leaf +1078881000119102,Primary adenocarcinoma of lower lobe of left lung (disorder),y,descendant of concept mapped from leaf +707453008,Primary clear cell squamous cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +109853004,Malignant mesothelioma of peritoneum (disorder),y,descendant of concept mapped from leaf +94677006,Secondary malignant neoplasm of vestibule of nose (disorder),y,descendant of concept mapped from leaf +94140004,Primary malignant neoplasm of visceral pleura (disorder),y,descendant of concept mapped from leaf +353741000119106,Secondary malignant neoplasm of left lung (disorder),y,descendant of concept mapped from leaf +372105009,Carcinoma of supraglottis (disorder),y,descendant of concept mapped from leaf +707425008,Primary adenoid squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +94333009,Secondary malignant neoplasm of hypopharyngeal aspect of interarytenoid fold (disorder),y,descendant of concept mapped from leaf +423318000,Adenoid cystic carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +93730001,Primary malignant neoplasm of bronchus of left upper lobe (disorder),y,descendant of concept mapped from leaf +707354003,Primary squamous cell carcinoma of maxillary sinus (disorder),y,descendant of concept mapped from leaf +707464006,Primary myoepithelial carcinoma of lung (disorder),y,descendant of concept mapped from leaf +93933005,Primary malignant neoplasm of oropharynx (disorder),y,descendant of concept mapped from leaf +94399005,Secondary malignant neoplasm of main bronchus (disorder),y,descendant of concept mapped from leaf +94368009,Secondary malignant neoplasm of laryngeal commissure (disorder),y,descendant of concept mapped from leaf +94458003,Secondary malignant neoplasm of tonsil (disorder),y,descendant of concept mapped from leaf +707674000,Primary malignant epithelial neoplasm of trachea (disorder),y,descendant of concept mapped from leaf +94329002,Secondary malignant neoplasm of hilus of lung (disorder),y,descendant of concept mapped from leaf +707582006,Primary spindle cell squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +187685006,Malignant neoplasm of junctional region of epiglottis (disorder),y,descendant of concept mapped from leaf +707423001,Primary basaloid carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +187831008,Malignant tumor of nasal vestibule (disorder),y,descendant of concept mapped from leaf +423468007,"Squamous cell carcinoma of lung, TNM stage 2 (disorder)",y,descendant of concept mapped from leaf +707627009,Primary salivary gland type carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +707479004,Primary adenocarcinoma of subglottis (disorder),y,descendant of concept mapped from leaf +707529004,Overlapping squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +363399006,Malignant tumor of hypopharynx (disorder),y,descendant of concept mapped from leaf +94372008,Secondary malignant neoplasm of lateral wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +707457009,Primary spindle cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +94607007,Secondary malignant neoplasm of subglottis (disorder),y,descendant of concept mapped from leaf +94078000,Primary malignant neoplasm of superior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +94370000,Secondary malignant neoplasm of larynx (disorder),y,descendant of concept mapped from leaf +721605003,Primary squamous cell carcinoma of overlapping lesion of accessory sinuses (disorder),y,descendant of concept mapped from leaf +93971002,Primary malignant neoplasm of posterior wall of oropharynx (disorder),y,descendant of concept mapped from leaf +1078961000119104,Primary adenocarcinoma of upper lobe of right lung (disorder),y,descendant of concept mapped from leaf +94231008,Secondary malignant neoplasm of bronchus of right middle lobe (disorder),y,descendant of concept mapped from leaf +1078901000119100,Primary adenocarcinoma of upper lobe of left lung (disorder),y,descendant of concept mapped from leaf +285604008,Metastasis to lung of unknown primary (disorder),y,descendant of concept mapped from leaf +722530005,Primary squamous cell carcinoma of pharyngeal tonsil (disorder),y,descendant of concept mapped from leaf +698044008,Malignant melanoma of palatine arch (disorder),y,descendant of concept mapped from leaf +94166001,Secondary malignant neoplasm of anterior aspect of epiglottis (disorder),y,descendant of concept mapped from leaf +93882009,Primary malignant neoplasm of main bronchus (disorder),y,descendant of concept mapped from leaf +449254004,Malignant epithelial neoplasm of pharynx (disorder),y,descendant of concept mapped from leaf +94373003,Secondary malignant neoplasm of lateral wall of oropharynx (disorder),y,descendant of concept mapped from leaf +424938000,"Large cell carcinoma of lung, TNM stage 1 (disorder)",y,descendant of concept mapped from leaf +371995001,Primary malignant neoplasm of larynx (disorder),y,descendant of concept mapped from leaf +408648004,Squamous cell carcinoma of epiglottis (disorder),y,descendant of concept mapped from leaf +94375005,Secondary malignant neoplasm of left lower lobe of lung (disorder),y,descendant of concept mapped from leaf +94473002,Secondary malignant neoplasm of parietal pleura (disorder),y,descendant of concept mapped from leaf +94507002,Secondary malignant neoplasm of pyriform sinus (disorder),y,descendant of concept mapped from leaf +707408006,Primary small cell non-keratinizing squamous cell carcinoma of lung (disorder),y,descendant of concept mapped from leaf +18121000119104,Primary squamous cell carcinoma of palatine tonsil (disorder),y,descendant of concept mapped from leaf +707579001,Primary basaloid squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707406005,Primary mucoepidermoid carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +697993003,Undifferentiated carcinoma of nasal sinus (disorder),y,descendant of concept mapped from leaf +363506007,Malignant tumor of nasal sinuses (disorder),y,descendant of concept mapped from leaf +707392002,Primary giant cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +94129007,Primary malignant neoplasm of uvula (disorder),y,descendant of concept mapped from leaf +15956381000119100,Adenocarcinoma of right lung (disorder),y,descendant of concept mapped from leaf +94233006,Secondary malignant neoplasm of bronchus (disorder),y,descendant of concept mapped from leaf +187644001,Malignant tumor of junctional zone of tongue (disorder),y,descendant of concept mapped from leaf +93787005,Primary malignant neoplasm of ethmoidal sinus (disorder),y,descendant of concept mapped from leaf +448214005,Malignant epithelial neoplasm of oropharynx (disorder),y,descendant of concept mapped from leaf +440173001,Nonsquamous nonsmall cell neoplasm of lung (disorder),y,descendant of concept mapped from leaf +723182009,Primary squamous cell carcinoma of nasal cavity (disorder),y,descendant of concept mapped from leaf +707426009,Primary papillary squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +363392002,Malignant tumor of oropharynx (disorder),y,descendant of concept mapped from leaf +707686002,Primary squamous cell carcinoma of posterior wall of hypopharynx (disorder),y,descendant of concept mapped from leaf +722527003,Primary malignant neuroendocrine neoplasm of bronchus (disorder),y,descendant of concept mapped from leaf +254526000,Malignant tumor of laryngeal ventricle (disorder),y,descendant of concept mapped from leaf +707399006,Primary papillary adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +93966009,Primary malignant neoplasm of pleura (disorder),y,descendant of concept mapped from leaf +255075004,Malignant tumor of lateral nasal wall (disorder),y,descendant of concept mapped from leaf +353561000119103,Secondary malignant neoplasm of right lung (disorder),y,descendant of concept mapped from leaf +94639000,Secondary malignant neoplasm of tonsillar fossa (disorder),y,descendant of concept mapped from leaf +724060008,Malignant neoplasm of right upper lobe of lung (disorder),y,descendant of concept mapped from leaf +440527006,Primary squamous cell carcinoma of naris (disorder),y,descendant of concept mapped from leaf +187683004,Malignant neoplasm of glossoepiglottic fold (disorder),y,descendant of concept mapped from leaf +707586009,Primary myoepithelial carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +187698002,Malignant tumor of opening of auditory tube (disorder),y,descendant of concept mapped from leaf +707673006,Pleuropulmonary blastoma type III (disorder),y,descendant of concept mapped from leaf +372110008,"Primary malignant neoplasm of lower lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +408649007,Squamous cell carcinoma of pharynx (disorder),y,descendant of concept mapped from leaf +94678001,Secondary malignant neoplasm of visceral pleura (disorder),y,descendant of concept mapped from leaf +707458004,Primary pleomorphic carcinoma of lung (disorder),y,descendant of concept mapped from leaf +94495003,Secondary malignant neoplasm of postcricoid region (disorder),y,descendant of concept mapped from leaf +94498001,Secondary malignant neoplasm of posterior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +187842004,Malignant tumor of supraglottis (disorder),y,descendant of concept mapped from leaf +67831000119107,"Primary small cell malignant neoplasm of lung, TNM stage 3 (disorder)",y,descendant of concept mapped from leaf +241861008,Metastatic malignant neoplasm to nasopharynx (disorder),y,descendant of concept mapped from leaf +94318001,Secondary malignant neoplasm of glottis (disorder),y,descendant of concept mapped from leaf +722827008,Primary synovial sarcoma of respiratory organ (disorder),y,descendant of concept mapped from leaf +707532001,Primary squamous cell carcinoma of posterior wall of oropharynx (disorder),y,descendant of concept mapped from leaf +94158005,Secondary malignant neoplasm of adenoid (disorder),y,descendant of concept mapped from leaf +93784003,Primary malignant neoplasm of epiglottis (disorder),y,descendant of concept mapped from leaf +94358004,Secondary malignant neoplasm of junctional region of epiglottis (disorder),y,descendant of concept mapped from leaf +94366008,Secondary malignant neoplasm of laryngeal aspect of aryepiglottic fold (disorder),y,descendant of concept mapped from leaf +1090231000000103,Malignant neoplasm of respiratory tract (disorder),y,descendant of concept mapped from leaf +372120003,Carcinoma of main bronchus (disorder),y,descendant of concept mapped from leaf +724056005,Malignant neoplasm of lower lobe of right lung (disorder),y,descendant of concept mapped from leaf +449417005,Malignant epithelial neoplasm of nasal septum (disorder),y,descendant of concept mapped from leaf +372030009,Primary malignant neoplasm of vocal cord (disorder),y,descendant of concept mapped from leaf +94515004,Secondary malignant neoplasm of respiratory tract (disorder),y,descendant of concept mapped from leaf +698011002,Keratinizing squamous cell carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +426964009,"Non-small cell lung cancer, positive for epidermal growth factor receptor expression (disorder)",y,descendant of concept mapped from leaf +94144008,Primary malignant neoplasm of Waldeyer's ring (disorder),y,descendant of concept mapped from leaf +93831006,Primary malignant neoplasm of hypopharynx (disorder),y,descendant of concept mapped from leaf +363389001,Malignant tumor of uvula (disorder),y,descendant of concept mapped from leaf +707697002,Primary squamous cell carcinoma of hypopharyngeal aspect of aryepiglottic fold (disorder),y,descendant of concept mapped from leaf +448372003,Non-Hodgkin's lymphoma of lung (disorder),y,descendant of concept mapped from leaf +733144006,Malignant epithelial neoplasm of bronchus (disorder),y,descendant of concept mapped from leaf +93862005,Primary malignant neoplasm of lateral wall of oropharynx (disorder),y,descendant of concept mapped from leaf +94613003,Secondary malignant neoplasm of superior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +448672006,Follicular non-Hodgkin's lymphoma of lung (disorder),y,descendant of concept mapped from leaf +718200007,Primary pulmonary lymphoma (disorder),y,descendant of concept mapped from leaf +707593008,Primary salivary gland-type tumour of oropharynx (disorder),y,descendant of concept mapped from leaf +722511005,Primary rhabdomyosarcoma of respiratory organ (disorder),y,descendant of concept mapped from leaf +94103007,Primary malignant neoplasm of tonsillar pillar (disorder),y,descendant of concept mapped from leaf +94075002,Primary malignant neoplasm of subglottis (disorder),y,descendant of concept mapped from leaf +94640003,Secondary malignant neoplasm of tonsillar pillar (disorder),y,descendant of concept mapped from leaf +707491008,Primary lymphoepithelial carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +363398003,Malignant tumor of lateral wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +363427000,Malignant tumor of frontal sinus (disorder),y,descendant of concept mapped from leaf +449292003,Non-Hodgkin's lymphoma of tonsil (disorder),y,descendant of concept mapped from leaf +94332004,Secondary malignant neoplasm of hypopharyngeal aspect of aryepiglottic fold (disorder),y,descendant of concept mapped from leaf +363486007,Malignant tumor of vocal cord (disorder),y,descendant of concept mapped from leaf +93986008,Primary malignant neoplasm of respiratory tract (disorder),y,descendant of concept mapped from leaf +187681002,Malignant neoplasm of anterior epiglottis (disorder),y,descendant of concept mapped from leaf +94391008,Secondary malignant neoplasm of lung (disorder),y,descendant of concept mapped from leaf +709031009,Malignant neoplasm of superior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +372104008,Carcinoma of subglottis (disorder),y,descendant of concept mapped from leaf +94369001,Secondary malignant neoplasm of laryngeal surface of epiglottis (disorder),y,descendant of concept mapped from leaf +449058008,Follicular non-Hodgkin's lymphoma of tonsil (disorder),y,descendant of concept mapped from leaf +94049001,Primary malignant neoplasm of soft palate (disorder),y,descendant of concept mapped from leaf +187694000,Malignant tumor of adenoid (disorder),y,descendant of concept mapped from leaf +707422006,Primary spindle cell squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +707398003,Primary polymorphous low grade adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707588005,Primary epithelial-myoepithelial carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +707466008,Primary adenoid cystic carcinoma of lung (disorder),y,descendant of concept mapped from leaf +707386008,Primary acinar cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +271943005,Carcinoma of base of tongue (disorder),y,descendant of concept mapped from leaf +707467004,Primary salivary gland type carcinoma of lung (disorder),y,descendant of concept mapped from leaf +363507003,Malignant neoplasm of pharynx (disorder),y,descendant of concept mapped from leaf +363425008,Malignant tumor of maxillary sinus (disorder),y,descendant of concept mapped from leaf +707469001,Primary non-mucinous bronchiolo-alveolar carcinoma of lung (disorder),y,descendant of concept mapped from leaf +254530002,Malignant tumor of parapharyngeal space (disorder),y,descendant of concept mapped from leaf +722510006,Primary rhabdomyosarcoma of pharynx (disorder),y,descendant of concept mapped from leaf +363395000,Malignant tumor of vallecula (disorder),y,descendant of concept mapped from leaf +449066004,Malignant neoplasm of upper respiratory tract (disorder),y,descendant of concept mapped from leaf +707452003,Primary mucinous adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +187688008,Malignant tumor of posterior wall of oropharynx (disorder),y,descendant of concept mapped from leaf +724058006,Malignant neoplasm of upper lobe of left lung (disorder),y,descendant of concept mapped from leaf +707346000,Primary carcinoma of ethmoidal sinus (disorder),y,descendant of concept mapped from leaf +735450006,Primary malignant neuroepitheliomatous neoplasm of nasal cavity (disorder),y,descendant of concept mapped from leaf +448665005,Malignant epithelial neoplasm of hypopharynx (disorder),y,descendant of concept mapped from leaf +94670008,Secondary malignant neoplasm of vallecula (disorder),y,descendant of concept mapped from leaf +707348004,Primary carcinoma of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +94296000,Secondary malignant neoplasm of false vocal cord (disorder),y,descendant of concept mapped from leaf +255119002,Lymphangitis carcinomatosa (disorder),y,descendant of concept mapped from leaf +94139001,Primary malignant neoplasm of vestibule of nose (disorder),y,descendant of concept mapped from leaf +187701005,Malignant neoplasm of floor of nasopharynx (disorder),y,descendant of concept mapped from leaf +255074000,Malignant tumor of nasal cavity and nasopharynx (disorder),y,descendant of concept mapped from leaf +707575007,Primary squamous cell carcinoma of supraglottis (disorder),y,descendant of concept mapped from leaf +254517003,Malignant tumor of suprahyoid epiglottis (disorder),y,descendant of concept mapped from leaf +187682009,"Malignant neoplasm of epiglottis, free border (disorder)",y,descendant of concept mapped from leaf +93967000,Primary malignant neoplasm of postcricoid region (disorder),y,descendant of concept mapped from leaf +275490009,Carcinoma of tongue base - dorsal surface (disorder),y,descendant of concept mapped from leaf +707473003,Primary mucinous adenocarcinoma of trachea (disorder),y,descendant of concept mapped from leaf +707470000,Primary mucinous bronchiolo-alveolar carcinoma of lung (disorder),y,descendant of concept mapped from leaf +363431006,Malignant tumor of laryngeal cartilage (disorder),y,descendant of concept mapped from leaf +187693006,Malignant tumor of posterior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +93674007,Primary malignant neoplasm of anterior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +707359008,Primary squamous cell carcinoma of ethmoidal sinus (disorder),y,descendant of concept mapped from leaf +707596000,Primary carcinosarcoma of lung (disorder),y,descendant of concept mapped from leaf +722528008,Primary malignant neuroendocrine neoplasm of lung (disorder),y,descendant of concept mapped from leaf +371988005,Primary malignant neoplasm of false vocal cord (disorder),y,descendant of concept mapped from leaf +372113005,"Carcinoma of middle lobe, bronchus or lung (disorder)",y,descendant of concept mapped from leaf +254513004,Malignant tumor of posterior commissure (disorder),y,descendant of concept mapped from leaf +109858008,Malignant mesothelioma of omentum (disorder),y,descendant of concept mapped from leaf +94616006,Secondary malignant neoplasm of supraglottis (disorder),y,descendant of concept mapped from leaf +402503002,Basal cell carcinoma of nasal columella (disorder),y,descendant of concept mapped from leaf +93670003,Primary malignant neoplasm of anterior aspect of epiglottis (disorder),y,descendant of concept mapped from leaf +707664003,Primary squamous cell carcinoma of glottis (disorder),y,descendant of concept mapped from leaf +94493005,Secondary malignant neoplasm of pleura (disorder),y,descendant of concept mapped from leaf +12240951000119107,Squamous cell carcinoma of left lung (disorder),y,descendant of concept mapped from leaf +93918002,Primary malignant neoplasm of nasal concha (disorder),y,descendant of concept mapped from leaf +707465007,Primary mucoepidermoid carcinoma of lung (disorder),y,descendant of concept mapped from leaf +721560002,Primary adenocarcinoma of nasal cavity (disorder),y,descendant of concept mapped from leaf +285598005,Metastasis to trachea of unknown primary (disorder),y,descendant of concept mapped from leaf +698040004,Malignant melanoma of nasal cavity (disorder),y,descendant of concept mapped from leaf +707581004,Primary papillary squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +67821000119109,"Primary small cell malignant neoplasm of lung, TNM stage 2 (disorder)",y,descendant of concept mapped from leaf +707356001,Primary squamous cell carcinoma of frontal sinus (disorder),y,descendant of concept mapped from leaf +707535004,Primary squamous cell carcinoma of lateral wall of oropharynx (disorder),y,descendant of concept mapped from leaf +698048006,Undifferentiated nonkeratinizing squamous cell carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +94132005,Primary malignant neoplasm of vallecula (disorder),y,descendant of concept mapped from leaf +448371005,Non-Hodgkin's lymphoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +707343008,Primary adenocarcinoma of frontal sinus (disorder),y,descendant of concept mapped from leaf +109832008,Overlapping malignant neoplasm of oropharynx (disorder),y,descendant of concept mapped from leaf +707430007,Overlapping squamous cell carcinoma of laryngeal cartilage (disorder),y,descendant of concept mapped from leaf +707394001,Primary spindle cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +94228007,Secondary malignant neoplasm of bronchus of left lower lobe (disorder),y,descendant of concept mapped from leaf +707539005,Primary adenoid cystic carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +94524008,Secondary malignant neoplasm of right upper lobe of lung (disorder),y,descendant of concept mapped from leaf +93917007,Primary malignant neoplasm of nasal cavity (disorder),y,descendant of concept mapped from leaf +94230009,Secondary malignant neoplasm of bronchus of right lower lobe (disorder),y,descendant of concept mapped from leaf +187708004,Malignant tumor aryepiglottic fold - hypopharyngeal aspect (disorder),y,descendant of concept mapped from leaf +707592003,Primary infiltrating duct carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94310008,Secondary malignant neoplasm of frontal sinus (disorder),y,descendant of concept mapped from leaf +109390005,Kaposi's sarcoma of lung (disorder),y,descendant of concept mapped from leaf +422691006,Squamous cell carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +93731002,Primary malignant neoplasm of bronchus of right lower lobe (disorder),y,descendant of concept mapped from leaf +94499009,Secondary malignant neoplasm of posterior wall of oropharynx (disorder),y,descendant of concept mapped from leaf +707492001,Primary squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +405822008,Squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +707400004,Primary mucinous adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94080006,Primary malignant neoplasm of supraglottis (disorder),y,descendant of concept mapped from leaf +93808006,Primary malignant neoplasm of frontal sinus (disorder),y,descendant of concept mapped from leaf +707671008,Pleuropulmonary blastoma type I (disorder),y,descendant of concept mapped from leaf +187700006,Malignant tumor of anterior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +707472008,Primary papillary adenocarcinoma of trachea (disorder),y,descendant of concept mapped from leaf +724059003,Malignant neoplasm of lower lobe of left lung (disorder),y,descendant of concept mapped from leaf +93968005,Primary malignant neoplasm of posterior hypopharyngeal wall (disorder),y,descendant of concept mapped from leaf +707410008,Primary solid carcinoma of lung (disorder),y,descendant of concept mapped from leaf +723301009,Squamous non-small cell lung cancer (disorder),y,descendant of concept mapped from leaf +12240991000119102,Squamous cell carcinoma of right lung (disorder),y,descendant of concept mapped from leaf +707429002,Overlapping squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +707378008,Primary myoepithelial carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +93864006,Primary malignant neoplasm of lower lobe of left lung (disorder),y,descendant of concept mapped from leaf +187843009,Malignant neoplasm of arytenoid cartilage (disorder),y,descendant of concept mapped from leaf +722672002,Primary squamous cell carcinoma of base of tongue (disorder),y,descendant of concept mapped from leaf +707482009,Primary papillary squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +109374005,Overlapping malignant neoplasm of mediastinum and pleura (disorder),y,descendant of concept mapped from leaf +707350007,Malignant melanoma of accessory sinus (disorder),y,descendant of concept mapped from leaf +707585008,Primary squamous cell carcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94641004,Secondary malignant neoplasm of trachea (disorder),y,descendant of concept mapped from leaf +94002000,Primary malignant neoplasm of septum of nose (disorder),y,descendant of concept mapped from leaf +707576008,Primary squamous cell carcinoma of subglottis (disorder),y,descendant of concept mapped from leaf +94379004,Secondary malignant neoplasm of lingual tonsil (disorder),y,descendant of concept mapped from leaf +187846001,Malignant neoplasm of thyroid cartilage (disorder),y,descendant of concept mapped from leaf +703549009,"Small cell carcinoma, hypercalcemic type (morphologic abnormality)",y,descendant of concept mapped from leaf +94454001,Secondary malignant neoplasm of oropharynx (disorder),y,descendant of concept mapped from leaf +707396004,Primary oxyphilic adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +94522007,Secondary malignant neoplasm of right lower lobe of lung (disorder),y,descendant of concept mapped from leaf +422968005,"Non-small cell carcinoma of lung, TNM stage 3 (disorder)",y,descendant of concept mapped from leaf +94496002,Secondary malignant neoplasm of posterior hypopharyngeal wall (disorder),y,descendant of concept mapped from leaf +707401000,Primary clear cell adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +109368005,Overlapping malignant neoplasm of hypopharynx (disorder),y,descendant of concept mapped from leaf +93961004,Primary malignant neoplasm of pharynx (disorder),y,descendant of concept mapped from leaf +707379000,Primary mucoepidermoid carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +93857009,Primary malignant neoplasm of laryngeal commissure (disorder),y,descendant of concept mapped from leaf +707486007,Primary basaloid carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +707660007,Primary giant cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +94436000,Secondary malignant neoplasm of nasal cavity (disorder),y,descendant of concept mapped from leaf +448867004,Diffuse non-Hodgkin's lymphoma of lung (disorder),y,descendant of concept mapped from leaf +733358002,Primary squamous cell carcinoma of respiratory system (disorder),y,descendant of concept mapped from leaf +109370001,Primary malignant neoplasm of laryngeal cartilage (disorder),y,descendant of concept mapped from leaf +93991009,Primary malignant neoplasm of right lower lobe of lung (disorder),y,descendant of concept mapped from leaf +707528007,Primary squamous cell carcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +94599006,Secondary malignant neoplasm of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +372020000,Primary malignant neoplasm of tonsil (disorder),y,descendant of concept mapped from leaf +707481002,Primary basaloid squamous cell carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +422886007,Olfactory neuroblastoma (disorder),y,descendant of concept mapped from leaf +707339009,Primary adenocarcinoma of maxillary sinus (disorder),y,descendant of concept mapped from leaf +94229004,Secondary malignant neoplasm of bronchus of left upper lobe (disorder),y,descendant of concept mapped from leaf +423050000,"Large cell carcinoma of lung, TNM stage 2 (disorder)",y,descendant of concept mapped from leaf +276975007,Carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +93861003,Primary malignant neoplasm of lateral wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +94682004,Secondary malignant neoplasm of Waldeyer's ring (disorder),y,descendant of concept mapped from leaf +93993007,Primary malignant neoplasm of upper lobe of right lung (disorder),y,descendant of concept mapped from leaf +448319002,Diffuse non-Hodgkin's lymphoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +187838002,"Malignant neoplasm, overlapping lesion of accessory sinuses (disorder)",y,descendant of concept mapped from leaf +722673007,Primary squamous cell carcinoma of lingual tonsil (disorder),y,descendant of concept mapped from leaf +94359007,Secondary malignant neoplasm of junctional zone of tongue (disorder),y,descendant of concept mapped from leaf +707662004,Primary basaloid squamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +187845002,Malignant neoplasm of cuneiform cartilage (disorder),y,descendant of concept mapped from leaf +93978008,Primary malignant neoplasm of pyriform sinus (disorder),y,descendant of concept mapped from leaf +707347009,Primary carcinoma of maxillary sinus (disorder),y,descendant of concept mapped from leaf +707405009,Primary adenosquamous carcinoma of lung (disorder),y,descendant of concept mapped from leaf +109367000,Overlapping malignant neoplasm of nasopharynx (disorder),y,descendant of concept mapped from leaf +363394001,Malignant tumor of tonsillar fossa (disorder),y,descendant of concept mapped from leaf +93865007,Primary malignant neoplasm of upper lobe of left lung (disorder),y,descendant of concept mapped from leaf +707485006,Primary adenosquamous carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +721606002,Primary adenocarcinoma of overlapping lesion of accessory sinuses (disorder),y,descendant of concept mapped from leaf +707424007,Primary adenosquamous cell carcinoma of larynx (disorder),y,descendant of concept mapped from leaf +707362006,Malignant melanoma of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +94184004,Secondary malignant neoplasm of base of tongue (disorder),y,descendant of concept mapped from leaf +449219006,Follicular non-Hodgkin's lymphoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +707456000,Primary undifferentiated carcinoma of lung (disorder),y,descendant of concept mapped from leaf +240163000,Malignant neoplasm of nasopharyngeal wall (disorder),y,descendant of concept mapped from leaf +722425009,Reactive oxygen species 1 positive non-small cell lung cancer (disorder),y,descendant of concept mapped from leaf +707589002,Primary cystadenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +425376008,"Squamous cell carcinoma of lung, TNM stage 4 (disorder)",y,descendant of concept mapped from leaf +93858004,Primary malignant neoplasm of laryngeal surface of epiglottis (disorder),y,descendant of concept mapped from leaf +707468009,Primary mixed mucinous and non-mucinous bronchiolo-alveolar carcinoma of lung (disorder),y,descendant of concept mapped from leaf +94534004,Secondary malignant neoplasm of septum of nose (disorder),y,descendant of concept mapped from leaf +707393007,Primary adenosquamous carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +449173006,Diffuse non-Hodgkin's lymphoma of tonsil (disorder),y,descendant of concept mapped from leaf +94437009,Secondary malignant neoplasm of nasal concha (disorder),y,descendant of concept mapped from leaf +15956341000119105,Adenocarcinoma of left lung (disorder),y,descendant of concept mapped from leaf +285603002,Metastasis to bronchus of unknown primary (disorder),y,descendant of concept mapped from leaf +707380002,Primary salivary gland type carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +94667009,Secondary malignant neoplasm of uvula (disorder),y,descendant of concept mapped from leaf +254478004,Malignant tumor of inferior turbinate (disorder),y,descendant of concept mapped from leaf +707537007,Primary squamous cell carcinoma of anterior surface of epiglottis (disorder),y,descendant of concept mapped from leaf +707355002,Primary squamous cell carcinoma of sphenoidal sinus (disorder),y,descendant of concept mapped from leaf +707402007,Primary adenocarcinoma of oropharynx (disorder),y,descendant of concept mapped from leaf +726653000,Malignant carcinoid tumor of bronchus (disorder),y,descendant of concept mapped from leaf +363429002,Malignant tumor of larynx (disorder),y,descendant of concept mapped from leaf +707390005,Primary basaloid squamous cell carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +94406009,Secondary malignant neoplasm of maxillary sinus (disorder),y,descendant of concept mapped from leaf +703228009,Non-small cell lung cancer with mutation in epidermal growth factor receptor (disorder),y,descendant of concept mapped from leaf +707460002,Primary pseudosarcomatous carcinoma of lung (disorder),y,descendant of concept mapped from leaf +94288005,Secondary malignant neoplasm of ethmoidal sinus (disorder),y,descendant of concept mapped from leaf +187841006,Malignant tumor of glottis (disorder),y,descendant of concept mapped from leaf +403889000,Verrucous carcinoma of oral cavity (disorder),y,descendant of concept mapped from leaf +707493006,Primary lymphoepithelial carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +61471000119100,Basal cell carcinoma of naris (disorder),y,descendant of concept mapped from leaf +254484001,Malignant tumor of posterior margin of nasal septum and choanae (disorder),y,descendant of concept mapped from leaf +448509007,Transglottic malignant neoplasm of larynx (disorder),y,descendant of concept mapped from leaf +254459004,Malignant tumor of anterior pillar of fauces (disorder),y,descendant of concept mapped from leaf +254423005,Carcinoma of lingual tonsil (disorder),y,descendant of concept mapped from leaf +363393007,Malignant tumor of tonsil (disorder),y,descendant of concept mapped from leaf +93733004,Primary malignant neoplasm of bronchus of right upper lobe (disorder),y,descendant of concept mapped from leaf +707404008,Primary mixed subtype adenocarcinoma of lung (disorder),y,descendant of concept mapped from leaf +109384006,"Overlapping malignant neoplasm of heart, mediastinum and pleura (disorder)",y,descendant of concept mapped from leaf +94488007,Secondary malignant neoplasm of pharynx (disorder),y,descendant of concept mapped from leaf +733345003,Primary squamous cell carcinoma of pharynx (disorder),y,descendant of concept mapped from leaf +425230006,"Squamous cell carcinoma of lung, TNM stage 3 (disorder)",y,descendant of concept mapped from leaf +93889000,Primary malignant neoplasm of maxillary sinus (disorder),y,descendant of concept mapped from leaf +187631006,Malignant neoplasm of base of tongue dorsal surface (disorder),y,descendant of concept mapped from leaf +707495004,Primary squamous cell adenoid carcinoma of trachea (disorder),y,descendant of concept mapped from leaf +94284007,Secondary malignant neoplasm of epiglottis (disorder),y,descendant of concept mapped from leaf +363428005,Malignant tumor of sphenoid sinus (disorder),y,descendant of concept mapped from leaf +254481009,Malignant tumor of middle turbinate (disorder),y,descendant of concept mapped from leaf +707490009,Primary verrucous carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +423106003,Adenocarcinoma of nasopharynx (disorder),y,descendant of concept mapped from leaf +427038005,"Non-small cell lung cancer, negative for epidermal growth factor receptor expression (disorder)",y,descendant of concept mapped from leaf +187709007,Malignant neoplasm of posterior pharynx (disorder),y,descendant of concept mapped from leaf +1661000119106,Metastasis to lung from adenocarcinoma (disorder),y,descendant of concept mapped from leaf +93970001,Primary malignant neoplasm of posterior wall of nasopharynx (disorder),y,descendant of concept mapped from leaf +187697007,Malignant tumor of pharyngeal recess (disorder),y,descendant of concept mapped from leaf +707483004,Primary undifferentiated carcinoma of hypopharynx (disorder),y,descendant of concept mapped from leaf +93829002,Primary malignant neoplasm of hypopharyngeal aspect of aryepiglottic fold (disorder),y,descendant of concept mapped from leaf +707361004,Malignant melanoma of frontal sinus (disorder),y,descendant of concept mapped from leaf +566551000000105,Malignant neoplasm of oropharynx NOS (disorder),n,via Query Table +479031000000103,"[X]Malignant neoplasm of bronchus or lung, unspecified (disorder)",n,via Query Table +557101000000105,"Malignant neoplasm of lower lobe, bronchus or lung NOS (disorder)",n,via Query Table +397641000000107,[X]Malignant neoplasm of respiratory and intrathoracic organs (disorder),n,via Query Table +550101000000109,Malignant neoplasm of trachea NOS (disorder),n,via Query Table +566531000000103,"Malignant neoplasm of oropharynx, other specified sites (disorder)",n,via Query Table +190110008,"[X]Mesothelioma, unspecified (disorder)",n,via Query Table +559881000000101,Malignant neoplasm of anterior wall of nasopharynx NOS (disorder),n,via Query Table +557091000000102,"Malignant neoplasm of middle lobe, bronchus or lung NOS (disorder)",n,via Query Table +550081000000103,"Malignant neoplasm of larynx, other specified site (disorder)",n,via Query Table +634591000000105,Malignant neoplasm of laryngeal cartilage NOS (disorder),n,via Query Table +875391000000109,Non-small cell carcinoma,n,via Query Table +439161000000107,[X]Secondary malignant neoplasm of other and unspecified respiratory organs (disorder),n,via Query Table +561481000000106,Malignant neoplasm of tonsillar fossa NOS (disorder),n,via Query Table +573621000000103,Malignant neoplasm of pharynx unspecified (disorder),n,via Query Table +559871000000103,Malignant neoplasm of lateral wall of nasopharynx NOS (disorder),n,via Query Table +550111000000106,Malignant neoplasm of main bronchus NOS (disorder),n,via Query Table +561471000000109,Malignant neoplasm tonsil NOS (disorder),n,via Query Table +666541000000104,Malignant neoplasm of nasal cavities NOS (disorder),n,via Query Table +559181000000106,Malignant neoplasm of posterior wall of nasopharynx NOS (disorder),n,via Query Table +269567005,Ca trachea/bronchus/lung NOS (disorder),n,via Query Table +455771000000103,[X]Malignant neoplasm of ill-defined sites within the respiratory system (disorder),n,via Query Table +254630009,Clear cell carcinoma of lung (disorder),n,via Query Table +863141000000107,Non-small cell carcinoma (morphologic abnormality),n,via Query Table +254523008,Malignant tumor of arytenoid (disorder),n,via Query Table +390391000000109,"[X]Mesothelioma, unspecified (disorder)",n,via Query Table +190096000,[X]Malignant neoplasm of ill-defined sites within the respiratory system (disorder),n,via Query Table +691161000000101,Ca larynx - NOS (disorder),n,via Query Table +542031000000104,Malignant neoplasm of nasopharynx NOS (disorder),n,via Query Table +431561000000103,(Mesothelioma of lung) or ([X]mesothelioma of other sites),n,via Query Table +566521000000100,Malignant neoplasm of anterior epiglottis NOS (disorder),n,via Query Table +534671000000104,Malignant neoplasm of fixed part of tongue NOS (disorder),n,via Query Table +557131000000104,Malignant neoplasm of pleura NOS (disorder),n,via Query Table +187852000,"Malignant neoplasm of trachea, bronchus and lung (disorder)",n,via Query Table +557081000000104,"Malignant neoplasm of upper lobe, bronchus or lung NOS (disorder)",n,via Query Table +550091000000101,Malignant neoplasm of larynx NOS (disorder),n,via Query Table +190091005,[X]Malignant neoplasm of respiratory and intrathoracic organs (disorder),n,via Query Table +657371000000107,Malignant neoplasm of epiglottis NOS (disorder),n,via Query Table +534781000000105,Malignant neoplasm of hypopharynx NOS (disorder),n,via Query Table +566541000000107,Malignant neoplasm of other specified site of oropharynx NOS (disorder),n,via Query Table +373627005,Bronchioloalveolar carcinoma (disorder),n,via Query Table +190145000,[X]Secondary malignant neoplasm of other and unspecified respiratory organs (disorder),n,via Query Table +557121000000101,Malignant neoplasm of other specified pleura (disorder),n,via Query Table diff --git a/codelists/opensafely-nhs-england-care-homes-residential-status.csv b/codelists/opensafely-nhs-england-care-homes-residential-status.csv new file mode 100644 index 0000000..0054141 --- /dev/null +++ b/codelists/opensafely-nhs-england-care-homes-residential-status.csv @@ -0,0 +1,3 @@ +code,term +160734000,Lives in a nursing home +394923006,Lives in a residential home diff --git a/codelists/opensafely-structured-medication-review-nhs-england.csv b/codelists/opensafely-structured-medication-review-nhs-england.csv new file mode 100644 index 0000000..c35e336 --- /dev/null +++ b/codelists/opensafely-structured-medication-review-nhs-england.csv @@ -0,0 +1,2 @@ +code,term +1239511000000100,Structured medication review diff --git a/codelists/opensafely-systolic-blood-pressure-qof.csv b/codelists/opensafely-systolic-blood-pressure-qof.csv new file mode 100644 index 0000000..aa4db3d --- /dev/null +++ b/codelists/opensafely-systolic-blood-pressure-qof.csv @@ -0,0 +1,22 @@ +code,term +198081000000101,Ambulatory systolic blood pressure +251070002,Non-invasive systolic arterial pressure +271649006,Systolic blood pressure +314438006,Minimum systolic blood pressure +314439003,Maximum systolic blood pressure +314440001,Average systolic blood pressure +314441002,Minimum day interval systolic blood pressure +314444005,Maximum day interval systolic blood pressure +314445006,Average night interval systolic blood pressure +314446007,Average day interval systolic blood pressure +314447003,Minimum 24 hour systolic blood pressure +314448008,Maximum 24 hour systolic blood pressure +314449000,Average 24 hour systolic blood pressure +314464000,24 hour systolic blood pressure +400974009,Standing systolic blood pressure +407554009,Sitting systolic blood pressure +407556006,Lying systolic blood pressure +413606001,Average home systolic blood pressure +707303003,Post exercise systolic blood pressure response abnormal +716579001,Baseline systolic blood pressure +72313002,Systolic arterial pressure diff --git a/codelists/primis-covid19-vacc-uptake-ast.csv b/codelists/primis-covid19-vacc-uptake-ast.csv new file mode 100644 index 0000000..78f2ddd --- /dev/null +++ b/codelists/primis-covid19-vacc-uptake-ast.csv @@ -0,0 +1,114 @@ +code,term +103781000119103,Allergic bronchopulmonary mycosis +10674711000119105,Acute severe exacerbation of asthma co-occurrent with allergic rhinitis +10674991000119104,Intermittent allergic asthma +10675391000119101,Severe controlled persistent asthma +10675431000119106,Severe persistent allergic asthma +10675471000119109,Acute severe exacerbation of severe persistent allergic asthma +10675551000119104,Acute severe exacerbation of severe persistent asthma co-occurrent with allergic rhinitis +10675751000119107,Severe uncontrolled persistent asthma +10675871000119106,Mild persistent allergic asthma +10675911000119109,Acute severe exacerbation of mild persistent allergic asthma +10675991000119100,Acute severe exacerbation of mild persistent allergic asthma co-occurrent with allergic rhinitis +10676391000119108,Moderate persistent allergic asthma +10676431000119103,Acute severe exacerbation of moderate persistent allergic asthma +10676511000119109,Acute severe exacerbation of moderate persistent asthma co-occurrent with allergic rhinitis +10692681000119108,Aspirin exacerbated respiratory disease +10692721000119102,Chronic obstructive asthma co-occurrent with acute exacerbation of asthma +10692761000119107,Asthma-chronic obstructive pulmonary disease overlap syndrome +10742121000119104,Asthma in mother complicating childbirth +1086701000000102,Life threatening acute exacerbation of allergic asthma +1086711000000100,Life threatening acute exacerbation of intrinsic asthma +1103911000000103,Severe asthma with fungal sensitisation +11641008,Millers' asthma +12428000,Intrinsic asthma without status asthmaticus +124991000119109,Severe persistent asthma co-occurrent with allergic rhinitis +125001000119103,Moderate persistent asthma co-occurrent with allergic rhinitis +125011000119100,Mild persistent asthma co-occurrent with allergic rhinitis +125021000119107,Intermittent asthma co-occurrent with allergic rhinitis +135171000119106,Acute exacerbation of moderate persistent asthma +135181000119109,Acute exacerbation of mild persistent asthma +16584951000119101,Oral steroid-dependent asthma +1741000119102,Intermittent asthma uncontrolled +1751000119100,Acute exacerbation of chronic obstructive airways disease with asthma +18041002,Printers' asthma +195949008,Chronic asthmatic bronchitis +195967001,Asthma +195977004,Mixed asthma +19849005,Meat-wrappers' asthma +225057002,Brittle asthma +233678006,Childhood asthma +233679003,Late onset asthma +233683003,Hay fever with asthma +233687002,Colophony asthma +233688007,Sulfite-induced asthma +2360001000004109,Steroid dependent asthma +266361008,Non-allergic asthma +281239006,Exacerbation of asthma +304527002,Acute asthma +31387002,Exercise-induced asthma +34015007,Bakers' asthma +370218001,Mild asthma +370219009,Moderate asthma +370220003,Occasional asthma +370221004,Severe asthma +37981002,Allergic bronchopulmonary aspergillosis +389145006,Allergic asthma +401000119107,Asthma with irreversible airway obstruction +404804003,Platinum asthma +404806001,Cheese-makers' asthma +404808000,Isocyanate induced asthma +405944004,Asthmatic bronchitis +407674008,Aspirin-induced asthma +409663006,Cough variant asthma +41553006,Detergent asthma +418395004,Tea-makers' asthma +423889005,Non-immunoglobulin E mediated allergic asthma +424199006,Substance induced asthma +424643009,Immunoglobulin E-mediated allergic asthma +425969006,Exacerbation of intermittent asthma +426656000,Severe persistent asthma +426979002,Mild persistent asthma +427295004,Moderate persistent asthma +427603009,Intermittent asthma +427679007,Mild intermittent asthma +442025000,Acute exacerbation of chronic asthmatic bronchitis +445427006,Seasonal asthma +55570000,Asthma without status asthmaticus +56968009,Asthma caused by wood dust +57607007,Occupational asthma +59786004,Weavers' cough +63088003,Allergic asthma without status asthmaticus +703953004,Allergic asthma caused by Dermatophagoides pteronyssinus +703954005,Allergic asthma caused by Dermatophagoides farinae +707444001,Uncomplicated asthma +707445000,Exacerbation of mild persistent asthma +707446004,Exacerbation of moderate persistent asthma +707447008,Exacerbation of severe persistent asthma +707511009,Uncomplicated mild persistent asthma +707512002,Uncomplicated moderate persistent asthma +707513007,Uncomplicated severe persistent asthma +707979007,Acute severe exacerbation of severe persistent asthma +707980005,Acute severe exacerbation of moderate persistent asthma +707981009,Acute severe exacerbation of mild persistent asthma +708038006,Acute exacerbation of asthma +708090002,Acute severe exacerbation of asthma +708093000,Acute exacerbation of immunoglobulin E-mediated allergic asthma +708094006,Acute exacerbation of intrinsic asthma +708095007,Acute severe exacerbation of immunoglobin E-mediated allergic asthma +708096008,Acute severe exacerbation of intrinsic asthma +72301000119103,Asthma in pregnancy +733858005,Acute severe refractory exacerbation of asthma +734904007,Life threatening acute exacerbation of asthma +734905008,Moderate acute exacerbation of asthma +735588005,Uncomplicated allergic asthma +735589002,Uncomplicated non-allergic asthma +762521001,Exacerbation of allergic asthma +782513000,Acute severe exacerbation of allergic asthma +782520007,Exacerbation of allergic asthma due to infection +786836003,Near fatal asthma +829976001,Thunderstorm asthma +866881000000101,Chronic asthma with fixed airflow obstruction +92807009,Chemical-induced asthma +93432008,Drug-induced asthma +99031000119107,Acute exacerbation of asthma co-occurrent with allergic rhinitis diff --git a/codelists/primis-covid19-vacc-uptake-chd_cov.csv b/codelists/primis-covid19-vacc-uptake-chd_cov.csv new file mode 100644 index 0000000..61e5ba4 --- /dev/null +++ b/codelists/primis-covid19-vacc-uptake-chd_cov.csv @@ -0,0 +1,1973 @@ +code,term +1001000119102,Pulmonary embolism with pulmonary infarction +100751000119101,Venous thrombosis due to central venous access device +10190003,Aortocoronary bypass of four or more coronary arteries +103011000119106,Coronary arteriosclerosis in patient with history of previous myocardial infarction +10326007,"Coronary artery bypass with autogenous graft, three grafts" +10451007,Double aortic arch +1051801000000108,Replacement of single chamber intravenous cardiac pacemaker system +1051811000000105,Replacement of dual chamber intravenous cardiac pacemaker system +1051821000000104,Replacement of biventricular intravenous cardiac pacemaker system +1051831000000102,Replacement of single chamber cardiac pacemaker system +1051841000000106,Replacement of biventricular cardiac pacemaker +1051851000000109,Replacement of dual chamber cardiac pacemaker system +105981003,Disorder of cardiac function +10749961000119104,Occlusion of aortoiliac artery +10750641000119101,Cardiac arrest due to failed attempted abortion +10759191000119106,Postpartum septic thrombophlebitis +10759311000119104,Pulmonary embolism in childbirth +10760181000119109,Cardiac arrest due to miscarriage +10811961000119109,Cardiac arrest due to incomplete miscarriage +10818008,Congenital malposition of heart +108411000119109,Mural thrombus of left atrium +10930001,Congenital atresia of pulmonary artery +10964002,Progressive pulmonary hypertension +11029002,Pulmonary apoplexy +11101003,Percutaneous transluminal coronary angioplasty +111289009,Arteriovenous fistula of pulmonary vessels +111293003,Venous thrombosis +111296006,Basilar artery embolism +111319002,"Truncus arteriosus, Edwards' type IV" +111321007,Right aortic arch +111322000,Congenital anomaly of pulmonary veins +111323005,Total anomalous pulmonary venous return +111458008,Postpartum venous thrombosis +111497000,Arterial thrombosis of spinal cord +11399002,Pulmonary hypertensive arterial disease +11614003,Congenital stenosis of pulmonary veins +116291000119103,Occlusion of renal artery due to embolism +11851006,Mitral valve disorder +119564002,Internal mammary-coronary artery bypass graft +119565001,"Coronary artery bypass graft, anastomosis of artery of thorax to coronary artery" +119772003,Coronary artery closure +119773008,Coronary artery reconstruction +120041000119109,Atrial fibrillation with rapid ventricular response +12075007,Congenital hypoplasia of ascending aorta +120871000119108,Systolic heart failure stage B +120901000119108,Diastolic heart failure stage B +12232008,Syphilitic aneurysm of aorta +12236991000119103,Pain at rest of bilateral lower limbs co-occurrent and due to atherosclerosis +12237111000119107,Pain at rest of left lower limb co-occurrent and due to atherosclerosis +12237231000119107,Pain at rest of right lower limb co-occurrent and due to atherosclerosis +12237791000119102,Acute thrombosis of superficial vein of bilateral upper limbs +12237831000119108,Acute thrombosis of superficial vein of left upper limb +12237871000119106,Acute thrombosis of superficial vein of right upper limb +123659003,Congenital malrotation of heart +123660008,Dextrorotation of heart +125963005,Patent ductus arteriosus with left-to-right shunt +125964004,Patent ductus arteriosus with right-to-left shunt +126037009,Traumatic rupture of aorta +127014009,Peripheral angiopathy due to diabetes mellitus +12770006,Cyanotic congenital heart disease +1279006,Repair of cardiac pacemaker pocket in skin AND/OR subcutaneous tissue +128053003,Deep venous thrombosis +128054009,Deep venous thrombosis of upper extremity +128055005,Deep venous thrombosis of pelvic vein +128238001,Chronic heart disease +128404006,Right heart failure +128551005,Aortic fistula +128566008,Congenital pulmonary vein confluence +128584005,Congenital pulmonary artery conduit +12951009,"Implantation of electrode into cardiac atrium, replacement" +132091000119104,Chronic deep venous thrombosis of lower limb due to coronary artery bypass grafting +132111000119107,Acute deep venous thrombosis of lower limb due to coronary artery bypass grafting +13213009,Congenital heart disease +132131000119102,Chronic deep venous thrombosis of calf +132141000119106,Chronic deep venous thrombosis of lower extremity +132151000119108,Chronic deep venous thrombosis of popliteal vein +132161000119105,Chronic deep venous thrombosis of tibial vein +132171000119104,Chronic deep venous thrombosis of thigh +132191000119103,Chronic deep venous thrombosis of femoral vein +132201000119100,Chronic deep venous thrombosis of iliofemoral vein +132221000119109,Chronic deep venous thrombosis of upper extremity +132241000119103,Acute deep venous thrombosis of calf +132251000119101,Acute deep venous thrombosis of popliteal vein +132261000119104,Acute deep venous thrombosis of tibial vein +132271000119105,Acute deep venous thrombosis of thigh +132281000119108,Acute deep venous thrombosis +132291000119106,Acute deep venous thrombosis of femoral vein +132301000119107,Acute deep venous thrombosis of iliofemoral vein +132321000119103,Acute deep venous thrombosis of upper extremity +132531000119105,Chronic thrombosis of superficial vein of upper extremity +132551000119104,Chronic thrombosis of subclavian vein +132591000119109,Acute thrombosis of superficial vein of upper extremity +132601000119102,Acute deep venous thrombosis of pelvic vein +132611000119104,Acute thrombosis of subclavian vein +133411000119108,Chronic thrombosis of mesenteric vein +133421000119101,Acute thrombosis of mesenteric vein +133971000119108,Chronic pulmonary embolism +134399007,Deep vein thrombosis of leg related to air travel +134961000119104,Acute deep venous thrombosis of axillary vein +135001000119100,Acute deep venous thrombosis of internal jugular vein +135011000119102,Chronic deep venous thrombosis of internal jugular vein +135061000119104,Chronic thrombosis of superior vena cava +135071000119105,Acute thrombosis of superior vena cava +136751000119108,Chronic deep venous thrombosis of upper extremity as complication of procedure +136771000119104,Acute deep venous thrombosis of upper extremity as complication of procedure +136781000119101,Acute deep venous thrombosis of lower extremity as complication of procedure +13730001000004107,Thrombosis of vein of upper limb +13756000,Check artificial pacemaker for electrode impedance +13867009,Preductal coarctation of aorta +13957003,Aortocaval fistula +13963007,Repair of coronary arteriovenous chamber fistula +14201006,Coronary angioplasty by open chest approach +142111000119108,Ectasia of thoracic aorta +142121000119101,Abdominal aortic ectasia +14323007,Aortocoronary bypass of three coronary arteries +14336007,Ruptured abdominal aortic aneurysm +143551000119106,Chronic thrombosis of splenic vein +143561000119108,Acute thrombosis of splenic vein +14534009,Splenic vein thrombosis +14886009,Abdominal heart +14977000,Multiple AND bilateral precerebral artery thrombosis +15191001,Origin of innominate artery from left side of aortic arch +15386007,Stricture of pulmonary vessel +153911000119104,Peripheral arterial insufficiency +15459006,Endocardial cushion defect +15648601000119102,Atherosclerosis of artery of right upper limb +15648691000119108,Atherosclerosis of artery of left upper limb +15648731000119101,Atherosclerosis of right renal artery +15648771000119103,Atherosclerosis of bilateral renal arteries +15648821000119105,Atherosclerosis of left renal artery +15649941000119102,Gangrene of bilateral lower limbs co-occurrent and due to atherosclerosis +15708201000119101,Acute deep vein thrombosis of right upper limb following procedure +15708401000119100,Acute deep vein thrombosis of left upper limb following procedure +15711241000119106,Acute deep vein thrombosis of right lower limb following procedure +15711401000119105,Acute deep vein thrombosis of left lower limb following procedure +15712161000119106,Acute thrombosis of inferior vena cava +15712441000119103,Chronic thrombosis of inferior vena cava +15712641000119101,Ischemia of right upper limb +15723004,Electronic analysis of internal pacemaker system +15742000,Thrombosis of inferior sagittal sinus +15760351000119105,Chronic deep venous thrombosis +15842009,Thrombosis of renal vein +15960021000119107,Dilatation of aortic root co-occurrent and due to Marfan syndrome +15960541000119107,Unstable angina due to arteriosclerosis of autologous vein coronary artery bypass graft +15964901000119107,Atypical atrial flutter +15964981000119104,Congenital anomaly of cardiac chamber +15967301000119102,Stenosis of bilateral subclavian arteries +15967341000119100,Stenosis of right subclavian artery +15972461000119101,Thrombosis of left iliac artery +15972501000119101,Thrombosis of right iliac artery +15972541000119104,Thrombosis of bilateral iliac arteries +15972701000119106,Thrombosis of splenic artery +15978431000119106,Thrombosis of right vertebral artery +15978471000119109,Thrombosis of left vertebral artery +16002551000119103,Pain of left upper limb co-occurrent and due to ischemia +16002711000119105,Pain of right upper limb co-occurrent and due to ischemia +16005391000119108,Occlusion of distal artery of right upper limb +16005471000119100,Occlusion of distal artery of left upper limb +16006031000119103,Thrombophlebitis of vein of right upper limb +16006071000119100,Thrombophlebitis of vein of left upper limb +16006111000119107,Thrombophlebitis of superficial vein of bilateral upper limbs +16006151000119108,Thrombophlebitis of superficial vein of right upper limb +16006191000119103,Thrombophlebitis of superficial vein of left upper limb +16006351000119106,Thrombophlebitis of vein of bilateral upper limbs +16007751000119109,Thrombosis of artery of right upper extremity +16007871000119108,Thrombosis of artery of left upper extremity +16009271000119101,Embolism of artery of right upper limb +16009431000119100,Embolism of artery of left upper limb +16011391000119108,Stenosis of artery of left lower limb +16011431000119103,Stenosis of artery of right lower limb +16011751000119102,Thrombophlebitis of left saphenous vein +16011791000119107,Thrombophlebitis of right saphenous vein +16012511000119101,Embolism of artery of left lower limb +16012551000119100,Embolism of artery of right lower limb +16012591000119105,Embolism of left popliteal artery +16012671000119108,Embolism of right popliteal artery +16012711000119107,Atheroembolism of bilateral lower limbs +16012791000119103,Thrombosis of artery of right lower extremity +16012831000119109,Thrombosis of artery of left lower extremity +16012911000119105,Thrombosis of left popliteal artery +16012951000119106,Thrombosis of right popliteal artery +16012991000119101,Thrombosis of left femoral artery +16013031000119107,Thrombosis of right femoral artery +16013111000119103,Thrombosis of right common femoral artery +16013151000119102,Thrombosis of left common femoral artery +16014311000119102,Thrombophlebitis of vein of bilateral lower limbs +16014471000119103,Thrombophlebitis of vein of right lower limb +16014511000119107,Thrombophlebitis of superficial vein of right lower limb +16014551000119108,Thrombophlebitis of superficial vein of left lower limb +16014591000119103,Thrombophlebitis of superficial vein of bilateral lower limbs +16014631000119103,Thrombophlebitis of vein of left lower limb +16014671000119100,Occlusion of left femoral artery +16014711000119101,Occlusion of right popliteal artery +16014791000119105,Occlusion of left popliteal artery +16014871000119101,Occlusion of right femoral artery +16018831000119106,Atherosclerosis of bilateral iliac arteries +16018911000119107,Atherosclerosis of non-biological bypass graft of bilateral lower limbs +16019471000119104,Atherosclerosis of left iliac artery +16019511000119108,Atherosclerosis of right iliac artery +16025551000119102,Thrombophlebitis of left jugular vein +16025591000119107,Thrombophlebitis of right jugular vein +16026391000119106,Thrombosis of aorta +16026431000119101,Chronic venous thrombosis +161502000,History of myocardial infarct at age less than sixty +161503005,History of myocardial infarct at age greater than sixty +161666008,History of heart recipient +162710004,On examination - collapse -cardiac arrest +16567006,Mesocardia +16573007,Senile cardiac amyloidosis +16574001,Cardiac arrest after obstetrical surgery AND/OR other procedure including delivery +16624001000119104,Intramural hematoma of aorta +16624051000119100,Intramural hematoma of thoracic aorta +16624151000119101,Intramural hematoma of abdominal aorta +16750002,Deep thrombophlebitis +16780001000004106,Abscess of aorta +16781006,Removal of cardiac pacemaker from epicardium with replacement of atrial and/or ventricular leads +16899261000119106,Atherosclerosis of superior mesenteric artery +16972009,Congenital aneurysm of aorta +17024001,Aortopulmonary window +17073005,Aortocoronary artery bypass graft with vein graft +17355002,Aorto-esophageal fistula +1748006,Thrombophlebitis of deep femoral vein +174802006,Allotransplant of heart and lung +174803001,Revision of transplantation of heart and lung +174808005,Xenotransplant of heart +174809002,Heterotopic allotransplant of heart +174810007,Revision of implantation of prosthetic heart +175021005,Allograft bypass of coronary artery +175029007,Prosthetic bypass of coronary artery +175045009,Connection of mammary artery to coronary artery +175047001,Double implantation of mammary arteries into coronary arteries +175048006,Single anastomosis of mammary artery to left anterior descending coronary artery +175050003,Single implantation of mammary artery into coronary artery +175066001,Percutaneous transluminal balloon angioplasty of bypass graft of coronary artery +175137001,Resiting of lead of intravenous pacemaker system +175138006,Maintenance of battery of intravenous cardiac pacemaker system +175140001,Complete removal of implanted cardiac pacemaker system +175142009,Implantation of permanent intravenous cardiac pacemaker +175221003,Construction of central aortopulmonary interposition shunt +175223000,Creation of shunt from ascending aorta to right pulmonary artery using interposition tube prosthesis +175224006,Creation of shunt from ascending aorta to left pulmonary artery using interposition tube prosthesis +175228009,Construction of aortopulmonary window +17920008,Portal vein thrombosis +17954009,Replacement of transvenous atrial pacemaker electrode leads +179924009,Cardiac arrest in fetus OR newborn +17993000,Pulmonary arteritis +18000001000004101,Stenosis of left subclavian artery +180906006,Neonatal cardiac arrest +181869007,Neonatal cardiorespiratory arrest +18322005,Thrombosis of torcular Herophili +18590009,Cardiac pacing +186893003,Rupture of syphilitic cerebral aneurysm +1871002,Repair of aneurysm of coronary artery +18723003,Demand pacing +18919000,Transplantation of coronary artery +19057007,Status anginosus +19242006,Pulmonary edema +192753009,Phlebitis and thrombophlebitis of intracranial sinuses +192759008,Cerebral venous sinus thrombosis +192760003,Thrombosis of superior longitudinal sinus +192761004,Thrombosis transverse sinus +192770001,Thrombophlebitis of cavernous sinus +192771002,Thrombophlebitis of superior longitudinal venous sinus +192772009,Thrombophlebitis lateral venous sinus +194823009,Acute coronary insufficiency +194828000,Angina +194862000,Hemopericardium due to and following acute myocardial infarction +194865003,Rupture of cardiac wall without hemopericardium as current complication following acute myocardial infarction +194883006,Postoperative pulmonary embolus +194892009,Pulmonary artery aneurysm +195002007,Multiple valve disease +195080001,Atrial fibrillation and flutter +195126007,Atrial hypertrophy +195137008,Acquired cardiac septal defect +195229008,Non-pyogenic venous sinus thrombosis +195258006,Thoracic aortic aneurysm which has ruptured +195265003,"Thoracoabdominal aortic aneurysm, ruptured" +195268001,Leaking abdominal aortic aneurysm +195394007,Phlebitis and thrombophlebitis +195396009,Superficial thrombophlebitis of long saphenous vein +195397000,Superficial thrombophlebitis of short saphenous vein +195410000,Thrombophlebitis of the femoral vein +195411001,Thrombophlebitis of the popliteal vein +195412008,Thrombophlebitis of the anterior tibial vein +195414009,Thrombophlebitis of the posterior tibial vein +195425000,Thrombophlebitis of the common iliac vein +195426004,Thrombophlebitis of the internal iliac vein +195427008,Thrombophlebitis of the external iliac vein +195437003,Embolism and thrombosis of the vena cava +195438008,Embolism and thrombosis of the renal vein +196999001,Superior mesenteric artery embolus +197000003,Superior mesenteric artery thrombosis +197001004,Superior mesenteric vein thrombosis +200232006,Antenatal deep vein thrombosis - delivered +200233001,Antenatal deep vein thrombosis with antenatal complication +200237000,Postnatal deep vein thrombosis - delivered with postnatal complication +200238005,Postnatal deep vein thrombosis with postnatal complication +200258006,Obstetric cerebral venous thrombosis +200259003,Cerebral venous thrombosis in pregnancy +200260008,Cerebral venous thrombosis in the puerperium +200284000,Obstetric pulmonary embolism +200308001,Obstetric pyemic and septic pulmonary embolism - delivered +200310004,Obstetric pyemic and septic pulmonary embolism with antenatal complication +200311000,Obstetric pyemic and septic pulmonary embolism with postnatal complication +204296002,Discordant ventriculoarterial connection +204297006,Total great vessel transposition +204299009,Dextrotransposition of aorta +204300001,Incomplete great vessel transposition +204311009,Eisenmenger's complex +204395001,Congenital aneurysm of heart +204397009,Cor triloculare +204398004,Congenital epicardial cyst +204399007,Hemicardia +204423002,Anomalous origin of the aortic arch +204427001,Persistent aortic arch convolutions +204431007,Atresia and stenosis of aorta +204433005,Aplasia of aorta +204443008,Pulmonary artery atresia +204451006,Anomalies of great veins +204456001,Subdiaphragmatic total anomalous pulmonary venous return +204457005,Supradiaphragmatic total anomalous pulmonary venous return +204463001,Absence of inferior vena cava +204464007,Absence of superior vena cava +204467000,Pulmonary vein atresia +20453006,Relocation of cardiac pacemaker pocket to new site in subcutaneous tissue +20721001,Tricuspid valve disorder +20735004,Syphilitic aortitis +20852007,Romano-Ward syndrome +21234008,Congenital stenosis of aorta +21258007,Thrombosis of lateral venous sinus +213037002,Mechanical complication of coronary bypass +213046008,Mechanical complication of intra-aortic balloon +213220000,Postoperative deep vein thrombosis +213310008,Thrombophlebitis after infusion +21379009,Ruptured sinus of Valsalva +21470009,Syncope anginosa +21631000119105,Limb ischemia +218728005,Interrupted aortic arch +2213002,Congenital anomaly of vena cava +2250001,Resection of ascending aorta with anastomosis +225566008,Ischemic chest pain +22750001,Anomalous pulmonary venous drainage to abdominal portion of inferior vena cava +228630004,Repositioning of permanent transvenous electrodes +22870004,Repair of sinus of Valsalva fistula with cardiopulmonary bypass +229577006,Replacement of permanent transvenous electrodes +230221005,Intracranial arterial septic embolism +230222003,Septic thrombophlebitis of straight sinus +230223008,Septic thrombophlebitis of sigmoid sinus +230224002,Septic thrombophlebitis of cortical vein +230225001,Septic thrombophlebitis of great cerebral vein +230361000000100,Pacemaker testing +230588002,Reposition of cardiac pacemaker pocket +230720005,Cerebral venous thrombosis of straight sinus +230721009,Cerebral venous thrombosis of sigmoid sinus +230722002,Cerebral venous thrombosis of cortical vein +230723007,Cerebral venous thrombosis of great cerebral vein +230735006,Syphilitic cerebral arteritis +230740003,Anterior spinal artery thrombosis +231847000,Orbital thrombophlebitis +232038007,Central retinal vein occlusion with neovascularization +232039004,Central retinal vein occlusion with macular edema +232040002,Central retinal vein occlusion - juvenile +232041003,Central retinal vein occlusion - juvenile with neovascularization +232042005,Central retinal vein occlusion - juvenile with macular edema +232043000,Hemispheric retinal vein occlusion +232044006,Hemispheric retinal vein occlusion with neovascularization +232045007,Hemispheric retinal vein occlusion with macular edema +232046008,Branch retinal vein occlusion with neovascularization +232048009,Branch retinal vein occlusion with macular edema +232334003,Replacement of battery of intravenous cardiac pacemaker system +232717009,Coronary artery bypass grafting +232719007,Coronary artery bypass graft x 1 +232720001,Coronary artery bypass grafts x 2 +232721002,Coronary artery bypass grafts x 3 +232722009,Coronary artery bypass grafts x 4 +232723004,Coronary artery bypass grafts x 5 +232724005,Coronary artery bypass grafts greater than 5 +232849000,Aortic valve replacement and plication of ascending aorta +232973007,Allotransplant of heart +232974001,Orthotopic allotransplant of heart +232981000000109,Implantation of single chamber cardiac pacemaker system +232991000000106,Implantation of dual chamber cardiac pacemaker system +233096003,Construction of conduit - left ventricle to ascending aorta +233124005,Construction of intraventricular left ventricle to aorta tunnel +233125006,Construction of intraventricular left ventricle to aorta spiral tunnel +233174007,Cardiac pacemaker procedure +233175008,Temporary cardiac pacemaker procedure +233176009,Direct temporary cardiac pacemaker procedure +233177000,Insertion of epicardial electrode for temporary cardiac pacing +233178005,Insertion of endocardial electrode for temporary cardiac pacing +233179002,Indirect temporary cardiac pacemaker procedure +233180004,Transesophageal cardiac pacing procedure +233181000,Transthoracic cardiac pacing procedure +233182007,Permanent cardiac pacemaker procedure +233183002,Insertion of permanent epicardial cardiac pacemaker system +233184008,Maintenance procedure for cardiac pacemaker system +233185009,Reprogramming of cardiac pacemaker +233187001,Removal of implanted cardiac pacemaker system or components +233188006,Removal of cardiac pacing electrode +233224003,Central aortopulmonary shunt operation +233225002,Disconnection of pulmonary trunk and reanastomosis of distal end to ascending aorta +23325006,Repair of cardiac pacemaker +233815004,Persistent pulmonary hypertension of the newborn +233821000,New onset angina +233847009,Cardiac rupture due to and following acute myocardial infarction +233848004,Disorder of endocardium and heart valve +233885007,Post-infarction pericarditis +233886008,Chronic infective pericarditis +233887004,Chronic pericardial effusion caused by cholesterol +233889001,Post-infarction hemopericardium +233910005,Lone atrial fibrillation +233911009,Non-rheumatic atrial fibrillation +233927002,Cardiac arrest with successful resuscitation +233928007,Myocardial dysfunction +233929004,Post-infarction mural thrombus +233930009,Intracardiac thrombosis in low output state +233936003,Acute massive pulmonary embolism +233937007,Subacute massive pulmonary embolism +233940007,Pulmonary tumor embolism +233941006,Solitary pulmonary hypertension +233942004,Small vessel pulmonary hypertension +233943009,Sporadic primary pulmonary hypertension +233944003,Familial primary pulmonary hypertension +233945002,Pulmonary hypertension caused by drug +233946001,Large vessel pulmonary hypertension +233948000,Post-arteritic pulmonary hypertension +233949008,Pulmonary capillary hemangiomatosis +233950008,Pulmonary hypertension associated with chronic underventilation +233954004,High altitude pulmonary hypertension +233955003,Abdominal aortic atherosclerosis +233958001,Peripheral ischemia +233959009,Upper limb ischemia +233960004,Critical upper limb ischemia +233961000,Lower limb ischemia +233962007,Critical lower limb ischemia +233965009,Stenosis of thoracic aorta +233966005,Stenosis of abdominal aorta +233967001,Common iliac artery stenosis +233968006,External iliac artery stenosis +233969003,Superficial femoral artery stenosis +233970002,Coronary artery stenosis +233972005,Aortic bifurcation embolus +233973000,Femoral artery embolus +233974006,Brachial artery embolus +233976008,Aortic bifurcation thrombosis +233984007,Thoracoabdominal aortic aneurysm +233985008,Abdominal aortic aneurysm +233994002,Dissection of thoracic aorta +233995001,Type I dissection of thoracic aorta +233996000,Type II dissection of thoracic aorta +233997009,Dissection of distal aorta +234011001,Thoracic aorta perforation +234036007,Superficial thrombophlebitis of cephalic vein +234037003,Superficial thrombophlebitis of basilic vein +234040003,Saphenous vein thrombophlebitis +234041004,Inferior mesenteric vein thrombosis +234043001,Thrombosis of vein of lower leg +234044007,Iliofemoral deep vein thrombosis +234045008,Thrombosis of transplanted vein +234046009,Transplant renal vein thrombosis +234047000,Radiation thrombophlebitis +234048005,Recurrent idiopathic thrombophlebitis +234062003,Pulmonary vein stenosis +234065001,Superior vena cava stenosis +234132006,Congenital abnormality of great veins and coronary sinus +234161007,Familial pulmonary capillary hemangiomatosis +234172002,Electromechanical dissociation +234240008,Intra-aortic balloon rupture +234241007,Intra-aortic balloon infection +234242000,Intra-aortic balloon thrombosis +234243005,Inadequate aortic balloon augmentation +235842000,Occlusive mesenteric ischemia +23627006,Chronic pericarditis +236488005,Renal artery occlusion +236489002,Cholesterol embolus syndrome +236721000000106,Implantation of intravenous dual chamber cardiac pacemaker system +23685000,Rheumatic heart disease +237226002,Heart disease during pregnancy +237771000000107,Distant pacemaker test +239297008,Lymphomatoid granulomatosis of lung +239937004,Idiopathic aortitis +239948006,Secondary aortitis +23999003,Implantation of rate-responsive cardiac single-chamber device +240567009,Syphilitic coronary artery disease +241041000000108,Temporary transvenous pacing +241051000000106,Transvenous pacemaker sensitivity measurement +243286001,Acute mesenteric arterial occlusion +243410003,Thrombosis of mesenteric artery +24395005,Check artificial pacemaker for waveform artifact +24596005,Venous retinal branch occlusion +2477008,Superficial thrombophlebitis +24805007,Portal thrombophlebitis +250996007,Complex mitral valve orifice +251036003,Aortic root dilatation +251038002,Aortic root congenital abnormality +251042004,Peripheral pulmonary artery disease +251045002,Peripheral pulmonary artery A/V aneurysm +251046001,Multiple peripheral pulmonary artery stenoses +251047005,Dilatation of pulmonary artery +25263003,Grafting of heart for revascularization +25267002,Insertion of intracardiac pacemaker +253264007,"Congenital heart disease, septal and bulbar anomalies" +253267000,Congenital abnormality of relationship of cardiac component +253269002,Criss-cross heart +253270001,Abnormal relationship of aortic orifice to pulmonary orifice +253271002,Mirror-imaged heart +253272009,Congenital abnormality of cardiac connection +253273004,Cardiac septal defects +253274005,Abnormal atrioventricular connection +253275006,Abnormal atrioventricular connection - biventricular +253277003,Discordant atrioventricular connection +253278008,Ambiguous atrioventricular connection +253279000,Absent atrioventricular connection with straddling valve +253280002,Abnormal atrioventricular connection - univentricular +253285007,Absent right sided atrioventricular connection +253287004,Left sided atrium connecting to right ventricle +253288009,Left sided atrium connecting to both ventricles +253289001,Left sided atrium connecting to ventricle of indeterminate morphology +253290005,Absent left sided atrioventricular connection +253293007,Right sided atrium connecting to both ventricles +253294001,Right sided atrium connecting to ventricle of indeterminate morphology +253295000,Abnormal ventriculoarterial connection +253297008,Transposition of aorta +253302006,Single outlet ventriculoarterial connection +253304007,Solitary pulmonary trunk with aortic atresia +253305008,Solitary arterial trunk +253306009,Abnormality of right superior vena cava +253307000,Atretic right superior vena cava +253308005,Absent right superior vena cava +253309002,Saccular dilatation of right superior vena cava +253310007,Anomalous insertion of right superior vena cava to left atrium +253311006,Bilateral superior vena cava +253312004,Absent bridging vein +253313009,Inferior vena cava interruption with left sided hemiazygos continuation +253314003,Inferior vena cava interruption with right sided azygos continuation +253315002,Inferior vena cava interruption with bilateral azygos continuation +253316001,Abnormal inferior vena caval connection +253317005,Inferior vena cava connecting to morphological left atrium +253318000,Inferior vena cava connecting to coronary sinus +253319008,Inferior vena cava to left of spine +253320002,Inferior cava to left of spine with right descending aorta +253321003,Anomalous termination of right pulmonary vein +253322005,Obstructed pulmonary venous connection +253324006,Coronary sinus defect in left atrium +253327004,Congenital coronary sinus stenosis +253334002,Congenital abnormality of atria and atrial septum +253337009,Isomerism of left atrial appendage +253339007,Right atrial abnormality +253353007,Divided left atrium +253354001,Supramitral left atrial ring +253356004,Left atrial appendage absent +253357008,Left atrial appendage - right - juxtaposition +253358003,Left atrial appendage aneurysm +253359006,Left atrial endocardial fibroelastosis +253360001,Left atrial hypoplasia +253361002,Left atrial dilatation +253362009,Giant left atrium +253364005,Foramen ovale valvar aneurysm +2534005,Congenital absence of vena cava +253438003,Common atrioventricular valve prolapse +253579004,Truncal valve abnormality +253614008,Tubular hypoplasia of aorta +253615009,Anomalies of the aorta excluding coarction +253620009,Pulmonary trunk abnormality +253621008,Pulmonary trunk stenosis +253622001,Pulmonary trunk hypoplasia +253623006,Pulmonary trunk atresia +253627007,Pulmonary trunk absent with confluent pulmonary arteries +253628002,Pulmonary trunk absent with non-confluent pulmonary arteries +253629005,Pulmonary trunk absent with absent pulmonary artery +253630000,Pulmonary trunk dilatation +253631001,Peripheral pulmonary artery stenosis +253632008,Abnormal origin of right pulmonary artery +253633003,Anomalous origin of right pulmonary artery from ductus arteriosus +253634009,Anomalous origin of right pulmonary artery from ascending aorta +253635005,Abnormal origin of left pulmonary artery +253636006,Anomalous origin of left pulmonary artery from ductus arteriosus +253637002,Anomalous origin of left pulmonary artery from ascending aorta +253638007,Anomalous origin of left pulmonary artery from right pulmonary artery +253640002,Ascending aorta abnormality +253641003,Localized supravalvar aortic stenosis +253642005,Diffuse supravalvar aortic stenosis +253643000,Ascending aortic atresia +253644006,Ascending aorta absent +253645007,Ascending aorta dilatation +253646008,Congenital aneurysm of ascending aorta +253647004,Sinus of Valsalva abnormality +253648009,Sinus of Valsalva aneurysm with rupture +253649001,Aortic tunnel +253651002,Aortic arch and descending aorta abnormality +253652009,Right descending aorta +253653004,Left aortic arch and right descending aorta +253654005,Right aortic arch and right descending aorta +253655006,Right aortic arch and left descending aorta +253656007,Aortic arch centrally descending +253657003,Cervical aortic arch +253660005,Double aortic arch with both patent +253663007,Vascular ring with left aortic arch +253664001,Vascular ring with right aortic arch +253672004,Preductal aortic stenosis +253673009,Preductal interruption of aorta +253674003,Preductal hypoplasia of aorta +253675002,Juxtaductal aortic coarctation +253676001,Postductal aortic stenosis +253677005,Postductal interruption of aorta +253678000,Thoracic aortic coarctation +253679008,Abdominal aortic coarctation +253680006,Postductal hypoplasia of aorta +253681005,Interrupted aortic arch distal to left subclavian artery +253682003,Interrupted aortic arch between left subclavian and left common carotid artery +253683008,Interrupted aortic arch between left common carotid and brachiocephalic artery +253685001,Patent ductus arteriosus - delayed closure +253690003,Systemic to pulmonary collateral artery +253691004,Stenosis of systemic to pulmonary artery collateral artery +253692006,Bronchopulmonary collateral artery +253698005,Isolation of brachiocephalic trunk +253732001,Totally absent pericardium +25559009,Congenital absence of left pulmonary artery +257812009,Chronic peri-aortitis +261195002,Circulatory arrest +26146002,Complete transposition of great vessels +261538006,Open intracoronary repair of coronary artery fistula +261756009,Coronary interposition technique +26214006,Thrombosis of retinal artery +262943006,Transection of aorta +264086008,Malaligned outlet septum +265481001,Double anastomosis of mammary arteries to coronary arteries +265482008,Implantation of emergency intravenous cardiac pacemaker +266267005,Deep vein phlebitis and thrombophlebitis of the leg +26660001,Dilatation of aorta +266810008,Replacement of IV endocardial electrode +267284008,Obstetric pyemic and septic pulmonary embolism +26780008,Coarctation of pulmonary artery +268174004,Bulbus cordis and cardiac septal closure anomalies +268180007,Right hypoplastic heart syndrome +268184003,Hypoplasia of aorta +268185002,Supravalvar aortic stenosis +268187005,Congenital pulmonary artery aneurysm +26865008,Congenital absence of superior vena cava +26954004,Thrombophlebitis of superior sagittal sinus +27017003,Chronic effusive pericarditis +270512000,Pulmonary arteriovenous aneurysm +271432005,Congenital renal artery stenosis +271573009,Congenital abnormality of thoracic aorta and pulmonary arteries +271984008,Disorder of prosthetic cardiac valve +271985009,Disorder of intra-aortic pulsation balloon +27277001,Tophus of heart co-occurrent and due to gout +274096000,Pulmonary heart disease +274097009,Non-rheumatic heart valve disorder +274098004,Rupture of chordae tendineae +27443008,Removal of transvenous electrodes +275215001,Left internal mammary artery single anastomosis +275216000,Right internal mammary artery single anastomosis +275217009,Ligation of sinus of Valsalva fistula +275252001,Left internal mammary artery sequential anastomosis +275253006,Right internal mammary artery sequential anastomosis +275514001,Impaired left ventricular function +275516004,Cardiomegaly - hypertensive +275517008,Superficial vein thrombosis +275905002,History of myocardial problem +276308001,General maintenance of cardiac pacemaker +27631000146108,Dissection of aortic arch +27637000,Dextrocardia +276500007,Mesenteric embolus +27651000146102,Dissection of descending aorta +276637009,Hemorrhagic pulmonary edema +276792008,Pulmonary hypertension with extreme obesity +276793003,Pulmonary hypertension with occult mitral stenosis +276794009,Facultative pulmonary hypertension with shunt at atrial level +277192005,Coronary artery graft placement +27944006,Removal of electronic heart device pulse generator +27986000,Congenital pulmonary arteriovenous aneurysm +280966008,Phlegmasia alba dolens - obstetric +281170005,Arrhythmogenic right ventricular cardiomyopathy +281556002,Insertion of temporary cardiac pacemaker +281595001,Thrombosis of inferior vena cava +281596000,Thrombosis of superior vena cava +281597009,Brachiocephalic vein thrombosis +28256002,"Electronic wave or pacemaker analysis, remote" +282664001,Renal artery stenosis of unknown cause +2831000119107,Aneurysm of descending thoracic aorta +285251000119101,Dextrotransposition of the great arteries +285381000119104,Acute deep vein thrombosis of bilateral femoral veins +285721000119104,History of acute ST segment elevation myocardial infarction +285781000119100,Infection of cardiac graft +286071000119109,Congenital peripheral pulmonary artery stenosis +286331000119109,Total anomalous pulmonary venous connection to coronary sinus +286341000119100,Total anomalous pulmonary venous connection to hepatic vein +286351000119103,Total anomalous pulmonary venous connection to right atrium +286361000119101,Total anomalous pulmonary venous connection to superior vena cava +286959000,Peripheral arterial embolism +28714002,Debridement of skin or subcutaneous tissue of pacemaker pocket +287696002,Atrial overdrive pacing +287698001,Fixed-rate cardiac pacemaker +287699009,Emergency cardiac pacemaker +288183004,Insertion of intravenous endocardial electrode +288184005,Removal of IV endocardial electrode +289923007,Acquired renal artery stenosis +293451000119102,Chronic deep vein thrombosis of right iliac vein +293461000119100,Chronic deep vein thrombosis of left iliac vein +293481000119109,Acute deep vein thrombosis of right iliac vein +293491000119107,Acute deep vein thrombosis of left iliac vein +297135003,Subclavian artery embolus +297136002,Axillary artery embolus +297137006,Celiac artery embolus +297138001,Embolus of circle of Willis +297140006,Inferior mesenteric artery embolus +297141005,Popliteal artery embolus +297143008,Suprarenal artery embolus +297146000,Brachial artery thrombosis +297148004,Celiac artery thrombosis +297149007,Common femoral artery thrombosis +297150007,Common iliac artery thrombosis +297151006,External iliac artery thrombosis +297152004,Internal iliac artery thrombosis +297153009,Profunda femoris artery thrombosis +297154003,Subclavian artery thrombosis +297155002,Superficial femoral artery thrombosis +297156001,Axillary vein thrombosis +297157005,Intracranial venous thrombosis +297162006,Crural artery thrombosis +297218007,Congenital abnormality of ductus arteriosus +297911000000108,Electrical capture by temporary transvenous pacing +297921000000102,Mechanical capture by temporary transvenous pacing +29819009,Aortocoronary bypass of one coronary artery +29899005,Coronary artery embolism +29934004,Anomalous pulmonary venous drainage to coronary sinus +300917007,Ischemia of feet +300919005,Digital arterial thrombosis +300921000,Subclavian artery stenosis +300995000,Exercise-induced angina +300996004,Controlled atrial fibrillation +301755001,Ischemic foot +301899003,Dissection of proximal aorta +302131003,Tuberculosis of heart +302233006,Renal artery stenosis +302300004,Femoral popliteal occlusion +302878004,Intracranial septic thrombophlebitis +302879007,Septic thrombophlebitis of cavernous sinus +302880005,Septic thrombophlebitis of sagittal sinus +302881009,Septic thrombophlebitis of lateral sinus +302910002,Atherosclerotic renal artery stenosis +303070000,Pulmonary arteriovenous malformation +30670000,"Anastomosis of thoracic artery to coronary artery, double" +306848006,Occlusion of femoropopliteal bypass graft +306849003,Occlusion of femorofemoral crossover bypass graft +306851004,Occlusion of aortic bifurcation bypass graft +306852006,Occlusion of renal artery bypass graft +306856009,Thrombosis of aortic bifurcation bypass graft +307280005,Implantation of cardiac pacemaker +307403007,Aortojejunal fistula +307404001,Aortocolonic fistula +307406004,Trash foot +307407008,Ischemic hand +307408003,Ischemic toe +307409006,Ischemic finger +307816004,Leriche's syndrome +308065005,History of myocardial infarction in last year +308546005,Dissection of aorta +308805008,Reimplantation of cardiac pacemaker electrode +309405007,Implantation of simple one wire intravenous cardiac pacemaker +309471004,Implantation of temporary intravenous cardiac pacemaker +309735004,Thrombosis of vein of lower limb +309809007,Electromechanical dissociation with successful resuscitation +309814006,Aortocoronary bypass grafting +31019002,Implantation of artificial heart +310415002,Suturing of sinus of Valsalva fistula +310416001,Patching of sinus of Valsalva fistula +31080005,Pericarditis secondary to Mulibrey nanism +31211000119101,Peripheral angiopathy due to type 1 diabetes mellitus +312302004,Plication of ascending aorta +312375001,Upper limb arterial embolus +312377009,Post-radiological embolism of upper limb artery +312378004,Lower limb arterial embolus +312380005,Post-radiological embolism of lower limb artery +312383007,Infective aortitis +312496009,Iliac artery stenosis +312584000,Thrombosis of vein of trunk +312586003,Intracranial thrombophlebitis +312592009,Head and neck arterial embolus +312593004,Trunk arterial embolus +312594005,Head and neck arterial thrombosis +312601003,Thoracic aorta abnormality +31268005,Thrombophlebitis migrans +312822006,Critical ischemia of foot +312825008,Common iliac artery occlusion +312826009,External iliac artery occlusion +312827000,Superficial femoral artery occlusion +312828005,Common femoral artery occlusion +312829002,Common femoral artery stenosis +312997008,Central retinal vein occlusion - ischemic +312998003,Central retinal vein occlusion - non-ischemic +314000002,Branch retinal vein occlusion with no neovascularization +314116003,Post infarct angina +314184006,Ruptured suprarenal aortic aneurysm +314185007,Juxtarenal aortic aneurysm +314186008,Inflammatory abdominal aortic aneurysm +314187004,Iliac artery occlusion +314188009,Femoral artery occlusion +314189001,Popliteal artery occlusion +314208002,Rapid atrial fibrillation +314902007,Peripheral angiopathy due to type 2 diabetes mellitus +315025001,Refractory angina +315026000,Transient myocardial ischemia +31529002,Thrombosis of arteries of upper extremity +315295003,Recurrent abdominal aortic aneurysm +3168002,Thrombophlebitis of intracranial venous sinus +31778009,Replacement of transvenous ventricular pacemaker electrode leads +32194006,Anomalous pulmonary venous drainage to hepatic veins +32413006,Transplantation of heart +32477003,Heart-lung transplant with recipient cardiectomy-pneumonectomy +328511000119109,Saddle embolus of pulmonary artery +33284002,Check artificial pacemaker for amperage threshold +33331003,Insertion of permanent atrial pacemaker with transvenous electrodes +33591000,Thrombosis of arteries of the extremities +33700007,Ruptured sinus of Valsalva into right atrium +33776000,"Insertion of permanent pacemaker with transvenous electrodes, atrio-ventricular sequential" +341751000000103,Congenital dextroposition of heart +343977001,Bundle of His pacing +344994008,Intraventricular pacing +34564005,Creation of shunt of ascending aorta to pulmonary artery +34881000119105,Peripheral vascular disease associated with another disorder +3515001,"Replacement of electronic heart device, pulse generator" +35162007,Ruptured sinus of Valsalva into right ventricle +35386004,Cavernous sinus syndrome +3545003,Diastolic dysfunction +3546002,Aortocoronary artery bypass graft with saphenous vein graft +3589003,Syphilitic pericarditis +35928006,Nocturnal angina +359597003,Single internal mammary-coronary artery bypass +359601003,"Coronary artery bypass with autogenous graft of internal mammary artery, single graft" +359789008,Takayasu's disease +360573001,Post-capillary pulmonary hypertension +360578005,Pulmonary hypertension secondary to raised pulmonary vascular resistance +36110001,Congenital anomaly of pulmonary artery +361278002,Mondor's phlebitis of the penis +36222008,Carcinoid heart disease +363436001,Malignant tumor of endocardium +363437005,Malignant tumor of myocardium +36422005,Transposition of pulmonary veins +36665001,Atrial aneurysm +368009,Heart valve disorder +3681008,Thrombophlebitis of torcular Herophili +37034001,Ligation of arteriovenous fistula of coronary artery +370513009,Fibrosis of cardiac pacemaker electrode +370552002,Dynamic aortic outflow tract obstruction +371037005,Systolic dysfunction +371038000,Terminal aortic occlusion +371039008,Thromboembolic disorder +37104009,Congenital enlargement of coronary sinus +371041009,Embolic stroke +371051005,Traumatic thrombosis of axillary vein +371067004,Hepatopulmonary syndrome +371068009,Myocardial infarction with complication +371807002,Atypical angina +371808007,Recurrent angina status post percutaneous transluminal coronary angioplasty +371809004,Recurrent angina status post coronary stent placement +371810009,Recurrent angina status post coronary artery bypass graft +371811008,Recurrent angina status post rotational atherectomy +371812001,Recurrent angina status post directional coronary atherectomy +371862006,Depression of left ventricular systolic function +371909000,Magnet induced pacing +371910005,Atrioventricular sequential pacing +373135009,Annular abscess of aortic root +373905003,Jervell and Lange-Nielsen syndrome +37943007,Multiple AND bilateral precerebral artery embolism +38208004,Removal of cardiac pacemaker and replacement with single-chamber cardiac device +38230003,Ruptured sinus of Valsalva into left ventricle +38315009,Repair of pacemaker with replacement of pulse generator +38340002,Temporary insertion of pacemaker into atrium by transvenous route +384681005,Patch repair of coronary artery +384683008,Replacement of cardiac pacemaker device with dual-chamber device +384684002,"Removal of cardiac pacemaker with replacement by single-chamber device, rate-responsive" +386815009,Repair of aneurysm of sinus of Valsalva +38739001,Hepatic vein thrombosis +387732009,Becker muscular dystrophy +38877003,Rheumatoid aortitis +39202005,"Coronary artery bypass with autogenous graft, four grafts" +39244004,Pericarditis due to myxedema +39589002,Hypoplasia of right heart +397193006,Percutaneous transluminal coronary angioplasty by rotoablation +39724006,"Anastomosis of internal mammary artery to coronary artery, double vessel" +397431004,"Percutaneous transluminal coronary angioplasty with rotoablation, single vessel" +397829000,Asystole +39785005,Disorder of pulmonary circulation +398220006,Ventricular pacing lead positioned +398274000,Coronary artery thrombosis +399046008,L - transposition of the great vessels +39905002,Scimitar syndrome +399211009,History of myocardial infarction +399216004,D - transposition of the great vessels +39987008,Congenital absence of right pulmonary artery +399957001,Peripheral arterial occlusive disease +400047006,Peripheral vascular disease +400972008,Renewal of intravenous cardiac pacemaker system +40198004,Thrombophlebitis of deep veins of lower extremity +40272001,Congenital absence of coronary sinus +40276003,Embolism of precerebral artery +40283005,Thrombophlebitis of superficial veins of lower extremity +402861007,Ischemic gangrene +404223003,Deep venous thrombosis of lower extremity +404667009,Retinal embolus +404668004,Calcific retinal embolus +404669007,Platelet-fibrin retinal embolus +404670008,Cholesterol retinal embolus +405545007,Mesenteric artery stenosis +405554005,Abscess of aortic root +405556007,Stenosis of lower limb artery +405557003,Occlusion of lower limb artery +405577005,Nontraumatic dissection of thoracic aorta +405580006,Traumatic aortocaval fistula +405585001,Traumatic aorto-enteric fistula +405588004,Upper limb artery stenosis +405598005,Aortocoronary artery bypass graft with two vein grafts +405599002,Aortocoronary artery bypass graft with three vein grafts +405768001,Autotransplantation of heart +40593004,Fibrillation +408665008,Pontine artery thrombosis +408666009,Dissection of abdominal aorta +4090005,Replacement of transvenous atrial and ventricular pacemaker electrode leads +410065004,Congenital anomaly of aortic arch AND/OR descending aorta +410429000,Cardiac arrest +410430005,Cardiorespiratory arrest +412787009,"Intellectual disability, congenital heart disease, blepharophimosis, blepharoptosis and hypoplastic teeth" +41334000,"Angina, class II" +41339005,Coronary angioplasty +413758000,Cardioembolic stroke +413905004,Congenital absence of heart structure +414024009,Disorder of coronary artery +414088005,Emergency coronary artery bypass graft +414089002,Emergency percutaneous coronary intervention +414545008,Ischemic heart disease +415070008,Percutaneous coronary intervention +41514002,Congenital supravalvular mitral stenosis +415991003,Disorder of cardiac ventricle +418461002,Angioplasty of coronary artery using fluoroscopic guidance with contrast +418551006,Laparoscopic coronary artery bypass using robotic assistance +418818005,Brugada syndrome +418824004,Off-pump coronary artery bypass +419132001,Minimally invasive direct coronary artery bypass +420300004,New York Heart Association Classification - Class I +420913000,New York Heart Association Classification - Class III +421365002,Peripheral circulatory disorder due to type 1 diabetes mellitus +421704003,New York Heart Association Classification - Class II +421895002,Peripheral vascular disorder due to diabetes mellitus +422166005,Peripheral circulatory disorder due to type 2 diabetes mellitus +422293003,New York Heart Association Classification - Class IV +422348008,Andersen Tawil syndrome +422967000,Maintenance of permanent cardiac pacemaker settings +422970001,Cardiac arrest due to trauma +423001006,Maintenance of temporary epicardial cardiac pacemaker settings +423168004,Cardiac arrest due to respiratory disorder +423191000,Cardiac arrest due to cardiac disorder +4240001,Rupture of aorta +424265001,Maintenance of temporary cardiac pacemaker system +424571008,Cardiac arrest due to drowning +424727007,Maintenance of temporary cardiac pacemaker settings +425366005,Maintenance of temporary epicardial cardiac pacemaker system +425414000,Bilateral renal artery stenosis +425420004,Thrombosis of internal carotid artery +425453009,Chronic nontraumatic dissection of thoracic aorta +425527003,Atheromatous embolus of lower limb +425771001,Enlarging abdominal aortic aneurysm +425932008,Thrombosis of posterior communicating artery +425963007,Aneurysm of ascending aorta +426104007,Repair of rupture of coronary artery +426270006,Aneurysm of suprarenal aorta +426948001,Aneurysm of descending aorta +427109009,Repair of arteriovenous malformation of coronary artery +427184002,Thrombosis of ulnar artery +427490006,Aneurysm of supraceliac aorta +427567003,Atheromatous embolus of upper limb +427592000,Occlusion of superior mesenteric artery +427665004,Paroxysmal atrial flutter +427775006,Deep venous thrombosis of profunda femoris vein +427776007,Thrombosis of the popliteal vein +427927008,Disorder related to cardiac transplantation +42861008,Thrombophlebitis of iliac vein +428752002,Recent myocardial infarction +42878004,Thrombosis of thoracic aorta +428781001,Deep venous thrombosis associated with coronary artery bypass graft +429064006,Implantation of biventricular cardiac pacemaker system +429243003,Sustained ventricular fibrillation +429434005,Thrombosis of superficial vein of lower limb +429542009,Implantation of intravenous biventricular cardiac pacemaker system +429559004,Typical angina +429575001,Construction of left ventricle to aorta tunnel with right ventricle to pulmonary trunk direct anastomosis +429620002,Construction of left ventricle to aorta tunnel with right ventricle to pulmonary artery valved conduit +429639007,Percutaneous transluminal balloon angioplasty with insertion of stent into coronary artery +42970005,Nonpyogenic thrombosis of intracranial venous sinus +429809004,Percutaneous transluminal angioplasty of coronary artery using fluoroscopic guidance with contrast +42999000,Chronic adhesive pericarditis +430294007,Reposition of permanent cardiac pacemaker using fluoroscopic guidance +431306005,Fluoroscopy of heart for checking of permanent pacemaker position +431702005,Removal of cardiac pacemaker lead using fluoroscopic guidance +431706008,Occlusion of artery of upper extremity +431846007,Replacement of permanent cardiac pacemaker using fluoroscopic guidance +432084000,Management of permanent pacemaker +432113002,Insertion of temporary cardiac pacemaker using fluoroscopic guidance +432953000,Fluoroscopy of heart for checking of cardiac pacemaker electrode position +433068007,Aneurysm of thoracic aorta +433714008,Removal of temporary cardiac pacemaker lead using fluoroscopic guidance +438483005,Thrombophlebitis of subclavian vein +438646004,Thrombophlebitis of axillary vein +438647008,Thrombosis of subclavian vein +438773007,Recurrent pulmonary embolism +438785004,Deep venous thrombosis of tibial vein +43910005,Congenital hypoplasia of aorta +439731006,Septic thrombophlebitis +440028005,Permanent atrial fibrillation +440059007,Persistent atrial fibrillation +441557008,Septic pulmonary embolism +442105001,Septic embolus of artery +442298000,Fracture of stent of coronary artery +442304009,Combined systolic and diastolic dysfunction +44241007,Heart valve stenosis +442439008,Atherosclerosis of bypass graft of limb +442559009,Bundle branch reentrant ventricular tachycardia +442693003,Atherosclerosis of autologous vein bypass graft of limb +442701004,Atherosclerosis of nonautologous biological bypass graft of limb +442735001,Atherosclerosis of nonautologous bypass graft of limb +442907005,Surgical removal of single chamber pacing cardioverter defibrillator electrode by transthoracic approach +442917000,Congenital long QT syndrome +443210003,Deep venous thrombosis of peroneal vein +443355007,Insertion of dual chamber pulse generator and repositioning of cardioverter defibrillation pulse generator lead +443358009,Surgical removal of transvenous electrode of dual chamber pacing cardioverter defibrillator pulse generator by transthoracic approach +443414005,Cor bovinum +443434006,Replacement of dual chamber pulse generator +443477007,Surgical removal of transvenous electrode of dual chamber pacing cardioverter defibrillator pulse generator by transvenous approach +443523006,Insertion of permanent transvenous electrode of dual chamber pulse generator +443622006,Insertion of temporary transvenous electrode of dual chamber cardiac pulse generator +443676006,Surgical removal of transvenous electrode of single chamber pacing cardioverter defibrillator pulse generator by transthoracic approach +443742008,Insertion of transvenous electrode of single chamber pacing cardioverter defibrillator pulse generator +443753002,Insertion of single chamber pacemaker pulse generator +443762000,Hypertrophic cardiomegaly +443816004,Insertion of temporary transvenous electrode of single chamber pacing pulse generator +443852000,Replacement of temporary transvenous electrode of dual chamber pulse generator +443958002,Surgical removal of transvenous electrode of single chamber pacing cardioverter defibrillator pulse generator by transvenous approach +444179007,Insertion of dual chamber pacemaker pulse generator +444325005,Deep vein thrombosis of bilateral lower extremities +444401001,Insertion of single chamber pacing cardioverter defibrillator pulse generator +444437006,Insertion of transvenous electrode of dual chamber pacing cardioverter defibrillator pulse generator +444542000,Insertion of single chamber pacing cardioverter defibrillator pulse generator and transvenous electrode +444566006,Replacement of cardiac pacemaker +444569004,Aneurysm of infrarenal abdominal aorta +444851003,Bifid apex of heart +445027003,Left superior caval vein persisting to coronary sinus +445106006,Congenital dilation of left pulmonary artery +445167000,Congenital dilation of right pulmonary artery +445176007,Congenital dilation of ascending aorta +445208002,Congenital hypoplasia of right pulmonary artery +445209005,Congenital hypoplasia of left pulmonary artery +445237003,Portopulmonary hypertension +445268004,Apex of heart anterior to cardiac base +445284003,Aortic sinus of Valsalva aneurysm from noncoronary sinus +445285002,Aortic sinus of Valsalva aneurysm from left coronary sinus +445286001,Aortic sinus of Valsalva aneurysm from right coronary sinus +445296005,Infracardiac location of anomalous pulmonary venous connections to portal system +445371009,Infracardiac location of anomalous pulmonary venous connections to inferior caval vein +445435009,Apex of heart posterior to cardiac base +445436005,Left superior caval vein persisting to left sided atrium +445543002,Intracardiac location of anomalous pulmonary venous connections to bilateral isomeric atriums +446432002,Pulmonary venous hypoplasia +446657003,Criss-cross heart with rightward rotation +446667008,Two atrioventricular valves in double inlet ventricle +446668003,Obstructed pulmonary venous connection due to extrinsic compression +446813000,Left atrial hypertrophy +446890001,Obstructed pulmonary venous connection at coronary sinus orifice +446909006,Midline apex of heart +446916007,Functionally univentricular heart +447269006,Persistent common pulmonary vein +447274003,Obstructed pulmonary venous connection due to intrinsic narrowing +447275002,Alveolar capillary dysplasia with pulmonary venous misalignment +447289007,Criss-cross heart with leftward rotation +447318008,Obstructed pulmonary venous connection at interatrial communication +447498008,Obstructed pulmonary venous connection due to extrinsic compression between right pulmonary artery and trachea +447528003,Obstructed pulmonary venous connection due to extrinsic compression at diaphragm +447571007,Obstructed pulmonary venous connection due to extrinsic compression between left pulmonary artery and bronchus +447661004,Diverticulum of coronary sinus +447663001,Pulmonary venous confluence remote from left atrium +447664007,Partial anomalous pulmonary venous connection of part of left lung +447666009,Divided left atrium with all pulmonary veins to proximal chamber and then to left atrium +447667000,Divided left atrium with all pulmonary veins to proximal chamber without communication to left atrium +447668005,Discontinuous pulmonary arteries +447691009,Pulmonary venous confluence in direct proximity to left atrium +447700007,Distal aortopulmonary window with minimal superior rim +447701006,Intermediate aortopulmonary window with adequate superior and inferior rim +447702004,Confluent aortopulmonary window with minimal superior and inferior rim +447703009,Double aortic arch with left arch dominant and coarctation of right arch +447772003,Persisting fifth aortic arch with double barrell arch +447773008,Proximal aortopulmonary window with minimal inferior rim +447786004,Creation of anastomosis from ascending aorta to main pulmonary artery +447812003,Left superior vena cava persisting to right atrium and left atrium +447813008,Pulmonary venous confluence in horizontal orientation +447814002,Pulmonary venous confluence in vertical orientation +447817009,Obstruction of aortic arch +447824005,Congenital abnormality of left atrium +447825006,Congenital abnormality of middle cardiac vein +447827003,Partial anomalous pulmonary venous connection of entire right lung +447832002,Total anomalous pulmonary venous connection of supracardiac type +447840008,Stenosis of right pulmonary artery +447846002,Obstruction of ascending aorta +447849009,Double aortic arch with right arch dominant and atresia of left arch +447850009,Double aortic arch with right arch dominant and coarctation of left arch +447860000,Partial anomalous pulmonary venous connection of part of right lung +447861001,Partial anomalous pulmonary venous connection with anomalous veins connecting first to pulmonary venous confluence +447879002,Creation of anastomosis from ascending aorta to right pulmonary artery +447901004,Aortopulmonary window with tubular connection +447902006,Atresia of left superior vena cava +447903001,Coarctation of right pulmonary artery +447913009,Completely unroofed coronary sinus defect in left atrium +447914003,Total anomalous pulmonary venous connection of intracardiac type +447919008,Univentricular atrioventricular connection with absent right sided atrioventricular connection +447925007,Hypoperfusion of left pulmonary artery due to preferential flow to right pulmonary artery +447926008,Hypoperfusion of right pulmonary artery due to preferential flow to left pulmonary artery +447928009,Double aortic arch with balanced arches +447929001,Double aortic arch with left arch dominant +447930006,Double aortic arch with right arch dominant +447932003,Double outlet ventriculoarterial connections +447938004,Congenital abnormality of cardiac vein +447939007,Partial anomalous pulmonary venous connection of entire left lung +447950005,Creation of anastomosis from ascending aorta to left pulmonary artery +447962009,Divided left atrium with restrictive outlet of proximal chamber to left atrium +447968008,Descending aorta anterior and same side as azygos vein with azygos continuity of inferior vena cava +447970004,Double aortic arch with left arch dominant and atresia of right arch +447976005,Removal of cardiac biventricular permanent pacemaker using fluoroscopic guidance +447988007,Common arterial trunk with pulmonary arteries arising from trunk and unobstructed aortic arch +447997006,Vascular ring with retrotracheal right pulmonary artery from ascending aorta +447998001,Single ventricular outlet above right ventricle +447999009,Single ventricular outlet above left ventricle +448000003,Right superior vena cava connecting to left atrium and right atrium +448027004,Supravalvar pulmonary trunk stenosis +448059006,Pulmonary trunk absent with absent left pulmonary artery +448060001,Pulmonary trunk absent with absent right pulmonary artery +448061002,Shelf-like supravalvar aortic stenosis +448063004,Congenital abnormality of posterior cardiac vein of left ventricle +448066007,Divided left atrium with nonrestrictive outlet of proximal chamber to left atrium +448067003,Recoarctation of aorta +448072007,Single inlet ventricle with absent atrioventricular connection +448075009,Uniatrial biventricular connection with absent right sided atrioventricular connection with straddling valve +448078006,Vascular ring with right aortic arch and right arterial ligament with absent left pulmonary artery +448079003,Vascular ring with right aortic arch and right patent arterial duct with absent left pulmonary artery +448080000,Single ventricular outlet above ventricle of indeterminate morphology +448081001,Hepatic vein to coronary sinus +448084009,Absent pulmonary trunk +448086006,Atresia of pulmonary trunk with absent left pulmonary artery +448087002,Atresia of pulmonary trunk with absent right pulmonary artery +448092000,Vascular ring due to aberrant subclavian artery and bilateral arterial ducts +448097006,Abnormal course of aortic arch +448098001,Aneurysm of aortic sinus of Valsalva with protrusion into pulmonary artery +448099009,Aneurysm of aortic sinus of Valsalva with protrusion into right atrium +448100001,Aneurysm of aortic sinus of Valsalva with protrusion into right ventricle +448104005,Localized supravalvar aortic stenosis at sinutubular junction +448105006,Anomalous origin of pulmonary artery from patent arterial duct +448113007,Right superior vena cava connecting to coronary sinus +448115000,Aneurysm of aortic sinus of Valsalva with protrusion into left atrium +448116004,Aneurysm of aortic sinus of Valsalva with protrusion into left ventricle +448117008,Aneurysm of aortic sinus of Valsalva with protrusion into pericardial cavity +448120000,Common arterial trunk with crossed over pulmonary arteries +448150008,Interrogation of cardiac pacemaker +448153005,Vascular ring with left aortic arch and right arterial duct arising from aberrant retroesophageal right subclavian artery +448154004,Vascular ring with left aortic arch and right arterial duct arising from retroesophageal aortic diverticulum +448158001,Abnormality of thoracoabdominal aorta +448181004,Anomalous coronary venous return +448242007,Repositioning of cardiac pacemaker lead using fluoroscopic guidance +448277007,Midline posterior apex of heart +448278002,Coronary sinus drainage cephalad to left superior vena cava +448280008,Malalignment of aortic sinus in relation to pulmonary sinus +448303009,Vascular ring with left aortic arch to right descending aorta and right arterial ligament +448304003,Vascular ring with left aortic arch to right descending aorta and right patent arterial duct +448305002,Vascular ring with malrotation and dextroversion of heart and hypoplasia of right lung and left arterial duct +448320008,Divided left atrium with some pulmonary veins to proximal chamber +448328001,Aneurysm of aortic sinus of Valsalva without rupture +448332007,Left superior vena cava persisting to right sided atrium +448356006,Coronary sinus drainage cephalad to right superior vena cava +448357002,Midline anterior apex of heart +448471006,Congenital abnormality of ascending aorta +448472004,Congenital abnormality of pulmonary trunk +448478000,Systemic to pulmonary collateral artery from coronary artery +448486000,Anomalous pulmonary to systemic collateral vein +448487009,Anomalous pulmonary venous connection of mixed type +448499002,Infracardiac location of anomalous pulmonary venous connection +448500006,Intracardiac location of anomalous pulmonary venous connection +448501005,Interrupted left inferior vena cava +448510002,Stenosis of left pulmonary artery +448517004,Vascular ring with left aortic arch and retroesophageal right descending aorta and right arterial duct arising from aortic diverticulum and aberrant right subclavian artery +448528000,Aneurysm of aortic sinus of Valsalva with rupture to pericardial cavity +448577008,Muscular subvalvar atresia of aorta +448590001,Maintenance of intravenous cardiac pacemaker system +448595006,Scimitar syndrome with additional anomalous pulmonary venous connection +448599000,Total anomalous pulmonary venous connection of infracardiac type +448611005,Vascular ring with left aortic arch and retrotracheal right patent arterial duct +448612003,Single ventricular outlet above both ventricles +448614002,Inferior vena cava anterior and same side as descending aorta +448620001,Azygos continuation of inferior vena cava to right superior vena cava +448624005,Uniatrial biventricular connection with absent left sided atrioventricular connection with straddling valve +448625006,Univentricular atrioventricular connection with absent left sided atrioventricular connection +448627003,Vascular ring with left aortic arch and right arterial duct arising from aberrant retroesophageal brachiocephalic artery +448628008,Vascular ring with left aortic arch and right arterial duct arising from retroesophageal aortic diverticulum and aberrant right subclavian artery +448629000,Vascular ring with left aortic arch and right arterial ligament +448630005,Vascular ring with left aortic arch and right patent arterial duct +448632002,Left inferior vena cava connecting to left atrium and right atrium +448637008,Coarctation of left pulmonary artery +448645003,Aortic arch hypoplasia between subclavian and common carotid arteries +448646002,Aortic arch hypoplasia distal to subclavian artery +448699008,Thoracotomy and removal of cardiac pacemaker electrodes +448721009,Abnormal course of aortic arch and descending aorta +448722002,Abnormality of abdominal aorta +448723007,Aneurysm of aortic sinus of Valsalva with rupture to left atrium +448724001,Aneurysm of aortic sinus of Valsalva with rupture to left ventricle +448725000,Continuity between aortic valve and mitral valve +448727008,Total anomalous pulmonary venous connections of mixed type +448728003,Supracardiac location of anomalous pulmonary venous connection +448742006,Abnormality of aortic arch +448744007,Aneurysm of aortic sinus of Valsalva with rupture to pulmonary artery +448745008,Aneurysm of aortic sinus of Valsalva with rupture to right atrium +448746009,Aneurysm of aortic sinus of Valsalva with rupture to right ventricle +448747000,Common arterial trunk with pulmonary origin from truncal valve sinus +448782004,Interrupted right inferior vena cava +448783009,Pulmonary vein dilatation +448809003,Common arterial trunk with obstruction of aortic arch +448840005,Repair of supravalvar aorta using patch +448869001,Replacement of cardiac biventricular permanent pacemaker using fluoroscopic guidance +448887003,Common arterial trunk with isolated pulmonary artery +448898002,Outflow tract abnormality in solitary indeterminate ventricle +448905005,Dilatation of aortic sinus of Valsalva +448965008,Inferior vena cava connecting to right atrium and left atrium +449009009,Left inferior vena cava connecting to left sided atrium +449010004,Left inferior vena cava connecting to right sided atrium +44902004,Thrombosis of penis +449025004,Vascular ring with left aortic arch and right arterial duct ligament arising from retroesophageal aortic diverticulum with aberrant right subclavian artery +449085001,Pulmonary artery connecting to coronary artery via collateral artery +449119000,Obstruction of aortic outflow +449120006,Obstruction of pulmonary outflow tract +449125001,Congenital stenosis of pulmonary artery +449184004,Dilatation of descending aorta +449185003,Dilatation of aortic sinutubular junction +449188001,Left superior vena cava persisting to coronary sinus and then to right sided atrium +449232001,Aortic arch hypoplasia between carotid arteries +449271003,Residual coarctation of aorta +449350006,Pulmonary artery with absent proximal arterial connection +449397007,Insertion of permanent cardiac pacemaker pulse generator and electrode +449425007,Intracardiac location of anomalous pulmonary venous connection to coronary sinus +449426008,Left sided azygos continuation of inferior vena cava to left superior vena cava +449427004,Double aortic arch with right arch dominant and left arch patent +449428009,Divided left atrium with all pulmonary veins to proximal chamber and then to left atrium with additional pulmonary venous chamber communication +449429001,Divided left atrium with some pulmonary veins to proximal chamber draining to right atrium +449430006,Double aortic arch with left arch dominant and right arch patent +449433008,Diffuse stenosis of left pulmonary artery +449434002,Supracardiac location of anomalous pulmonary venous connection to left superior vena cava +449435001,Infracardiac location of anomalous pulmonary venous connection with two descending veins +449436000,Divided left atrium with some pulmonary veins to proximal chamber draining to left atrium +449440009,Divided left atrium with all pulmonary veins to proximal chamber without communication to left atrium with extracardiac pulmonary venous chamber communication +449441008,Divided left atrium with all pulmonary veins to proximal chamber without communication to left atrium with pulmonary venous chamber communication to right atrium +449442001,Congenital abnormality of great cardiac vein +449443006,Supracardiac location of anomalous pulmonary venous connection to left sided vertical vein +449444000,Infracardiac location of anomalous pulmonary venous connection to hepatic vein +449451009,Supracardiac location of anomalous pulmonary venous connection to hemiazygos vein +449452002,Intracardiac location of anomalous pulmonary venous connection to right atrium +449458003,Right superior vena cava connecting to coronary sinus and then to left sided atrium +449467003,Diffuse stenosis of right pulmonary artery +449492000,Divided left atrium with all pulmonary veins to proximal chamber and then to left atrium with additional pulmonary venous chamber communication to right atrium +449493005,Supracardiac location of anomalous pulmonary venous connection to right sided vertical vein +449494004,Supracardiac location of anomalous pulmonary venous connection to right superior vena cava +449495003,Infracardiac location of anomalous pulmonary venous connection to patent ductus venosus +449513006,Anomalous pulmonary venous connection of mixed type with one pulmonary venous confluence +449514000,Intracardiac location of anomalous pulmonary venous connection to midline with isomeric atria +449521000,Anomalous pulmonary venous connection of mixed type with two pulmonary venous confluences +449523002,Right superior vena cava persisting to coronary sinus and then to right sided atrium +449532000,Congenital abnormality of anterior cardiac vein +449533005,Supracardiac location of anomalous pulmonary venous connection to azygos vein +449536002,Double aortic arch with right arch dominant and atresia of left arch and left ligament to diverticulum +449547009,Right pulmonary artery with absent proximal arterial connection +449551006,Single stenosis of left pulmonary artery +449559008,Multiple stenoses of left pulmonary artery +449560003,Multiple stenoses of right pulmonary artery +449576007,Left pulmonary artery with absent proximal arterial connection +449587004,Divided left atrium with all pulmonary veins to proximal chamber and then to left atrium with additional pulmonary venous chamber extracardiac communication +449589001,Single stenosis of right pulmonary artery +449593007,Divided left atrium with some pulmonary veins to proximal chamber draining to left atrium and others connecting directly to left atrium +449594001,Divided left atrium with some pulmonary veins to proximal chamber draining to left atrium and others connecting anomalously +449595000,Divided left atrium with some pulmonary veins to proximal chamber draining to right atrium and others connecting anomalously +449596004,Divided left atrium with some pulmonary veins to proximal chamber draining to right atrium and others connecting directly to left atrium +449863006,Insertion of pacemaker for control of atrial fibrillation +449873008,Atherosclerotic plaque disruption with thrombosis of artery +449926001,Inflammatory thrombosis of superficial vein of lower leg +450304006,Coarctation of suprarenal abdominal aorta +450305007,Coarctation of infrarenal abdominal aorta +450312003,Coarctation of aorta between subclavian artery and common carotid artery +450313008,Coarctation of aorta between left common carotid artery and right common carotid artery +450314002,Vascular ring with right aortic arch and left patent ductus arteriosus +450315001,Vascular ring with right aortic arch and left ligamentum arteriosum +450811002,Maintenance of battery of cardiac pacemaker system +450816007,Revision of transplantation of heart +450820006,Replacement of pulse generator of permanent cardiac pacemaker using fluoroscopic guidance +450821005,Replacement of pulse generator of implantable cardioverter defibrillator using fluoroscopic guidance +45237002,Congenital dilatation of aorta +45281005,Atherosclerosis of renal artery +45492009,Congenital stenosis of superior vena cava +4557003,Preinfarction syndrome +45669002,Cardio-omentopexy +45720008,"Implantation of electrode into cardiac ventricle, replacement" +458088003,Major systemic to pulmonary collateral artery +45894003,Medionecrosis of aorta +459062008,Fatal congenital nonlysosomal heart glycogenosis +459160003,Abscess at site of aortic coarctation +459163001,Infective endarteritis at site of aortic coarctation +459164007,Systemic to pulmonary collateral artery from descending thoracic aorta +459165008,Systemic to pulmonary collateral artery from abdominal aorta +459173004,Infective endarteritis at site of aortopulmonary window +45921003,Removal of cardiac pacemaker electrodes with replacement +460307002,Systemic to pulmonary collateral artery from right carotid artery +460312001,Systemic to pulmonary collateral artery from left carotid artery +460365008,Systemic to pulmonary collateral artery from right renal artery +460370001,Systemic to pulmonary collateral artery connecting with artery +460375006,Systemic to pulmonary collateral artery from left renal artery +460380002,Systemic to pulmonary collateral artery from right brachiocephalic artery +460387004,Systemic to pulmonary collateral artery from left brachiocephalic artery +460589002,Vascular ring with right aortic arch and left ligamentum arteriosum between left subclavian artery and left common carotid artery +460590006,Vascular ring with right aortic arch and left ligamentum arteriosum with anomalous retroesophageal left subclavian artery +460591005,Vascular ring with right aortic arch and left ductus arteriosus from anomalous retroesophageal left subclavian artery +460592003,Vascular ring with right aortic arch and left ductus arteriosus from retroesophageal diverticulum of aorta and anomalous left subclavian artery +460593008,Vascular ring with right aortic arch and left ductus arteriosus from anomalous retroesophageal brachiocephalic artery +460594002,Vascular ring with right aortic arch and left ductus arteriosus from retroesophageal diverticulum of aorta +460598004,Acquired stenosis of superior vena cava +460609006,Anomalous insertion of ductus arteriosus +460610001,Anomalous insertion of ductus arteriosus into pulmonary trunk +460611002,Anomalous insertion of ductus arteriosus into right pulmonary artery +460612009,Ductus arteriosus dependent pulmonary circulation +46085004,Thrombosis of retinal vein +460906001,Vascular ring with mirror image branching of right aortic arch and left ligamentum arteriosum +461000119108,History of myocardial infarction in last eight weeks +461089003,Cardiac abnormality due to heart abscess +461090007,Right ductus arteriosus +461091006,Patent right ductus arteriosus +461102008,Anomalous insertion of ductus arteriosus into distal left pulmonary artery +461366002,Congenital hypoplasia of descending aorta +461371009,Congenital hypoplasia of abdominal aorta +461376004,Congenital hypoplasia of thoracoabdominal aorta +461386003,Patent ductus arteriosus with normal origin and insertion +461390001,Anomalous insertion of ductus arteriosus into unknown site +461407005,Acquired stenosis of pulmonary venous structure +461408000,Acquired abnormality of pulmonary venous structure +461557000,Congenital atresia of aortic arch +461562004,Atresia of aortic arch with fibrous cord +461567005,Atresia of aortic arch with fibrous cord distal to subclavian artery +461572001,Atresia of aortic arch with fibrous cord between subclavian artery and common carotid artery +461577007,Atresia of aortic arch with fibrous cord between left common carotid artery and right common carotid artery +461587006,Congenital luminal atresia of aortic arch distal to subclavian artery +461592008,Congenital luminal atresia of aortic arch between subclavian artery and common carotid artery +461597002,Congenital luminal atresia of aortic arch between left common carotid artery and right common carotid artery +461602009,Acquired complete obstruction of aortic arch +461609000,Acquired luminal obstruction of aortic arch +461614001,Acquired luminal obstruction of aortic arch distal to subclavian artery +461619006,Acquired luminal obstruction of aortic arch between subclavian artery and common carotid artery +461624009,Acquired luminal obstruction of aortic arch between left common carotid artery and right common carotid artery +461629004,Right aortic arch branching pattern +46253008,Thrombophlebitis of lower extremities +4641009,Myxedema heart disease +46847001,Chronic pulmonary edema +46935006,Stokes-Adams syndrome +47040006,Disorder of aorta +47058000,Heart transplant with recipient cardiectomy +471268000,Middle aortic syndrome +471274000,Systemic to pulmonary collateral artery contributing to dual lung supply +471851005,Disorder of myocardium associated with rejection of cardiac transplant +471863000,Disorder of myocardium due to sickle cell hemoglobinopathy +472101004,Interruption of aortic arch distal to subclavian artery +472102006,Interruption of aortic arch between subclavian artery and common carotid artery +472103001,Interruption of aortic arch between left common carotid artery and right common carotid artery +472702003,Fetal pulmonary outflow tract obstruction due to twin to twin transfusion syndrome +472703008,Pseudoacardia +472750004,Stenosis of superior vena cava as complication of procedure +472756005,Stenosis of anastomosis between pulmonary venous confluence and left atrium after prior repair of anomalous pulmonary venous connection +472757001,Pulmonary venous hypertension as complication of procedure +472758006,Pulmonary venous hypertension due to compression of pulmonary great vein +472759003,Pulmonary venous hypertension due to compression of pulmonary great vein by sclerosing mediastinitis +472760008,Pulmonary venous hypertension due to compression of pulmonary great vein by lymphadenopathy +472761007,Pulmonary venous hypertension due to compression of pulmonary great vein by neoplasm +472762000,Disorder of right atrium +472763005,Disorder of left atrium +472764004,Disorder of right atrium as complication of procedure +472768001,Obstruction of pulmonary great vein due to compression by right atrial dilatation +472789005,Obstruction of surgically constructed pulmonary venous pathway as complication of procedure +472790001,Pulmonary venous hypertension due to disorder of left heart +472791002,Stenosis of pulmonary great vein as complication of procedure +472820000,Abnormal ventriculoarterial connection with usual origin of left coronary artery from aortic sinus to right of nonfacing aortic sinus and usual origin of right coronary artery from aortic sinus to left of nonfacing aortic sinus +473360003,Thrombus of left atrium +473393007,Congenital occlusion of coronary sinus +47780009,Superficial thrombophlebitis complicating pregnancy AND/OR puerperium +47800001,Repair of coronary arteriocardiac chamber fistula +48121000,Congenital cardiomegaly +48248005,Thrombophlebitis of inferior sagittal sinus +48431000,"Anastomosis of thoracic artery to coronary artery, single" +48520006,Congenital atresia of cardiac vein +48601002,Thrombosis of precerebral artery +49436004,Atrial fibrillation +49778009,Idiopathic pulmonary arteriosclerosis +49956009,Antepartum deep phlebothrombosis +50511005,Electronic analysis of dual-chamber internal pacemaker system with reprogramming +50570003,Aneurysm of coronary vessels +50799005,Atrioventricular dissociation +51096002,Legal abortion with pulmonary embolism +51274000,Atherosclerosis of arteries of the extremities +51310003,Electronic analysis of dual-chamber internal pacemaker system without reprogramming +51677000,Atheroembolism of renal arteries +51789008,Congenital malposition of cardiac apex +52156004,Femoral artery thrombosis +52496006,Thrombophlebitis of femoropopliteal vein +52535005,Chronic constrictive pericarditis +52757001,Congenital supravalvular pulmonary stenosis +5370000,Atrial flutter +53741008,Coronary arteriosclerosis +54160000,Congenital aneurysm of sinus of Valsalva +54636000,Cardiomyopexy +54682008,Congenital hypoplasia of pulmonary artery +54687002,Arterial embolism +54866009,Initial implantation of cardiac single-chamber device +54974006,"Insertion of permanent pacemaker with transvenous electrodes, ventricular" +5499009,Pulmonary hypertensive venous disease +55455004,Revision of pacemaker electrode leads +55589000,Illegal abortion with pulmonary embolism +56265001,Heart disease +56272000,Postpartum deep phlebothrombosis +56970000,Central shunt with prosthetic graft +5726007,Removal of epicardial electrodes +57297009,"Implantation of electrode into cardiac atrium and ventricle, replacement" +57809008,Myocardial disease +57834008,Pulmonary artery thrombosis +58123006,Failed attempted abortion with pulmonary embolism +58211007,Removal of electronic heart device battery +58632007,Repair of cardiac pulse generator +58863009,Initial implantation of cardiac dual-chamber device +59021001,Angina decubitus +59047005,Aortointestinal fistula +59218006,Temporary transcutaneous pacing +59282003,Pulmonary embolism +59494005,Congenital septal defect of heart +59631007,Anomalous pulmonary venous drainage +59877000,Congenital anomaly of aorta +60106004,Common arterial trunk and separate origin of pulmonary arteries +60446003,Thyrotoxic heart disease +60787001,Congenital hypoplasia of aortic arch +609480009,Induced termination of pregnancy complicated by pulmonary embolism +60985004,"Implantation of cardiac dual-chamber device, replacement" +61179004,Cardiac beriberi +61490001,"Angina, class I" +61612001,Syphilitic aortic incompetence +61959006,Common truncus arteriosus +62067003,Hypoplastic left heart syndrome +62583006,Puerperal phlegmasia alba dolens +62881002,Removal of cardiac pacemaker +63247009,Williams syndrome +63739005,Coronary occlusion +63795001,Thrombosis of intracranial venous sinus of pregnancy AND/OR puerperium +63934006,Overriding aorta +64156001,Thrombophlebitis +64715009,Hypertensive heart disease +64775002,Vertebral artery thrombosis +64862009,Congenital rhabdomyoma of heart +65084004,Vertebral artery embolism +651000119108,Acute deep vein thrombosis of lower limb +65198009,Arterial thrombosis +65219008,Subcutaneous implantation of cardiac pacemaker +65340007,Aneurysm of heart +65861005,Excision of aneurysm of coronary artery +65936006,Repositioning of cardioverter/defibrillator pulse generator +66189004,Postmyocardial infarction syndrome +66403007,Vascular ring of aorta +66595008,Drug-related myocardial necrosis syndrome +66620003,Hyaline necrosis of aorta +66718009,Check artificial pacemaker by slew rate check +66816004,Implantation of cardiac temporary transvenous pacemaker system during and immediately following cardiac surgery +66858001,Anomalous pulmonary venous drainage to superior vena cava +66877004,Phlegmasia cerulea dolens +66923004,Phlegmasia alba dolens +67166004,Aortocoronary artery bypass graft +67362008,Aortic aneurysm +67486009,Postpartum pelvic thrombophlebitis +67682002,Coronary artery atheroma +677801000119100,Cholesterol retinal embolus of left eye +677811000119102,Cholesterol retinal embolus of right eye +680841000119109,Cholesterol embolus of retinal artery of bilateral eyes +68092007,Anomalous origin of pulmonary artery +682004,Thrombosis complicating pregnancy AND/OR puerperium +68237008,Partial anomalous pulmonary venous connection +68478007,Central retinal vein occlusion +68667005,Insertion of permanent transvenous electrodes +690491000119104,History of cardiomyopathy +690791000119107,Penetrating ulcer of aorta +69158002,Intra-atrial pacing +69357003,Pulmonary thrombosis +697896007,Precapillary pulmonary hypertension +697897003,Heritable pulmonary arterial hypertension +697898008,Idiopathic pulmonary arterial hypertension +697899000,Heritable pulmonary arterial hypertension due to bone morphogenetic protein receptor type II mutation +697900005,Heritable pulmonary arterial hypertension due to activin A receptor type II-like kinase 1 or endoglin mutation +697901009,Pulmonary arterial hypertension caused by toxin +697902002,Associated pulmonary arterial hypertension +697903007,Pulmonary arterial hypertension associated with connective tissue disease +697904001,Pulmonary arterial hypertension associated with human immunodeficiency virus infection +697905000,Pulmonary arterial hypertension associated with congenital heart disease +697906004,Pulmonary arterial hypertension associated with congenital systemic-to-pulmonary shunt +697907008,Pulmonary arterial hypertension associated with schistosomiasis +697908003,Pulmonary arterial hypertension associated with chronic hemolytic anemia +697909006,Pulmonary veno-occlusive disease and/or pulmonary capillary hemangiomatosis +697910001,Pulmonary hypertension due to lung disease and/or hypoxia +697911002,Pulmonary hypertension due to chronic obstructive pulmonary disease +697912009,Pulmonary hypertension due to interstitial lung disease +697913004,Pulmonary hypertension due to pulmonary disease with mixed restrictive and obstructive pattern +697914005,Pulmonary hypertension due to sleep-disordered breathing +697915006,Pulmonary hypertension due to alveolar hypoventilation disorder +697916007,Pulmonary hypertension due to developmental abnormality of the lung +697917003,Pulmonary hypertension due to hematological disorder +697918008,Pulmonary hypertension due to myeloproliferative disorder +697919000,Pulmonary hypertension due to post-splenectomy hematological disorder +697920006,Pulmonary hypertension in systemic disorder +697921005,Pulmonary hypertension in sarcoidosis +697922003,Pulmonary hypertension in Langerhans cell histiocytosis +697923008,Pulmonary hypertension in lymphangioleiomyomatosis +697924002,Pulmonary hypertension in neurofibromatosis +697925001,Pulmonary hypertension due to systolic systemic ventricular dysfunction +697926000,Pulmonary hypertension due to diastolic systemic ventricular dysfunction +697927009,Pulmonary hypertension due to left-sided valvular heart disease +697928004,Pulmonary venous hypertension due to congenital stenosis of pulmonary vein +698270004,Cardiac arrhythmia associated with genetic disorder +698272007,Short QT syndrome +698593009,History of non-ST segment elevation myocardial infarction +698627005,Postoperative phlebitis and thrombophlebitis of intracranial sinuses +698816006,Chronic occlusion of artery of extremity +699123000,Removal of single-chamber cardiac pacemaker with replacement by dual-chamber cardiac pacemaker +699125007,Insertion of programmable cardiac pacemaker +699135001,Implantation of cardiac defibrillator lead +699136000,Insertion of pulse generator of implantable cardioverter defibrillator +699256006,Timothy syndrome type 1 +699280005,Repair of aortic root +699297004,Blepharophimosis-intellectual disability syndrome Maat-Kievit-Brunner type +699298009,"Blepharophimosis-mental retardation syndrome, Say-Barber-Biesecker-Young-Simpson type" +699300009,Oculofaciocardiodental syndrome +699352005,Repair of ascending aorta +69954004,Thrombophlebitis of breast +699706000,Embolism of middle cerebral artery +699748007,Cardiorespiratory arrest with successful resuscitation +70195006,Congenital anomaly of superior vena cava +702374000,Neonatal noninfectious cerebral venous sinus thrombosis +703073006,Cardiac pacemaker procedure using fluoroscopic guidance +703158007,Embolism of internal auditory artery +703162001,Bradycardic cardiac arrest +703214003,Silent coronary vasospastic disease +703243006,Acquired aneurysm of pulmonary artery +703244000,Acquired stenosis of left pulmonary artery +703245004,Acquired stenosis of right pulmonary artery +703246003,Acquired pulmonary venous obstruction +703258003,Acquired pulmonary trunk stenosis +703277001,Deep venous thrombosis of femoropopliteal vein +703307003,Acquired abnormality of pulmonary arterial tree +703308008,Acquired dissection of pulmonary artery +703355003,Pulmonary hypertension due to vasculitis +703357006,Acquired discontinuity of pulmonary arteries +703385008,Anomalous origin of pulmonary artery from ascending aorta +703636009,Pulmonary oil microembolism +704115002,Revision of cardiac pacemaker electrode using fluoroscopic guidance +705129007,Thrombosis of middle cerebral artery +70573000,Insertion of pacemaker pulse generator +70589002,Removal of epicardial electrodes with replacement of epicardial lead +70602002,Pseudocoarctation of aorta +70607008,Thrombosis of superior sagittal sinus +706870000,Acute pulmonary embolism +706923002,Longstanding persistent atrial fibrillation +707200002,Descending aorta anterior and same side as azygos vein with absent inferior vena cava +707371002,Congenital stenosis of left pulmonary artery +707372009,Congenital stenosis of right pulmonary artery +707437005,Pulmonary capillaritis +707476006,Stenosis of right pulmonary artery as complication of procedure +707477002,Stenosis of left pulmonary artery as complication of procedure +707478007,Pulmonary trunk stenosis as complication of procedure +707665002,Pulmonary arterial tree abnormality as complication of procedure +707667005,Obstruction of pulmonary vein as complication of procedure +707668000,Pulmonary vein abnormality as complication of procedure +707828002,Percutaneous transluminal cutting balloon angioplasty of coronary artery +708966001,Percutaneous removal of cardiac pacemaker electrode +70933002,Aortitis +709584004,Atherosclerosis of bypass graft of lower limb +709585003,Atherosclerosis of nonautologous biological bypass graft of lower limb +709587006,Atherosclerosis of autologous bypass graft of lower limb +709597002,Acute thrombosis of superficial vein of lower limb +709602009,Chronic thrombosis of superficial vein of lower limb +709687000,Chronic deep vein thrombosis of pelvic vein +70995007,Pulmonary hypertension +710167004,Recurrent deep vein thrombosis +711166001,Removal of implantable cardiac pacemaker +712578006,Aneurysm of aortic arch +712866001,Resting ischemia co-occurrent and due to ischemic heart disease +713029000,Dissection of thoracoabdominal aorta +713030005,Chronic dissection of thoracic aorta +713044004,Removal of cardiac pacemaker using fluoroscopic guidance +713078005,Pulmonary embolism on long-term anticoagulation therapy +713405002,Subacute ischemic heart disease +713419002,Intraoperative cardiorespiratory arrest +713689002,Repair of coronary artery +713825007,Renal artery stenosis of transplanted kidney +71444005,Cerebral arterial thrombosis +715364001,Familial abdominal aortic aneurysm +715395008,Familial atrial fibrillation +715765002,Resection of ascending thoracic aorta using prosthetic graft with cardiopulmonary bypass +715987000,Congenital heart defect with round face and developmental delay syndrome +716050002,Cardiac arrest during surgery +716740009,Potter sequence cleft lip and palate cardiopathy syndrome +7169009,Congenital supravalvular aortic stenosis +71719003,Thrombophlebitis of retinal vein +717859007,"Hydrocephalus, cardiac malformation, dense bone syndrome" +717943008,"Brain malformation, congenital heart disease, postaxial polydactyly syndrome" +718212006,Mitochondrial encephalocardiomyopathy due to transmembrane protein 70 mutation +718216009,Partial defect of atrioventricular canal +718556007,Cranio-cerebello-cardiac dysplasia syndrome +718681002,Oro-facial digital syndrome type 11 +71908006,Ventricular fibrillation +71932004,Cardiac dilatation +719379001,Microcephalus with cardiac defect and lung malsegmentation syndrome +719395001,Microcephalus facio-cardio-skeletal syndrome Hadziselimovic type +719400000,Lethal faciocardiomelic dysplasia +719456001,Cleft lip and cleft palate with intestinal malrotation and cardiopathy syndrome +719907006,Timothy syndrome type 2 +720448006,Typical atrial flutter +720567008,Bosley Salih Alorainy syndrome +720575002,Braddock syndrome +720605009,Cardiac anomaly and heterotaxy syndrome +720606005,Cardiocranial syndrome Pfeiffer type +720639008,"Coloboma, congenital heart disease, ichthyosiform dermatosis, intellectual disability ear anomaly syndrome" +721009008,Heart defect and limb shortening syndrome +721015008,Hydrocephalus with endocardial fibroelastosis and cataract syndrome +721073008,Short stature with webbed neck and congenital heart disease syndrome +721238001,Acquired anomaly of pulmonary artery +721976003,Lung agenesis with heart defect and thumb anomaly syndrome +722006004,Isotretinoin embryopathy-like syndrome +722027009,Kallman syndrome with heart disease +722051004,"Obesity, colitis, hypothyroidism, cardiac hypertrophy, developmental delay syndrome" +722206009,"Pancreatic hypoplasia, diabetes mellitus, congenital heart disease syndrome" +72242008,Postductal coarctation of aorta +722461004,Meacham syndrome +72252007,Congenital hypoplasia of cardiac vein +722919003,Neonatal cardiac failure due to decreased left ventricular output +722930000,Neonatal thrombosis of cerebral venous sinus +723304001,"Microcephaly, seizure, intellectual disability, heart disease syndrome" +723333000,Faciocardiorenal syndrome +723859005,Pulmonary embolism due to and following acute myocardial infarction +723860000,Arrhythmia due to and following acute myocardial infarction +723866006,Idiopathic ventricular fibrillation not Brugada type +723867002,Coarctation of aortic arch +723871004,Acute occlusion of aortoiliac artery due to thrombosis +723872006,Acute occlusion of artery of lower limb due to thrombosis +723874007,Arterial obstruction due to nonthrombotic embolism from heart +724066002,Polysyndactyly and cardiac malformation syndrome +724208006,Keutel syndrome +724435004,Congenital anomaly of descending thoracic aorta +724436003,Congenital anomaly of abdominal aorta +724437007,Compression of trachea and esophagus co-occurrent and due to congenital anomaly of aortic arch +724440007,Atherosclerosis of artery of lower limb +724441006,Non-atherosclerotic chronic arterial occlusive disease +724442004,Dissection of ascending aorta and aortic arch +724550005,Neonatal cardiac failure due to pulmonary overperfusion +726011000,Placement of stent in coronary artery bypass graft +726083008,Congenital sacral meningocele with conotruncal heart defect syndrome +726571000000105,Absent right sided atrioventricular connection with straddling valve +726581000000107,Absent left sided atrioventricular connection with straddling valve +726704006,"Cataract, congenital heart disease, neural tube defect syndrome" +727151000000108,Right superior vena cava connecting to coronary sinus and right sided atrium +727161000000106,Right superior vena cava connecting to coronary sinus and left sided atrium +727221000000107,Left superior vena cava persisting to coronary sinus and right atrium +727801000000102,Congenital pulmonary venous confluence in vertical orientation +727811000000100,Congenital pulmonary venous confluence in horizontal orientation +727821000000106,Congenital pulmonary venous confluence in direct proximity to left atrium +727831000000108,Congenital pulmonary venous confluence remote from left atrium +728371000000102,Divided left atrium with all pulmonary veins to proximal chamber draining to left atrium +728381000000100,Divided left atrium with all pulmonary veins to proximal chamber draining to left atrium with pulmonary venous chamber communication +728391000000103,Divided left atrium with all pulmonary veins to proximal chamber draining to left atrium with pulmonary venous chamber communication to right atrium +728401000000100,Divided left atrium with all pulmonary veins to proximal chamber draining to left atrium with pulmonary venous chamber extracardiac communication +728851000000102,Retro-aortic brachiocephalic vein +728911000000108,Azygos continuation of inferior vena cava to left superior vena cava +72930009,Superficial migratory thrombophlebitis +7305005,Coarctation of aorta +73067008,Ruptured aortic aneurysm +732230001,Dissection of coronary artery +733127007,Acute occlusion of artery of upper limb caused by thrombus +733325006,Combined occlusion by thrombus of retinal artery and retinal vein +733454004,Long thumb brachydactyly syndrome +733491005,Carney complex +734374000,Thrombosis of left carotid artery +734382000,Thrombosis of right carotid artery +734383005,Thrombosis of left middle cerebral artery +734384004,Thrombosis of right middle cerebral artery +734959006,Embolus of left cerebellar artery +734960001,Embolus of right cerebellar artery +734961002,Embolus of left posterior cerebral artery +734963004,Embolus of right posterior cerebral artery +734964005,Embolus of left middle cerebral artery +734965006,Embolus of right middle cerebral artery +735567001,Perforation of pulmonary artery co-occurrent and due to aneurysm of pulmonary artery +735568006,Rupture of pulmonary artery co-occurrent and due to aneurysm of pulmonary artery +735572005,Acute occlusion of artery of upper limb +735573000,Acute aortoiliac occlusion +735574006,Acute occlusion of artery of lower limb +735575007,Perforation of thoracic aorta co-occurrent and due to aneurysm of thoracic aorta +735576008,Perforation of abdominal aorta co-occurrent and due to aneurysm of abdominal aorta +735577004,Perforation of thoracoabdominal aorta co-occurrent and due to aneurysm of thoracoabdominal aorta +736700005,Revision of internal cardiac defibrillator lead using fluoroscopic guidance +736702002,Revision of biventricular permanent pacemaker lead using fluoroscopic guidance +736962007,Bypass of four or more coronary arteries with prosthesis +736963002,Bypass of one coronary artery with prosthesis +736964008,Bypass of three coronary arteries with prosthesis +736965009,Bypass of two coronary arteries with prosthesis +736966005,Aortocoronary artery bypass of four or more coronary arteries with saphenous vein graft +736967001,Aortocoronary artery bypass of one coronary artery with saphenous vein graft +736968006,Aortocoronary artery bypass of three coronary arteries with saphenous vein graft +736969003,Aortocoronary artery bypass of two coronary arteries with saphenous vein graft +736970002,Allograft bypass of four or more coronary arteries +736971003,Allograft bypass of one coronary artery +736972005,Allograft bypass of three coronary arteries +736973000,Allograft bypass of two coronary arteries +73699003,Common arterial trunk and common origin of pulmonary arteries +737011002,Revision of cardiac biventricular implantable cardioverter defibrillator lead using fluoroscopic guidance +737155005,Congenital anomaly of atrioventricular valve +737157002,False aneurysm of aorta due to and following procedure +737158007,Aneurysm of aorta due to and following procedure +73774007,Subacute bacterial endocarditis +7387004,Thrombophlebitis of tibial vein +739024006,Transplanted heart present +739025007,Transplanted heart-lung present +74034002,Isolated dextrocardia +74315008,Pulmonary microemboli +74371005,"Coronary artery bypass with autogenous graft, two grafts" +7438000,Congenital atresia of aorta +74561007,Kommerell's diverticulum +74883004,Thoracic aortic aneurysm without rupture +74908007,Congenital absence of inferior vena cava +75145007,Stricture of aorta +75403004,Cardiac sarcoidosis +75543006,Cerebral embolism +75761004,Infusion of intra-arterial thrombolytic agent with percutaneous transluminal coronary angioplasty +75878002,Abdominal aortic aneurysm without rupture +762250009,Congenital anomaly of great vessel +762252001,Common arterial trunk with aortic dominance +762253006,Common arterial trunk with pulmonary dominance co-occurrent with interrupted aortic arch +762255004,Thrombus of chamber of heart +762256003,Thrombosis of iliac vein +762433009,Tetralogy of Fallot with pulmonary atresia co-occurrent with systemic-to-pulmonary collateral artery +762629007,Occlusion of right middle cerebral artery by embolus +762630002,Occlusion of left middle cerebral artery by embolus +762632005,Occlusion of left cerebellar artery by embolus +762633000,Occlusion of right cerebellar artery by embolus +762651004,Occlusion of right posterior cerebral artery by embolus +762652006,Occlusion of left posterior cerebral artery by embolus +76267008,Pulmonary valve disorder +763279007,"Facial dysmorphism, conductive hearing loss, heart defect syndrome" +763316006,Congenital patent ductus arteriosus aneurysm +763343001,Intraoperative insertion of cardiac pacemaker +763615003,"Aortic arch anomaly, facial dysmorphism, intellectual disability syndrome" +763725002,Percutaneous transluminal angioplasty of coronary artery using drug eluting balloon catheter +763834000,Oro-facial digital syndrome type 12 +763835004,Oro-facial digital syndrome type 13 +764452004,Retinal arterial macroaneurysm with supravalvular pulmonic stenosis +764457005,Cardiac arrhythmia ankyrin-B related +764521002,Encircling double aortic arch +764697003,Verloove Vanhorick Brubakk syndrome +764965000,Familial thoracic aortic aneurysm and aortic dissection +76598006,Thrombosis of penile vein +766751007,Neuhauser anomaly +766881008,"Carney complex, trismus, pseudocamptodactyly syndrome" +767309006,Double aortic arch with dominant left arch and hypoplasia of right arch +767311002,Double aortic arch with dominant right arch and hypoplasia of left arch +76846002,Pulmonary endarteritis +770111009,Thrombophlebitis of dorsal venous arch of foot +770432008,Ectasia of left atrial appendage +771348000,Repair of supravalvar aortic stenosis +77326008,Removal of pacemaker electrode leads without replacement +773587008,"X-linked intellectual disability, cardiomegaly, congestive heart failure syndrome" +773749003,Genitopalatocardiac syndrome +77453006,Revision of permanent cardiac pacemaker device +776416004,"Hyperuricemia, pulmonary hypertension, renal failure, alkalosis syndrome" +77788005,Vasomotor acroparesthesia +77892009,Pulmonary venous thrombosis +77978002,Persistent left superior vena cava +77996006,Induction of arrhythmia by electrical pacing +78069008,Chronic rheumatic pericarditis +781065009,Transposition of inferior vena cava +781159007,Congenital levorotation of heart +78250005,Ectopia cordis +782724001,Multisystemic smooth muscle dysfunction syndrome +783738002,"Heart defect, tongue hamartoma, polysyndactyly syndrome" +78381004,"Heart disease in mother complicating pregnancy, childbirth AND/OR puerperium" +784162006,Implantation of permanent cardiac pacemaker using fluoroscopic guidance +784163001,Implantation of cardiac biventricular permanent pacemaker using fluoroscopic guidance +784266000,History of heart-lung transplant recipient +784353002,"Pulmonary valve agenesis, intact ventricular septum, persistent ductus arteriosus syndrome" +78485007,Acyanotic congenital heart disease +789036001,Rheumatic aortitis +789690008,Malignant lymphomatoid granulomatosis of lung +792844003,Limb pain at rest due to atherosclerosis of artery of lower limb +7931000119101,Anterior choroidal artery thrombosis +79439001,Congenital anomaly of aortic arch +7991000119102,Congenital dilatation of aortic root +8001000119106,Atherosclerosis of aortoiliac bypass graft +80235008,Hepatic artery embolism +80383008,Embolism of iliac artery +80606009,Carotid artery embolism +8072003,"Replacement of pacemaker device with single-chamber device, not specified as rate-responsive" +80762004,"Infusion of intra-arterial thrombolytic agent with percutaneous transluminal coronary angioplasty, multiple vessels" +81220003,Artificial pacemaker rate check +81577001,Congenital anomaly of inferior vena cava +8166000,Thrombophlebitis of basilar sinus +81817003,Atherosclerosis of aorta +8186001,Cardiomegaly +82153002,Miscarriage with pulmonary embolism +82247006,"Coronary artery bypass with autogenous graft, five grafts" +822501000000101,Endoscopic robot assisted coronary artery bypass +82367000,Aneurysmectomy of ascending aorta with anastomosis +82385007,Budd-Chiari syndrome +8239009,Primary endocardial fibroelastosis +824031000000109,Leaking thoracic aortic aneurysm +82453008,Thrombosis of iliac artery +8254003,Endomyocardial disease +82608003,Atrial dilatation +827163002,Early postmyocardial infarction pericarditis +827164008,Delayed postmyocardial infarction pericarditis +83333004,Creation of cardiac pacemaker pocket new site in subcutaneous tissue +83393002,Relocation of automatic implantable cardioverter/defibrillator +83799000,Corrected transposition of great vessels +838364007,Aortic aneurysm due to Loeys-Dietz syndrome +83883001,Cardiovascular syphilis +83916000,Postpartum thrombophlebitis +83938003,Thrombosis of vena cava +83940008,Hepatic artery thrombosis +840306007,Mild pulmonary hypertension +840307003,Moderate pulmonary hypertension +840308008,Severe pulmonary hypertension +840580004,Peripheral arterial disease +840713005,Phlebitis and thrombophlebitis of iliac vein +840961000000108,Thrombosis of stent of renal artery +84183007,"Electronic analysis of internal pacemaker system, complete" +842041000000107,Occlusion of radial artery +842061000000108,Occlusion of brachial artery +842081000000104,Occlusion of ulnar artery +842141000000108,Occlusion of dorsalis pedis artery +84216001,Cerebral venous thrombosis of pregnancy AND/OR puerperium +84272007,Thrombosis of abdominal aorta +842721000000102,Occlusion of anterior tibial artery +842741000000109,Occlusion of posterior tibial artery +85053006,"Percutaneous transluminal coronary angioplasty, multiple vessels" +85081000,Common arterial trunk and widely separate origin of pulmonary arteries +85284003,"Angina, class III" +853611000000106,Laser sheath removal of cardiac pacemaker lead using fluoroscopic guidance +854941000000100,Insertion of permanent biventricular pacemaker lead using fluoroscopic guidance +854951000000102,Insertion of biventricular implantable cardioverter defibrillator lead using fluoroscopic guidance +85503007,Grafting of omentum to myocardium +85898001,Cardiomyopathy +86003009,Carotid artery thrombosis +860680001,Pulmonary embolism due to and following ectopic pregnancy +860681002,Pulmonary embolism due to and following molar pregnancy +860699005,Deep vein thrombosis of lower extremity due to intravenous drug use +86252004,Agenesis of pulmonary artery +864191000000104,Thrombosis of internal jugular vein +864211000000100,Thrombosis of external jugular vein +868227005,Coronary artery bypass grafting using radial artery graft +868228000,Coronary artery bypass grafting using gastroepiploic artery graft +868230003,Coronary artery bypass grafting using free right internal thoracic artery graft +868231004,Coronary artery bypass grafting using free left internal thoracic artery graft +868245005,Percutaneous coronary intervention of left coronary artery +868246006,Percutaneous coronary intervention of anterior descending branch of left coronary artery +868247002,Percutaneous coronary intervention of circumflex branch of left coronary artery +868248007,Percutaneous coronary intervention of right coronary artery +86885004,Repair of pacemaker electrodes +870255009,Cardiac resynchronization therapy +870323006,Obstructed anomalous pulmonary venous pathway +870574002,Adaptive-rate cardiac pacing +870743002,Anastomosis of right internal thoracic artery to coronary artery +870744008,Anastomosis of left internal thoracic artery to coronary artery +871496000,Sequential anastomosis of left internal thoracic artery to coronary artery +871497009,Sequential anastomosis of right internal thoracic artery to coronary artery +871498004,Sequential anastomosis of free right internal thoracic artery to coronary artery +871536000,Aneurysm of pararenal aorta +871578006,Arteriovenous fistula of pulmonary vessels following superior cavopulmonary anastomosis +871580000,Arteriovenous malformation of pulmonary vessels following cavopulmonary anastomosis +871596002,Residual patency of arterial duct following patent ductus arteriosus repair +871614007,Abnormal intrapericardial course of great arteries +871637001,Thrombosis of multiple cerebral veins +871647003,Common arterial trunk with pulmonary dominance +871650000,Common arterial trunk with pulmonary dominance and aortic coarctation +871661008,Aneurysm of aorta at coarctation site following procedure +871662001,Dissection of aorta at coarctation site following procedure +871663006,Disorder of aorta due to and following correction of congenital heart anomaly +871664000,Stenosis of aortic arch following procedure +871665004,Acquired dilatation of ascending aorta and aortic root +871667007,Disorder of ascending aorta due to conotruncal malformation +871669005,Acquired abnormality of aorta due to congenital heart anomaly +871671005,Acquired stenosis of supravalvar area +8722008,Aortic valve disorder +87239004,Popliteal artery thrombosis +87394009,Episodic pulmonary hypertension +88174006,Basilar artery thrombosis +88223008,Secondary pulmonary hypertension +88553002,Removal of cardioverter/defibrillator pulse generator without replacement +8876004,Aortocoronary artery bypass graft with prosthesis +88922007,Thrombosis of basilar sinus +89135007,Thromboarteritis +89297009,Replacement of temporary transvenous pacemaker system +89323001,"Angina, class IV" +89420002,Pulmonary veno-occlusive disease +89511008,Check artificial pacemaker for voltage threshold +89980009,Thrombosis of cavernous venous sinus +90154003,Papillary muscle disorder +90205004,Cardiac revascularization with bypass anastomosis +90383006,Congenital absence of aorta +90453003,Chronic rheumatic mediastinopericarditis +90487008,Aortocoronary bypass of two coronary arteries +90543002,"Replacement of electronic heart device, transvenous electrode" +9058002,Duodenoaortic fistula +906071000000100,Insertion of cardiac single chamber permanent pacemaker using fluoroscopic guidance +9061001,Check artificial pacemaker +90958004,Thrombosis of arteries of lower extremity +9106006,Intraoperative cardiac pacing and mapping +91335003,Mural thrombus of heart +91338001,"Infusion of intra-arterial thrombolytic agent with percutaneous transluminal coronary angioplasty, single vessel" +91592003,Closure of fistula of sinus of Valsalva +93031005,Congenital atresia of inferior vena cava +93033008,Congenital atresia of superior vena cava +93050005,Congenital dilatation of aortic arch +93051009,Congenital dilatation of atrium +93055000,Congenital dilatation of ductus arteriosus +93056004,Congenital dilatation of inferior vena cava +93059006,Congenital dilatation of pulmonary artery +93062009,Congenital dilatation of superior vena cava +93064005,Congenital duplication of aorta +93262004,Congenital hypoplasia of heart +93305002,Congenital malposition of aorta +93318005,Congenital malposition of ductus arteriosus +93328001,Congenital malposition of inferior vena cava +93347003,Congenital malposition of pulmonary artery +93354009,Congenital malposition of superior vena cava +93384001,Congenital stenosis of aortic arch +93388003,Congenital stenosis of subclavian artery +936451000000108,Percutaneous transluminal balloon angioplasty and insertion of drug eluting stent into coronary artery +93778001,Primary malignant neoplasm of endocardium +93914000,Primary malignant neoplasm of myocardium +94278009,Secondary malignant neoplasm of endocardium +94433008,Secondary malignant neoplasm of myocardium +94702005,Multiple congenital cardiac defects +94703000,Multiple intracardiac shunts +95234008,Retroesophageal aortic arch +95236005,Retroesophageal pulmonary artery +95242009,Right-sided pulmonary arterial trunk +95437004,Non-cardiogenic pulmonary edema +95440004,Atrial septal aneurysm +95441000,Pulmonary artery stenosis +95445009,Thrombophlebitis of vena cava +95446005,Thrombosis of mesenteric vein +95447001,Thrombophlebitis of mesenteric vein +95448006,Thrombosis of pelvic vein +95449003,Thrombophlebitis of pelvic vein +95450003,Thrombophlebitis of upper extremities +95451004,Thrombophlebitis of superficial veins of upper extremities +95452006,Thrombophlebitis of deep veins of upper extremities +95455008,Thrombosis of cerebral veins +95459002,Cerebellar artery thrombosis +95461006,Thrombophlebitis of cerebral vein +95579008,Thrombosis of renal artery +95580006,Renal artery embolism +95620003,Thrombophlebitis of the newborn +95838002,Pulmonary cyanosis +978421000000101,Unprovoked deep vein thrombosis +978441000000108,Provoked deep vein thrombosis +985961000000104,Isolated aortitis +998008,Chagas' disease with heart involvement diff --git a/codelists/primis-covid19-vacc-uptake-eth2001.csv b/codelists/primis-covid19-vacc-uptake-eth2001.csv new file mode 100644 index 0000000..4ac72af --- /dev/null +++ b/codelists/primis-covid19-vacc-uptake-eth2001.csv @@ -0,0 +1,83 @@ +code,term,grouping_16_id,grouping_6_id +110761000000106,English - ethnic grouping 2001 census,1,1 +494131000000105,White British - ethnic grouping 2001 census,1,1 +92391000000108,British or mixed British - ethnic grouping 2001 census,1,1 +92541000000108,Scottish - ethnic grouping 2001 census,1,1 +92551000000106,Welsh - ethnic grouping 2001 census,1,1 +92561000000109,Northern Irish - ethnic grouping 2001 census,1,1 +92571000000102,Cornish - ethnic grouping 2001 census,1,1 +93921000000101,Ulster Scots - ethnic grouping 2001 census,1,1 +494161000000100,White Irish - ethnic grouping 2001 census,2,1 +92401000000106,Irish - ethnic grouping 2001 census,2,1 +110401000000103,Turkish - ethnic grouping 2001 census,3,1 +88911000000101,Irish Traveller - ethnic grouping 2001 census,3,1 +88921000000107,Traveller - ethnic grouping 2001 census,3,1 +88931000000109,Gypsy/Romany - ethnic grouping 2001 census,3,1 +88941000000100,Polish - ethnic grouping 2001 census,3,1 +88951000000102,Baltic States (Estonian or Latvian or Lithuanian) - ethnic grouping 2001 census,3,1 +88961000000104,Commonwealth of (Russian) Independent States - ethnic grouping 2001 census,3,1 +88971000000106,Albanian - ethnic grouping 2001 census,3,1 +88981000000108,Serbian - ethnic grouping 2001 census,3,1 +92411000000108,Other White background - ethnic grouping 2001 census,3,1 +92791000000109,Cypriot (part not stated) - ethnic grouping 2001 census,3,1 +93931000000104,Greek - ethnic grouping 2001 census,3,1 +93941000000108,Greek Cypriot - ethnic grouping 2001 census,3,1 +93951000000106,Turkish Cypriot - ethnic grouping 2001 census,3,1 +93961000000109,Italian - ethnic grouping 2001 census,3,1 +93981000000100,Kosovan - ethnic grouping 2001 census,3,1 +93991000000103,Bosnian - ethnic grouping 2001 census,3,1 +94001000000108,Croatian - ethnic grouping 2001 census,3,1 +94011000000105,Other republics which made up the former Yugoslavia - ethnic grouping 2001 census,3,1 +94021000000104,Mixed Irish and other White - ethnic grouping 2001 census,3,1 +94031000000102,Other mixed White - ethnic grouping 2001 census,3,1 +94041000000106,Other White European or European unspecified or Mixed European - ethnic grouping 2001 census,3,1 +94051000000109,Other White or White unspecified - ethnic grouping 2001 census,3,1 +92421000000102,White and Black Caribbean - ethnic grouping 2001 census,4,2 +92431000000100,White and Black African - ethnic grouping 2001 census,5,2 +92441000000109,White and Asian - ethnic grouping 2001 census,6,2 +110771000000104,Black and White - ethnic grouping 2001 census,7,2 +92451000000107,Other Mixed background - ethnic grouping 2001 census,7,2 +92581000000100,Black and Asian - ethnic grouping 2001 census,7,2 +92591000000103,Black and Chinese - ethnic grouping 2001 census,7,2 +92601000000109,Chinese and White - ethnic grouping 2001 census,7,2 +92611000000106,Asian and Chinese - ethnic grouping 2001 census,7,2 +92621000000100,Other Mixed or Mixed unspecified - ethnic grouping 2001 census,7,2 +92631000000103,Mixed Asian - ethnic grouping 2001 census,7,2 +92721000000106,Mixed Black - ethnic grouping 2001 census,7,2 +110751000000108,Indian or British Indian - ethnic grouping 2001 census,8,3 +92461000000105,Pakistani or British Pakistani - ethnic grouping 2001 census,9,3 +92471000000103,Bangladeshi or British Bangladeshi - ethnic grouping 2001 census,10,3 +110781000000102,Sinhalese - ethnic grouping 2001 census,11,3 +86461000000107,Sri Lankan - ethnic grouping 2001 census,11,3 +92481000000101,Other Asian background - ethnic grouping 2001 census,11,3 +92641000000107,Punjabi - ethnic grouping 2001 census,11,3 +92651000000105,Kashmiri - ethnic grouping 2001 census,11,3 +92661000000108,East African Asian - ethnic grouping 2001 census,11,3 +92671000000101,Tamil - ethnic grouping 2001 census,11,3 +92681000000104,British Asian - ethnic grouping 2001 census,11,3 +92691000000102,Caribbean Asian - ethnic grouping 2001 census,11,3 +92701000000102,Other Asian or Asian unspecified - ethnic grouping 2001 census,11,3 +92751000000101,Vietnamese - ethnic grouping 2001 census,11,3 +92761000000103,Japanese - ethnic grouping 2001 census,11,3 +92771000000105,Filipino - ethnic grouping 2001 census,11,3 +92781000000107,Malaysian - ethnic grouping 2001 census,11,3 +107691000000105,Caribbean - ethnic grouping 2001 census,12,4 +92491000000104,African - ethnic grouping 2001 census,13,4 +92711000000100,Somali - ethnic grouping 2001 census,13,4 +92731000000108,Nigerian - ethnic grouping 2001 census,13,4 +110791000000100,Black British - ethnic grouping 2001 census,14,4 +92501000000105,Other Black background - ethnic grouping 2001 census,14,4 +92741000000104,Other Black or Black unspecified - ethnic grouping 2001 census,14,4 +92511000000107,Chinese - ethnic grouping 2001 census,15,5 +89001000000105,Arab - ethnic grouping 2001 census,16,5 +89011000000107,Iranian - ethnic grouping 2001 census,16,5 +89021000000101,South and Central American - ethnic grouping 2001 census,16,5 +92521000000101,Other - ethnic grouping 2001 census,16,5 +94061000000107,North African - ethnic grouping 2001 census,16,5 +94071000000100,"Middle Eastern (excluding Israeli, Iranian and Arab) - ethnic grouping 2001 census",16,5 +94081000000103,Israeli - ethnic grouping 2001 census,16,5 +94091000000101,Kurdish - ethnic grouping 2001 census,16,5 +94101000000109,Moroccan - ethnic grouping 2001 census,16,5 +94111000000106,Latin American - ethnic grouping 2001 census,16,5 +94121000000100,Multi-ethnic islands: Mauritian or Seychellois or Maldivian or St Helena - ethnic grouping 2001 census,16,5 +94151000000105,Any other group - ethnic grouping 2001 census,16,5 diff --git a/codelists/primis-covid19-vacc-uptake-eth_norecord.csv b/codelists/primis-covid19-vacc-uptake-eth_norecord.csv new file mode 100644 index 0000000..2b74fd6 --- /dev/null +++ b/codelists/primis-covid19-vacc-uptake-eth_norecord.csv @@ -0,0 +1,2 @@ +code,term +312861003,Ethnic group not recorded diff --git a/codelists/primis-covid19-vacc-uptake-eth_notgiptref.csv b/codelists/primis-covid19-vacc-uptake-eth_notgiptref.csv new file mode 100644 index 0000000..1e63001 --- /dev/null +++ b/codelists/primis-covid19-vacc-uptake-eth_notgiptref.csv @@ -0,0 +1,2 @@ +code,term +312860002,Ethnic group not given - patient refused diff --git a/codelists/primis-covid19-vacc-uptake-eth_notstated.csv b/codelists/primis-covid19-vacc-uptake-eth_notstated.csv new file mode 100644 index 0000000..3c5a7b7 --- /dev/null +++ b/codelists/primis-covid19-vacc-uptake-eth_notstated.csv @@ -0,0 +1,3 @@ +code,term +415226007,Race not stated +92531000000104,Ethnic category not stated - 2001 census diff --git a/codelists/primis-covid19-vacc-uptake-learndis.csv b/codelists/primis-covid19-vacc-uptake-learndis.csv new file mode 100644 index 0000000..de08c79 --- /dev/null +++ b/codelists/primis-covid19-vacc-uptake-learndis.csv @@ -0,0 +1,442 @@ +code,term +10007009,Coffin-Siris syndrome +1089701000000105,Profound intellectual development disorder without impairment of behaviour +1089711000000107,Profound intellectual development disorder with significant impairment of behaviour +1089721000000101,Profound intellectual development disorder with minimal impairment of behaviour +1089731000000104,Profound intellectual development disorder with impairment of behaviour +1089741000000108,Severe intellectual development disorder without significant impairment of behaviour +1089751000000106,Severe intellectual development disorder with significant impairment of behaviour +1089761000000109,Severe intellectual development disorder with minimal impairment of behaviour +1089771000000102,Severe intellectual development disorder with impairment of behaviour +1089781000000100,Moderate intellectual development disorder without significant impairment of behaviour +1089791000000103,Moderate intellectual development disorder with significant impairment of behaviour +1089811000000102,Moderate intellectual development disorder with minimal impairment of behaviour +1089821000000108,Moderate intellectual development disorder with impairment of behaviour +1089831000000105,Mild intellectual development disorder without significant impairment of behaviour +1089841000000101,Mild intellectual development disorder with significant impairment of behaviour +1089851000000103,Mild intellectual development disorder with minimal impairment of behaviour +1093991000000101,Mild intellectual development disorder with impairment of behaviour +1094001000000106,Intellectual development disorder without significant impairment of behaviour +1094011000000108,Intellectual development disorder with significant impairment of behaviour +1094021000000102,Intellectual development disorder with minimal impairment of behaviour +1094031000000100,Intellectual development disorder with impairment of behaviour +109478007,Kohlschutter's syndrome +110359009,Intellectual disability +1239331000000100,Significant intellectual disability +17827007,Cross syndrome +205615000,Trisomy 21- meiotic nondisjunction +205619006,"Trisomy 13, meiotic nondisjunction" +205620000,Trisomy 13 - mitotic nondisjunction mosaicism +205623003,Trisomy 18 - meiotic nondisjunction +205624009,Trisomy 18 - mitotic nondisjunction mosaicism +21111006,Complete trisomy 13 syndrome +21634003,Borjeson-Forssman-Lehmann syndrome +232059000,Laurence-Moon syndrome +234146006,Hennekam lymphangiectasia-lymphedema syndrome +236529001,"Prune belly syndrome with pulmonic stenosis, mental retardation and deafness" +253176002,Gillespie syndrome +254264002,Partial trisomy 21 in Down's syndrome +254266000,Partial trisomy 18 in Edward's syndrome +254268004,Partial trisomy 13 in Patau's syndrome +31216003,Profound intellectual disability +33982008,Hyperphosphatasemia with intellectual disability +40700009,Severe intellectual disability +41040004,Complete trisomy 21 syndrome +412787009,"Intellectual disability, congenital heart disease, blepharophimosis, blepharoptosis and hypoplastic teeth" +416075005,On learning disability register +422437002,X-linked intellectual disability with marfanoid habitus +432091002,Savant syndrome +508171000000105,Severe learning disability +51500006,Complete trisomy 18 syndrome +5619004,Bardet-Biedl syndrome +57917004,Seckel syndrome +59252009,Cutis laxa-corneal clouding-oligophrenia syndrome +61152003,Moderate intellectual disability +613003,Fragile X syndrome +68618008,Rett's disorder +699297004,Blepharophimosis-intellectual disability syndrome Maat-Kievit-Brunner type +699298009,"Blepharophimosis-mental retardation syndrome, Say-Barber-Biesecker-Young-Simpson type" +699316006,Myhre syndrome +699669001,Renpenning syndrome +702344008,Pitt-Hopkins syndrome +702356009,X-linked intellectual disability-psychosis-macroorchidism syndrome +702412005,X-linked intellectual deficit-dystonia-dysarthria syndrome +702416008,X-linked intellectual disability Snyder type +702441001,Fatal X-linked ataxia with deafness and loss of vision +702816000,Methyl-cytosine phosphate guanine binding protein-2 duplication syndrome +703389002,Calcium/calmodulin-dependent serine protein kinase related intellectual disability +703526007,Progressive epilepsy-intellectual disability syndrome Finnish type +703535000,Mowat-Wilson syndrome +709469005,Periodontitis co-occurrent with Down syndrome +715409005,Trigonocephaly C syndrome +715428003,Skeletal dysplasia with epilepsy and short stature syndrome +715441004,McDonough syndrome +715628009,"Intellectual disability, truncal obesity, retinal dystrophy and micropenis syndrome" +715989002,Congenital cataract with intellectual disability and anal atresia and urinary defect syndrome +716024001,Goniodysgenesis with intellectual disability and short stature syndrome +716089008,Craniofacial digital and genital anomalies syndrome +716096005,Hypospadias and intellectual disability syndrome Goldblatt type +716107009,Early onset parkinsonism and intellectual disability syndrome +716112005,Microcephaly with deafness and intellectual disability syndrome +716191002,Alopecia and intellectual disability syndrome +716334004,Intellectual disability and short stature with hand contracture and genital anomaly syndrome +716706009,Female restricted epilepsy with intellectual disability syndrome +716709002,FRAXE intellectual disability syndrome +716996008,Hypoplasia of corpus callosum and mental retardation with adducted thumbs and spasticity and hydrocephalus syndrome +717157006,Trisomy 10p +717222003,Microphthalmia with ankyloblepharon and intellectual disability syndrome +717223008,X-linked epilepsy with learning disability and behavior disorder syndrome +717763008,Chudley Lowry Hoar syndrome +717822006,Goldberg Shprintzen megacolon syndrome +717887003,Biemond syndrome type 2 +717913006,Blepharonasofacial malformation syndrome +717945001,"Brain anomaly, severe mental retardation, ectodermal dysplasia, skeletal deformity, ear anomaly, kidney dysplasia syndrome" +718226002,Wolf Hirschhorn syndrome +718573009,Achalasia microcephaly syndrome +718577005,X-linked intellectual disability Atkin type +718680001,Oro-facial digital syndrome type 9 +718681002,Oro-facial digital syndrome type 11 +718766002,"Spondyloepiphyseal dysplasia, craniosynostosis, cleft palate, cataract and intellectual disability syndrome" +718845002,X-linked intellectual disability with ataxia and apraxia syndrome +718848000,Fried syndrome +718896000,X-linked recessive intellectual disability and macrocephaly with ciliary dysfunction syndrome +718897009,X-linked intellectual disability Seemanova type +718900002,Syndromic X-linked intellectual disability type 11 +718905007,X-linked intellectual disability Shrimpton type +718908009,X-linked intellectual disability Siderius type +718909001,X-linked intellectual disability Stevenson type +718910006,X-linked intellectual disability Stocco Dos Santos type +718911005,X-linked intellectual disability Stoll type +718912003,X-linked intellectual disability Turner type +718914002,X-linked intellectual disability Van Esch type +719009006,X-linked intellectual disability Wilson type +719010001,X-linked intellectual disability Schimke type +719011002,X-linked intellectual disability Pai type +719012009,X-linked intellectual disability Miles Carpenter type +719013004,X-linked intellectual disability Cilliers type +719016007,X-linked intellectual disability Cantagrel type +719017003,X-linked intellectual disability Armfield type +719018008,X-linked intellectual disability Abidi type +719020006,Pallister W syndrome +719042007,Uveal coloboma with cleft lip and palate and intellectual disability syndrome +719046005,12q14 microdeletion syndrome +719069008,Shprintzen Goldberg craniosynostosis syndrome +719097002,Branchioskeletogenital syndrome +719101006,Carpenter Waziri syndrome +719102004,Congenital cataract with ataxia and deafness syndrome +719136005,X-linked intellectual disability with cerebellar hypoplasia syndrome +719138006,X-linked intellectual disability with cubitus valgus and dysmorphism syndrome +719139003,"X-linked Dandy-Walker malformation with intellectual disability, basal ganglia disease and seizure syndrome" +719140001,X-linked intellectual disability with dysmorphism and cerebral atrophy syndrome +719155005,X-linked intellectual disability and epilepsy with progressive joint contracture and facial dysmorphism syndrome +719156006,X-linked intellectual disability with hypogammaglobulinemia and progressive neurological deterioration syndrome +719157002,X-linked intellectual disability and hypotonia with facial dysmorphism and aggressive behavior syndrome +719160009,Syndromic X-linked intellectual disability type 7 +719161008,Syndromic X-linked intellectual disability due to jumonji at-rich interactive domain 1c mutation +719162001,Radioulnar synostosis with microcephaly and scoliosis syndrome +719202006,Spondyloepiphyseal dysplasia tarda Kohn type +719212004,Smith Fineman Myers syndrome +719378009,Microcephalus with brachydactyly and kyphoscoliosis syndrome +719380003,Microcephalus cardiomyopathy syndrome +719450007,Disorder of sex development with intellectual disability syndrome +719466009,Cleft palate with short stature and vertebral anomaly syndrome +719583002,17q11.2 microduplication syndrome +719599008,19q13.11 microdeletion syndrome +719600006,1p21.3 microdeletion syndrome +719800009,"Deafness, onychodystrophy, osteodystrophy, intellectual disability syndrome" +719808002,Chromosome Xp11.3 microdeletion syndrome +719810000,X-linked intellectual disability with seizure and psoriasis syndrome +719811001,X-linked intellectual disability Cabezas type +719812008,X-linked intellectual disability with plagiocephaly syndrome +719825000,"X-linked intellectual disability, macrocephaly, macroorchidism syndrome" +719826004,X-linked intellectual disability with acromegaly and hyperactivity syndrome +719834005,Wilson Turner syndrome +719842006,Congenital hypoplasia of ulna and intellectual disability syndrome +719909009,Chromosome Xq28 trisomy syndrome +719947004,Craniofacial dysmorphism with coloboma of eye and corpus callosum agenesis syndrome +720401009,Cystic fibrosis with gastritis and megaloblastic anemia syndrome +720468000,Aniridia and intellectual disability syndrome +720501007,Arachnodactyly with abnormal ossification and intellectual disability syndrome +720502000,Arachnodactyly and intellectual disability with facial dysmorphism syndrome +720517001,Ataxia with deafness and intellectual disability syndrome +720573009,Brachymorphism with onychodysplasia and dysphalangism syndrome +720635002,Cerebro-facio-thoracic dysplasia +720639008,"Coloboma, congenital heart disease, ichthyosiform dermatosis, intellectual disability ear anomaly syndrome" +720746006,Contracture with ectodermal dysplasia and orofacial cleft syndrome +720748007,Aural atresia with multiple congenital anomalies and intellectual disability syndrome +720825005,Cystic leukoencephalopathy without megalencephaly +720855003,Cerebrooculonasal syndrome +720954000,Filippi syndrome +720955004,Fine Lubinsky syndrome +720957007,Deafness with skeletal dysplasia and lip granuloma syndrome +720979002,"Alopecia, contracture, dwarfism, intellectual disability syndrome" +720981000,Alopecia and intellectual disability with hypergonadotropic hypogonadism syndrome +720982007,"Alport syndrome, intellectual disability, midface hypoplasia, elliptocytosis syndrome" +721007005,Hair defect with photosensitivity and intellectual disability syndrome +721008000,Hall Riggs syndrome +721017000,Postaxial polydactyly and intellectual disability syndrome +721073008,Short stature with webbed neck and congenital heart disease syndrome +721086004,"Deafness, genital anomaly, metacarpal and metatarsal synostosis syndrome" +721087008,Deafness and intellectual disability Martin Probst type syndrome +721089006,"Dentinogenesis imperfecta, short stature, hearing loss, intellectual disability syndrome" +721146009,"Intellectual disability, epilepsy, bulbous nose syndrome" +721207002,"Seizure, sensorineural deafness, ataxia, intellectual disability, electrolyte imbalance syndrome" +721208007,Ectodermal dysplasia with blindness syndrome +721224008,Holmes Gang syndrome +721841001,Hypogonadism with mitral valve prolapse and intellectual disability syndrome +721843003,"Growth retardation, alopecia, pseudoanodontia, optic atrophy syndrome" +721875000,Juberg Marsidi syndrome +721883006,Radioulnar synostosis with developmental delay and hypotonia syndrome +721973006,"Lipodystrophy, intellectual disability, deafness syndrome" +721974000,Lowry MacLean syndrome +722002002,"Intellectual disability, balding, patella luxation, acromicria syndrome" +722003007,Intellectual disability with cataract and kyphosis syndrome +722031003,Kapur Toriello syndrome +722033000,"Macrocephaly, short stature, paraplegia syndrome" +722035007,"Intellectual disability, enteropathy, deafness, peripheral neuropathy, ichthyosis, keratoderma syndrome" +722037004,"Intellectual disability, epileptic seizures, hypogonadism and hypogenitalism, microcephaly, obesity syndrome" +722055008,Oculopalatocerebral syndrome +722056009,Oculocerebrofacial syndrome Kaufman type +722065002,Okamoto syndrome +722075004,Oro-facial digital syndrome type 10 +722105002,Oro-facial digital syndrome type 5 +722106001,Oro-facial digital syndrome type 8 +722107005,Ossification anomaly with psychomotor developmental delay syndrome +722110003,"Osteogenesis imperfecta, retinopathy, seizures, intellectual disability syndrome" +722111004,"Osteopenia, myopia, hearing loss, intellectual disability, facial dysmorphism syndrome" +722209002,"Spastic paraplegia, intellectual disability, palmoplantar hyperkeratosis syndrome" +722213009,Severe X-linked intellectual disability Gustavson type +722281001,"Agammaglobulinemia, microcephaly, craniosynostosis, severe dermatitis syndrome" +722282008,"Agenesis of corpus callosum, intellectual disability, coloboma, micrognathia syndrome" +722378009,Congenital cataract with deafness and hypogonadism syndrome +722379001,Congenital cataract with hypertrichosis and intellectual disability syndrome +722380003,Congenital cataract with intellectual disability and hypogonadotropic hypogonadism syndrome +722454003,"Intellectual disability, craniofacial dysmorphism, hypogonadism, diabetes mellitus syndrome" +722455002,"Intellectual disability, hypoplastic corpus callosum, preauricular tag syndrome" +722456001,"Intellectual disability, developmental delay, contracture syndrome" +722459008,"Male hypergonadotropic hypogonadism, intellectual disability, skeletal anomaly syndrome" +722477003,Toriello Carey syndrome +722478008,Skeletal dysplasia with intellectual disability syndrome +723304001,"Microcephaly, seizure, intellectual disability, heart disease syndrome" +723332005,Isodicentric chromosome 15 syndrome +723333000,Faciocardiorenal syndrome +723336008,Fallot complex with intellectual disability and growth delay syndrome +723365002,Hypotrichosis and intellectual disability syndrome Lopes type +723403008,"Microbrachycephaly, ptosis, cleft lip syndrome" +723441001,Non-progressive cerebellar ataxia with intellectual disability +723454008,Phosphoribosylpyrophosphate synthetase superactivity +723501008,Renier Gabreels Jasper syndrome +723504000,Ramos Arroyo syndrome +723621000,"Spastic tetraplegia, retinitis pigmentosa, intellectual disability syndrome" +723676007,"Severe intellectual disability, epilepsy, anal anomaly, distal phalangeal hypoplasia syndrome" +723994004,Seizures and intellectual disability due to hydroxylysinuria syndrome +724001005,"Retinitis pigmentosa, intellectual disability, deafness, hypogenitalism syndrome" +724039002,Psychomotor retardation due to S-adenosylhomocysteine hydrolase deficiency +724137002,"Macrocephaly, obesity, mental disability, ocular abnormality syndrome" +724178000,Laryngeal abductor paralysis with intellectual disability syndrome +724207001,Kleefstra syndrome +724228005,Infantile choroidocerebral calcification syndrome +724643004,Transient abnormal myelopoiesis co-occurrent with Down syndrome +724644005,Myeloid leukemia co-occurrent with Down syndrome +725140007,Temple Baraitser syndrome +725163002,"X-linked spasticity, intellectual disability, epilepsy syndrome" +725289009,5-amino-4-imidazole carboxamide ribosiduria +725589005,Bullous dystrophy macular type +725906006,Intellectual disability Buenos Aires type +725908007,Neurofaciodigitorenal syndrome +725912001,X-linked intellectual disability Brooks type +726031001,"Cerebellar ataxia, intellectual disability, optic atrophy, skin abnormalities syndrome" +726621009,Caudal appendage deafness syndrome +726669007,"Central nervous system calcification, deafness, tubular acidosis, anemia syndrome" +726670008,Weaver Williams syndrome +726672000,"Short stature, unique facies, enamel hypoplasia, progressive joint stiffness, high-pitched voice syndrome" +726709001,"Intellectual disability, cataract, calcified pinna, myopathy syndrome" +726727003,X-linked intellectual disability Hedera type +726732002,X-linked intellectual disability Nascimento type +732246009,"X-linked intellectual disability, limb spasticity, retinal dystrophy, diabetes insipidus syndrome" +732251003,"Cortical blindness, intellectual disability, polydactyly syndrome" +732954002,"Osteopenia, intellectual disability, sparse hair syndrome" +732957009,Brachydactyly and preaxial hallux varus syndrome +732958004,Spastic paraplegia with precocious puberty syndrome +732961003,"Branchial dysplasia, intellectual disability, inguinal hernia syndrome" +733031004,"Epilepsy, microcephaly, skeletal dysplasia syndrome" +733032006,Epilepsy telangiectasia syndrome +733049004,"Encephalopathy, intracerebral calcification, retinal degeneration syndrome" +733050004,"Dysmorphism, short stature, deafness, disorder of sex development syndrome" +733062000,Marfanoid habitus with autosomal recessive intellectual disability syndrome +733072002,"Alaninuria, microcephaly, dwarfism, enamel hypoplasia, diabetes mellitus syndrome" +733086003,Pseudoprogeria syndrome +733088002,"Preaxial polydactyly, colobomata, intellectual disability syndrome" +733097003,"Ichthyosis, intellectual disability, dwarfism, renal impairment syndrome" +733110004,Van den Bosch syndrome +733116005,"Aniridia, renal agenesis, psychomotor retardation syndrome" +733117001,"Thumb stiffness, brachydactyly, intellectual disability syndrome" +733194007,Dementia co-occurrent and due to Down syndrome +733417008,"Facial dysmorphism, macrocephaly, myopia, Dandy-Walker malformation syndrome" +733419006,"Metaphyseal dysostosis, intellectual disability, conductive deafness syndrome" +733455003,"Spastic paraplegia, glaucoma, intellectual disability syndrome" +733472005,"Microcephalus, glomerulonephritis, marfanoid habitus syndrome" +733522005,Megalocornea with intellectual disability syndrome +734017008,"Ectodermal dysplasia, intellectual disability, central nervous system malformation syndrome" +734173003,"Skeletal abnormality, cutis laxa, craniostenosis, ambiguous genitalia, retardation, facial abnormality syndrome" +734349003,Alpha-thalassemia intellectual disability syndrome linked to chromosome 16 +763136000,"Charcot-Marie-Tooth disease, deafness, intellectual disability syndrome" +763186006,"Grubben, De Cock, Borghgraef syndrome" +763278004,"Facial dysmorphism, cleft palate, loose skin syndrome" +763320005,Craniofaciofrontodigital syndrome +763344007,"Cerebellar ataxia, intellectual disability, oculomotor apraxia, cerebellar cysts syndrome" +763350002,"Intellectual disability, obesity, brain malformation, facial dysmorphism syndrome" +763353000,Cerebrofacioarticular syndrome +763404001,"Ichthyosis, alopecia, eclabion, ectropion, intellectual disability syndrome" +763615003,"Aortic arch anomaly, facial dysmorphism, intellectual disability syndrome" +763618001,Wiedemann Steiner syndrome +763626009,Intellectual disability due to nutritional deficiency +763665007,Craniodigital syndrome and intellectual disability syndrome +763722004,"Hypotonia, speech impairment, severe cognitive delay syndrome" +763741001,"Intellectual disability, alacrima, achalasia syndrome" +763742008,"Intellectual disability, polydactyly, uncombable hair syndrome" +763743003,"Intellectual disability, spasticity, ectrodactyly syndrome" +763744009,"Intellectual disability, brachydactyly, Pierre Robin syndrome" +763745005,Intellectual disability Wolff type +763773007,Macrocephaly and developmental delay syndrome +763795006,Malan overgrowth syndrome +763797003,Agenesis of corpus callosum and abnormal genitalia syndrome +763837007,Oro-facial digital syndrome type 14 +763861000,"Pachygyria, intellectual disability, epilepsy syndrome" +764455002,"Cognitive impairment, coarse facies, heart defects, obesity, pulmonary involvement, short stature, skeletal dysplasia syndrome" +764732004,"Microcephalus, cerebellar hypoplasia, cardiac conduction defect syndrome" +764861005,Intellectual disability Birk-Barel type +764950001,"Cryptorchidism, arachnodactyly, intellectual disability syndrome" +764959000,"Intellectual disability, myopathy, short stature, endocrine defect syndrome" +765089003,"Focal epilepsy, intellectual disability, cerebro-cerebellar malformation syndrome" +765170001,Sodium voltage-gated channel alpha subunit 8-related epilepsy with encephalopathy +765434008,Human immunodeficiency virus type I enhancer binding protein 2 related intellectual disability +765471005,"X-linked intellectual disability, hypogonadism, ichthyosis, obesity, short stature syndrome" +765758008,Microcephalic primordial dwarfism Montreal type +765761009,"Brachydactyly, mesomelia, intellectual disability, heart defect syndrome" +766753005,Nijmegen breakage syndrome-like disorder +766824003,"Activity dependent neuroprotector homeobox related multiple congenital anomalies, intellectual disability, autism spectrum disorder" +766870005,"Epiphyseal dysplasia, hearing loss, dysmorphism syndrome" +766871009,Diencephalic mesencephalic junction dysplasia +768473009,Purine rich element binding protein A syndrome +768677000,Protein phosphatase 2 regulatory subunit b (b56) delta-related intellectual disability +76880004,Angelman syndrome +768843007,"Tall stature, intellectual disability, facial dysmorphism syndrome" +770404004,Autosomal recessive chorioretinopathy and microcephaly syndrome +770431001,"Early-onset epileptic encephalopathy and intellectual disability due to glutamate receptor, ionotropic, N-methyl-D-aspartate, subunit 2A mutation" +770564004,Microcephalic primordial dwarfism Alazami type +770565003,Microcephalic primordial dwarfism Dauber type +770604006,"X-linked cerebral, cerebellar, coloboma syndrome" +770679002,"Polyneuropathy, intellectual disability, acromicria, premature menopause syndrome" +770719004,3q27.3 microdeletion syndrome +770721009,"Microcephaly, thin corpus callosum, intellectual disability syndrome" +770723007,"Optic atrophy, intellectual disability syndrome" +770725000,Infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly +770750002,"Intellectual disability, seizures, macrocephaly, obesity syndrome" +770751003,"Severe motor and intellectual disabilities, sensorineural deafness, dystonia syndrome" +770755007,"Intellectual disability, seizures, hypotonia, ophthalmologic, skeletal anomalies syndrome" +770756008,2p13.2 microdeletion syndrome +770790004,Developmental delay with autism spectrum disorder and gait instability +770793002,5p13 microduplication syndrome +770794008,11p15.4 microduplication syndrome +770898002,"Autosomal recessive cerebellar ataxia, epilepsy, intellectual disability syndrome due to WW domain containing oxidoreductase deficiency" +770901001,"Autosomal recessive intellectual disability, motor dysfunction, multiple joint contracture syndrome" +770907002,Kagami Ogata syndrome +770941005,"Alopecia, progressive neurological defect, endocrinopathy syndrome" +771074000,"Microcephaly, short stature, intellectual disability, facial dysmorphism syndrome" +771077007,"Intellectual disability, short stature, hypertelorism syndrome" +771148008,"X-linked colobomatous microphthalmia, microcephaly, intellectual disability, short stature syndrome" +771149000,"Hepatic fibrosis, renal cyst, intellectual disability syndrome" +771179007,"Extrasystoles, short stature, hyperpigmentation, microcephaly syndrome" +771262009,Pseudoleprechaunism syndrome Patterson type +771336003,Polymicrogyria with optic nerve hypoplasia +771448004,Autism epilepsy syndrome due to branched chain ketoacid dehydrogenase kinase deficiency +771470001,Jawad syndrome +771472009,Developmental and speech delay due to SRY-box 5 deficiency +771476007,"Autosomal recessive leukoencephalopathy, ischemic stroke, retinitis pigmentosa syndrome" +771477003,15q overgrowth syndrome +771512003,Autism spectrum disorder due to AUTS2 activator of transcription and developmental regulator deficiency +772127009,White Sutton syndrome +772224009,Warburg micro syndrome +772225005,"RAB18, member RAS oncogene family deficiency" +77287004,Borderline intellectual disability +773230003,Cyclin-dependent kinase-like 5 deficiency +773274001,"X-linked intellectual disability, craniofacioskeletal syndrome" +773303005,Spondyloepimetaphyseal dysplasia Genevieve type +773307006,Zechi Ceide syndrome +773329005,CK syndrome +773400009,"Severe feeding difficulties, failure to thrive, microcephaly due to ASXL transcriptional regulator 3 deficiency syndrome" +773404000,Roifman syndrome +773405004,Intellectual disability with strabismus syndrome +773416006,"Intellectual disability, facial dysmorphism, hand anomalies syndrome" +773418007,Xylosyltransferase 1 congenital disorder of glycosylation +773419004,"Severe intellectual disability, short stature, behavioral abnormalities, facial dysmorphism syndrome" +773493002,9q31.1q31.3 microdeletion syndrome +773494008,14q24.1q24.3 microdeletion syndrome +773498006,"Autosomal recessive cerebellar ataxia, epilepsy, intellectual disability syndrome due to TUD deficiency" +773547003,13q12.3 microdeletion syndrome +773548008,"Early-onset epileptic encephalopathy, cortical blindness, intellectual disability, facial dysmorphism syndrome" +773551001,"Severe intellectual disability, poor language, strabismus, grimacing face, long fingers syndrome" +773552008,"Intellectual disability, feeding difficulties, developmental delay, microcephaly syndrome" +773553003,"Hypohidrosis, enamel hypoplasia, palmoplantar keratoderma, intellectual disability syndrome" +773554009,"THO complex 6-related developmental delay, microcephaly, facial dysmorphism syndrome" +773556006,"Short ulna, dysmorphism, hypotonia, intellectual disability syndrome" +773578004,"Spondylocostal dysostosis, hypospadias, intellectual disability syndrome" +773581009,"Intellectual disability, craniofacial dysmorphism, cryptorchidism syndrome" +773583007,"Aphonia, deafness, retinal dystrophy, bifid halluces, intellectual disability syndrome" +773587008,"X-linked intellectual disability, cardiomegaly, congestive heart failure syndrome" +773621003,"Intellectual disability, hypotonia, brachycephaly, pyloric stenosis, cryptorchidism syndrome" +773670004,Distal Xq28 microduplication syndrome +773692000,"Late-onset localized junctional epidermolysis bullosa, intellectual disability syndrome" +773699009,Pitt Hopkins-like syndrome +773735007,Deafness with onychodystrophy syndrome +773769008,"Ataxia, photosensitivity, short stature syndrome" +773772001,Rare non-syndromic intellectual disability +773984007,Piebald trait with neurologic defects syndrome +774068004,"AT-hook DNA binding motif containing 1-related intellectual disability, obstructive sleep apnea, mild dysmorphism syndrome" +774070008,"Fibulin 1-related developmental delay, central nervous system anomaly, syndactyly syndrome" +774102003,"Intellectual disability, obesity, prognathism, eye and skin anomalies syndrome" +774149004,"Severe intellectual disability, progressive postnatal microcephaly, midline stereotypic hand movements syndrome" +774203000,"Intellectual disability, severe speech delay, mild dysmorphism syndrome" +776204008,"Colobomatous microphthalmia, obesity, hypogenitalism, intellectual disability syndrome" +777998000,Temtamy preaxial brachydactyly syndrome +778009001,"Blepharophimosis, intellectual disability syndrome, Verloes type" +778011005,Severe intellectual disability and progressive spastic paraplegia +778025006,Atypical hypotonia cystinuria syndrome +780827006,Synaptic Ras GTPase activating protein 1- related intellectual disability +782676009,Distal trisomy 18q +782723007,"Severe intellectual disability, progressive spastic diplegia syndrome" +782736007,"Intellectual disability, facial dysmorphism syndrome due to SET domain containing 5 haploinsufficiency" +782753000,"Intellectual disability, coarse face, macrocephaly, cerebellar hypotrophy syndrome" +782755007,"Primary microcephaly, mild intellectual disability, young-onset diabetes syndrome" +782757004,"Congenital microcephaly, severe encephalopathy, progressive cerebral atrophy syndrome" +782772000,Congenital muscular dystrophy with intellectual disability and severe epilepsy +782886007,"Infantile spasms, psychomotor retardation, progressive brain atrophy, basal ganglia disease syndrome" +782911008,Hereditary cryohydrocytosis with reduced stomatin +782941005,Richieri Costa-da Silva syndrome +782945001,"Ophthalmoplegia, intellectual disability, lingua scrotalis syndrome" +783005002,"Severe microbrachycephaly, intellectual disability, athetoid cerebral palsy syndrome" +783061008,"Facial dysmorphism, developmental delay, behavioral abnormalities syndrome due to 10p11.21p12.31 microdeletion" +783089006,"Macrocephaly, intellectual disability, autism syndrome" +783174004,Congenital muscular dystrophy with intellectual disability +783619003,Dual specificity tyrosine phosphorylation regulated kinase 1A-related intellectual disability syndrome due to 21q22.13q22.2 microdeletion +783702009,X-linked intellectual disability due to glutamate ionotropic receptor AMPA type subunit 3 mutations +783703004,"White matter hypoplasia, corpus callosum agenesis, intellectual disability syndrome" +785298001,Muscle eye brain disease with bilateral multicystic leukodystrophy +785726009,Hyperekplexia epilepsy syndrome +787093004,"Developmental delay, facial dysmorphism syndrome due to mediator complex subunit 13 like deficiency" +787171006,21q22.11q22.12 microdeletion syndrome +787174003,"Intellectual disability, hyperkinetic movement, truncal ataxia syndrome" +787175002,"Ankyrin 3 related intellectual disability, sleep disturbance syndrome" +788417006,"Alopecia, epilepsy, intellectual disability syndrome Moynahan type" +788584007,Blepharophimosis and mental retardation syndrome +79385002,Lowe syndrome +816067005,"Diabetes, hypogonadism, deafness, intellectual disability syndrome" +838441009,"Mental retardation, adducted thumbs, shuffling gait, aphasia syndrome" +840505007,Down syndrome co-occurrent with leukemoid reaction associated transient neonatal pustulosis +86765009,Mild intellectual disability +889211000000104,Specific learning disability +931001000000105,Significant learning disability +984661000000105,Mild learning disability +984671000000103,Moderate learning disability +984681000000101,Profound learning disability diff --git a/codelists/primis-covid19-vacc-uptake-non_eth2001.csv b/codelists/primis-covid19-vacc-uptake-non_eth2001.csv new file mode 100644 index 0000000..7393992 --- /dev/null +++ b/codelists/primis-covid19-vacc-uptake-non_eth2001.csv @@ -0,0 +1,333 @@ +code,term +10008004,Ewe +10117001,Finns +10292001,Guamians +10432001,Onge +108342005,South Asian AND/OR Australian aborigine +113169009,Armenians +113170005,Aymara +113171009,Coushatta +11794009,Kenyans +12556008,Tamils +13233008,Flathead +1340002,Malays +13440006,Tanganyikans +14045001,Caucasian +14176005,Danes +14470009,Tutsi +1451003,Greeks +14999008,Welsh +15086000,African American +15801006,Kapingas +160531006,Race: West indian +17095009,Norwegians +17789004,Papuans +18167009,Black African +18575005,Oceanian +18583004,Estonians +185984009,White - ethnic group +185988007,Black Caribbean +185989004,"Black, other, non-mixed origin" +185990008,Black British +185993005,Black - other African country +185995003,Black Indian sub-continent +185996002,Black - other Asian +185998001,"Black - other, mixed" +185999009,Other Black - Black/White orig +186000006,Other Black - Black/Asian orig +186001005,Indian (East Indian) +186002003,Pakistani +186003008,Bangladeshi +186019001,"Other ethnic, mixed origin" +186020007,"Other ethnic, Black/White origin" +186021006,"Other ethnic, Asian/White origin" +186022004,"Other ethnic, mixed white origin" +186023009,"Other ethnic, other mixed origin" +186035008,New Zealand ethnic groups +186036009,New Zealand European +186037000,Other European in New Zealand +186039002,New Zealand Maori +186040000,Cook Island Maori +186041001,Niuean +186042008,Tokelauan +186044009,South East Asian +18664001,Xavante +19085009,Saipanese +1919006,Egyptians +19434008,French +20140003,Hawaiians +20291009,Lacandon +20449009,Javanese +21047009,Aleuts +21868006,Madagascans +21993009,Indonesians +22007004,Shoshone +23517005,Polynesians +23534002,Melanesians +23922002,Batutsi +24812003,Mongol +25750005,Admiralty Islanders +25804004,English +26215007,South Asian Aborigine +2688009,Tristan da Cunhans +270460000,Black Caribbean/West India/Guyana +270461001,Black N African/Arab/Iranian +270462008,Black East African Asian/Indo-Caribbean +2720008,Hututu +27301002,Paez +275586009,Black North African +275587000,Black Arab +275588005,Black Iranian +275589002,Black East African Asian +275590006,Black Indo-Caribbean +27683006,Ainu +27700004,Iraqi +28409002,Spaniards +2852001,Bhutanese +28562006,Poles +286009,Czech +28796001,Siamese +28821007,Easter Islanders +29343004,Bulgarian +296841000000102,Yemeni +309643000,Black West Indian +309644006,Black Guyana +312859007,Vietnamese +315236000,White British +315237009,White Irish +315239007,Mixed ethnic census group +315240009,Black - ethnic group +315279003,Other black ethnic group +315280000,Asian - ethnic group +315281001,Other Asian ethnic group +315283003,Irish traveller +315634007,Black Caribbean and White +315635008,Black African and White +31637002,Italians +32045009,Georgians +32513008,Dyaks +32873005,Bloods +33182009,Trukese +3353005,Pueblo +33897005,Chinese +34334001,New Caledonians +35007000,Utes +36329002,Slovak +3698008,Micronesians +372148003,Ethnic group +37474002,Ghanaians +37843006,Fulani +38144004,Athabascans +3818007,Senegalese +38361009,Koreans +38750003,Bororo +39007007,Black Jews +39764005,Bantu +401213008,White Scottish +401214002,Other white British ethnic group +40165009,Buriats +40182006,Gypsies +4073004,Palauans +41076003,Mozambiquans +413464008,African race +413465009,Afro-Caribbean +413466005,Afro-Caucasian +413490006,American Indian or Alaska native +413491005,American Indian race +413581001,Asian or Pacific islander +413582008,Asian race +413600007,Australian aborigine +413655005,"Black, not of hispanic origin" +413773004,Caucasian +413774005,"Caucasian, not of hispanic origin" +414152003,European +414408004,Hispanic +414410002,"Hispanic, black" +414411003,"Hispanic, color unknown" +414413000,"Hispanic, white" +414481008,Indian +414551003,Japanese +414661004,Melanesian +414752008,Mixed racial group +414808009,National surgical quality improvement program defined race unknown +414978006,Oriental +415226007,Race not stated +415229000,Racial group +415794004,Unknown racial group +41798002,Caroline Islanders +42632009,Andamanese +4299001,Marathas +43056000,Cuna +43608005,Australian Aborigines +43890005,Dieguenos +44460002,Turks +445343003,Romanian +45465003,Basques +46110004,Somalis +46723002,Badagas +47250000,Bruneians +47327008,Mexican Indians +48118002,Yapese +48294008,Solomon Islanders +48375000,Seminole +48679001,Bogobos +49202008,Gilbertese +50405005,Senoi +51827000,Oriental Jews +52075006,Congolese +53195006,Kirghiz +53460002,Serbs +55990000,Inca +56056003,Belgians +57405008,Chenchu +57539009,Navaho +58047002,Barundi +59366001,Ibo +59487007,Syrians +59597001,Marshallese +60157000,Ellice Islanders +62598008,Venezuelan Indians +63457007,Maya +6373008,Choco +63732001,New Hebrideans +63736003,Taiwanese +64483007,Indians (Hindi-speaking) +64693008,Hungarian +65776006,Blackfeet +66406004,Huasteco +66920001,Amerind +67165000,Lapps +67439005,Msutu +67931002,Aztec +68486007,Austrians +69865008,Fijian +69983001,Irani +704385002,Punjabi +704386001,Orang asli +704387005,Kadazan +704388000,Melanau +704389008,Murut +704390004,Bajau +704391000,Bidayuh +704392007,Iban +71176007,Pygmies +718131000000106,Nepali +718958002,Roma +718959005,Czech Roma +718960000,Romanian Roma +718961001,Slovak Roma +718962008,Bulgarian Roma +718963003,Hungarian Roma +718964009,Polish Roma +71949006,Chippewa +72201005,Hobe +72248007,Kikuyu +72337002,Brazilian Indians +72809004,Icelanders +733078003,Ukrainian +733446001,Canadian +735001008,Scandinavian +73524008,Caingang +73736004,Maori +74159009,Melanuans +74302004,Apache +75301003,Mapuche +75326007,Labradors +75704009,Toba +76253004,Zulu +76460008,Yanomama +76574004,Swiss +76768002,Filipinos +76775001,Ugandans +76883002,Huichol +7695005,Germans +77502007,Atacamenos +77686000,Kwakiutl +79434006,Quechua +80208004,Portuguese +80528001,Xosa +81035008,Pakistani (Urduspeakers) +8124001,West Africans +81283004,Todas +81403004,Swedes +81560001,Tongan +81653003,Pehuenches +81846005,Naiars +82174001,Shona +83365001,Thais +83584002,Luo +83939006,Irula +85163001,Russians +85371009,Bushmen +85515006,Eskimo +86275006,Samoan +870448005,Khoikhoi +87323008,Nez Percé +88790004,Abyssinians (Amharas) +88839008,Sudanese +88934004,Nigerians +89026003,Alacaluf +90027003,Arabs +90348007,Ghashgai +90822005,Gambians +91066000,Tatars +91191002,Oraons +91488008,New Britons +9158000,Liberians +9533000,Dutch +976571000000100,Ethnic category - 2011 census England and Wales +976591000000101,Ethnic category - 2011 census Northern Ireland +976611000000109,Ethnic category - 2011 census Scotland +976631000000101,White: English or Welsh or Scottish or Northern Irish or British - England and Wales ethnic category 2011 census +976651000000108,White: Irish - England and Wales ethnic category 2011 census +976671000000104,White: Gypsy or Irish Traveller - England and Wales ethnic category 2011 census +976691000000100,White: any other White background - England and Wales ethnic category 2011 census +976711000000103,Mixed multiple ethnic groups: White and Black Caribbean - England and Wales ethnic category 2011 census +976731000000106,Mixed multiple ethnic groups: White and Black African - England and Wales ethnic category 2011 census +976751000000104,Mixed multiple ethnic groups: White and Asian - England and Wales ethnic category 2011 census +976771000000108,Mixed multiple ethnic groups: any other Mixed or multiple ethnic background - England and Wales ethnic category 2011 census +976791000000107,Asian or Asian British: Indian - England and Wales ethnic category 2011 census +976811000000108,Asian or Asian British: Pakistani - England and Wales ethnic category 2011 census +976831000000100,Asian or Asian British: Bangladeshi - England and Wales ethnic category 2011 census +976851000000107,Asian or Asian British: Chinese - England and Wales ethnic category 2011 census +976871000000103,Asian or Asian British: any other Asian background - England and Wales ethnic category 2011 census +976891000000104,Black or African or Caribbean or Black British: African - England and Wales ethnic category 2011 census +976911000000101,Black or African or Caribbean or Black British: Caribbean - England and Wales ethnic category 2011 census +976931000000109,Black or African or Caribbean or Black British: other Black or African or Caribbean background - England and Wales ethnic category 2011 census +976951000000102,Other ethnic group: Arab - England and Wales ethnic category 2011 census +976971000000106,Other ethnic group: any other ethnic group - England and Wales ethnic category 2011 census +977351000000100,White - Northern Ireland ethnic category 2011 census +977371000000109,Irish Traveller - Northern Ireland ethnic category 2011 census +977391000000108,Mixed multiple ethnic groups: White and Black Caribbean - Northern Ireland ethnic category 2011 census +977411000000108,Mixed multiple ethnic groups: White and Black African - Northern Ireland ethnic category 2011 census +977431000000100,Mixed multiple ethnic groups: White and Asian - Northern Ireland ethnic category 2011 census +977551000000106,Mixed multiple ethnic groups: any other Mixed or multiple ethnic background - Northern Ireland ethnic category 2011 census +977591000000103,Asian or Asian British: Indian - Northern Ireland ethnic category 2011 census +977711000000100,Asian or Asian British: Pakistani - Northern Ireland ethnic category 2011 census +977731000000108,Asian or Asian British: Bangladeshi - Northern Ireland ethnic category 2011 census +977751000000101,Asian or Asian British: Chinese - Northern Ireland ethnic category 2011 census +977771000000105,Asian or Asian British: any other Asian background - Northern Ireland ethnic category 2011 census +977791000000109,Black or African or Caribbean or Black British: African - Northern Ireland ethnic category 2011 census +977811000000105,Black or African or Caribbean or Black British: Caribbean - Northern Ireland ethnic category 2011 census +977831000000102,Black or African or Caribbean or Black British: other Black or African or Caribbean background - Northern Ireland ethnic category 2011 census +977851000000109,Other ethnic group: Arab - Northern Ireland ethnic category 2011 census +977871000000100,Other ethnic group: any other ethnic group - Northern Ireland ethnic category 2011 census +977911000000103,White: Scottish - Scotland ethnic category 2011 census +977931000000106,White: other British - Scotland ethnic category 2011 census +977951000000104,White: Irish - Scotland ethnic category 2011 census +977971000000108,White: Gypsy or Irish Traveller - Scotland ethnic category 2011 census +978011000000101,White: Polish - Scotland ethnic category 2011 census +978031000000109,White: any other White ethnic group - Scotland ethnic category 2011 census +978051000000102,Mixed or multiple ethnic groups: any Mixed or multiple ethnic group - Scotland ethnic category 2011 census +978071000000106,"Asian or Asian Scottish or Asian British: Pakistani, Pakistani Scottish or Pakistani British - Scotland ethnic category 2011 census" +978111000000100,"Asian or Asian Scottish or Asian British: Indian, Indian Scottish or Indian British - Scotland ethnic category 2011 census" +978171000000105,"Asian or Asian Scottish or Asian British: Bangladeshi, Bangladeshi Scottish or Bangladeshi British - Scotland ethnic category 2011 census" +978191000000109,Asian or Asian Scottish or Asian British: Chinese - Scotland ethnic category 2011 census +978211000000108,Asian or Asian Scottish or Asian British: any other Asian group - Scotland ethnic category 2011 census +978231000000100,"African: African, African Scottish or African British - Scotland ethnic category 2011 census" +978251000000107,African: any other African - Scotland ethnic category 2011 census +978271000000103,"Caribbean or Black: Caribbean, Caribbean Scottish or Caribbean British - Scotland ethnic category 2011 census" +978341000000102,"Caribbean or Black: Black, Black Scottish or Black British - Scotland ethnic category 2011 census" +978361000000101,Caribbean or Black: any other Black or Caribbean group - Scotland ethnic category 2011 census +978381000000105,"Other ethnic group: Arab, Arab Scottish or Arab British - Scotland ethnic category 2011 census" +978401000000105,Other ethnic group: any other ethnic group - Scotland ethnic category 2011 census diff --git a/codelists/primis-covid19-vacc-uptake-sev_obesity.csv b/codelists/primis-covid19-vacc-uptake-sev_obesity.csv new file mode 100644 index 0000000..cf35f28 --- /dev/null +++ b/codelists/primis-covid19-vacc-uptake-sev_obesity.csv @@ -0,0 +1,4 @@ +code,term +408512008,Body mass index 40+ - severely obese +819948005,Obese class III +914741000000103,Obese class III (body mass index equal to or greater than 40.0) diff --git a/codelists/user-anna-schultze-cancer.csv b/codelists/user-anna-schultze-cancer.csv new file mode 100644 index 0000000..7a2de4f --- /dev/null +++ b/codelists/user-anna-schultze-cancer.csv @@ -0,0 +1,557 @@ +code,term +C00,Malignant neoplasm of lip +C00-C14,"Malignant neoplasms of lip, oral cavity and pharynx" +C00-C75,"Malignant neoplasms, stated or presumed to be primary, of specified sites, except of lymphoid, haematopoietic and related tissue" +C00-C97,Malignant neoplasms +C000,Malignant neoplasm: External upper lip +C001,Malignant neoplasm: External lower lip +C002,"Malignant neoplasm: External lip, unspecified" +C003,"Malignant neoplasm: Upper lip, inner aspect" +C004,"Malignant neoplasm: Lower lip, inner aspect" +C005,"Malignant neoplasm: Lip, unspecified, inner aspect" +C006,Malignant neoplasm: Commissure of lip +C008,Malignant neoplasm: Overlapping lesion of lip +C009,"Malignant neoplasm: Lip, unspecified" +C01,Malignant neoplasm of base of tongue +C02,Malignant neoplasm of other and unspecified parts of tongue +C020,Malignant neoplasm: Dorsal surface of tongue +C021,Malignant neoplasm: Border of tongue +C022,Malignant neoplasm: Ventral surface of tongue +C023,"Malignant neoplasm: Anterior two-thirds of tongue, part unspecified" +C024,Malignant neoplasm: Lingual tonsil +C028,Malignant neoplasm: Overlapping lesion of tongue +C029,"Malignant neoplasm: Tongue, unspecified" +C03,Malignant neoplasm of gum +C030,Malignant neoplasm: Upper gum +C031,Malignant neoplasm: Lower gum +C039,"Malignant neoplasm: Gum, unspecified" +C04,Malignant neoplasm of floor of mouth +C040,Malignant neoplasm: Anterior floor of mouth +C041,Malignant neoplasm: Lateral floor of mouth +C048,Malignant neoplasm: Overlapping lesion of floor of mouth +C049,"Malignant neoplasm: Floor of mouth, unspecified" +C05,Malignant neoplasm of palate +C050,Malignant neoplasm: Hard palate +C051,Malignant neoplasm: Soft palate +C052,Malignant neoplasm: Uvula +C058,Malignant neoplasm: Overlapping lesion of palate +C059,"Malignant neoplasm: Palate, unspecified" +C06,Malignant neoplasm of other and unspecified parts of mouth +C060,Malignant neoplasm: Cheek mucosa +C061,Malignant neoplasm: Vestibule of mouth +C062,Malignant neoplasm: Retromolar area +C068,Malignant neoplasm: Overlapping lesion of other and unspecified parts of mouth +C069,"Malignant neoplasm: Mouth, unspecified" +C07,Malignant neoplasm of parotid gland +C08,Malignant neoplasm of other and unspecified major salivary glands +C080,Malignant neoplasm: Submandibular gland +C081,Malignant neoplasm: Sublingual gland +C088,Malignant neoplasm: Overlapping lesion of major salivary glands +C089,"Malignant neoplasm: Major salivary gland, unspecified" +C09,Malignant neoplasm of tonsil +C090,Malignant neoplasm: Tonsillar fossa +C091,Malignant neoplasm: Tonsillar pillar (anterior)(posterior) +C098,Malignant neoplasm: Overlapping lesion of tonsil +C099,"Malignant neoplasm: Tonsil, unspecified" +C10,Malignant neoplasm of oropharynx +C100,Malignant neoplasm: Vallecula +C101,Malignant neoplasm: Anterior surface of epiglottis +C102,Malignant neoplasm: Lateral wall of oropharynx +C103,Malignant neoplasm: Posterior wall of oropharynx +C104,Malignant neoplasm: Branchial cleft +C108,Malignant neoplasm: Overlapping lesion of oropharynx +C109,"Malignant neoplasm: Oropharynx, unspecified" +C11,Malignant neoplasm of nasopharynx +C110,Malignant neoplasm: Superior wall of nasopharynx +C111,Malignant neoplasm: Posterior wall of nasopharynx +C112,Malignant neoplasm: Lateral wall of nasopharynx +C113,Malignant neoplasm: Anterior wall of nasopharynx +C118,Malignant neoplasm: Overlapping lesion of nasopharynx +C119,"Malignant neoplasm: Nasopharynx, unspecified" +C12,Malignant neoplasm of piriform sinus +C13,Malignant neoplasm of hypopharynx +C130,Malignant neoplasm: Postcricoid region +C131,"Malignant neoplasm: Aryepiglottic fold, hypopharyngeal aspect" +C132,Malignant neoplasm: Posterior wall of hypopharynx +C138,Malignant neoplasm: Overlapping lesion of hypopharynx +C139,"Malignant neoplasm: Hypopharynx, unspecified" +C14,"Malignant neoplasm of other and ill-defined sites in the lip, oral cavity and pharynx" +C140,"Malignant neoplasm: Pharynx, unspecified" +C142,Malignant neoplasm: Waldeyer ring +C148,"Malignant neoplasm: Overlapping lesion of lip, oral cavity and pharynx" +C15,Malignant neoplasm of oesophagus +C15-C26,Malignant neoplasms of digestive organs +C150,Malignant neoplasm: Cervical part of oesophagus +C151,Malignant neoplasm: Thoracic part of oesophagus +C152,Malignant neoplasm: Abdominal part of oesophagus +C153,Malignant neoplasm: Upper third of oesophagus +C154,Malignant neoplasm: Middle third of oesophagus +C155,Malignant neoplasm: Lower third of oesophagus +C158,Malignant neoplasm: Overlapping lesion of oesophagus +C159,"Malignant neoplasm: Oesophagus, unspecified" +C16,Malignant neoplasm of stomach +C160,Malignant neoplasm: Cardia +C161,Malignant neoplasm: Fundus of stomach +C162,Malignant neoplasm: Body of stomach +C163,Malignant neoplasm: Pyloric antrum +C164,Malignant neoplasm: Pylorus +C165,"Malignant neoplasm: Lesser curvature of stomach, unspecified" +C166,"Malignant neoplasm: Greater curvature of stomach, unspecified" +C168,Malignant neoplasm: Overlapping lesion of stomach +C169,"Malignant neoplasm: Stomach, unspecified" +C17,Malignant neoplasm of small intestine +C170,Malignant neoplasm: Duodenum +C171,Malignant neoplasm: Jejunum +C172,Malignant neoplasm: Ileum +C173,Malignant neoplasm: Meckel diverticulum +C178,Malignant neoplasm: Overlapping lesion of small intestine +C179,"Malignant neoplasm: Small intestine, unspecified" +C18,Malignant neoplasm of colon +C180,Malignant neoplasm: Caecum +C181,Malignant neoplasm: Appendix +C182,Malignant neoplasm: Ascending colon +C183,Malignant neoplasm: Hepatic flexure +C184,Malignant neoplasm: Transverse colon +C185,Malignant neoplasm: Splenic flexure +C186,Malignant neoplasm: Descending colon +C187,Malignant neoplasm: Sigmoid colon +C188,Malignant neoplasm: Overlapping lesion of colon +C189,"Malignant neoplasm: Colon, unspecified" +C19,Malignant neoplasm of rectosigmoid junction +C20,Malignant neoplasm of rectum +C21,Malignant neoplasm of anus and anal canal +C210,"Malignant neoplasm: Anus, unspecified" +C211,Malignant neoplasm: Anal canal +C212,Malignant neoplasm: Cloacogenic zone +C218,"Malignant neoplasm: Overlapping lesion of rectum, anus and anal canal" +C22,Malignant neoplasm of liver and intrahepatic bile ducts +C220,Malignant neoplasm: Liver cell carcinoma +C221,Malignant neoplasm: Intrahepatic bile duct carcinoma +C222,Malignant neoplasm: Hepatoblastoma +C223,Malignant neoplasm: Angiosarcoma of liver +C224,Malignant neoplasm: Other sarcomas of liver +C227,Malignant neoplasm: Other specified carcinomas of liver +C229,"Malignant neoplasm: Liver, unspecified" +C23,Malignant neoplasm of gallbladder +C24,Malignant neoplasm of other and unspecified parts of biliary tract +C240,Malignant neoplasm: Extrahepatic bile duct +C241,Malignant neoplasm: Ampulla of Vater +C248,Malignant neoplasm: Overlapping lesion of biliary tract +C249,"Malignant neoplasm: Biliary tract, unspecified" +C25,Malignant neoplasm of pancreas +C250,Malignant neoplasm: Head of pancreas +C251,Malignant neoplasm: Body of pancreas +C252,Malignant neoplasm: Tail of pancreas +C253,Malignant neoplasm: Pancreatic duct +C254,Malignant neoplasm: Endocrine pancreas +C257,Malignant neoplasm: Other parts of pancreas +C258,Malignant neoplasm: Overlapping lesion of pancreas +C259,"Malignant neoplasm: Pancreas, unspecified" +C26,Malignant neoplasm of other and ill-defined digestive organs +C260,"Malignant neoplasm: Intestinal tract, part unspecified" +C261,Malignant neoplasm: Spleen +C268,Malignant neoplasm: Overlapping lesion of digestive system +C269,Malignant neoplasm: Ill-defined sites within the digestive system +C30,Malignant neoplasm of nasal cavity and middle ear +C30-C39,Malignant neoplasms of respiratory and intrathoracic organs +C300,Malignant neoplasm: Nasal cavity +C301,Malignant neoplasm: Middle ear +C31,Malignant neoplasm of accessory sinuses +C310,Malignant neoplasm: Maxillary sinus +C311,Malignant neoplasm: Ethmoidal sinus +C312,Malignant neoplasm: Frontal sinus +C313,Malignant neoplasm: Sphenoidal sinus +C318,Malignant neoplasm: Overlapping lesion of accessory sinuses +C319,"Malignant neoplasm: Accessory sinus, unspecified" +C32,Malignant neoplasm of larynx +C320,Malignant neoplasm: Glottis +C321,Malignant neoplasm: Supraglottis +C322,Malignant neoplasm: Subglottis +C323,Malignant neoplasm: Laryngeal cartilage +C328,Malignant neoplasm: Overlapping lesion of larynx +C329,"Malignant neoplasm: Larynx, unspecified" +C33,Malignant neoplasm of trachea +C34,Malignant neoplasm of bronchus and lung +C340,Malignant neoplasm: Main bronchus +C341,"Malignant neoplasm: Upper lobe, bronchus or lung" +C342,"Malignant neoplasm: Middle lobe, bronchus or lung" +C343,"Malignant neoplasm: Lower lobe, bronchus or lung" +C348,Malignant neoplasm: Overlapping lesion of bronchus and lung +C349,"Malignant neoplasm: Bronchus or lung, unspecified" +C37,Malignant neoplasm of thymus +C38,"Malignant neoplasm of heart, mediastinum and pleura" +C380,Malignant neoplasm: Heart +C381,Malignant neoplasm: Anterior mediastinum +C382,Malignant neoplasm: Posterior mediastinum +C383,"Malignant neoplasm: Mediastinum, part unspecified" +C384,Malignant neoplasm: Pleura +C388,"Malignant neoplasm: Overlapping lesion of heart, mediastinum and pleura" +C39,Malignant neoplasm of other and ill-defined sites in the respiratory system and intrathoracic organs +C390,"Malignant neoplasm: Upper respiratory tract, part unspecified" +C398,Malignant neoplasm: Overlapping lesion of respiratory and intrathoracic organs +C399,Malignant neoplasm: Ill-defined sites within the respiratory system +C40,Malignant neoplasm of bone and articular cartilage of limbs +C40-C41,Malignant neoplasms of bone and articular cartilage +C400,Malignant neoplasm: Scapula and long bones of upper limb +C401,Malignant neoplasm: Short bones of upper limb +C402,Malignant neoplasm: Long bones of lower limb +C403,Malignant neoplasm: Short bones of lower limb +C408,Malignant neoplasm: Overlapping lesion of bone and articular cartilage of limbs +C409,"Malignant neoplasm: Bone and articular cartilage of limb, unspecified" +C41,Malignant neoplasm of bone and articular cartilage of other and unspecified sites +C410,Malignant neoplasm: Bones of skull and face +C411,Malignant neoplasm: Mandible +C412,Malignant neoplasm: Vertebral column +C413,"Malignant neoplasm: Ribs, sternum and clavicle" +C414,"Malignant neoplasm: Pelvic bones, sacrum and coccyx" +C418,Malignant neoplasm: Overlapping lesion of bone and articular cartilage +C419,"Malignant neoplasm: Bone and articular cartilage, unspecified" +C43,Malignant melanoma of skin +C43-C44,Melanoma and other malignant neoplasms of skin +C430,Malignant neoplasm: Malignant melanoma of lip +C431,"Malignant neoplasm: Malignant melanoma of eyelid, including canthus" +C432,Malignant neoplasm: Malignant melanoma of ear and external auricular canal +C433,Malignant neoplasm: Malignant melanoma of other and unspecified parts of face +C434,Malignant neoplasm: Malignant melanoma of scalp and neck +C435,Malignant neoplasm: Malignant melanoma of trunk +C436,"Malignant neoplasm: Malignant melanoma of upper limb, including shoulder" +C437,"Malignant neoplasm: Malignant melanoma of lower limb, including hip" +C438,Malignant neoplasm: Overlapping malignant melanoma of skin +C439,"Malignant neoplasm: Malignant melanoma of skin, unspecified" +C44,Other malignant neoplasms of skin +C440,Malignant neoplasm: Skin of lip +C441,"Malignant neoplasm: Skin of eyelid, including canthus" +C442,Malignant neoplasm: Skin of ear and external auricular canal +C443,Malignant neoplasm: Skin of other and unspecified parts of face +C444,Malignant neoplasm: Skin of scalp and neck +C445,Malignant neoplasm: Skin of trunk +C446,"Malignant neoplasm: Skin of upper limb, including shoulder" +C447,"Malignant neoplasm: Skin of lower limb, including hip" +C448,Malignant neoplasm: Overlapping lesion of skin +C449,"Malignant neoplasm: Malignant neoplasm of skin, unspecified" +C45,Mesothelioma +C45-C49,Malignant neoplasms of mesothelial and soft tissue +C450,Mesothelioma of pleura +C451,Mesothelioma of peritoneum +C452,Mesothelioma of pericardium +C457,Mesothelioma of other sites +C459,"Mesothelioma, unspecified" +C46,Kaposi sarcoma +C460,Kaposi sarcoma of skin +C461,Kaposi sarcoma of soft tissue +C462,Kaposi sarcoma of palate +C463,Kaposi sarcoma of lymph nodes +C467,Kaposi sarcoma of other sites +C468,Kaposi sarcoma of multiple organs +C469,"Kaposi sarcoma, unspecified" +C47,Malignant neoplasm of peripheral nerves and autonomic nervous system +C470,"Malignant neoplasm: Peripheral nerves of head, face and neck" +C471,"Malignant neoplasm: Peripheral nerves of upper limb, including shoulder" +C472,"Malignant neoplasm: Peripheral nerves of lower limb, including hip" +C473,Malignant neoplasm: Peripheral nerves of thorax +C474,Malignant neoplasm: Peripheral nerves of abdomen +C475,Malignant neoplasm: Peripheral nerves of pelvis +C476,"Malignant neoplasm: Peripheral nerves of trunk, unspecified" +C478,Malignant neoplasm: Overlapping lesion of peripheral nerves and autonomic nervous system +C479,"Malignant neoplasm: Peripheral nerves and autonomic nervous system, unspecified" +C48,Malignant neoplasm of retroperitoneum and peritoneum +C480,Malignant neoplasm: Retroperitoneum +C481,Malignant neoplasm: Specified parts of peritoneum +C482,"Malignant neoplasm: Peritoneum, unspecified" +C488,Malignant neoplasm: Overlapping lesion of retroperitoneum and peritoneum +C49,Malignant neoplasm of other connective and soft tissue +C490,"Malignant neoplasm: Connective and soft tissue of head, face and neck" +C491,"Malignant neoplasm: Connective and soft tissue of upper limb, including shoulder" +C492,"Malignant neoplasm: Connective and soft tissue of lower limb, including hip" +C493,Malignant neoplasm: Connective and soft tissue of thorax +C494,Malignant neoplasm: Connective and soft tissue of abdomen +C495,Malignant neoplasm: Connective and soft tissue of pelvis +C496,"Malignant neoplasm: Connective and soft tissue of trunk, unspecified" +C498,Malignant neoplasm: Overlapping lesion of connective and soft tissue +C499,"Malignant neoplasm: Connective and soft tissue, unspecified" +C50,Malignant neoplasm of breast +C50-C50,Malignant neoplasm of breast +C500,Malignant neoplasm: Nipple and areola +C501,Malignant neoplasm: Central portion of breast +C502,Malignant neoplasm: Upper-inner quadrant of breast +C503,Malignant neoplasm: Lower-inner quadrant of breast +C504,Malignant neoplasm: Upper-outer quadrant of breast +C505,Malignant neoplasm: Lower-outer quadrant of breast +C506,Malignant neoplasm: Axillary tail of breast +C508,Malignant neoplasm: Overlapping lesion of breast +C509,"Malignant neoplasm: Breast, unspecified" +C51,Malignant neoplasm of vulva +C51-C58,Malignant neoplasms of female genital organs +C510,Malignant neoplasm: Labium majus +C511,Malignant neoplasm: Labium minus +C512,Malignant neoplasm: Clitoris +C518,Malignant neoplasm: Overlapping lesion of vulva +C519,"Malignant neoplasm: Vulva, unspecified" +C52,Malignant neoplasm of vagina +C53,Malignant neoplasm of cervix uteri +C530,Malignant neoplasm: Endocervix +C531,Malignant neoplasm: Exocervix +C538,Malignant neoplasm: Overlapping lesion of cervix uteri +C539,"Malignant neoplasm: Cervix uteri, unspecified" +C54,Malignant neoplasm of corpus uteri +C540,Malignant neoplasm: Isthmus uteri +C541,Malignant neoplasm: Endometrium +C542,Malignant neoplasm: Myometrium +C543,Malignant neoplasm: Fundus uteri +C548,Malignant neoplasm: Overlapping lesion of corpus uteri +C549,"Malignant neoplasm: Corpus uteri, unspecified" +C55,"Malignant neoplasm of uterus, part unspecified" +C56,Malignant neoplasm of ovary +C57,Malignant neoplasm of other and unspecified female genital organs +C570,Malignant neoplasm: Fallopian tube +C571,Malignant neoplasm: Broad ligament +C572,Malignant neoplasm: Round ligament +C573,Malignant neoplasm: Parametrium +C574,"Malignant neoplasm: Uterine adnexa, unspecified" +C577,Malignant neoplasm: Other specified female genital organs +C578,Malignant neoplasm: Overlapping lesion of female genital organs +C579,"Malignant neoplasm: Female genital organ, unspecified" +C58,Malignant neoplasm of placenta +C60,Malignant neoplasm of penis +C60-C63,Malignant neoplasms of male genital organs +C600,Malignant neoplasm: Prepuce +C601,Malignant neoplasm: Glans penis +C602,Malignant neoplasm: Body of penis +C608,Malignant neoplasm: Overlapping lesion of penis +C609,"Malignant neoplasm: Penis, unspecified" +C61,Malignant neoplasm of prostate +C62,Malignant neoplasm of testis +C620,Malignant neoplasm: Undescended testis +C621,Malignant neoplasm: Descended testis +C629,"Malignant neoplasm: Testis, unspecified" +C63,Malignant neoplasm of other and unspecified male genital organs +C630,Malignant neoplasm: Epididymis +C631,Malignant neoplasm: Spermatic cord +C632,Malignant neoplasm: Scrotum +C637,Malignant neoplasm: Other specified male genital organs +C638,Malignant neoplasm: Overlapping lesion of male genital organs +C639,"Malignant neoplasm: Male genital organ, unspecified" +C64,"Malignant neoplasm of kidney, except renal pelvis" +C64-C68,Malignant neoplasms of urinary tract +C65,Malignant neoplasm of renal pelvis +C66,Malignant neoplasm of ureter +C67,Malignant neoplasm of bladder +C670,Malignant neoplasm: Trigone of bladder +C671,Malignant neoplasm: Dome of bladder +C672,Malignant neoplasm: Lateral wall of bladder +C673,Malignant neoplasm: Anterior wall of bladder +C674,Malignant neoplasm: Posterior wall of bladder +C675,Malignant neoplasm: Bladder neck +C676,Malignant neoplasm: Ureteric orifice +C677,Malignant neoplasm: Urachus +C678,Malignant neoplasm: Overlapping lesion of bladder +C679,"Malignant neoplasm: Bladder, unspecified" +C68,Malignant neoplasm of other and unspecified urinary organs +C680,Malignant neoplasm: Urethra +C681,Malignant neoplasm: Paraurethral gland +C688,Malignant neoplasm: Overlapping lesion of urinary organs +C689,"Malignant neoplasm: Urinary organ, unspecified" +C69,Malignant neoplasm of eye and adnexa +C69-C72,"Malignant neoplasms of eye, brain and other parts of central nervous system" +C690,Malignant neoplasm: Conjunctiva +C691,Malignant neoplasm: Cornea +C692,Malignant neoplasm: Retina +C693,Malignant neoplasm: Choroid +C694,Malignant neoplasm: Ciliary body +C695,Malignant neoplasm: Lacrimal gland and duct +C696,Malignant neoplasm: Orbit +C698,Malignant neoplasm: Overlapping lesion of eye and adnexa +C699,"Malignant neoplasm: Eye, unspecified" +C70,Malignant neoplasm of meninges +C700,Malignant neoplasm: Cerebral meninges +C701,Malignant neoplasm: Spinal meninges +C709,"Malignant neoplasm: Meninges, unspecified" +C71,Malignant neoplasm of brain +C710,"Malignant neoplasm: Cerebrum, except lobes and ventricles" +C711,Malignant neoplasm: Frontal lobe +C712,Malignant neoplasm: Temporal lobe +C713,Malignant neoplasm: Parietal lobe +C714,Malignant neoplasm: Occipital lobe +C715,Malignant neoplasm: Cerebral ventricle +C716,Malignant neoplasm: Cerebellum +C717,Malignant neoplasm: Brain stem +C718,Malignant neoplasm: Overlapping lesion of brain +C719,"Malignant neoplasm: Brain, unspecified" +C72,"Malignant neoplasm of spinal cord, cranial nerves and other parts of central nervous system" +C720,Malignant neoplasm: Spinal cord +C721,Malignant neoplasm: Cauda equina +C722,Malignant neoplasm: Olfactory nerve +C723,Malignant neoplasm: Optic nerve +C724,Malignant neoplasm: Acoustic nerve +C725,Malignant neoplasm: Other and unspecified cranial nerves +C728,Malignant neoplasm: Overlapping lesion of brain and other parts of central nervous system +C729,"Malignant neoplasm: Central nervous system, unspecified" +C73,Malignant neoplasm of thyroid gland +C73-C75,Malignant neoplasms of thyroid and other endocrine glands +C74,Malignant neoplasm of adrenal gland +C740,Malignant neoplasm: Cortex of adrenal gland +C741,Malignant neoplasm: Medulla of adrenal gland +C749,"Malignant neoplasm: Adrenal gland, unspecified" +C75,Malignant neoplasm of other endocrine glands and related structures +C750,Malignant neoplasm: Parathyroid gland +C751,Malignant neoplasm: Pituitary gland +C752,Malignant neoplasm: Craniopharyngeal duct +C753,Malignant neoplasm: Pineal gland +C754,Malignant neoplasm: Carotid body +C755,Malignant neoplasm: Aortic body and other paraganglia +C758,"Malignant neoplasm: Pluriglandular involvement, unspecified" +C759,"Malignant neoplasm: Endocrine gland, unspecified" +C76,Malignant neoplasm of other and ill-defined sites +C76-C80,"Malignant neoplasms of ill-defined, secondary and unspecified sites" +C760,"Malignant neoplasm of other and ill-defined sites: Head, face and neck" +C761,Malignant neoplasm of other and ill-defined sites: Thorax +C762,Malignant neoplasm of other and ill-defined sites: Abdomen +C763,Malignant neoplasm of other and ill-defined sites: Pelvis +C764,Malignant neoplasm of other and ill-defined sites: Upper limb +C765,Malignant neoplasm of other and ill-defined sites: Lower limb +C767,Malignant neoplasm of other and ill-defined sites: Other ill-defined sites +C768,Malignant neoplasm of other and ill-defined sites: Overlapping lesion of other and ill-defined sites +C77,Secondary and unspecified malignant neoplasm of lymph nodes +C770,"Secondary and unspecified malignant neoplasm: Lymph nodes of head, face and neck" +C771,Secondary and unspecified malignant neoplasm: Intrathoracic lymph nodes +C772,Secondary and unspecified malignant neoplasm: Intra-abdominal lymph nodes +C773,Secondary and unspecified malignant neoplasm: Axillary and upper limb lymph nodes +C774,Secondary and unspecified malignant neoplasm: Inguinal and lower limb lymph nodes +C775,Secondary and unspecified malignant neoplasm: Intrapelvic lymph nodes +C778,Secondary and unspecified malignant neoplasm: Lymph nodes of multiple regions +C779,"Secondary and unspecified malignant neoplasm: Lymph node, unspecified" +C78,Secondary malignant neoplasm of respiratory and digestive organs +C780,Secondary malignant neoplasm of lung +C781,Secondary malignant neoplasm of mediastinum +C782,Secondary malignant neoplasm of pleura +C783,Secondary malignant neoplasm of other and unspecified respiratory organs +C784,Secondary malignant neoplasm of small intestine +C785,Secondary malignant neoplasm of large intestine and rectum +C786,Secondary malignant neoplasm of retroperitoneum and peritoneum +C787,Secondary malignant neoplasm of liver and intrahepatic bile duct +C788,Secondary malignant neoplasm of other and unspecified digestive organs +C79,Secondary malignant neoplasm of other and unspecified sites +C790,Secondary malignant neoplasm of kidney and renal pelvis +C791,Secondary malignant neoplasm of bladder and other and unspecified urinary organs +C792,Secondary malignant neoplasm of skin +C793,Secondary malignant neoplasm of brain and cerebral meninges +C794,Secondary malignant neoplasm of other and unspecified parts of nervous system +C795,Secondary malignant neoplasm of bone and bone marrow +C796,Secondary malignant neoplasm of ovary +C797,Secondary malignant neoplasm of adrenal gland +C798,Secondary malignant neoplasm of other specified sites +C799,"Secondary malignant neoplasm, unspecified site" +C80,"Malignant neoplasm, without specification of site" +C800,"Malignant neoplasm, primary site unknown, so stated" +C809,"Malignant neoplasm, primary site unspecified" +C81,Hodgkin lymphoma +C81-C96,"Malignant neoplasms, stated or presumed to be primary, of lymphoid, haematopoietic and related tissue" +C810,Nodular lymphocyte predominant Hodgkin lymphoma +C811,Nodular sclerosis classical Hodgkin lymphoma +C812,Mixed cellularity classical Hodgkin lymphoma +C813,Lymphocyte depleted classical Hodgkin lymphoma +C814,Lymphocyte-rich (classical) Hodgkin lymphoma +C817,Other classical Hodgkin lymphoma +C819,"Hodgkin lymphoma, unspecified" +C82,Follicular lymphoma +C820,Follicular lymphoma grade I +C821,Follicular lymphoma grade II +C822,"Follicular lymphoma grade III, unspecified" +C823,Follicular lymphoma grade IIIa +C824,Follicular lymphoma grade IIIb +C825,Diffuse follicle centre lymphoma +C826,Cutaneous follicle centre lymphoma +C827,Other types of follicular lymphoma +C829,"Follicular lymphoma, unspecified" +C83,Non-follicular lymphoma +C830,Small cell B-cell lymphoma +C831,Mantle cell lymphoma +C833,Diffuse large B-cell lymphoma +C835,Lymphoblastic (diffuse) lymphoma +C837,Burkitt lymphoma +C838,Other non-follicular lymphoma +C839,"Non-follicular (diffuse) lymphoma, unspecified" +C84,Mature T/NK-cell lymphomas +C840,Mycosis fungoides +C841,Sézary disease +C844,"Peripheral T-cell lymphoma, not elsewhere classified" +C845,Other mature T/NK-cell lymphomas +C846,"Anaplastic large cell lymphoma, ALK-positive" +C847,"Anaplastic large cell lymphoma, ALK-negative" +C848,"Cutaneous T-cell lymphoma, unspecified" +C849,"Mature T/NK-cell lymphoma, unspecified" +C85,Other and unspecified types of non-Hodgkin lymphoma +C851,"B-cell lymphoma, unspecified" +C852,Mediastinal (thymic) large B-cell lymphoma +C857,Other specified types of non-Hodgkin lymphoma +C859,"Non-Hodgkin lymphoma, unspecified" +C86,Other specified types of T/NK-cell lymphoma +C860,"Extranodal NK/T-cell lymphoma, nasal type" +C861,Hepatosplenic T-cell lymphoma +C862,Enteropathy-type (intestinal) T-cell lymphoma +C863,Subcutaneous panniculitis-like T-cell lymphoma +C864,Blastic NK-cell lymphoma +C865,Angioimmunoblastic T-cell lymphoma +C866,Primary cutaneous CD30-positive T-cell proliferations +C88,Malignant immunoproliferative diseases +C880,Waldenström macroglobulinaemia +C882,Other heavy chain disease +C883,Immunoproliferative small intestinal disease +C884,Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue [MALT-lyphoma] +C887,Other malignant immunoproliferative diseases +C889,"Malignant immunoproliferative disease, unspecified" +C90,Multiple myeloma and malignant plasma cell neoplasms +C900,Multiple myeloma +C901,Plasma cell leukaemia +C902,Extramedullary plasmacytoma +C903,Solitary plasmacytoma +C91,Lymphoid leukaemia +C910,Acute lymphoblastic leukaemia [ALL] +C911,Chronic lymphocytic leukaemia of B-cell type +C913,Prolymphocytic leukaemia of B-cell type +C914,Hairy-cell leukaemia +C915,Adult T-cell lymphoma/leukaemia [HTLV-1-associated] +C916,Prolymphocytic leukaemia of T-cell type +C917,Other lymphoid leukaemia +C918,Mature B-cell leukaemia Burkitt-type +C919,"Lymphoid leukaemia, unspecified" +C92,Myeloid leukaemia +C920,Acute myeloblastic leukaemia [AML] +C921,"Chronic myeloid leukaemia [CML], BCR/ABL-positive" +C922,"Atypical chronic myeloid leukaemia, BCR/ABL- negative" +C923,Myeloid sarcoma +C924,Acute promyelocytic leukaemia [PML] +C925,Acute myelomonocytic leukaemia +C926,Acute myeloid leukaemia with 11q23-abnormality +C927,Other myeloid leukaemia +C928,Acute myeloid leukaemia with multilineage dysplasia +C929,"Myeloid leukaemia, unspecified" +C93,Monocytic leukaemia +C930,Acute monoblastic/monocytic leukaemia +C931,Chronic myelomonocytic leukaemia +C933,Juvenile myelomonocytic leukaemia +C937,Other monocytic leukaemia +C939,"Monocytic leukaemia, unspecified" +C94,Other leukaemias of specified cell type +C940,Acute erythroid leukaemia +C942,Acute megakaryoblastic leukaemia +C943,Mast cell leukaemia +C944,Acute panmyelosis with myelofibrosis +C946,"Myelodysplastic and myeloproliferative disease, not elsewhere classified" +C947,Other specified leukaemias +C95,Leukaemia of unspecified cell type +C950,Acute leukaemia of unspecified cell type +C951,Chronic leukaemia of unspecified cell type +C957,Other leukaemia of unspecified cell type +C959,"Leukaemia, unspecified" +C96,"Other and unspecified malignant neoplasms of lymphoid, haematopoietic and related tissue" +C960,Multifocal and multisystemic (disseminated) Langerhans-cell histiocytosis [Letterer-Siwe disease] +C962,Malignant mast cell tumour +C964,Sarcoma of dendritic cells (accessory cells) +C965,Multifocal and unisystemic Langerhans-cell histiocytosis +C966,Unifocal Langerhans-cell histiocytosis +C967,"Other specified malignant neoplasms of lymphoid, haematopoietic and related tissue" +C968,Histiocytic sarcoma +C969,"Malignant neoplasm of lymphoid, haematopoietic and related tissue, unspecified" +C97,Malignant neoplasms of independent (primary) multiple sites +C97-C97,Malignant neoplasms of independent (primary) multiple sites diff --git a/codelists/user-candrews-asian.csv b/codelists/user-candrews-asian.csv new file mode 100644 index 0000000..7c07c68 --- /dev/null +++ b/codelists/user-candrews-asian.csv @@ -0,0 +1,43 @@ +code,term +134I.,Race: Bangladeshi +134M.,Race: Pakistani +9S6..,Indian +9S7..,Pakistani +9S8..,Bangladeshi +9SA6.,E Afric Asian &/or Indo-Carib (NMO) +9SA7.,Indian sub-continent (NMO) +9SA8.,Other Asian (NMO) +9T1B.,South East Asian +9T1E.,Other Asian +XE2Ny,E Afric Asian/Indo-Carib (NMO) +XM1SD,East African Asian (NMO) +XM1SE,Indo-Caribbean (NMO) +XaFwz,Asian - ethnic group +XaFx0,Other Asian ethnic group +XaJR2,Indian or British Indian - ethnic category 2001 census +XaJR3,Pakistani or British Pakistani - ethnic category 2001 census +XaJR4,Bangladeshi or British Bangladeshi - ethn categ 2001 census +XaJR5,Other Asian background - ethnic category 2001 census +XaJRO,Punjabi - ethnic category 2001 census +XaJRP,Kashmiri - ethnic category 2001 census +XaJRQ,East African Asian - ethnic category 2001 census +XaJRR,Sri Lankan - ethnic category 2001 census +XaJRS,Tamil - ethnic category 2001 census +XaJRT,Sinhalese - ethnic category 2001 census +XaJRU,British Asian - ethnic category 2001 census +XaJRV,Caribbean Asian - ethnic category 2001 census +XaJRW,Other Asian or Asian unspecified ethnic category 2001 census +XaW95,Nepali +Xactg,Asian/Asian Brit: Indian - Eng+Wales ethnic cat 2011 census +Xacth,Asian/Asian British:Pakistani- Eng+Wales eth cat 2011 census +Xacti,Asian/Asian Brit: Bangladeshi- Eng+Wales eth cat 2011 census +Xactk,Asian/Asian Brit: other Asian- Eng+Wales eth cat 2011 census +Xacuc,Asian or Asian British: Indian - NI ethnic cat 2011 census +Xacui,Asian/Asian British: Pakistani - NI ethnic cat 2011 census +Xacuj,Asian/Asian British: Bangladeshi - NI ethnic cat 2011 census +Xacul,Asian/Asian British: other Asian - NI ethnic cat 2011 census +Xacv0,Asian: Pakistani/Pakistani Scot/Pakistani Brit- Scot 2011 +Xacv2,"Asian: Indian, Indian Scot/Indian Brit- Scotland 2011 census" +Xacv5,"Bangladeshi, Bangladeshi Scot or Bangladeshi Brit- Scot 2011" +XacvG,Asian: other Asian group - Scotland ethnic cat 2011 census +Y9931,Race - Indian diff --git a/codelists/user-candrews-black.csv b/codelists/user-candrews-black.csv new file mode 100644 index 0000000..b766bd2 --- /dev/null +++ b/codelists/user-candrews-black.csv @@ -0,0 +1,51 @@ +code,term +134H.,Race: Afro-Caribbean +134K.,Race: West indian +9S2..,Black Caribbean +9S3..,Black African +9S4..,"Black, other, non-mixed origin" +9S41.,Black British +9S42.,Black Caribbean &/or W.I. &/or Guyana +9S43.,Black N African &/or Arab &/or Iranian +9S44.,Black - other African country +9S45.,Black E Afric Asia &/or Indo-Caribb +9S46.,Black Indian sub-continent +9S47.,Black - other Asian +9S48.,Black Black - other +9SA3.,Caribbean I. &/or W.I. &/or Guyana (NMO) +9SA5.,Other African countries (NMO) +XE2Nt,Black Caribbean/W.I./Guyana +XE2Nu,Black N African/Arab/Iranian +XE2Nv,Black East African Asian/Indo-Caribbean +XE2Nw,Caribbean I./W.I./Guyana (NMO) +XM1S3,Black North African +XM1S4,Black Arab +XM1S5,Black Iranian +XM1S6,Black East African Asian +XM1S7,Black Indo-Caribbean +XM1S8,Caribbean Island (NMO) +XM1S9,West Indian (NMO) +XM1SA,Guyana (NMO) +XaBz7,Black West Indian +XaBz8,Black Guyana +XaFwH,Black - ethnic group +XaFwy,Other black ethnic group +XaJR6,Caribbean - ethnic category 2001 census +XaJR7,African - ethnic category 2001 census +XaJR8,Other Black background - ethnic category 2001 census +XaJRX,Somali - ethnic category 2001 census +XaJRZ,Nigerian - ethnic category 2001 census +XaJRa,Black British - ethnic category 2001 census +XaJRb,Other Black or Black unspecified ethnic category 2001 census +XaJST,North African - ethnic category 2001 census +Xactl,Black/African/Carib/Black Brit: African- Eng+Wales 2011 cens +Xactm,Black/African/Caribbn/Black Brit: Caribbean - Eng+Wales 2011 +Xactn,Black/Afr/Carib/Black Brit: other Black- Eng+Wales 2011 cens +Xacum,Black/Afri/Carib/Black Brit: African- NI eth cat 2011 census +Xacun,Black/Afri/Carib/Black Brit: Caribbean- NI eth cat 2011 cens +Xacuo,Black/Afri/Carib/Black Brit: other - NI eth cat 2011 census +XacvH,African: African/African Scot/African Brit - Scotland 2011 +XacvI,African: any other African - Scotland ethnic cat 2011 census +XacvJ,Carib/Black: Caribbean/Carib Scot/Carib Brit- Scotland 2011 +XacvZ,Carib/Black: Black/Black Scot/Black Brit- Scotland 2011 cens +Xacva,Carib/Black: any other Black/Caribbean grp - Scotland 2011 diff --git a/codelists/user-candrews-full_ethnicity_coded.csv b/codelists/user-candrews-full_ethnicity_coded.csv new file mode 100644 index 0000000..d5ee286 --- /dev/null +++ b/codelists/user-candrews-full_ethnicity_coded.csv @@ -0,0 +1,658 @@ +snomedcode,Ethnicity,Grouping_16,Grouping_6 +10008004,Ewe,13,4 +10117001,Finns,3,1 +1024701000000100,Ethnicity not stated,0,0 +10292001,Guamians,16,5 +1036211000000103,Slovak Roma,3,1 +1036251000000104,Czech Roma,3,1 +1036281000000105,Hungarian Roma,3,1 +1036301000000106,Polish Roma,3,1 +1036321000000102,Romanian Roma,3,1 +1036341000000109,Roma,3,1 +1036361000000105,Bulgarian Roma,3,1 +10432001,Onge,11,3 +107691000000105,Caribbean - ethnic category 2001 census,12,4 +108342005,South Asian AND/OR Australian aborigine,16,5 +110401000000103,Turkish - ethnic category 2001 census,3,1 +110751000000108,Indian or British Indian - ethnic category 2001 census,8,3 +110761000000106,English - ethnic category 2001 census,1,1 +110771000000104,Black and White - ethnic category 2001 census,7,2 +110781000000102,Sinhalese - ethnic category 2001 census,11,3 +110791000000100,Black British - ethnic category 2001 census,14,4 +110831000000107,Hindu - ethnic category 2001 census,0,0 +113169009,Armenians,3,1 +113170005,Aymara,16,5 +113171009,Coushatta,16,5 +11794009,Kenyans,13,4 +12556008,Tamils,11,3 +13233008,Flathead,16,5 +1340002,Malays,11,3 +13440006,Tanganyikans,13,4 +139955009,O/E - ethnic group,0,0 +139960008,O/E - ethnic group NOS,0,0 +14045001,Caucasian,3,1 +14176005,Danes,3,1 +14470009,Tutsi,13,4 +1451003,Greeks,3,1 +14999008,Welsh,1,1 +15086000,African American,14,4 +154159009,Ethnic groups (census),0,0 +154160004,White - ethnic group,1,1 +154161000,White British,1,1 +154162007,White Irish,2,1 +154163002,Other white ethnic group,3,1 +154164008,Black Caribbean,12,4 +154165009,Black African,13,4 +154166005,"Black, other, non-mixed origin",14,4 +154167001,Black British,14,4 +154168006,Black Caribbean &/or W.I. &/or Guyana,12,4 +154169003,Black N African &/or Arab &/or Iranian,14,4 +154170002,Black - other African country,13,4 +154171003,Black E Afric Asia &/or Indo-Caribb,14,4 +154172005,Black Indian sub-continent,14,4 +154173000,Black - other Asian,14,4 +154174006,Black Black - other,14,4 +154175007,"Black - other, mixed",7,2 +154176008,Other Black - Black/White orig,7,2 +154177004,Other Black - Black/Asian orig,7,2 +154178009,Indian,8,3 +154179001,Pakistani,9,3 +154180003,Bangladeshi,10,3 +154181004,Chinese,15,5 +154182006,Other ethnic non-mixed (NMO),16,5 +154183001,Brit. ethnic minor. spec.(NMO),16,5 +154184007,Brit. ethnic minor. unsp (NMO),16,5 +154185008,Caribbean I. &/or W.I. &/or Guyana (NMO),12,4 +154186009,N African Arab &/or Iranian (NMO),16,5 +154187000,Other African countries (NMO),13,4 +154188005,E Afric Asian &/or Indo-Carib (NMO),11,3 +154189002,Indian sub-continent (NMO),8,3 +154190006,Other Asian (NMO),11,3 +154191005,Irish (NMO),2,1 +154192003,Greek &/or Greek Cypriot (NMO),3,1 +154193008,Turkish &/or Turkish Cypriot (NMO),3,1 +154194002,Other European (NMO),3,1 +154195001,Other ethnic NEC (NMO),16,5 +154196000,"Other ethnic, mixed origin",7,2 +154197009,"Other ethnic, Black/White orig",7,2 +154198004,"Other ethnic, Asian/White orig",6,2 +154199007,"Other ethnic, mixed white orig",7,2 +154200005,"Other ethnic, other mixed orig",7,2 +154201009,Black Caribbean and White,4,2 +154202002,Black African and White,5,2 +154203007,Vietnamese,16,5 +154204001,Ethnic group not given - patient refused,0,0 +154205000,Ethnic group not recorded,0,0 +154206004,Other black ethnic group,14,4 +154207008,Other Asian ethnic group,11,3 +154208003,Irish traveller,3,1 +154209006,Other ethnic group,16,5 +154210001,Ethnic groups (census) NOS,0,0 +154211002,Ethnicity and other related nationality data,0,0 +154212009,New Zealand ethnic groups,16,5 +154213004,New Zealand European,3,1 +154214005,Other European in New Zealand,3,1 +154215006,New Zealand Maori,16,5 +154216007,Samoan,16,5 +154217003,Cook Island Maori,16,5 +154218008,Tongan,16,5 +154219000,Niuean,16,5 +154220006,Tokelauan,16,5 +154221005,Fijian,16,5 +154222003,Other Pacific ethnic group,16,5 +154223008,South East Asian,11,3 +154224002,Chinese,15,5 +154225001,Indian,8,3 +154226000,Other Asian,11,3 +154227009,Other New Zealand ethnic group,16,5 +154229007,New Zealand ethnic group NOS,16,5 +15801006,Kapingas,16,5 +160531006,Race: West indian,12,4 +162730000,On examination - ethnic group,0,0 +162731001,On examination - Europeanoid,0,0 +162732008,On examination - Negroid,0,0 +162734009,On examination - Australoid,0,0 +162735005,On examination - ethnic group NOS,0,0 +17095009,Norwegians,3,1 +17789004,Papuans,16,5 +18167009,Black African,13,4 +18575005,Oceanian,16,5 +18583004,Estonians,3,1 +185983003,Ethnic group (1991 census) (United Kingdom),0,0 +185984009,White - ethnic group,3,1 +185985005,White British,1,1 +185986006,White Irish,2,1 +185987002,Other white ethnic group,3,1 +185988007,Black Caribbean,12,4 +185989004,"Black, other, non-mixed origin",14,4 +185990008,Black British,14,4 +185991007,Black Caribbean &/or W.I. &/or Guyana,12,4 +185992000,Black N African &/or Arab &/or Iranian,14,4 +185993005,Black - other African country,13,4 +185994004,Black E Afric Asia &/or Indo-Caribb,14,4 +185995003,Black Indian sub-continent,14,4 +185996002,Black - other Asian,14,4 +185997006,Black Black - other,14,4 +185998001,"Black - other, mixed",7,2 +185999009,Other Black - Black/White orig,7,2 +186000006,Other Black - Black/Asian orig,7,2 +186001005,Indian (East Indian),8,3 +186002003,Pakistani,9,3 +186003008,Bangladeshi,10,3 +186004002,Chinese,15,5 +186005001,Other ethnic non-mixed (NMO),16,5 +186006000,British ethnic minority specified (NMO),16,5 +186007009,British ethnic minority unspecified (NMO),16,5 +186008004,Caribbean I. &/or W.I. &/or Guyana (NMO),12,4 +186009007,N African Arab &/or Iranian (NMO),16,5 +186010002,Other African countries (NMO),13,4 +186011003,E Afric Asian &/or Indo-Carib (NMO),11,3 +186012005,Indian sub-continent (NMO),8,3 +186013000,Other Asian (NMO),11,3 +186014006,Irish (NMO),2,1 +186015007,Greek &/or Greek Cypriot (NMO),3,1 +186016008,Turkish &/or Turkish Cypriot (NMO),3,1 +186017004,Other European (NMO),3,1 +186018009,Other ethnic NEC (NMO),16,5 +186019001,"Other ethnic, mixed origin",7,2 +186020007,"Other ethnic, Black/White origin",4,2 +186021006,"Other ethnic, Asian/White origin",6,2 +186022004,"Other ethnic, mixed white origin",7,2 +186023009,"Other ethnic, other mixed origin",7,2 +186024003,Black Caribbean and White,4,2 +186025002,Black African and White,5,2 +186026001,Vietnamese,16,5 +186027005,Ethnic group not given - patient refused,0,0 +186028000,Ethnic group not recorded,0,0 +186029008,Other black ethnic group,14,4 +186030003,Other Asian ethnic group,11,3 +186031004,Irish traveller,3,1 +186032006,Other ethnic group,16,5 +186033001,Ethnic groups (census) NOS,0,0 +186034007,Ethnicity / related nationality data,0,0 +186035008,New Zealand ethnic groups,16,5 +186036009,New Zealand European,3,1 +186037000,Other European in New Zealand,16,5 +186039002,New Zealand Maori,16,5 +186040000,Cook Island Maori,16,5 +186041001,Niuean,16,5 +186042008,Tokelauan,16,5 +186043003,Other Pacific ethnic group,16,5 +186044009,South East Asian,11,3 +186045005,Indian,8,3 +186046006,Other Asian,11,3 +186047002,Other New Zealand ethnic group,16,5 +186048007,New Zealand ethnic group NOS,16,5 +18664001,Xavante,16,5 +19085009,Saipanese,16,5 +1919006,Egyptians,13,4 +19434008,French,3,1 +20140003,Hawaiians,16,5 +202171000000101,Patient ethnicity unknown,0,0 +20291009,Lacandon,16,5 +20449009,Javanese,11,3 +207971000000101,Patient ethnicity unknown,0,0 +207981000000104,Patient ethnicity unknown,0,0 +21047009,Aleuts,16,5 +21868006,Madagascans,13,4 +21993009,Indonesians,11,3 +22007004,Shoshone,16,5 +23517005,Polynesians,16,5 +23534002,Melanesians,16,5 +23922002,Batutsi,13,4 +24812003,Mongol,11,3 +25750005,Admiralty Islanders,16,5 +25804004,English,1,1 +26215007,South Asian Aborigine,11,3 +2688009,Tristan da Cunhans,11,3 +268914005,On examination - Mongoloid origin,0,0 +270460000,Black Caribbean/West India/Guyana,12,4 +270461001,Black N African/Arab/Iranian,14,4 +270462008,Black East African Asian/Indo-Caribbean,14,4 +270463003,Caribbean I./W.I./Guyana (NMO),12,4 +270464009,N African Arab/Iranian (NMO),16,5 +270465005,E Afric Asian/Indo-Carib (NMO),11,3 +270466006,Greek/Greek Cypriot (NMO),3,1 +270467002,Turkish/Turkish Cypriot (NMO),3,1 +2720008,Hututu,13,4 +27301002,Paez,16,5 +275586009,Black North African,13,4 +275587000,Black Arab,14,4 +275588005,Black Iranian,14,4 +275589002,Black East African Asian,14,4 +275590006,Black Indo-Caribbean,14,4 +275591005,Caribbean Island (NMO),12,4 +275592003,West Indian (NMO),12,4 +275593008,Guyana (NMO),12,4 +275594002,North African Arab (NMO),16,5 +275595001,Iranian (NMO),16,5 +275596000,East African Asian (NMO),11,3 +275597009,Indo-Caribbean (NMO),11,3 +275599007,Greek (NMO),3,1 +275600005,Greek Cypriot (NMO),3,1 +275601009,Turkish (NMO),3,1 +275602002,Turkish Cypriot (NMO),3,1 +27683006,Ainu,11,3 +27700004,Iraqi,16,5 +28409002,Spaniards,3,1 +2852001,Bhutanese,11,3 +28562006,Poles,3,1 +286009,Czech,3,1 +28796001,Siamese,11,3 +28821007,Easter Islanders,16,5 +29343004,Bulgarian,3,1 +296841000000102,Yemeni,16,5 +309643000,Black West Indian,12,4 +309644006,Black Guyana,12,4 +312859007,Vietnamese,16,5 +312860002,Ethnic group not given - patient refused,0,0 +312861003,Ethnic group not recorded,0,0 +315236000,White British,1,1 +315237009,White Irish,2,1 +315238004,Other white ethnic group,3,1 +315239007,Mixed ethnic census group,7,2 +315240009,Black - ethnic group,14,4 +315279003,Other black ethnic group,14,4 +315280000,Asian - ethnic group,11,3 +315281001,Other Asian ethnic group,11,3 +315282008,Other ethnic group,16,5 +315283003,Irish traveller,3,1 +315634007,Black Caribbean and White,4,2 +315635008,Black African and White,5,2 +31637002,Italians,3,1 +32045009,Georgians,3,1 +32513008,Dyaks,11,3 +32873005,Bloods,16,5 +33182009,Trukese,16,5 +3353005,Pueblo,16,5 +33897005,Chinese,15,5 +34334001,New Caledonians,16,5 +35007000,Utes,16,5 +354441000000105,Ethnicity - National Public Health Classification,0,0 +36329002,Slovak,3,1 +364699009,Ethnic group,0,0 +365455004,Ethnic groups (1991 census) (United Kingdom),0,0 +365456003,Finding of ethnicity / related nationality data,0,0 +367505005,Caucasian (living organism),3,1 +3698008,Micronesians,16,5 +372148003,Ethnic group,0,0 +37474002,Ghanaians,13,4 +37843006,Fulani,13,4 +38144004,Athabascans,16,5 +3818007,Senegalese,13,4 +38361009,Koreans,16,5 +38750003,Bororo,16,5 +39007007,Black Jews,0,0 +393199009,Gypsies,3,1 +394149000,Gypsies,3,1 +394635008,Gypsies,3,1 +397607002,"Perioperative plan of care consistent with patient value system, lifestyle, ethnicity, and culture",0,0 +39764005,Bantu,13,4 +397731000,Ethnic group finding,0,0 +398089004,Ethnic background,0,0 +401213008,White Scottish,1,1 +401214002,Other white British ethnic group,1,1 +40165009,Buriats,11,3 +40182006,Gypsies,3,1 +4073004,Palauans,16,5 +41076003,Mozambiquans,13,4 +41121000000107,Other white British ethnic group,1,1 +413465009,Afro-Caribbean,12,4 +413466005,Afro-Caucasian,5,2 +413569000,Arab,16,5 +414152003,European,3,1 +414551003,Japanese,11,3 +414661004,Melanesian,16,5 +414978006,Oriental,11,3 +41798002,Caroline Islanders,16,5 +42632009,Andamanese,11,3 +4299001,Marathas,11,3 +43056000,Cuna,16,5 +43481000000100,Other white British ethnic group,1,1 +43608005,Australian Aborigines,16,5 +43890005,Dieguenos,16,5 +443225003,Ethnicity of caregiver,0,0 +44460002,Turks,11,3 +445343003,Romanian,3,1 +44881000000100,White Scottish,1,1 +44891000000103,Other white British ethnic group,1,1 +45465003,Basques,3,1 +46110004,Somalis,13,4 +46723002,Badagas,11,3 +47250000,Bruneians,11,3 +47327008,Mexican Indians,16,5 +48118002,Yapese,16,5 +48294008,Solomon Islanders,16,5 +48375000,Seminole,16,5 +48393004,Ethnic group finding,0,0 +48679001,Bogobos,11,3 +49202008,Gilbertese,16,5 +494131000000105,White British - ethnic category 2001 census,1,1 +494161000000100,White Irish - ethnic category 2001 census,2,1 +503391000000104,Ethnicity of carer,0,0 +503401000000101,Ethnicity of carer,0,0 +503411000000104,Ethnicity of carer,0,0 +50405005,Senoi,16,5 +51750002,Hottentot,13,4 +51827000,Oriental Jews,0,0 +518701000000103,Romanian,3,1 +518721000000107,Bulgarian,3,1 +519681000000108,Czech,3,1 +52075006,Congolese,13,4 +53195006,Kirghiz,11,3 +53460002,Serbs,3,1 +55990000,Inca,16,5 +56056003,Belgians,3,1 +57405008,Chenchu,11,3 +57539009,Navaho,16,5 +58047002,Barundi,13,4 +583481000000105,Other ethnic NEC (NMO),16,5 +583491000000107,Ethnic groups (census) NOS,0,0 +591311000000105,On examination - ethnic group NOS,0,0 +592491000000104,Other New Zealand ethnic group,16,5 +592501000000105,New Zealand ethnic group NOS,16,5 +59366001,Ibo,13,4 +59487007,Syrians,16,5 +59597001,Marshallese,16,5 +60157000,Ellice Islanders,16,5 +62598008,Venezuelan Indians,16,5 +63457007,Maya,16,5 +6373008,Choco,16,5 +63732001,New Hebrideans,16,5 +63736003,Taiwanese,11,3 +64483007,Indians (Hindi-speaking),8,3 +64693008,Hungarian,3,1 +651601000000100,Black Black - other,14,4 +65776006,Blackfeet,16,5 +661731000000107,Other Pacific ethnic group,16,5 +661741000000103,Other Asian,11,3 +66406004,Huasteco,16,5 +666871000000107,Other ethnic group,16,5 +668681000000107,Other white ethnic group,3,1 +66920001,Amerind,16,5 +67165000,Lapps,11,3 +67439005,Msutu,13,4 +67931002,Aztec,16,5 +68486007,Austrians,3,1 +69865008,Fijian,16,5 +69983001,Irani,16,5 +704385002,Punjabi,11,3 +704386001,Orang asli,11,3 +704387005,Kadazan,11,3 +704388000,Melanau,11,3 +704389008,Murut,11,3 +704390004,Bajau,11,3 +704391000,Bidayuh,11,3 +704392007,Iban,11,3 +710011000000101,Slovak,3,1 +71176007,Pygmies,13,4 +718021000000105,Portuguese,3,1 +718131000000106,Nepali,11,3 +718958002,Roma,3,1 +718959005,Czech Roma,3,1 +718960000,Romanian Roma,3,1 +718961001,Slovak Roma,3,1 +718962008,Bulgarian Roma,3,1 +718963003,Hungarian Roma,3,1 +718964009,Polish Roma,3,1 +71949006,Chippewa,16,5 +72201005,Hobe,13,4 +72248007,Kikuyu,13,4 +72337002,Brazilian Indians,16,5 +723621000000103,Ethnicity,0,0 +72809004,Icelanders,3,1 +728721000000100,Carer from Black and minority ethnic group,0,0 +728731000000103,Carer from Black and Minority Ethnic group,0,0 +733078003,Ukrainian,3,1 +733446001,Canadian,3,1 +735001008,Scandinavian,3,1 +73524008,Caingang,16,5 +73736004,Maori,16,5 +74159009,Melanuans,16,5 +74302004,Apache,16,5 +75301003,Mapuche,16,5 +75326007,Labradors,16,5 +75704009,Toba,16,5 +76253004,Zulu,13,4 +763726001,Refusal by patient to provide information about ethnic group,0,0 +76460008,Yanomama,16,5 +76574004,Swiss,3,1 +76768002,Filipinos,11,3 +76775001,Ugandans,13,4 +76883002,Huichol,16,5 +7695005,Germans,3,1 +77502007,Atacamenos,16,5 +77686000,Kwakiutl,16,5 +77711000000105,Other white British ethnic group,1,1 +79434006,Quechua,16,5 +80208004,Portuguese,3,1 +80528001,Xosa,13,4 +81035008,Pakistani (Urduspeakers),9,3 +8124001,West Africans,13,4 +81283004,Todas,11,3 +81403004,Swedes,3,1 +81560001,Tongan,16,5 +81653003,Pehuenches,16,5 +81846005,Naiars,11,3 +82121000000108,Other white British ethnic group,1,1 +82174001,Shona,13,4 +83365001,Thais,11,3 +83584002,Luo,13,4 +83939006,Irula,11,3 +85163001,Russians,3,1 +85371009,Bushmen,13,4 +85515006,Eskimo,16,5 +86275006,Samoan,16,5 +86461000000107,Sri Lankan - ethnic category 2001 census,11,3 +870448005,Khoikhoi,13,4 +87323008,Nez Percé,16,5 +88790004,Abyssinians (Amharas),13,4 +88839008,Sudanese,13,4 +88911000000101,Irish Traveller - ethnic category 2001 census,3,1 +88921000000107,Traveller - ethnic category 2001 census,3,1 +88931000000109,Gypsy/Romany - ethnic category 2001 census,3,1 +88934004,Nigerians,13,4 +88941000000100,Polish - ethnic category 2001 census,3,1 +88951000000102,Baltic States (Estonian or Latvian or Lithuanian) - ethnic category 2001 census,3,1 +88961000000104,Commonwealth of (Russian) Independent States - ethnic category 2001 census,3,1 +88971000000106,Albanian - ethnic category 2001 census,3,1 +88981000000108,Serbian - ethnic category 2001 census,3,1 +88991000000105,Jewish - ethnic category 2001 census,0,0 +89001000000105,Arab - ethnic category 2001 census,16,5 +89011000000107,Iranian - ethnic category 2001 census,16,5 +89021000000101,South and Central American - ethnic category 2001 census,16,5 +89026003,Alacaluf,16,5 +89031000000104,Muslim - ethnic category 2001 census,0,0 +90027003,Arabs,16,5 +90348007,Ghashgai,11,3 +90822005,Gambians,13,4 +91066000,Tatars,11,3 +91191002,Oraons,11,3 +91488008,New Britons,16,5 +9158000,Liberians,13,4 +92381000000106,Ethnic category - 2001 census,0,0 +92391000000108,British or mixed British - ethnic category 2001 census,1,1 +92401000000106,Irish - ethnic category 2001 census,2,1 +92411000000108,Other White background - ethnic category 2001 census,3,1 +92421000000102,White and Black Caribbean - ethnic category 2001 census,4,2 +92431000000100,White and Black African - ethnic category 2001 census,5,2 +92441000000109,White and Asian - ethnic category 2001 census,6,2 +92451000000107,Other Mixed background - ethnic category 2001 census,7,2 +92461000000105,Pakistani or British Pakistani - ethnic category 2001 census,9,3 +92471000000103,Bangladeshi or British Bangladeshi - ethnic category 2001 census,10,3 +92481000000101,Other Asian background - ethnic category 2001 census,11,3 +92491000000104,African - ethnic category 2001 census,13,4 +92501000000105,Other Black background - ethnic category 2001 census,14,4 +92511000000107,Chinese - ethnic category 2001 census,15,5 +92521000000101,Other - ethnic category 2001 census,16,5 +92531000000104,Ethnic category not stated - 2001 census,0,0 +92541000000108,Scottish - ethnic category 2001 census,1,1 +92551000000106,Welsh - ethnic category 2001 census,1,1 +92561000000109,Northern Irish - ethnic category 2001 census,1,1 +92571000000102,Cornish - ethnic category 2001 census,1,1 +92581000000100,Black and Asian - ethnic category 2001 census,7,2 +92591000000103,Black and Chinese - ethnic category 2001 census,7,2 +92601000000109,Chinese and White - ethnic category 2001 census,7,2 +92611000000106,Asian and Chinese - ethnic category 2001 census,7,2 +92621000000100,Other Mixed or Mixed unspecified - ethnic category 2001 census,7,2 +92631000000103,Mixed Asian - ethnic category 2001 census,7,2 +92641000000107,Punjabi - ethnic category 2001 census,8,3 +92651000000105,Kashmiri - ethnic category 2001 census,11,3 +92661000000108,East African Asian - ethnic category 2001 census,11,3 +92671000000101,Tamil - ethnic category 2001 census,11,3 +92681000000104,British Asian - ethnic category 2001 census,11,3 +92691000000102,Caribbean Asian - ethnic category 2001 census,11,3 +92701000000102,Other Asian or Asian unspecified - ethnic category 2001 census,11,3 +92711000000100,Somali - ethnic category 2001 census,13,4 +92721000000106,Mixed Black - ethnic category 2001 census,7,2 +92731000000108,Nigerian - ethnic category 2001 census,13,4 +92741000000104,Other Black or Black unspecified - ethnic category 2001 census,14,4 +92751000000101,Vietnamese - ethnic category 2001 census,11,3 +92761000000103,Japanese - ethnic category 2001 census,11,3 +92771000000105,Filipino - ethnic category 2001 census,11,3 +92781000000107,Malaysian - ethnic category 2001 census,11,3 +92791000000109,Cypriot (part not stated) - ethnic category 2001 census,3,1 +93921000000101,Ulster Scots - ethnic category 2001 census,3,1 +93931000000104,Greek - ethnic category 2001 census,3,1 +93941000000108,Greek Cypriot - ethnic category 2001 census,3,1 +93951000000106,Turkish Cypriot - ethnic category 2001 census,3,1 +93961000000109,Italian - ethnic category 2001 census,3,1 +93981000000100,Kosovan - ethnic category 2001 census,3,1 +93991000000103,Bosnian - ethnic category 2001 census,3,1 +94001000000108,Croatian - ethnic category 2001 census,3,1 +94011000000105,Other republics which made up the former Yugoslavia - ethnic category 2001 census,3,1 +94021000000104,Mixed Irish and other White - ethnic category 2001 census,3,1 +94031000000102,Other mixed White - ethnic category 2001 census,3,1 +94041000000106,Other White European or European unspecified or Mixed European - ethnic category 2001 census,3,1 +94051000000109,Other White or White unspecified - ethnic category 2001 census,3,1 +94061000000107,North African - ethnic category 2001 census,13,4 +94071000000100,"Middle Eastern (excluding Israeli, Iranian and Arab) - ethnic category 2001 census",16,5 +94081000000103,Israeli - ethnic category 2001 census,16,5 +94091000000101,Kurdish - ethnic category 2001 census,16,5 +94101000000109,Moroccan - ethnic category 2001 census,16,5 +94111000000106,Latin American - ethnic category 2001 census,16,5 +94121000000100,Multi-ethnic islands: Mauritian or Seychellois or Maldivian or St Helena - ethnic category 2001 census,16,5 +94131000000103,Buddhist - ethnic category 2001 census,0,0 +94141000000107,Sikh - ethnic category 2001 census,0,0 +94151000000105,Any other group - ethnic category 2001 census,16,5 +9533000,Dutch,3,1 +976551000000109,Ethnic category - 2011 census,0,0 +976571000000100,Ethnic category - 2011 census England and Wales,0,0 +976591000000101,Ethnic category - 2011 census Northern Ireland,0,0 +976611000000109,Ethnic category - 2011 census Scotland,0,0 +976631000000101,White: English or Welsh or Scottish or Northern Irish or British - England and Wales ethnic category 2011 census,1,1 +976651000000108,White: Irish - England and Wales ethnic category 2011 census,2,1 +976671000000104,White: Gypsy or Irish Traveller - England and Wales ethnic category 2011 census,3,1 +976691000000100,White: any other White background - England and Wales ethnic category 2011 census,3,1 +976711000000103,Mixed multiple ethnic groups: White and Black Caribbean - England and Wales ethnic category 2011 census,4,2 +976721000000109,Mixed multiple ethnic groups: white and black Caribbean - England and Wales ethnic category 2011 census,4,2 +976731000000106,Mixed multiple ethnic groups: White and Black African - England and Wales ethnic category 2011 census,5,2 +976741000000102,Mixed multiple ethnic groups: white and black African - England and Wales ethnic category 2011 census,5,2 +976751000000104,Mixed multiple ethnic groups: White and Asian - England and Wales ethnic category 2011 census,6,2 +976761000000101,Mixed multiple ethnic groups: white and Asian - England and Wales ethnic category 2011 census,6,2 +976771000000108,Mixed multiple ethnic groups: any other Mixed or multiple ethnic background - England and Wales ethnic category 2011 census,7,2 +976781000000105,Mixed multiple ethnic groups: any other Mixed or Multiple ethnic background - England and Wales ethnic category 2011 census,7,2 +976791000000107,Asian or Asian British: Indian - England and Wales ethnic category 2011 census,8,3 +976811000000108,Asian or Asian British: Pakistani - England and Wales ethnic category 2011 census,9,3 +976831000000100,Asian or Asian British: Bangladeshi - England and Wales ethnic category 2011 census,10,3 +976851000000107,Asian or Asian British: Chinese - England and Wales ethnic category 2011 census,15,5 +976871000000103,Asian or Asian British: any other Asian background - England and Wales ethnic category 2011 census,11,3 +976891000000104,Black or African or Caribbean or Black British: African - England and Wales ethnic category 2011 census,13,4 +976911000000101,Black or African or Caribbean or Black British: Caribbean - England and Wales ethnic category 2011 census,12,4 +976931000000109,Black or African or Caribbean or Black British: other Black or African or Caribbean background - England and Wales ethnic category 2011 census,14,4 +976951000000102,Other ethnic group: Arab - England and Wales ethnic category 2011 census,16,5 +976961000000104,Other ethnic group: Arab - England and Wales ethnic category 2011 census,16,5 +976971000000106,Other ethnic group: any other ethnic group - England and Wales ethnic category 2011 census,16,5 +976981000000108,Other ethnic group: any other ethnic group - England and Wales ethnic category 2011 census,16,5 +977351000000100,White - Northern Ireland ethnic category 2011 census,3,1 +977371000000109,Irish Traveller - Northern Ireland ethnic category 2011 census,3,1 +977391000000108,Mixed multiple ethnic groups: White and Black Caribbean - Northern Ireland ethnic category 2011 census,4,2 +977401000000106,Mixed multiple ethnic groups: white and black Caribbean - Northern Ireland ethnic category 2011 census,4,2 +977411000000108,Mixed multiple ethnic groups: White and Black African - Northern Ireland ethnic category 2011 census,5,2 +977421000000102,Mixed multiple ethnic groups: white and black African - Northern Ireland ethnic category 2011 census,5,2 +977431000000100,Mixed multiple ethnic groups: White and Asian - Northern Ireland ethnic category 2011 census,6,2 +977441000000109,Mixed multiple ethnic groups: white and Asian - Northern Ireland ethnic category 2011 census,6,2 +977551000000106,Mixed multiple ethnic groups: any other Mixed or multiple ethnic background - Northern Ireland ethnic category 2011 census,7,2 +977561000000109,Mixed multiple ethnic groups: any other Mixed or Multiple ethnic background - Northern Ireland ethnic category 2011 census,7,2 +977591000000103,Asian or Asian British: Indian - Northern Ireland ethnic category 2011 census,8,3 +977711000000100,Asian or Asian British: Pakistani - Northern Ireland ethnic category 2011 census,9,3 +977731000000108,Asian or Asian British: Bangladeshi - Northern Ireland ethnic category 2011 census,10,3 +977751000000101,Asian or Asian British: Chinese - Northern Ireland ethnic category 2011 census,15,5 +977771000000105,Asian or Asian British: any other Asian background - Northern Ireland ethnic category 2011 census,11,3 +977791000000109,Black or African or Caribbean or Black British: African - Northern Ireland ethnic category 2011 census,13,4 +977811000000105,Black or African or Caribbean or Black British: Caribbean - Northern Ireland ethnic category 2011 census,12,4 +977831000000102,Black or African or Caribbean or Black British: other Black or African or Caribbean background - Northern Ireland ethnic category 2011 census,14,4 +977851000000109,Other ethnic group: Arab - Northern Ireland ethnic category 2011 census,16,5 +977861000000107,Other ethnic group: Arab - Northern Ireland ethnic category 2011 census,16,5 +977871000000100,Other ethnic group: any other ethnic group - Northern Ireland ethnic category 2011 census,16,5 +977881000000103,Other ethnic group: any other ethnic group - Northern Ireland ethnic category 2011 census,16,5 +977911000000103,White: Scottish - Scotland ethnic category 2011 census,1,1 +977931000000106,White: other British - Scotland ethnic category 2011 census,1,1 +977951000000104,White: Irish - Scotland ethnic category 2011 census,2,1 +977971000000108,White: Gypsy or Irish Traveller - Scotland ethnic category 2011 census,3,1 +978011000000101,White: Polish - Scotland ethnic category 2011 census,3,1 +978031000000109,White: any other White ethnic group - Scotland ethnic category 2011 census,3,1 +978041000000100,White: any other white ethnic group - Scotland ethnic category 2011 census,3,1 +978051000000102,Mixed or multiple ethnic groups: any Mixed or multiple ethnic group - Scotland ethnic category 2011 census,7,2 +978061000000104,Mixed or multiple ethnic groups: any Mixed or Multiple ethnic group - Scotland ethnic category 2011 census,7,2 +978071000000106,"Asian or Asian Scottish or Asian British: Pakistani, Pakistani Scottish or Pakistani British - Scotland ethnic category 2011 census",9,3 +978111000000100,"Asian or Asian Scottish or Asian British: Indian, Indian Scottish or Indian British - Scotland ethnic category 2011 census",8,3 +978171000000105,"Asian or Asian Scottish or Asian British: Bangladeshi, Bangladeshi Scottish or Bangladeshi British - Scotland ethnic category 2011 census",10,3 +978191000000109,Asian or Asian Scottish or Asian British: Chinese - Scotland ethnic category 2011 census,15,5 +978211000000108,Asian or Asian Scottish or Asian British: any other Asian group - Scotland ethnic category 2011 census,11,3 +978231000000100,"African: African, African Scottish or African British - Scotland ethnic category 2011 census",13,4 +978251000000107,African: any other African - Scotland ethnic category 2011 census,13,4 +978271000000103,"Caribbean or Black: Caribbean, Caribbean Scottish or Caribbean British - Scotland ethnic category 2011 census",14,4 +978341000000102,"Caribbean or Black: Black, Black Scottish or Black British - Scotland ethnic category 2011 census",14,4 +978361000000101,Caribbean or Black: any other Black or Caribbean group - Scotland ethnic category 2011 census,14,4 +978381000000105,"Other ethnic group: Arab, Arab Scottish or Arab British - Scotland ethnic category 2011 census",16,5 +978391000000107,"Other ethnic group: Arab, Arab Scottish or Arab British - Scotland ethnic category 2011 census",16,5 +978401000000105,Other ethnic group: any other ethnic group - Scotland ethnic category 2011 census,16,5 +978411000000107,Other ethnic group: any other ethnic group - Scotland ethnic category 2011 census,16,5 +978241000000109,African: African African Scottish or African British - Scotland ethnic category 2011 census,13,4 +977921000000109,White: Scottish - Scotland ethnic category 2011 census,1,1 +976941000000100,Black or African or Caribbean or Black British : other black or African or Caribbean background - England and Wales ethnic category 2011 census,14,4 +977601000000109,Asian or Asian British: Indian - Northern Ireland ethnic category 2011 census,8,3 +976661000000106,White: Irish - England and Wales ethnic category 2011 census,2,1 +976901000000103,Black or African or Caribbean or Black British: African - England and Wales ethnic category 2011 census,13,4 +976861000000105,Asian or Asian British: Chinese - England and Wales ethnic category 2011 census,15,5 +978021000000107,White: Polish - Scotland ethnic category 2011 census,3,1 +414752008,Mixed racial group (racial group),7,2 +976801000000106,Asian or Asian British: Indian - England and Wales ethnic category 2011 census,8,3 +494151000000103,White British - ethnic category 2001 census,1,1 +976881000000101,Asian or Asian British: any other Asian background - England and Wales ethnic category 2011 census,11,3 +976841000000109,Asian or Asian British: Bangladeshi - England and Wales ethnic category 2011 census,10,3 +977781000000107,Asian or Asian British: any other Asian background - Northern Ireland ethnic category 2011 census,11,3 +494171000000107,White Irish - ethnic category 2001 census,2,1 +413773004,Caucasian (racial group),3,1 +494181000000109,White Irish - ethnic category 2001 census,2,1 +976641000000105,White: English or Welsh or Scottish or Northern Irish or British - England and Wales ethnic category 2011 census,1,1 +978081000000108,Asian or Asian Scottish or Asian British: Pakistani Pakistani Scottish or Pakistani British - Scotland ethnic category 2011 census,9,3 +977381000000106,Irish Traveller - Northern Ireland ethnic category 2011 census,3,1 +978121000000106,Asian or Asian Scottish or Asian British: Indian Indian Scottish or Indian British - Scotland ethnic category 2011 census,8,3 +976921000000107,Black or African or Caribbean or Black British : Caribbean - England and Wales ethnic category 2011 census (finding),12,4 +978221000000102,Asian or Asian Scottish or Asian British: any other Asian group - Scotland ethnic category 2011 census,11,3 +976821000000102,Asian or Asian British: Pakistani - England and Wales ethnic category 2011 census,9,3 +977761000000103,Asian or Asian British: Chinese - Northern Ireland ethnic category 2011 census,15,5 +976701000000100,White: any other white background - England and Wales ethnic category 2011 census,3,1 +977361000000102,White - Northern Ireland ethnic category 2011 census,1,1 +977981000000105,White: Gypsy or Irish Traveller - Scotland ethnic category 2011 census,3,1 +977801000000108,Black or African or Caribbean or Black British: African - Northern Ireland ethnic category 2011 census,13,4 +414481008,Indian (racial group),8,3 +415226007,Race not stated (racial group),0,0 +977721000000106,Asian or Asian British: Pakistani - Northern Ireland ethnic category 2011 census,9,3 +977821000000104,Black or African or Caribbean or Black British: Caribbean - Northern Ireland ethnic category 2011 census,12,4 +978371000000108,Caribbean or Black: any other Black or Caribbean group - Scotland ethnic category 2011 census,14,4 +977741000000104,Asian or Asian British: Bangladeshi - Northern Ireland ethnic category 2011 census,10,3 +977841000000106,Black or African or Caribbean or Black British: other black or African or Caribbean background - Northern Ireland ethnic category 2011 census,14,4 +978201000000106,Asian or Asian Scottish or Asian British: Chinese - Scotland ethnic category 2011 census,15,5 +978261000000105,African: any other African - Scotland ethnic category 2011 census,13,4 +978181000000107,Asian or Asian Scottish or Asian British: Bangladeshi Bangladeshi Scottish or Banagaldeshi British - Scotland ethnic category 2011 census,10,3 +978351000000104,Caribbean or Black: Black Black Scottish or Black British - Scotland ethnic category 2011 census,14,4 +978281000000101,Caribbean or Black: Caribbean Caribbean Scottish or Caribbean British - Scotland ethnic category 2011 census,12,4 +977961000000101,White: Irish - Scotland ethnic category 2011 census,2,1 +977941000000102,White: other British - Scotland ethnic category 2011 census,1,1 +976681000000102,White: Gypsy or Irish Traveller - England and Wales ethnic category 2011 census,3,1 +494141000000101,White British - ethnic category 2001 census,1,1 +415794004,Unknown racial group (racial group),0,0 +521000220104,Black Irish (ethnic group),14,4 \ No newline at end of file diff --git a/codelists/user-candrews-mixed.csv b/codelists/user-candrews-mixed.csv new file mode 100644 index 0000000..191e91c --- /dev/null +++ b/codelists/user-candrews-mixed.csv @@ -0,0 +1,35 @@ +code,term +134J.,Race: Mixed +134L.,Race: Afro-caucasian +9S5..,"Black - other, mixed" +9S51.,Other Black - Black/White orig +9S52.,Other Black - Black/Asian orig +9SB..,"Other ethnic, mixed origin" +9SB1.,"Other ethnic, Black/White orig" +9SB2.,"Other ethnic, Asian/White orig" +9SB3.,"Other ethnic, mixed white orig" +9SB4.,"Other ethnic, other mixed orig" +XaFwG,Mixed ethnic census group +XaIB5,Black Caribbean and White +XaIB6,Black African and White +XaJQy,White and Black Caribbean - ethnic category 2001 census +XaJQz,White and Black African - ethnic category 2001 census +XaJR0,White and Asian - ethnic category 2001 census +XaJR1,Other Mixed background - ethnic category 2001 census +XaJRH,Black and Asian - ethnic category 2001 census +XaJRI,Black and Chinese - ethnic category 2001 census +XaJRJ,Black and White - ethnic category 2001 census +XaJRK,Chinese and White - ethnic category 2001 census +XaJRL,Asian and Chinese - ethnic category 2001 census +XaJRM,Other Mixed or Mixed unspecified ethnic category 2001 census +XaJRN,Mixed Asian - ethnic category 2001 census +XaJRY,Mixed Black - ethnic category 2001 census +XactL,Mixed: White+Black Caribbean - Eng+Wales eth cat 2011 census +Xactd,Mixed: White+Black African - Eng+Wales eth cat 2011 census +Xacte,Mixed: White+Asian - Eng+Wales ethnic category 2011 census +Xactf,Mixed: other Mixed/multiple backgrd - Eng+Wales 2011 census +XacuS,Mixed: White and Black Caribbean - NI ethnic cat 2011 census +XacuT,Mixed: White and Black African - NI ethnic cat 2011 census +XacuU,Mixed: White and Asian - NI ethnic category 2011 census +Xacua,Mixed: other Mixed/multiple ethnic backgrd - NI 2011 census +Xacuz,Mixed/multiple ethnic grps: any- Scot ethnic cat 2011 census diff --git a/codelists/user-candrews-other.csv b/codelists/user-candrews-other.csv new file mode 100644 index 0000000..5e28d17 --- /dev/null +++ b/codelists/user-candrews-other.csv @@ -0,0 +1,61 @@ +code,term +134C.,Race: Arab +134D.,Race: Chinese +134E.,Race: Japanese +134F.,Race: Korean +134G.,Race: Oriental +9SA..,Other ethnic non-mixed (NMO) +9SA1.,Brit. ethnic minor. spec.(NMO) +9SA2.,Brit. ethnic minor. unsp (NMO) +9SA4.,N African Arab &/or Iranian (NMO) +9SAD.,Other ethnic NEC (NMO) +9T1..,New Zealand ethnic groups +9T12.,Other European in New Zealand +9T13.,New Zealand Maori +9T14.,Samoan +9T15.,Cook Island Maori +9T16.,Tongan +9T17.,Niuean +9T18.,Tokelauan +9T19.,Fijian +9T1A.,Other Pacific ethnic group +9T1C.,Chinese +9T1Y.,Other New Zealand ethnic group +9T1Z.,New Zealand ethnic group NOS +X76Gp,Race: Other +XE2Nx,N African Arab/Iranian (NMO) +XM1SB,North African Arab (NMO) +XM1SC,Iranian (NMO) +XaE4A,Vietnamese +XaFx1,Other ethnic group +XaJR9,Chinese - ethnic category 2001 census +XaJRA,Other - ethnic category 2001 census +XaJRc,Vietnamese - ethnic category 2001 census +XaJRd,Japanese - ethnic category 2001 census +XaJRe,Filipino - ethnic category 2001 census +XaJRf,Malaysian - ethnic category 2001 census +XaJSR,Jewish - ethnic category 2001 census +XaJSS,Arab - ethnic category 2001 census +XaJSU,"Mid East (excl Israeli, Iranian & Arab) - eth cat 2001 cens" +XaJSV,Israeli - ethnic category 2001 census +XaJSW,Iranian - ethnic category 2001 census +XaJSX,Kurdish - ethnic category 2001 census +XaJSY,Moroccan - ethnic category 2001 census +XaJSZ,Latin American - ethnic category 2001 census +XaJSa,South and Central American - ethnic category 2001 census +XaJSb,Mauritian/Seychellois/Maldivian/St Helena eth cat 2001census +XaJSc,Buddhist - ethnic category 2001 census +XaJSd,Hindu - ethnic category 2001 census +XaJSe,Muslim - ethnic category 2001 census +XaJSf,Sikh - ethnic category 2001 census +XaJSg,Any other group - ethnic category 2001 census +XaN9x,Yemeni +Xactj,Asian/Asian Brit: Chinese - Eng+Wales ethnic cat 2011 census +Xacto,Other ethnic group: Arab - Eng+Wales ethnic cat 2011 census +Xactp,Other ethnic: any other grp - Eng+Wales eth cat 2011 census +Xacuk,Asian/Asian British: Chinese - NI ethnic cat 2011 census +Xacup,Other ethnic group: Arab - NI ethnic category 2011 census +Xacuq,Other ethnic group: any other grp- NI ethnic cat 2011 census +XacvF,Asian: Chinese - Scotland ethnic category 2011 census +Xacvb,Other ethnic grp: Arab/Arab Scot/Arab British- Scotland 2011 +Xacvc,Other ethnic grp: any other ethnic grp- Scotland 2011 census diff --git a/codelists/user-candrews-white.csv b/codelists/user-candrews-white.csv new file mode 100644 index 0000000..25a433e --- /dev/null +++ b/codelists/user-candrews-white.csv @@ -0,0 +1,81 @@ +code,term +134B.,Race: Caucasian +9S1..,White - ethnic group +9SA9.,Irish (NMO) +9SAA.,Greek &/or Greek Cypriot (NMO) +9SAB.,Turkish &/or Turkish Cypriot (NMO) +9SAC.,Other European (NMO) +9T11.,New Zealand European +XE2Nz,Greek/Greek Cypriot (NMO) +XE2O0,Turkish/Turkish Cypriot (NMO) +XM1SF,Greek (NMO) +XM1SG,Greek Cypriot (NMO) +XM1SH,Turkish (NMO) +XM1SI,Turkish Cypriot (NMO) +XS7AU,Gypsies +XaFwD,White British +XaFwE,White Irish +XaFwF,Other white ethnic group +XaFx2,Irish traveller +XaIuh,White Scottish +XaIui,Other white British ethnic group +XaJQv,British or mixed British - ethnic category 2001 census +XaJQw,Irish - ethnic category 2001 census +XaJQx,Other White background - ethnic category 2001 census +XaJRC,English - ethnic category 2001 census +XaJRD,Scottish - ethnic category 2001 census +XaJRE,Welsh - ethnic category 2001 census +XaJRF,Northern Irish - ethnic category 2001 census +XaJRG,Cornish - ethnic category 2001 census +XaJRg,Cypriot (part not stated) - ethnic category 2001 census +XaJRh,Ulster Scots - ethnic category 2001 census +XaJRi,Greek - ethnic category 2001 census +XaJRj,Greek Cypriot - ethnic category 2001 census +XaJRk,Turkish - ethnic category 2001 census +XaJRl,Turkish Cypriot - ethnic category 2001 census +XaJRm,Italian - ethnic category 2001 census +XaJSB,Irish Traveller - ethnic category 2001 census +XaJSC,Traveller - ethnic category 2001 census +XaJSD,Gypsy/Romany - ethnic category 2001 census +XaJSE,Polish - ethnic category 2001 census +XaJSF,Baltic Estonian/Latvian/Lithuanian - ethn categ 2001 census +XaJSG,Commonwealth (Russian) Indep States - ethn categ 2001 census +XaJSH,Kosovan - ethnic category 2001 census +XaJSI,Albanian - ethnic category 2001 census +XaJSJ,Bosnian - ethnic category 2001 census +XaJSK,Croatian - ethnic category 2001 census +XaJSL,Serbian - ethnic category 2001 census +XaJSM,Other republics former Yugoslavia - ethnic categ 2001 census +XaJSN,Mixed Irish and other White - ethnic category 2001 census +XaJSO,Other mixed White - ethnic category 2001 census +XaJSP,Oth White European/European unsp/Mixed European 2001 census +XaJSQ,Other White or White unspecified ethnic category 2001 census +XaQEa,White British - ethnic category 2001 census +XaQEb,White Irish - ethnic category 2001 census +XaR4o,Romanian +XaR4p,Bulgarian +XaR61,Czech +XaVw5,Slovak +XaW8w,Portuguese +XactH,White:Eng/Welsh/Scot/NI/Brit - England and Wales 2011 census +XactI,White: Irish - England and Wales ethnic category 2011 census +XactJ,White: Gypsy/Irish Traveller - Eng+Wales eth cat 2011 census +XactK,White: other White backgrd- Eng+Wales ethnic cat 2011 census +XacuQ,White - Northern Ireland ethnic category 2011 census +XacuR,Irish Traveller - Northern Ireland ethnic cat 2011 census +Xacus,White: Scottish - Scotland ethnic category 2011 census +Xacut,White: other British - Scotland ethnic category 2011 census +Xacuu,White: Irish - Scotland ethnic category 2011 census +Xacuv,White: Gypsy/Irish Traveller - Scotland ethnic cat 2011 cens +Xacux,White: Polish - Scotland ethnic category 2011 census +Xacuy,White: other White ethnic grp- Scotland ethnic cat 2011 cens +XaedN,Slovak Roma +XaedQ,Czech Roma +XaedS,Hungarian Roma +XaedT,Polish Roma +XaedU,Romanian Roma +XaedV,Roma ethnic group +XaedW,Bulgarian Roma +Y1527,Traveller +Y9930,Race - British +Y9932,Race - Mediterranean diff --git a/codelists/user-rohini-mathur-ethnicity_group1.csv b/codelists/user-rohini-mathur-ethnicity_group1.csv deleted file mode 100644 index b8c2c3a..0000000 --- a/codelists/user-rohini-mathur-ethnicity_group1.csv +++ /dev/null @@ -1,62 +0,0 @@ -code,term -10008004,Ewe -10117001,Finns -1024701000000100,Ethnicity not stated -10292001,Guamians -1036211000000103,Slovak Roma -1036251000000104,Czech Roma -1036281000000105,Hungarian Roma -1036301000000106,Polish Roma -1036321000000102,Romanian Roma -1036341000000109,Roma -1036361000000105,Bulgarian Roma -10432001,Onge -107691000000105,Caribbean - ethnic category 2001 census -108342005,South Asian AND/OR Australian aborigine -110401000000103,Turkish - ethnic category 2001 census -110751000000108,Indian or British Indian - ethnic category 2001 census -110761000000106,English - ethnic category 2001 census -110771000000104,Black and White - ethnic category 2001 census -110781000000102,Sinhalese - ethnic category 2001 census -110791000000100,Black British - ethnic category 2001 census -110831000000107,Hindu - ethnic category 2001 census -113169009,Armenians -113170005,Aymara -113171009,Coushatta -11794009,Kenyans -12556008,Tamils -13233008,Flathead -1340002,Malays -13440006,Tanganyikans -139955009,O/E - ethnic group -139960008,O/E - ethnic group NOS -14045001,Caucasian -14176005,Danes -14470009,Tutsi -1451003,Greeks -14999008,Welsh -15086000,African American -154159009,Ethnic groups (census) -154160004,White - ethnic group -154161000,White British -154162007,White Irish -154163002,Other white ethnic group -154164008,Black Caribbean -154165009,Black African -154166005,"Black, other, non-mixed origin" -154167001,Black British -154168006,Black Caribbean &/or W.I. &/or Guyana -154169003,Black N African &/or Arab &/or Iranian -154170002,Black - other African country -154171003,Black E Afric Asia &/or Indo-Caribb -154172005,Black Indian sub-continent -154173000,Black - other Asian -154174006,Black Black - other -154175007,"Black - other, mixed" -154176008,Other Black - Black/White orig -154177004,Other Black - Black/Asian orig -154178009,Indian -154179001,Pakistani -154180003,Bangladeshi -154181004,Chinese -154182006,Other ethnic non-mixed (NMO) diff --git a/codelists/user-rohini-mathur-ethnicity_group10.csv b/codelists/user-rohini-mathur-ethnicity_group10.csv deleted file mode 100644 index d08add6..0000000 --- a/codelists/user-rohini-mathur-ethnicity_group10.csv +++ /dev/null @@ -1,62 +0,0 @@ -code,term -976751000000104,Mixed multiple ethnic groups: White and Asian - England and Wales ethnic category 2011 census -976761000000101,Mixed multiple ethnic groups: white and Asian - England and Wales ethnic category 2011 census -976771000000108,Mixed multiple ethnic groups: any other Mixed or multiple ethnic background - England and Wales ethnic category 2011 census -976781000000105,Mixed multiple ethnic groups: any other Mixed or Multiple ethnic background - England and Wales ethnic category 2011 census -976791000000107,Asian or Asian British: Indian - England and Wales ethnic category 2011 census -976811000000108,Asian or Asian British: Pakistani - England and Wales ethnic category 2011 census -976831000000100,Asian or Asian British: Bangladeshi - England and Wales ethnic category 2011 census -976851000000107,Asian or Asian British: Chinese - England and Wales ethnic category 2011 census -976871000000103,Asian or Asian British: any other Asian background - England and Wales ethnic category 2011 census -976891000000104,Black or African or Caribbean or Black British: African - England and Wales ethnic category 2011 census -976911000000101,Black or African or Caribbean or Black British: Caribbean - England and Wales ethnic category 2011 census -976931000000109,Black or African or Caribbean or Black British: other Black or African or Caribbean background - England and Wales ethnic category 2011 census -976951000000102,Other ethnic group: Arab - England and Wales ethnic category 2011 census -976961000000104,Other ethnic group: Arab - England and Wales ethnic category 2011 census -976971000000106,Other ethnic group: any other ethnic group - England and Wales ethnic category 2011 census -976981000000108,Other ethnic group: any other ethnic group - England and Wales ethnic category 2011 census -977351000000100,White - Northern Ireland ethnic category 2011 census -977371000000109,Irish Traveller - Northern Ireland ethnic category 2011 census -977391000000108,Mixed multiple ethnic groups: White and Black Caribbean - Northern Ireland ethnic category 2011 census -977401000000106,Mixed multiple ethnic groups: white and black Caribbean - Northern Ireland ethnic category 2011 census -977411000000108,Mixed multiple ethnic groups: White and Black African - Northern Ireland ethnic category 2011 census -977421000000102,Mixed multiple ethnic groups: white and black African - Northern Ireland ethnic category 2011 census -977431000000100,Mixed multiple ethnic groups: White and Asian - Northern Ireland ethnic category 2011 census -977441000000109,Mixed multiple ethnic groups: white and Asian - Northern Ireland ethnic category 2011 census -977551000000106,Mixed multiple ethnic groups: any other Mixed or multiple ethnic background - Northern Ireland ethnic category 2011 census -977561000000109,Mixed multiple ethnic groups: any other Mixed or Multiple ethnic background - Northern Ireland ethnic category 2011 census -977591000000103,Asian or Asian British: Indian - Northern Ireland ethnic category 2011 census -977711000000100,Asian or Asian British: Pakistani - Northern Ireland ethnic category 2011 census -977731000000108,Asian or Asian British: Bangladeshi - Northern Ireland ethnic category 2011 census -977751000000101,Asian or Asian British: Chinese - Northern Ireland ethnic category 2011 census -977771000000105,Asian or Asian British: any other Asian background - Northern Ireland ethnic category 2011 census -977791000000109,Black or African or Caribbean or Black British: African - Northern Ireland ethnic category 2011 census -977811000000105,Black or African or Caribbean or Black British: Caribbean - Northern Ireland ethnic category 2011 census -977831000000102,Black or African or Caribbean or Black British: other Black or African or Caribbean background - Northern Ireland ethnic category 2011 census -977851000000109,Other ethnic group: Arab - Northern Ireland ethnic category 2011 census -977861000000107,Other ethnic group: Arab - Northern Ireland ethnic category 2011 census -977871000000100,Other ethnic group: any other ethnic group - Northern Ireland ethnic category 2011 census -977881000000103,Other ethnic group: any other ethnic group - Northern Ireland ethnic category 2011 census -977911000000103,White: Scottish - Scotland ethnic category 2011 census -977931000000106,White: other British - Scotland ethnic category 2011 census -977951000000104,White: Irish - Scotland ethnic category 2011 census -977971000000108,White: Gypsy or Irish Traveller - Scotland ethnic category 2011 census -978011000000101,White: Polish - Scotland ethnic category 2011 census -978031000000109,White: any other White ethnic group - Scotland ethnic category 2011 census -978041000000100,White: any other white ethnic group - Scotland ethnic category 2011 census -978051000000102,Mixed or multiple ethnic groups: any Mixed or multiple ethnic group - Scotland ethnic category 2011 census -978061000000104,Mixed or multiple ethnic groups: any Mixed or Multiple ethnic group - Scotland ethnic category 2011 census -978071000000106,"Asian or Asian Scottish or Asian British: Pakistani, Pakistani Scottish or Pakistani British - Scotland ethnic category 2011 census" -978111000000100,"Asian or Asian Scottish or Asian British: Indian, Indian Scottish or Indian British - Scotland ethnic category 2011 census" -978171000000105,"Asian or Asian Scottish or Asian British: Bangladeshi, Bangladeshi Scottish or Bangladeshi British - Scotland ethnic category 2011 census" -978191000000109,Asian or Asian Scottish or Asian British: Chinese - Scotland ethnic category 2011 census -978211000000108,Asian or Asian Scottish or Asian British: any other Asian group - Scotland ethnic category 2011 census -978231000000100,"African: African, African Scottish or African British - Scotland ethnic category 2011 census" -978251000000107,African: any other African - Scotland ethnic category 2011 census -978271000000103,"Caribbean or Black: Caribbean, Caribbean Scottish or Caribbean British - Scotland ethnic category 2011 census" -978341000000102,"Caribbean or Black: Black, Black Scottish or Black British - Scotland ethnic category 2011 census" -978361000000101,Caribbean or Black: any other Black or Caribbean group - Scotland ethnic category 2011 census -978381000000105,"Other ethnic group: Arab, Arab Scottish or Arab British - Scotland ethnic category 2011 census" -978391000000107,"Other ethnic group: Arab, Arab Scottish or Arab British - Scotland ethnic category 2011 census " -978401000000105,Other ethnic group: any other ethnic group - Scotland ethnic category 2011 census -978411000000107,Other ethnic group: any other ethnic group - Scotland ethnic category 2011 census diff --git a/codelists/user-rohini-mathur-ethnicity_group2.csv b/codelists/user-rohini-mathur-ethnicity_group2.csv deleted file mode 100644 index 834baa1..0000000 --- a/codelists/user-rohini-mathur-ethnicity_group2.csv +++ /dev/null @@ -1,62 +0,0 @@ -code,term -154183001,Brit. ethnic minor. spec.(NMO) -154184007,Brit. ethnic minor. unsp (NMO) -154185008,Caribbean I. &/or W.I. &/or Guyana (NMO) -154186009,N African Arab &/or Iranian (NMO) -154187000,Other African countries (NMO) -154188005,E Afric Asian &/or Indo-Carib (NMO) -154189002,Indian sub-continent (NMO) -154190006,Other Asian (NMO) -154191005,Irish (NMO) -154192003,Greek &/or Greek Cypriot (NMO) -154193008,Turkish &/or Turkish Cypriot (NMO) -154194002,Other European (NMO) -154195001,Other ethnic NEC (NMO) -154196000,"Other ethnic, mixed origin" -154197009,"Other ethnic, Black/White orig" -154198004,"Other ethnic, Asian/White orig" -154199007,"Other ethnic, mixed white orig" -154200005,"Other ethnic, other mixed orig" -154201009,Black Caribbean and White -154202002,Black African and White -154203007,Vietnamese -154204001,Ethnic group not given - patient refused -154205000,Ethnic group not recorded -154206004,Other black ethnic group -154207008,Other Asian ethnic group -154208003,Irish traveller -154209006,Other ethnic group -154210001,Ethnic groups (census) NOS -154211002,Ethnicity and other related nationality data -154212009,New Zealand ethnic groups -154213004,New Zealand European -154214005,Other European in New Zealand -154215006,New Zealand Maori -154216007,Samoan -154217003,Cook Island Maori -154218008,Tongan -154219000,Niuean -154220006,Tokelauan -154221005,Fijian -154222003,Other Pacific ethnic group -154223008,South East Asian -154224002,Chinese -154225001,Indian -154226000,Other Asian -154227009,Other New Zealand ethnic group -154229007,New Zealand ethnic group NOS -15801006,Kapingas -160531006,Race: West indian -162730000,On examination - ethnic group -162731001,On examination - Europeanoid -162732008,On examination - Negroid -162734009,On examination - Australoid -162735005,On examination - ethnic group NOS -17095009,Norwegians -17789004,Papuans -18167009,Black African -18575005,Oceanian -18583004,Estonians -185983003,Ethnic group (1991 census) (United Kingdom) -185984009,White - ethnic group -185985005,White British diff --git a/codelists/user-rohini-mathur-ethnicity_group3.csv b/codelists/user-rohini-mathur-ethnicity_group3.csv deleted file mode 100644 index f779881..0000000 --- a/codelists/user-rohini-mathur-ethnicity_group3.csv +++ /dev/null @@ -1,62 +0,0 @@ -code,term -185986006,White Irish -185987002,Other white ethnic group -185988007,Black Caribbean -185989004,"Black, other, non-mixed origin" -185990008,Black British -185991007,Black Caribbean &/or W.I. &/or Guyana -185992000,Black N African &/or Arab &/or Iranian -185993005,Black - other African country -185994004,Black E Afric Asia &/or Indo-Caribb -185995003,Black Indian sub-continent -185996002,Black - other Asian -185997006,Black Black - other -185998001,"Black - other, mixed" -185999009,Other Black - Black/White orig -186000006,Other Black - Black/Asian orig -186001005,Indian (East Indian) -186002003,Pakistani -186003008,Bangladeshi -186004002,Chinese -186005001,Other ethnic non-mixed (NMO) -186006000,British ethnic minority specified (NMO) -186007009,British ethnic minority unspecified (NMO) -186008004,Caribbean I. &/or W.I. &/or Guyana (NMO) -186009007,N African Arab &/or Iranian (NMO) -186010002,Other African countries (NMO) -186011003,E Afric Asian &/or Indo-Carib (NMO) -186012005,Indian sub-continent (NMO) -186013000,Other Asian (NMO) -186014006,Irish (NMO) -186015007,Greek &/or Greek Cypriot (NMO) -186016008,Turkish &/or Turkish Cypriot (NMO) -186017004,Other European (NMO) -186018009,Other ethnic NEC (NMO) -186019001,"Other ethnic, mixed origin" -186020007,"Other ethnic, Black/White origin" -186021006,"Other ethnic, Asian/White origin" -186022004,"Other ethnic, mixed white origin" -186023009,"Other ethnic, other mixed origin" -186024003,Black Caribbean and White -186025002,Black African and White -186026001,Vietnamese -186027005,Ethnic group not given - patient refused -186028000,Ethnic group not recorded -186029008,Other black ethnic group -186030003,Other Asian ethnic group -186031004,Irish traveller -186032006,Other ethnic group -186033001,Ethnic groups (census) NOS -186034007,Ethnicity / related nationality data -186035008,New Zealand ethnic groups -186036009,New Zealand European -186037000,Other European in New Zealand -186039002,New Zealand Maori -186040000,Cook Island Maori -186041001,Niuean -186042008,Tokelauan -186043003,Other Pacific ethnic group -186044009,South East Asian -186045005,Indian -186046006,Other Asian -186047002,Other New Zealand ethnic group diff --git a/codelists/user-rohini-mathur-ethnicity_group4.csv b/codelists/user-rohini-mathur-ethnicity_group4.csv deleted file mode 100644 index 37b61a6..0000000 --- a/codelists/user-rohini-mathur-ethnicity_group4.csv +++ /dev/null @@ -1,62 +0,0 @@ -code,term -186048007,New Zealand ethnic group NOS -18664001,Xavante -19085009,Saipanese -1919006,Egyptians -19434008,French -20140003,Hawaiians -202171000000101,Patient ethnicity unknown -20291009,Lacandon -20449009,Javanese -207971000000101,Patient ethnicity unknown -207981000000104,Patient ethnicity unknown -21047009,Aleuts -21868006,Madagascans -21993009,Indonesians -22007004,Shoshone -23517005,Polynesians -23534002,Melanesians -23922002,Batutsi -24812003,Mongol -25750005,Admiralty Islanders -25804004,English -26215007,South Asian Aborigine -2688009,Tristan da Cunhans -268914005,On examination - Mongoloid origin -270460000,Black Caribbean/West India/Guyana -270461001,Black N African/Arab/Iranian -270462008,Black East African Asian/Indo-Caribbean -270463003,Caribbean I./W.I./Guyana (NMO) -270464009,N African Arab/Iranian (NMO) -270465005,E Afric Asian/Indo-Carib (NMO) -270466006,Greek/Greek Cypriot (NMO) -270467002,Turkish/Turkish Cypriot (NMO) -2720008,Hututu -27301002,Paez -275586009,Black North African -275587000,Black Arab -275588005,Black Iranian -275589002,Black East African Asian -275590006,Black Indo-Caribbean -275591005,Caribbean Island (NMO) -275592003,West Indian (NMO) -275593008,Guyana (NMO) -275594002,North African Arab (NMO) -275595001,Iranian (NMO) -275596000,East African Asian (NMO) -275597009,Indo-Caribbean (NMO) -275599007,Greek (NMO) -275600005,Greek Cypriot (NMO) -275601009,Turkish (NMO) -275602002,Turkish Cypriot (NMO) -27683006,Ainu -27700004,Iraqi -28409002,Spaniards -2852001,Bhutanese -28562006,Poles -286009,Czech -28796001,Siamese -28821007,Easter Islanders -29343004,Bulgarian -296841000000102,Yemeni -309643000,Black West Indian diff --git a/codelists/user-rohini-mathur-ethnicity_group5.csv b/codelists/user-rohini-mathur-ethnicity_group5.csv deleted file mode 100644 index 5677ba1..0000000 --- a/codelists/user-rohini-mathur-ethnicity_group5.csv +++ /dev/null @@ -1,62 +0,0 @@ -code,term -309644006,Black Guyana -312859007,Vietnamese -312860002,Ethnic group not given - patient refused -312861003,Ethnic group not recorded -315236000,White British -315237009,White Irish -315238004,Other white ethnic group -315239007,Mixed ethnic census group -315240009,Black - ethnic group -315279003,Other black ethnic group -315280000,Asian - ethnic group -315281001,Other Asian ethnic group -315282008,Other ethnic group -315283003,Irish traveller -315634007,Black Caribbean and White -315635008,Black African and White -31637002,Italians -32045009,Georgians -32513008,Dyaks -32873005,Bloods -33182009,Trukese -3353005,Pueblo -33897005,Chinese -34334001,New Caledonians -35007000,Utes -354441000000105,Ethnicity - National Public Health Classification -36329002,Slovak -364699009,Ethnic group -365455004,Ethnic groups (1991 census) (United Kingdom) -365456003,Finding of ethnicity / related nationality data -367505005,Caucasian (living organism) -3698008,Micronesians -372148003,Ethnic group -37474002,Ghanaians -37843006,Fulani -38144004,Athabascans -3818007,Senegalese -38361009,Koreans -38750003,Bororo -39007007,Black Jews -393199009,Gypsies -394149000,Gypsies -394635008,Gypsies -397607002,"Perioperative plan of care consistent with patient value system, lifestyle, ethnicity, and culture" -39764005,Bantu -397731000,Ethnic group finding -398089004,Ethnic background -401213008,White Scottish -401214002,Other white British ethnic group -40165009,Buriats -40182006,Gypsies -4073004,Palauans -41076003,Mozambiquans -41121000000107,Other white British ethnic group -413465009,Afro-Caribbean -413466005,Afro-Caucasian -413569000,Arab -414152003,European -414551003,Japanese -414661004,Melanesian -414978006,Oriental diff --git a/codelists/user-rohini-mathur-ethnicity_group6.csv b/codelists/user-rohini-mathur-ethnicity_group6.csv deleted file mode 100644 index 74c7bcb..0000000 --- a/codelists/user-rohini-mathur-ethnicity_group6.csv +++ /dev/null @@ -1,62 +0,0 @@ -code,term -41798002,Caroline Islanders -42632009,Andamanese -4299001,Marathas -43056000,Cuna -43481000000100,Other white British ethnic group -43608005,Australian Aborigines -43890005,Dieguenos -443225003,Ethnicity of caregiver -44460002,Turks -445343003,Romanian -44881000000100,White Scottish -44891000000103,Other white British ethnic group -45465003,Basques -46110004,Somalis -46723002,Badagas -47250000,Bruneians -47327008,Mexican Indians -48118002,Yapese -48294008,Solomon Islanders -48375000,Seminole -48393004,Ethnic group finding -48679001,Bogobos -49202008,Gilbertese -494131000000105,White British - ethnic category 2001 census -494161000000100,White Irish - ethnic category 2001 census -503391000000104,Ethnicity of carer -503401000000101,Ethnicity of carer -503411000000104,Ethnicity of carer -50405005,Senoi -51750002,Hottentot -51827000,Oriental Jews -518701000000103,Romanian -518721000000107,Bulgarian -519681000000108,Czech -52075006,Congolese -53195006,Kirghiz -53460002,Serbs -55990000,Inca -56056003,Belgians -57405008,Chenchu -57539009,Navaho -58047002,Barundi -583481000000105,Other ethnic NEC (NMO) -583491000000107,Ethnic groups (census) NOS -591311000000105,On examination - ethnic group NOS -592491000000104,Other New Zealand ethnic group -592501000000105,New Zealand ethnic group NOS -59366001,Ibo -59487007,Syrians -59597001,Marshallese -60157000,Ellice Islanders -62598008,Venezuelan Indians -63457007,Maya -6373008,Choco -63732001,New Hebrideans -63736003,Taiwanese -64483007,Indians (Hindi-speaking) -64693008,Hungarian -651601000000100,Black Black - other -65776006,Blackfeet -661731000000107,Other Pacific ethnic group diff --git a/codelists/user-rohini-mathur-ethnicity_group7.csv b/codelists/user-rohini-mathur-ethnicity_group7.csv deleted file mode 100644 index af0f286..0000000 --- a/codelists/user-rohini-mathur-ethnicity_group7.csv +++ /dev/null @@ -1,62 +0,0 @@ -code,term -661741000000103,Other Asian -66406004,Huasteco -666871000000107,Other ethnic group -668681000000107,Other white ethnic group -66920001,Amerind -67165000,Lapps -67439005,Msutu -67931002,Aztec -68486007,Austrians -69865008,Fijian -69983001,Irani -704385002,Punjabi -704386001,Orang asli -704387005,Kadazan -704388000,Melanau -704389008,Murut -704390004,Bajau -704391000,Bidayuh -704392007,Iban -710011000000101,Slovak -71176007,Pygmies -718021000000105,Portuguese -718131000000106,Nepali -718958002,Roma -718959005,Czech Roma -718960000,Romanian Roma -718961001,Slovak Roma -718962008,Bulgarian Roma -718963003,Hungarian Roma -718964009,Polish Roma -71949006,Chippewa -72201005,Hobe -72248007,Kikuyu -72337002,Brazilian Indians -723621000000103,Ethnicity -72809004,Icelanders -728721000000100,Carer from Black and minority ethnic group -728731000000103,Carer from Black and Minority Ethnic group -733078003,Ukrainian -733446001,Canadian -735001008,Scandinavian -73524008,Caingang -73736004,Maori -74159009,Melanuans -74302004,Apache -75301003,Mapuche -75326007,Labradors -75704009,Toba -76253004,Zulu -763726001,Refusal by patient to provide information about ethnic group -76460008,Yanomama -76574004,Swiss -76768002,Filipinos -76775001,Ugandans -76883002,Huichol -7695005,Germans -77502007,Atacamenos -77686000,Kwakiutl -77711000000105,Other white British ethnic group -79434006,Quechua -80208004,Portuguese diff --git a/codelists/user-rohini-mathur-ethnicity_group8.csv b/codelists/user-rohini-mathur-ethnicity_group8.csv deleted file mode 100644 index 9748e01..0000000 --- a/codelists/user-rohini-mathur-ethnicity_group8.csv +++ /dev/null @@ -1,62 +0,0 @@ -code,term -80528001,Xosa -81035008,Pakistani (Urduspeakers) -8124001,West Africans -81283004,Todas -81403004,Swedes -81560001,Tongan -81653003,Pehuenches -81846005,Naiars -82121000000108,Other white British ethnic group -82174001,Shona -83365001,Thais -83584002,Luo -83939006,Irula -85163001,Russians -85371009,Bushmen -85515006,Eskimo -86275006,Samoan -86461000000107,Sri Lankan - ethnic category 2001 census -870448005,Khoikhoi -87323008,Nez Percé -88790004,Abyssinians (Amharas) -88839008,Sudanese -88911000000101,Irish Traveller - ethnic category 2001 census -88921000000107,Traveller - ethnic category 2001 census -88931000000109,Gypsy/Romany - ethnic category 2001 census -88934004,Nigerians -88941000000100,Polish - ethnic category 2001 census -88951000000102,Baltic States (Estonian or Latvian or Lithuanian) - ethnic category 2001 census -88961000000104,Commonwealth of (Russian) Independent States - ethnic category 2001 census -88971000000106,Albanian - ethnic category 2001 census -88981000000108,Serbian - ethnic category 2001 census -88991000000105,Jewish - ethnic category 2001 census -89001000000105,Arab - ethnic category 2001 census -89011000000107,Iranian - ethnic category 2001 census -89021000000101,South and Central American - ethnic category 2001 census -89026003,Alacaluf -89031000000104,Muslim - ethnic category 2001 census -90027003,Arabs -90348007,Ghashgai -90822005,Gambians -91066000,Tatars -91191002,Oraons -91488008,New Britons -9158000,Liberians -92381000000106,Ethnic category - 2001 census -92391000000108,British or mixed British - ethnic category 2001 census -92401000000106,Irish - ethnic category 2001 census -92411000000108,Other White background - ethnic category 2001 census -92421000000102,White and Black Caribbean - ethnic category 2001 census -92431000000100,White and Black African - ethnic category 2001 census -92441000000109,White and Asian - ethnic category 2001 census -92451000000107,Other Mixed background - ethnic category 2001 census -92461000000105,Pakistani or British Pakistani - ethnic category 2001 census -92471000000103,Bangladeshi or British Bangladeshi - ethnic category 2001 census -92481000000101,Other Asian background - ethnic category 2001 census -92491000000104,African - ethnic category 2001 census -92501000000105,Other Black background - ethnic category 2001 census -92511000000107,Chinese - ethnic category 2001 census -92521000000101,Other - ethnic category 2001 census -92531000000104,Ethnic category not stated - 2001 census -92541000000108,Scottish - ethnic category 2001 census diff --git a/codelists/user-rohini-mathur-ethnicity_group9.csv b/codelists/user-rohini-mathur-ethnicity_group9.csv deleted file mode 100644 index e16210e..0000000 --- a/codelists/user-rohini-mathur-ethnicity_group9.csv +++ /dev/null @@ -1,62 +0,0 @@ -code,term -92551000000106,Welsh - ethnic category 2001 census -92561000000109,Northern Irish - ethnic category 2001 census -92571000000102,Cornish - ethnic category 2001 census -92581000000100,Black and Asian - ethnic category 2001 census -92591000000103,Black and Chinese - ethnic category 2001 census -92601000000109,Chinese and White - ethnic category 2001 census -92611000000106,Asian and Chinese - ethnic category 2001 census -92621000000100,Other Mixed or Mixed unspecified - ethnic category 2001 census -92631000000103,Mixed Asian - ethnic category 2001 census -92641000000107,Punjabi - ethnic category 2001 census -92651000000105,Kashmiri - ethnic category 2001 census -92661000000108,East African Asian - ethnic category 2001 census -92671000000101,Tamil - ethnic category 2001 census -92681000000104,British Asian - ethnic category 2001 census -92691000000102,Caribbean Asian - ethnic category 2001 census -92701000000102,Other Asian or Asian unspecified - ethnic category 2001 census -92711000000100,Somali - ethnic category 2001 census -92721000000106,Mixed Black - ethnic category 2001 census -92731000000108,Nigerian - ethnic category 2001 census -92741000000104,Other Black or Black unspecified - ethnic category 2001 census -92751000000101,Vietnamese - ethnic category 2001 census -92761000000103,Japanese - ethnic category 2001 census -92771000000105,Filipino - ethnic category 2001 census -92781000000107,Malaysian - ethnic category 2001 census -92791000000109,Cypriot (part not stated) - ethnic category 2001 census -93921000000101,Ulster Scots - ethnic category 2001 census -93931000000104,Greek - ethnic category 2001 census -93941000000108,Greek Cypriot - ethnic category 2001 census -93951000000106,Turkish Cypriot - ethnic category 2001 census -93961000000109,Italian - ethnic category 2001 census -93981000000100,Kosovan - ethnic category 2001 census -93991000000103,Bosnian - ethnic category 2001 census -94001000000108,Croatian - ethnic category 2001 census -94011000000105,Other republics which made up the former Yugoslavia - ethnic category 2001 census -94021000000104,Mixed Irish and other White - ethnic category 2001 census -94031000000102,Other mixed White - ethnic category 2001 census -94041000000106,Other White European or European unspecified or Mixed European - ethnic category 2001 census -94051000000109,Other White or White unspecified - ethnic category 2001 census -94061000000107,North African - ethnic category 2001 census -94071000000100,"Middle Eastern (excluding Israeli, Iranian and Arab) - ethnic category 2001 census" -94081000000103,Israeli - ethnic category 2001 census -94091000000101,Kurdish - ethnic category 2001 census -94101000000109,Moroccan - ethnic category 2001 census -94111000000106,Latin American - ethnic category 2001 census -94121000000100,Multi-ethnic islands: Mauritian or Seychellois or Maldivian or St Helena - ethnic category 2001 census -94131000000103,Buddhist - ethnic category 2001 census -94141000000107,Sikh - ethnic category 2001 census -94151000000105,Any other group - ethnic category 2001 census -9533000,Dutch -976551000000109,Ethnic category - 2011 census -976571000000100,Ethnic category - 2011 census England and Wales -976591000000101,Ethnic category - 2011 census Northern Ireland -976611000000109,Ethnic category - 2011 census Scotland -976631000000101,White: English or Welsh or Scottish or Northern Irish or British - England and Wales ethnic category 2011 census -976651000000108,White: Irish - England and Wales ethnic category 2011 census -976671000000104,White: Gypsy or Irish Traveller - England and Wales ethnic category 2011 census -976691000000100,White: any other White background - England and Wales ethnic category 2011 census -976711000000103,Mixed multiple ethnic groups: White and Black Caribbean - England and Wales ethnic category 2011 census -976721000000109,Mixed multiple ethnic groups: white and black Caribbean - England and Wales ethnic category 2011 census -976731000000106,Mixed multiple ethnic groups: White and Black African - England and Wales ethnic category 2011 census -976741000000102,Mixed multiple ethnic groups: white and black African - England and Wales ethnic category 2011 census diff --git a/data/ethnicity_2021_census_16_categories.csv.gz b/data/ethnicity_2021_census_16_categories.csv.gz new file mode 100644 index 0000000..4db0511 Binary files /dev/null and b/data/ethnicity_2021_census_16_categories.csv.gz differ diff --git a/data/ethnicity_2021_census_2001_16_categories.csv.gz b/data/ethnicity_2021_census_2001_16_categories.csv.gz new file mode 100644 index 0000000..4db0511 Binary files /dev/null and b/data/ethnicity_2021_census_2001_16_categories.csv.gz differ diff --git a/data/ethnicity_2021_census_2001_5_categories.csv.gz b/data/ethnicity_2021_census_2001_5_categories.csv.gz new file mode 100644 index 0000000..d9cc97d Binary files /dev/null and b/data/ethnicity_2021_census_2001_5_categories.csv.gz differ diff --git a/data/ethnicity_2021_census_5_categories.csv.gz b/data/ethnicity_2021_census_5_categories.csv.gz new file mode 100644 index 0000000..0c7707d Binary files /dev/null and b/data/ethnicity_2021_census_5_categories.csv.gz differ diff --git a/data/ethnicity_ons.csv.gz b/data/ethnicity_ons.csv.gz new file mode 100644 index 0000000..ec0ced3 Binary files /dev/null and b/data/ethnicity_ons.csv.gz differ diff --git a/data/ethnicity_ons_2021.csv.gz b/data/ethnicity_ons_2021.csv.gz new file mode 100644 index 0000000..d9cc97d Binary files /dev/null and b/data/ethnicity_ons_2021.csv.gz differ diff --git a/data/nomis_2021_11_22_213653.xlsx b/data/nomis_2021_11_22_213653.xlsx new file mode 100644 index 0000000..1a4230f Binary files /dev/null and b/data/nomis_2021_11_22_213653.xlsx differ diff --git a/data/nomis_2022_12_01_124621.xlsx b/data/nomis_2022_12_01_124621.xlsx new file mode 100644 index 0000000..c1a76fc Binary files /dev/null and b/data/nomis_2022_12_01_124621.xlsx differ diff --git a/data/populationbyimdenglandandwales2020.xlsx b/data/populationbyimdenglandandwales2020.xlsx new file mode 100644 index 0000000..376506f Binary files /dev/null and b/data/populationbyimdenglandandwales2020.xlsx differ diff --git a/data/validation_script.py b/data/validation_script.py new file mode 100644 index 0000000..2d5e6f8 --- /dev/null +++ b/data/validation_script.py @@ -0,0 +1,113 @@ +from lib_phenotype_validation import * + +############################ CONFIGURE OPTIONS HERE ################################ + +# Import file +input_path = "output/data/input.feather" + +# Definitions +definitions = ["ethnicity_5", "ethnicity_new_5", "ethnicity_primis_5"] + +# Code dictionary +code_dict = { + "imd": { + 0: "Unknown", + 1: "1 Most deprived", + 2: "2", + 3: "3", + 4: "4", + 5: "5 Least deprived", + }, + "ethnicity_5": {1: "White", 2: "Mixed", 3: "Asian", 4: "Black", 5: "Other"}, + "ethnicity_new_5": {1: "White", 2: "Mixed", 3: "Asian", 4: "Black", 5: "Other"}, + "ethnicity_primis_5": {1: "White", 2: "Mixed", 3: "Asian", 4: "Black", 5: "Other"}, +} + +# Other variables to include +other_vars = ["white", "mixed", "asian", "black", "other"] +other_vars_combined = [x + "_" + y for x in definitions for y in other_vars] + +# Restrict to registered as of index date +registered = True +reg = "registered" + +# Dates +dates = False +date_min = "" +date_max = "" +time_delta = "" + +# Min/max range +min_range = 4 +max_range = 200 + +# Null value – could be multiple values in a list [0,'0',NA] +null = [0, "0"] + +# Covariates +demographic_covariates = ["age_band", "sex", "region", "imd"] +clinical_covariates = ["dementia", "diabetes", "hypertension", "learning_disability"] + +# Output filepath +output_path = "phenotype_validation_ethnicity/5" +if registered == True: + output_path = output_path + "/registered" + +########################## SPECIFY ANALYSES TO RUN HERE ############################## + + +def main(): + # combine defintions and other_vars + df_clean = import_clean( + input_path, + definitions, + other_vars_combined, + demographic_covariates, + clinical_covariates, + reg, + null, + date_min, + date_max, + time_delta, + output_path, + code_dict, + dates, + registered, + ) + # Count patients with records + patient_counts( + df_clean, definitions, demographic_covariates, clinical_covariates, output_path + ) + # Count patients without records + patient_counts( + df_clean, + definitions, + demographic_covariates, + clinical_covariates, + output_path, + missing=True, + ) + # Count patients by categories + patient_counts( + df_clean, + definitions, + demographic_covariates, + clinical_covariates, + output_path, + code_dict, + categories=True, + ) + # Generate heatmap of overlapping definitions + display_heatmap(df_clean, definitions, output_path) + # Latest v most common + latest_common_comparison( + df_clean, definitions, other_vars_combined, output_path, code_dict + ) + # State change + state_change(df_clean, definitions, other_vars_combined, output_path, code_dict) + + +########################## DO NOT EDIT – RUNS SCRIPT ############################## + +if __name__ == "__main__": + main() diff --git a/ethnicity-short-data-report.Rproj b/ethnicity-short-data-report.Rproj new file mode 100644 index 0000000..8e3c2eb --- /dev/null +++ b/ethnicity-short-data-report.Rproj @@ -0,0 +1,13 @@ +Version: 1.0 + +RestoreWorkspace: Default +SaveWorkspace: Default +AlwaysSaveHistory: Default + +EnableCodeIndexing: Yes +UseSpacesForTab: Yes +NumSpacesForTab: 2 +Encoding: UTF-8 + +RnwWeave: Sweave +LaTeX: pdfLaTeX diff --git a/local/local_report_ethnicity.html b/local/local_report_ethnicity.html new file mode 100644 index 0000000..4808f3a --- /dev/null +++ b/local/local_report_ethnicity.html @@ -0,0 +1,2301 @@ +
+
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Identifying Ethnicity in OpenSAFELY-TPP

This short report describes how ethnicity can be identified in the OpenSAFELY-TPP database, and the strengths and weaknesses of the methods. This is a living document that will be updated to reflect changes to the OpenSAFELY-TPP database and the patient records within.

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OpenSAFELY

OpenSAFELY is an analytics platform for conducting analyses on Electronic Health Records inside the secure environment where the records are held. This has multiple benefits:

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  • We don't transport large volumes of potentially disclosive pseudonymised patient data outside of the secure environments for analysis
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  • Analyses can run in near real-time as records are ready for analysis as soon as they appear in the secure environment
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  • All infrastructure and analysis code is stored in GitHub repositories, which are open for security review, scientific review, and re-use
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A key feature of OpenSAFELY is the use of study definitions, which are formal specifications of the datasets to be generated from the OpenSAFELY database. This takes care of much of the complex EHR data wrangling required to create a dataset in an analysis-ready format. It also creates a library of standardised and validated variable definitions that can be deployed consistently across multiple projects.

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The purpose of this report is to describe all such variables that relate to BMI, their relative strengths and weaknesses, in what scenarios they are best deployed. It will also describe potential future definitions that have not yet been implemented.

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Available Records

OpenSAFELY-TPP runs inside TPP’s data centre which contains the primary care records for all patients registered at practices using TPP’s SystmOne Clinical Information System. This data centre also imports external datasets from other sources, including A&E attendances and hospital admissions from NHS Digital’s Secondary Use Service, and death registrations from the ONS. More information on available data sources can be found within the OpenSAFELY documentation.

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Results

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Count of Patients

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+ +
+ + +
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
ethnicity 5ethnicity new 5ethnicity primis 5all filledpopulation
groupsubgroup
allwith records18,790,805 (75.9)18,530,915 (74.8)14,720,945 (59.5)14,553,495 (58.8)24,759,210
age_band0-193,381,570 (62.2)3,334,345 (61.3)2,544,310 (46.8)2,517,290 (46.3)5,440,370
20-292,199,015 (71.5)2,167,945 (70.5)1,740,630 (56.6)1,721,060 (56.0)3,075,485
30-392,894,890 (81.4)2,849,200 (80.1)2,320,895 (65.3)2,290,445 (64.4)3,556,090
40-492,633,005 (82.6)2,590,355 (81.2)2,102,885 (65.9)2,074,975 (65.1)3,189,535
50-592,751,205 (81.1)2,714,830 (80.0)2,178,465 (64.2)2,154,310 (63.5)3,393,090
60-692,204,255 (81.6)2,178,125 (80.6)1,734,830 (64.2)1,717,145 (63.6)2,700,745
70-791,777,240 (82.0)1,757,045 (81.1)1,388,000 (64.0)1,374,140 (63.4)2,167,505
80+949,620 (76.8)939,070 (76.0)710,920 (57.5)704,130 (57.0)1,236,385
missing- (-)- (-)- (-)- (-)-
sexF9,588,050 (77.6)9,456,460 (76.5)7,561,910 (61.2)7,475,670 (60.5)12,358,905
M9,202,755 (74.2)9,074,455 (73.2)7,159,035 (57.7)7,077,825 (57.1)12,400,305
regionEast4,354,510 (75.6)4,294,100 (74.6)3,380,420 (58.7)3,344,085 (58.1)5,758,535
East Midlands3,262,875 (76.6)3,208,865 (75.3)2,507,680 (58.9)2,472,405 (58.0)4,260,350
London1,436,215 (80.0)1,409,285 (78.5)1,262,330 (70.4)1,243,690 (69.3)1,794,330
North East888,240 (76.1)881,040 (75.5)739,970 (63.4)734,745 (63.0)1,166,440
North West1,621,780 (76.0)1,603,115 (75.1)1,193,320 (55.9)1,183,135 (55.4)2,134,525
South East1,216,550 (74.0)1,199,055 (72.9)939,735 (57.2)928,370 (56.5)1,643,790
South West2,481,280 (73.0)2,454,175 (72.2)1,886,215 (55.5)1,868,945 (55.0)3,399,525
West Midlands811,275 (80.2)794,275 (78.6)616,410 (61.0)605,155 (59.9)1,010,960
Yorkshire and The Humber2,688,860 (75.7)2,658,015 (74.8)2,170,395 (61.1)2,148,670 (60.5)3,552,510
imd1 Most deprived3,767,715 (76.7)3,706,605 (75.5)2,997,945 (61.0)2,959,970 (60.3)4,912,170
23,685,435 (76.3)3,631,645 (75.2)2,916,800 (60.4)2,881,840 (59.7)4,827,185
33,905,945 (76.6)3,854,535 (75.6)3,051,880 (59.8)3,017,565 (59.2)5,101,075
43,624,320 (75.7)3,575,900 (74.7)2,823,445 (59.0)2,791,835 (58.3)4,786,525
5 Least deprived3,278,295 (75.0)3,239,820 (74.1)2,514,910 (57.5)2,490,660 (57.0)4,372,945
Unknown529,095 (69.7)522,405 (68.8)415,965 (54.8)411,620 (54.2)759,310
dementiaFalse18,755,940 (75.9)18,496,520 (74.8)14,693,790 (59.5)14,526,675 (58.8)24,715,715
True34,870 (80.2)34,395 (79.1)27,150 (62.4)26,820 (61.7)43,495
diabetesFalse16,839,640 (75.1)16,607,460 (74.1)13,170,370 (58.8)13,022,125 (58.1)22,411,230
True1,951,165 (83.1)1,923,450 (81.9)1,550,570 (66.0)1,531,370 (65.2)2,347,985
hypertensionFalse17,267,100 (75.3)17,024,630 (74.3)13,531,795 (59.0)13,375,890 (58.4)22,923,500
True1,523,705 (83.0)1,506,285 (82.1)1,189,145 (64.8)1,177,605 (64.1)1,835,710
learning_disabilityFalse18,674,915 (75.9)18,417,480 (74.8)14,626,460 (59.4)14,460,900 (58.7)24,618,430
True115,890 (82.3)113,435 (80.6)94,485 (67.1)92,595 (65.8)140,780
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Count of Missings

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+ + +
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+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
ethnicity 5ethnicity new 5ethnicity primis 5all missingpopulation
groupsubgroup
allwith records5,968,405 (24.1)6,228,295 (25.2)10,038,265 (40.5)5,968,405 (24.1)24,759,210
age_band0-192,058,800 (37.8)2,106,025 (38.7)2,896,060 (53.2)2,058,795 (37.8)5,440,370
20-29876,470 (28.5)907,540 (29.5)1,334,855 (43.4)876,470 (28.5)3,075,485
30-39661,200 (18.6)706,890 (19.9)1,235,195 (34.7)661,205 (18.6)3,556,090
40-49556,530 (17.4)599,180 (18.8)1,086,650 (34.1)556,530 (17.4)3,189,535
50-59641,885 (18.9)678,260 (20.0)1,214,625 (35.8)641,885 (18.9)3,393,090
60-69496,490 (18.4)522,620 (19.4)965,915 (35.8)496,490 (18.4)2,700,745
70-79390,265 (18.0)410,460 (18.9)779,505 (36.0)390,265 (18.0)2,167,505
80+286,765 (23.2)297,315 (24.0)525,465 (42.5)286,760 (23.2)1,236,385
missing- (-)- (-)- (-)- (-)-
sexF2,770,855 (22.4)2,902,445 (23.5)4,796,995 (38.8)2,770,855 (22.4)12,358,905
M3,197,550 (25.8)3,325,850 (26.8)5,241,270 (42.3)3,197,550 (25.8)12,400,305
regionEast1,404,025 (24.4)1,464,435 (25.4)2,378,115 (41.3)1,404,020 (24.4)5,758,535
East Midlands997,475 (23.4)1,051,485 (24.7)1,752,670 (41.1)997,470 (23.4)4,260,350
London358,115 (20.0)385,045 (21.5)532,000 (29.6)358,115 (20.0)1,794,330
North East278,200 (23.9)285,400 (24.5)426,470 (36.6)278,200 (23.9)1,166,440
North West512,745 (24.0)531,410 (24.9)941,205 (44.1)512,745 (24.0)2,134,525
South East427,240 (26.0)444,735 (27.1)704,055 (42.8)427,245 (26.0)1,643,790
South West918,245 (27.0)945,350 (27.8)1,513,310 (44.5)918,245 (27.0)3,399,525
West Midlands199,685 (19.8)216,685 (21.4)394,550 (39.0)199,685 (19.8)1,010,960
Yorkshire and The Humber863,650 (24.3)894,495 (25.2)1,382,115 (38.9)863,655 (24.3)3,552,510
imd1 Most deprived1,144,455 (23.3)1,205,565 (24.5)1,914,225 (39.0)1,144,455 (23.3)4,912,170
21,141,750 (23.7)1,195,540 (24.8)1,910,385 (39.6)1,141,755 (23.7)4,827,185
31,195,130 (23.4)1,246,540 (24.4)2,049,195 (40.2)1,195,130 (23.4)5,101,075
41,162,205 (24.3)1,210,625 (25.3)1,963,080 (41.0)1,162,205 (24.3)4,786,525
5 Least deprived1,094,650 (25.0)1,133,125 (25.9)1,858,035 (42.5)1,094,650 (25.0)4,372,945
Unknown230,215 (30.3)236,905 (31.2)343,345 (45.2)230,215 (30.3)759,310
dementiaFalse5,959,775 (24.1)6,219,195 (25.2)10,021,925 (40.5)5,959,775 (24.1)24,715,715
True8,625 (19.8)9,100 (20.9)16,345 (37.6)8,630 (19.8)43,495
diabetesFalse5,571,590 (24.9)5,803,770 (25.9)9,240,860 (41.2)5,571,585 (24.9)22,411,230
True396,820 (16.9)424,535 (18.1)797,415 (34.0)396,820 (16.9)2,347,985
hypertensionFalse5,656,400 (24.7)5,898,870 (25.7)9,391,705 (41.0)5,656,400 (24.7)22,923,500
True312,005 (17.0)329,425 (17.9)646,565 (35.2)312,005 (17.0)1,835,710
learning_disabilityFalse5,943,515 (24.1)6,200,950 (25.2)9,991,970 (40.6)5,943,515 (24.1)24,618,430
True24,890 (17.7)27,345 (19.4)46,295 (32.9)24,890 (17.7)140,780
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Count by Category

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+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
White ethnicity 5White ethnicity new 5White ethnicity primis 5Mixed ethnicity 5Mixed ethnicity new 5Mixed ethnicity primis 5Asian ethnicity 5Asian ethnicity new 5Asian ethnicity primis 5Black ethnicity 5Black ethnicity new 5Black ethnicity primis 5Other ethnicity 5Other ethnicity new 5Other ethnicity primis 5all filledpopulation
groupsubgroup
allwith records15,688,375 (63.4)15,527,840 (62.7)12,089,635 (48.8)351,745 (1.4)347,180 (1.4)318,515 (1.3)1,635,560 (6.6)1,643,485 (6.6)1,424,905 (5.8)566,150 (2.3)559,260 (2.3)443,960 (1.8)548,975 (2.2)453,150 (1.8)443,930 (1.8)14,553,495 (58.8)24,759,210
age_band0-192,641,455 (48.6)2,616,335 (48.1)1,932,120 (35.5)130,570 (2.4)129,015 (2.4)112,015 (2.1)368,200 (6.8)369,085 (6.8)315,320 (5.8)134,080 (2.5)132,540 (2.4)100,425 (1.8)107,270 (2.0)87,370 (1.6)84,430 (1.6)2,517,290 (46.3)5,440,370
20-291,688,385 (54.9)1,672,960 (54.4)1,308,290 (42.5)59,725 (1.9)59,060 (1.9)53,995 (1.8)246,700 (8.0)248,050 (8.1)210,565 (6.8)83,950 (2.7)82,960 (2.7)65,885 (2.1)120,255 (3.9)104,915 (3.4)101,895 (3.3)1,721,060 (56.0)3,075,485
30-392,265,530 (63.7)2,242,170 (63.1)1,784,645 (50.2)61,640 (1.7)60,795 (1.7)57,155 (1.6)349,145 (9.8)350,505 (9.9)302,750 (8.5)99,530 (2.8)98,315 (2.8)78,595 (2.2)119,040 (3.3)97,415 (2.7)97,755 (2.7)2,290,445 (64.4)3,556,090
40-492,088,765 (65.5)2,064,985 (64.7)1,633,995 (51.2)44,995 (1.4)44,290 (1.4)42,830 (1.3)302,295 (9.5)304,160 (9.5)267,920 (8.4)101,920 (3.2)100,550 (3.2)81,755 (2.6)95,030 (3.0)76,370 (2.4)76,385 (2.4)2,074,975 (65.1)3,189,535
50-592,407,755 (71.0)2,382,075 (70.2)1,883,095 (55.5)30,900 (0.9)30,465 (0.9)29,470 (0.9)173,465 (5.1)175,235 (5.2)155,315 (4.6)82,805 (2.4)81,805 (2.4)66,590 (2.0)56,280 (1.7)45,250 (1.3)44,000 (1.3)2,154,310 (63.5)3,393,090
60-692,007,925 (74.3)1,987,505 (73.6)1,566,360 (58.0)14,820 (0.5)14,605 (0.5)14,300 (0.5)112,090 (4.2)112,520 (4.2)99,315 (3.7)38,890 (1.4)38,410 (1.4)31,045 (1.1)30,535 (1.1)25,085 (0.9)23,810 (0.9)1,717,145 (63.6)2,700,745
70-791,686,405 (77.8)1,668,940 (77.0)1,310,290 (60.5)6,040 (0.3)5,945 (0.3)5,780 (0.3)55,895 (2.6)56,195 (2.6)49,475 (2.3)14,310 (0.7)14,140 (0.7)11,355 (0.5)14,590 (0.7)11,820 (0.5)11,100 (0.5)1,374,140 (63.4)2,167,505
80+902,150 (73.0)892,870 (72.2)670,840 (54.3)3,055 (0.2)3,005 (0.2)2,965 (0.2)27,775 (2.2)27,725 (2.2)24,245 (2.0)10,670 (0.9)10,540 (0.9)8,320 (0.7)5,975 (0.5)4,925 (0.4)4,550 (0.4)704,130 (57.0)1,236,385
missing- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)-
sexF8,066,950 (65.3)7,983,705 (64.6)6,266,475 (50.7)178,250 (1.4)175,945 (1.4)162,385 (1.3)790,030 (6.4)796,285 (6.4)692,985 (5.6)282,470 (2.3)279,060 (2.3)222,930 (1.8)270,345 (2.2)221,465 (1.8)217,130 (1.8)7,475,670 (60.5)12,358,905
M7,621,425 (61.5)7,544,135 (60.8)5,823,160 (47.0)173,495 (1.4)171,235 (1.4)156,130 (1.3)845,530 (6.8)847,200 (6.8)731,920 (5.9)283,680 (2.3)280,200 (2.3)221,030 (1.8)278,625 (2.2)231,685 (1.9)226,800 (1.8)7,077,825 (57.1)12,400,305
regionEast3,727,865 (64.7)3,690,895 (64.1)2,862,225 (49.7)87,280 (1.5)86,240 (1.5)79,910 (1.4)287,525 (5.0)289,030 (5.0)245,825 (4.3)143,215 (2.5)141,535 (2.5)107,365 (1.9)108,620 (1.9)86,400 (1.5)85,090 (1.5)3,344,085 (58.1)5,758,535
East Midlands2,723,075 (63.9)2,684,890 (63.0)2,063,355 (48.4)58,275 (1.4)57,530 (1.4)51,365 (1.2)308,710 (7.2)308,740 (7.2)258,085 (6.1)94,665 (2.2)93,730 (2.2)72,590 (1.7)78,155 (1.8)63,975 (1.5)62,285 (1.5)2,472,405 (58.0)4,260,350
London756,705 (42.2)748,675 (41.7)663,330 (37.0)58,730 (3.3)57,885 (3.2)54,770 (3.1)351,885 (19.6)357,290 (19.9)318,055 (17.7)120,545 (6.7)118,860 (6.6)101,125 (5.6)148,350 (8.3)126,580 (7.1)125,050 (7.0)1,243,690 (69.3)1,794,330
North East786,490 (67.4)782,280 (67.1)649,465 (55.7)12,900 (1.1)12,790 (1.1)11,845 (1.0)46,910 (4.0)46,970 (4.0)41,940 (3.6)19,435 (1.7)19,310 (1.7)16,580 (1.4)22,510 (1.9)19,690 (1.7)20,135 (1.7)734,745 (63.0)1,166,440
North West1,499,990 (70.3)1,485,595 (69.6)1,097,660 (51.4)13,695 (0.6)13,520 (0.6)12,350 (0.6)65,015 (3.0)65,340 (3.1)50,855 (2.4)16,770 (0.8)16,600 (0.8)12,285 (0.6)26,315 (1.2)22,060 (1.0)20,170 (0.9)1,183,135 (55.4)2,134,525
South East1,079,900 (65.7)1,068,405 (65.0)826,950 (50.3)22,840 (1.4)22,555 (1.4)20,090 (1.2)55,655 (3.4)56,925 (3.5)47,440 (2.9)22,880 (1.4)22,530 (1.4)17,540 (1.1)35,280 (2.1)28,645 (1.7)27,710 (1.7)928,370 (56.5)1,643,790
South West2,320,400 (68.3)2,300,960 (67.7)1,752,845 (51.6)30,835 (0.9)30,360 (0.9)27,770 (0.8)64,835 (1.9)66,095 (1.9)55,195 (1.6)23,530 (0.7)23,230 (0.7)18,060 (0.5)41,675 (1.2)33,525 (1.0)32,340 (1.0)1,868,945 (55.0)3,399,525
West Midlands522,795 (51.7)514,440 (50.9)380,410 (37.6)28,005 (2.8)27,580 (2.7)24,435 (2.4)166,450 (16.5)164,490 (16.3)139,655 (13.8)63,605 (6.3)62,460 (6.2)48,660 (4.8)30,425 (3.0)25,305 (2.5)23,250 (2.3)605,155 (59.9)1,010,960
Yorkshire and The Humber2,247,105 (63.3)2,227,770 (62.7)1,773,495 (49.9)38,245 (1.1)37,785 (1.1)35,080 (1.0)286,225 (8.1)286,255 (8.1)265,755 (7.5)60,275 (1.7)59,780 (1.7)48,720 (1.4)57,010 (1.6)46,420 (1.3)47,345 (1.3)2,148,670 (60.5)3,552,510
imd1 Most deprived2,777,390 (56.5)2,748,310 (55.9)2,154,430 (43.9)96,085 (2.0)94,905 (1.9)87,125 (1.8)531,855 (10.8)531,540 (10.8)466,965 (9.5)225,140 (4.6)222,430 (4.5)178,125 (3.6)137,245 (2.8)109,420 (2.2)111,300 (2.3)2,959,970 (60.3)4,912,170
22,901,255 (60.1)2,870,335 (59.5)2,248,135 (46.6)76,110 (1.6)75,135 (1.6)69,735 (1.4)442,855 (9.2)445,290 (9.2)386,845 (8.0)139,405 (2.9)137,720 (2.9)109,635 (2.3)125,810 (2.6)103,160 (2.1)102,450 (2.1)2,881,840 (59.7)4,827,185
33,339,005 (65.5)3,304,760 (64.8)2,570,110 (50.4)66,860 (1.3)65,930 (1.3)60,210 (1.2)303,775 (6.0)305,715 (6.0)264,420 (5.2)89,850 (1.8)88,845 (1.7)70,300 (1.4)106,450 (2.1)89,290 (1.8)86,835 (1.7)3,017,565 (59.2)5,101,075
43,237,445 (67.6)3,202,855 (66.9)2,496,975 (52.2)55,550 (1.2)54,800 (1.1)50,490 (1.1)182,615 (3.8)184,685 (3.9)157,775 (3.3)56,660 (1.2)55,895 (1.2)43,595 (0.9)92,055 (1.9)77,670 (1.6)74,605 (1.6)2,791,835 (58.3)4,786,525
5 Least deprived2,997,850 (68.6)2,969,875 (67.9)2,283,145 (52.2)45,025 (1.0)44,425 (1.0)40,005 (0.9)131,970 (3.0)133,390 (3.1)111,980 (2.6)35,700 (0.8)35,205 (0.8)27,170 (0.6)67,750 (1.5)56,930 (1.3)52,605 (1.2)2,490,660 (57.0)4,372,945
Unknown435,435 (57.3)431,705 (56.9)336,840 (44.4)12,115 (1.6)11,990 (1.6)10,950 (1.4)42,485 (5.6)42,860 (5.6)36,915 (4.9)19,395 (2.6)19,170 (2.5)15,130 (2.0)19,665 (2.6)16,680 (2.2)16,135 (2.1)411,620 (54.2)759,310
dementiaFalse15,655,750 (63.3)15,495,620 (62.7)12,064,415 (48.8)351,590 (1.4)347,030 (1.4)318,375 (1.3)1,634,285 (6.6)1,642,220 (6.6)1,423,760 (5.8)565,540 (2.3)558,660 (2.3)443,475 (1.8)548,775 (2.2)452,990 (1.8)443,760 (1.8)14,526,675 (58.8)24,715,715
True32,630 (75.0)32,220 (74.1)25,220 (58.0)155 (0.4)150 (0.3)140 (0.3)1,275 (2.9)1,265 (2.9)1,145 (2.6)610 (1.4)600 (1.4)485 (1.1)200 (0.5)160 (0.4)165 (0.4)26,820 (61.7)43,495
diabetesFalse14,136,400 (63.1)13,993,700 (62.4)10,887,840 (48.6)328,735 (1.5)324,500 (1.4)296,290 (1.3)1,370,740 (6.1)1,378,605 (6.2)1,187,975 (5.3)494,765 (2.2)488,755 (2.2)385,450 (1.7)509,005 (2.3)421,900 (1.9)412,815 (1.8)13,022,125 (58.1)22,411,230
True1,551,975 (66.1)1,534,140 (65.3)1,201,795 (51.2)23,015 (1.0)22,680 (1.0)22,225 (0.9)264,815 (11.3)264,880 (11.3)236,930 (10.1)71,390 (3.0)70,505 (3.0)58,510 (2.5)39,970 (1.7)31,250 (1.3)31,110 (1.3)1,531,370 (65.2)2,347,985
hypertensionFalse14,298,795 (62.4)14,151,890 (61.7)11,014,750 (48.1)341,155 (1.5)336,730 (1.5)308,160 (1.3)1,562,375 (6.8)1,569,875 (6.8)1,360,195 (5.9)531,740 (2.3)525,290 (2.3)416,805 (1.8)533,030 (2.3)440,845 (1.9)431,890 (1.9)13,375,890 (58.4)22,923,500
True1,389,580 (75.7)1,375,950 (75.0)1,074,885 (58.6)10,590 (0.6)10,450 (0.6)10,355 (0.6)73,180 (4.0)73,610 (4.0)64,710 (3.5)34,410 (1.9)33,970 (1.9)27,160 (1.5)15,945 (0.9)12,305 (0.7)12,040 (0.7)1,177,605 (64.1)1,835,710
learning_disabilityFalse15,586,390 (63.3)15,427,860 (62.7)12,007,185 (48.8)349,870 (1.4)345,345 (1.4)316,835 (1.3)1,627,420 (6.6)1,635,435 (6.6)1,417,610 (5.8)563,495 (2.3)556,650 (2.3)441,855 (1.8)547,735 (2.2)452,195 (1.8)442,975 (1.8)14,460,900 (58.7)24,618,430
True101,985 (72.4)99,985 (71.0)82,450 (58.6)1,875 (1.3)1,835 (1.3)1,680 (1.2)8,140 (5.8)8,045 (5.7)7,300 (5.2)2,655 (1.9)2,610 (1.9)2,105 (1.5)1,240 (0.9)955 (0.7)955 (0.7)92,595 (65.8)140,780
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Overlapping Definitions

Idea: Use an upset plot

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Latest vs. Most Common

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matching (97.7%)not matching (2.3%)
ethnicity_5
White15,659,180120,390
Mixed320,63097,065
Asian1,620,80067,475
Black554,27050,015
Other511,965113,510
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whitemixedasianblackother
ethnicity_5
White15,659,180 (99.2)33,375 (0.2)22,815 (0.1)16,445 (0.1)47,755 (0.3)
Mixed44,460 (10.6)320,630 (76.8)13,760 (3.3)25,335 (6.1)13,510 (3.2)
Asian20,275 (1.2)11,670 (0.7)1,620,800 (96.0)4,310 (0.3)31,220 (1.8)
Black18,725 (3.1)19,555 (3.2)4,120 (0.7)554,270 (91.7)7,615 (1.3)
Other60,880 (9.7)12,705 (2.0)31,740 (5.1)8,185 (1.3)511,965 (81.9)
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matching (97.9%)not matching (2.1%)
ethnicity_new_5
White15,503,455109,315
Mixed316,98095,175
Asian1,631,90560,005
Black548,76047,935
Other426,06586,650
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whitemixedasianblackother
ethnicity_new_5
White15,503,455 (99.3)32,815 (0.2)23,000 (0.1)16,350 (0.1)37,150 (0.2)
Mixed44,685 (10.8)316,980 (76.9)14,240 (3.5)25,515 (6.2)10,735 (2.6)
Asian20,615 (1.2)11,870 (0.7)1,631,905 (96.5)4,320 (0.3)23,200 (1.4)
Black18,615 (3.1)19,035 (3.2)4,140 (0.7)548,760 (92.0)6,145 (1.0)
Other48,330 (9.4)9,780 (1.9)21,970 (4.3)6,570 (1.3)426,065 (83.1)
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matching (98.0%)not matching (2.0%)
ethnicity_primis_5
White12,072,86585,855
Mixed299,27570,205
Asian1,417,27043,515
Black436,62535,915
Other424,80067,310
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whitemixedasianblackother
ethnicity_primis_5
White12,072,865 (99.3)25,145 (0.2)17,615 (0.1)11,510 (0.1)31,585 (0.3)
Mixed32,680 (8.8)299,275 (81.0)10,740 (2.9)17,655 (4.8)9,130 (2.5)
Asian16,195 (1.1)8,765 (0.6)1,417,270 (97.0)2,555 (0.2)16,000 (1.1)
Black13,555 (2.9)15,015 (3.2)2,620 (0.6)436,625 (92.4)4,725 (1.0)
Other35,500 (7.2)8,725 (1.8)17,960 (3.6)5,125 (1.0)424,800 (86.3)
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State Change

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whitemixedasianblackother
ethnicity_5
White: 15,688,37515,688,375 (100.0)58,750 (0.4)30,130 (0.2)24,200 (0.2)96,430 (0.6)
Mixed: 351,74558,850 (16.7)351,745 (100.0)17,010 (4.8)32,020 (9.1)18,745 (5.3)
Asian: 1,635,56039,635 (2.4)23,720 (1.5)1,635,560 (100.0)8,225 (0.5)53,160 (3.3)
Black: 566,15031,120 (5.5)38,855 (6.9)6,340 (1.1)566,150 (100.0)13,445 (2.4)
Other: 548,97572,775 (13.3)20,210 (3.7)43,470 (7.9)11,030 (2.0)548,975 (100.0)
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whitemixedasianblackother
ethnicity_new_5
White: 15,527,84015,527,840 (100.0)58,125 (0.4)30,205 (0.2)23,900 (0.2)76,290 (0.5)
Mixed: 347,18058,265 (16.8)347,180 (100.0)17,245 (5.0)31,710 (9.1)14,685 (4.2)
Asian: 1,643,48540,075 (2.4)24,225 (1.5)1,643,485 (100.0)8,220 (0.5)38,145 (2.3)
Black: 559,26030,785 (5.5)38,555 (6.9)6,310 (1.1)559,260 (100.0)10,750 (1.9)
Other: 453,15056,425 (12.5)15,170 (3.3)30,005 (6.6)8,665 (1.9)453,150 (100.0)
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whitemixedasianblackother
ethnicity_primis_5
White: 12,089,63512,089,635 (100.0)39,135 (0.3)22,110 (0.2)15,390 (0.1)55,195 (0.5)
Mixed: 318,51541,310 (13.0)318,515 (100.0)12,655 (4.0)21,205 (6.7)11,615 (3.6)
Asian: 1,424,90528,425 (2.0)15,625 (1.1)1,424,905 (100.0)4,200 (0.3)24,390 (1.7)
Black: 443,96019,815 (4.5)25,325 (5.7)3,815 (0.9)443,960 (100.0)7,415 (1.7)
Other: 443,93041,500 (9.3)12,500 (2.8)23,345 (5.3)6,595 (1.5)443,930 (100.0)
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+ +
+ + diff --git a/logs/00_trim_snomed_codelist.log b/logs/00_trim_snomed_codelist.log index a19305e..2dfc2c0 100644 --- a/logs/00_trim_snomed_codelist.log +++ b/logs/00_trim_snomed_codelist.log @@ -2,7 +2,7 @@ name: log: /workspace/logs/00_trim_snomed_codelist.log log type: text - opened on: 2 Sep 2021, 18:41:12 + opened on: 16 Mar 2022, 10:47:37 . . import delimited ./codelists/opensafely-ethnicity-uk-categories.csv, clear @@ -99,5 +99,5 @@ file ./codelists/group10.csv saved name: log: /workspace/logs/00_trim_snomed_codelist.log log type: text - closed on: 2 Sep 2021, 18:41:15 + closed on: 16 Mar 2022, 10:47:38 ------------------------------------------------------------------------------- diff --git a/logs/01_describe_snomed_ethnicity.log b/logs/01_describe_snomed_ethnicity.log index b445a21..97c2790 100644 --- a/logs/01_describe_snomed_ethnicity.log +++ b/logs/01_describe_snomed_ethnicity.log @@ -1,14 +1,12 @@ -------------------------------------------------------------- +------------------------------------------------------------------------------- name: - log: /Users/lsh152058/Desktop/GitHub/ethnicity-short- -> data-report/logs/01_describe_snomed_ethnicity.log + log: /workspace/logs/01_describe_snomed_ethnicity.log log type: text - opened on: 8 Sep 2021, 12:51:05 + opened on: 16 Mar 2022, 10:48:11 . . *create stata version of codelists for merging -. import delimited ./codelists/opensafely-ethnicity-uk-catego -> ries.csv, clear +. import delimited ./codelists/opensafely-ethnicity-uk-categories.csv, clear (2 vars, 610 obs) . format code %20.0f @@ -16,10 +14,9 @@ . tostring code, gen(snomedcode) format(%20.0g) snomedcode generated as str16 -. save ./output/opensafely-ethnicity-uk-categories_formerge.d -> ta, replace -file ./output/opensafely-ethnicity-uk-categories_formerge.dta -> saved +. save ./output/opensafely-ethnicity-uk-categories_formerge.dta, replace +(note: file ./output/opensafely-ethnicity-uk-categories_formerge.dta not found) +file ./output/opensafely-ethnicity-uk-categories_formerge.dta saved . . clear @@ -32,6 +29,7 @@ file ./output/opensafely-ethnicity-uk-categories_formerge.dta . gen group=1 . save ./output/input1.dta, replace +(note: file ./output/input1.dta not found) file ./output/input1.dta saved . @@ -41,22 +39,31 @@ file ./output/input1.dta saved 4. save ./output/input`i'.dta, replace 5. } (66 vars, 1,000 obs) +(note: file ./output/input2.dta not found) file ./output/input2.dta saved (66 vars, 1,000 obs) +(note: file ./output/input3.dta not found) file ./output/input3.dta saved (66 vars, 1,000 obs) +(note: file ./output/input4.dta not found) file ./output/input4.dta saved (66 vars, 1,000 obs) +(note: file ./output/input5.dta not found) file ./output/input5.dta saved (66 vars, 1,000 obs) +(note: file ./output/input6.dta not found) file ./output/input6.dta saved (66 vars, 1,000 obs) +(note: file ./output/input7.dta not found) file ./output/input7.dta saved (66 vars, 1,000 obs) +(note: file ./output/input8.dta not found) file ./output/input8.dta saved (66 vars, 1,000 obs) +(note: file ./output/input9.dta not found) file ./output/input9.dta saved (66 vars, 1,000 obs) +(note: file ./output/input10.dta not found) file ./output/input10.dta saved . @@ -75,40 +82,35 @@ file ./output/input10.dta saved 8. tostring snomedcode, replace format(%20.0g) 9. . *merge with codelist for descriptors -. merge 1:1 snomedcode using ./output/opensafely-ethn -> icity-uk-categories_formerge.dta, keep(match) +. merge 1:1 snomedcode using ./output/opensafely-ethnicity-uk-categorie +> s_formerge.dta, keep(match) 10. . gen include=0 11. replace include=1 if _merge==3 12. replace include=0 if snomedcode_count==0 13. tab include 14. drop code - 15. save ./output/snomed_ethnicity_count_`i'.dta, re -> place + 15. save ./output/snomed_ethnicity_count_`i'.dta, replace 16. } -(note: j = 1340002 1451003 10008004 10117001 10292001 1043200 -> 1 11794009 12556008 13233008 13440006 14045001 14176005 144 -> 70009 14999008 15086000 108342005 113169009 113170005 11317 -> 1009 139955009 139960008 154159009 154160004 154161000 1541 -> 62007 154163002 154164008 154165009 154166005 154167001 154 -> 168006 154169003 154170002 154171003 154172005 154173000 15 -> 4174006 154175007 154176008 154177004 154178009 154179001 1 -> 54180003 154181004 154182006 107691000000105 11040100000010 -> 3 110751000000108 110761000000106 110771000000104 110781000 -> 000102 110791000000100 110831000000107 1024701000000100 103 -> 6211000000103 1036251000000104 1036281000000105 10363010000 -> 00106 1036321000000102 1036341000000109 1036361000000105) +(note: j = 1340002 1451003 10008004 10117001 10292001 10432001 11794009 1255600 +> 8 13233008 13440006 14045001 14176005 14470009 14999008 15086000 108342005 11 +> 3169009 113170005 113171009 139955009 139960008 154159009 154160004 154161000 +> 154162007 154163002 154164008 154165009 154166005 154167001 154168006 154169 +> 003 154170002 154171003 154172005 154173000 154174006 154175007 154176008 154 +> 177004 154178009 154179001 154180003 154181004 154182006 107691000000105 1104 +> 01000000103 110751000000108 110761000000106 110771000000104 110781000000102 1 +> 10791000000100 110831000000107 1024701000000100 1036211000000103 103625100000 +> 0104 1036281000000105 1036301000000106 1036321000000102 1036341000000109 1036 +> 361000000105) Data wide -> long -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- Number of obs. 1 -> 61 Number of variables 63 -> 4 j variable (61 values) -> snomedcode xij variables: eth_1340002 eth_1451003 ... eth_1036361000000105->eth_ -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- snomedcode was double now str16 Result # of obs. @@ -124,32 +126,28 @@ snomedcode was double now str16 1 | 61 100.00 100.00 ------------+----------------------------------- Total | 61 100.00 +(note: file ./output/snomed_ethnicity_count_1.dta not found) file ./output/snomed_ethnicity_count_1.dta saved -(note: j = 15801006 17095009 17789004 18167009 18575005 18583 -> 004 154183001 154184007 154185008 154186009 154187000 15418 -> 8005 154189002 154190006 154191005 154192003 154193008 1541 -> 94002 154195001 154196000 154197009 154198004 154199007 154 -> 200005 154201009 154202002 154203007 154204001 154205000 15 -> 4206004 154207008 154208003 154209006 154210001 154211002 1 -> 54212009 154213004 154214005 154215006 154216007 154217003 -> 154218008 154219000 154220006 154221005 154222003 154223008 -> 154224002 154225001 154226000 154227009 154229007 16053100 -> 6 162730000 162731001 162732008 162734009 162735005 1859830 -> 03 185984009 185985005) +(note: j = 15801006 17095009 17789004 18167009 18575005 18583004 154183001 1541 +> 84007 154185008 154186009 154187000 154188005 154189002 154190006 154191005 1 +> 54192003 154193008 154194002 154195001 154196000 154197009 154198004 15419900 +> 7 154200005 154201009 154202002 154203007 154204001 154205000 154206004 15420 +> 7008 154208003 154209006 154210001 154211002 154212009 154213004 154214005 15 +> 4215006 154216007 154217003 154218008 154219000 154220006 154221005 154222003 +> 154223008 154224002 154225001 154226000 154227009 154229007 160531006 162730 +> 000 162731001 162732008 162734009 162735005 185983003 185984009 185985005) Data wide -> long -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- Number of obs. 1 -> 61 Number of variables 63 -> 4 j variable (61 values) -> snomedcode xij variables: eth_15801006 eth_17095009 ... eth_185985005-> eth_ -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- snomedcode was long now str9 -(note: variable snomedcode was str9, now str16 to - accommodate using data's values) +(note: variable snomedcode was str9, now str16 to accommodate using data's + values) Result # of obs. ----------------------------------------- @@ -164,32 +162,29 @@ snomedcode was long now str9 1 | 61 100.00 100.00 ------------+----------------------------------- Total | 61 100.00 +(note: file ./output/snomed_ethnicity_count_2.dta not found) file ./output/snomed_ethnicity_count_2.dta saved -(note: j = 185986006 185987002 185988007 185989004 185990008 -> 185991007 185992000 185993005 185994004 185995003 185996002 -> 185997006 185998001 185999009 186000006 186001005 18600200 -> 3 186003008 186004002 186005001 186006000 186007009 1860080 -> 04 186009007 186010002 186011003 186012005 186013000 186014 -> 006 186015007 186016008 186017004 186018009 186019001 18602 -> 0007 186021006 186022004 186023009 186024003 186025002 1860 -> 26001 186027005 186028000 186029008 186030003 186031004 186 -> 032006 186033001 186034007 186035008 186036009 186037000 18 -> 6039002 186040000 186041001 186042008 186043003 186044009 1 -> 86045005 186046006 186047002) +(note: j = 185986006 185987002 185988007 185989004 185990008 185991007 18599200 +> 0 185993005 185994004 185995003 185996002 185997006 185998001 185999009 18600 +> 0006 186001005 186002003 186003008 186004002 186005001 186006000 186007009 18 +> 6008004 186009007 186010002 186011003 186012005 186013000 186014006 186015007 +> 186016008 186017004 186018009 186019001 186020007 186021006 186022004 186023 +> 009 186024003 186025002 186026001 186027005 186028000 186029008 186030003 186 +> 031004 186032006 186033001 186034007 186035008 186036009 186037000 186039002 +> 186040000 186041001 186042008 186043003 186044009 186045005 186046006 1860470 +> 02) Data wide -> long -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- Number of obs. 1 -> 61 Number of variables 63 -> 4 j variable (61 values) -> snomedcode xij variables: eth_185986006 eth_185987002 ... eth_186047002->eth_ -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- snomedcode was long now str9 -(note: variable snomedcode was str9, now str16 to - accommodate using data's values) +(note: variable snomedcode was str9, now str16 to accommodate using data's + values) Result # of obs. ----------------------------------------- @@ -204,32 +199,28 @@ snomedcode was long now str9 1 | 61 100.00 100.00 ------------+----------------------------------- Total | 61 100.00 +(note: file ./output/snomed_ethnicity_count_3.dta not found) file ./output/snomed_ethnicity_count_3.dta saved -(note: j = 286009 1919006 2688009 2720008 2852001 18664001 19 -> 085009 19434008 20140003 20291009 20449009 21047009 2186800 -> 6 21993009 22007004 23517005 23534002 23922002 24812003 257 -> 50005 25804004 26215007 27301002 27683006 27700004 28409002 -> 28562006 28796001 28821007 29343004 186048007 268914005 27 -> 0460000 270461001 270462008 270463003 270464009 270465005 2 -> 70466006 270467002 275586009 275587000 275588005 275589002 -> 275590006 275591005 275592003 275593008 275594002 275595001 -> 275596000 275597009 275599007 275600005 275601009 27560200 -> 2 309643000 202171000000101 207971000000101 207981000000104 -> 296841000000102) +(note: j = 286009 1919006 2688009 2720008 2852001 18664001 19085009 19434008 20 +> 140003 20291009 20449009 21047009 21868006 21993009 22007004 23517005 2353400 +> 2 23922002 24812003 25750005 25804004 26215007 27301002 27683006 27700004 284 +> 09002 28562006 28796001 28821007 29343004 186048007 268914005 270460000 27046 +> 1001 270462008 270463003 270464009 270465005 270466006 270467002 275586009 27 +> 5587000 275588005 275589002 275590006 275591005 275592003 275593008 275594002 +> 275595001 275596000 275597009 275599007 275600005 275601009 275602002 309643 +> 000 202171000000101 207971000000101 207981000000104 296841000000102) Data wide -> long -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- Number of obs. 1 -> 61 Number of variables 63 -> 4 j variable (61 values) -> snomedcode xij variables: eth_286009 eth_1919006 ... eth_296841000000102->eth_ -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- snomedcode was double now str15 -(note: variable snomedcode was str15, now str16 to - accommodate using data's values) +(note: variable snomedcode was str15, now str16 to accommodate using data's + values) Result # of obs. ----------------------------------------- @@ -244,32 +235,28 @@ snomedcode was double now str15 1 | 61 100.00 100.00 ------------+----------------------------------- Total | 61 100.00 +(note: file ./output/snomed_ethnicity_count_4.dta not found) file ./output/snomed_ethnicity_count_4.dta saved -(note: j = 3353005 3698008 3818007 4073004 31637002 32045009 -> 32513008 32873005 33182009 33897005 34334001 35007000 36329 -> 002 37474002 37843006 38144004 38361009 38750003 39007007 3 -> 9764005 40165009 40182006 41076003 309644006 312859007 3128 -> 60002 312861003 315236000 315237009 315238004 315239007 315 -> 240009 315279003 315280000 315281001 315282008 315283003 31 -> 5634007 315635008 364699009 365455004 365456003 367505005 3 -> 72148003 393199009 394149000 394635008 397607002 397731000 -> 398089004 401213008 401214002 413465009 413466005 413569000 -> 414152003 414551003 414661004 414978006 41121000000107 354 -> 441000000105) +(note: j = 3353005 3698008 3818007 4073004 31637002 32045009 32513008 32873005 +> 33182009 33897005 34334001 35007000 36329002 37474002 37843006 38144004 38361 +> 009 38750003 39007007 39764005 40165009 40182006 41076003 309644006 312859007 +> 312860002 312861003 315236000 315237009 315238004 315239007 315240009 315279 +> 003 315280000 315281001 315282008 315283003 315634007 315635008 364699009 365 +> 455004 365456003 367505005 372148003 393199009 394149000 394635008 397607002 +> 397731000 398089004 401213008 401214002 413465009 413466005 413569000 4141520 +> 03 414551003 414661004 414978006 41121000000107 354441000000105) Data wide -> long -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- Number of obs. 1 -> 61 Number of variables 63 -> 4 j variable (61 values) -> snomedcode xij variables: eth_3353005 eth_3698008 ... eth_354441000000105->eth_ -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- snomedcode was double now str15 -(note: variable snomedcode was str15, now str16 to - accommodate using data's values) +(note: variable snomedcode was str15, now str16 to accommodate using data's + values) Result # of obs. ----------------------------------------- @@ -284,33 +271,29 @@ snomedcode was double now str15 1 | 61 100.00 100.00 ------------+----------------------------------- Total | 61 100.00 +(note: file ./output/snomed_ethnicity_count_5.dta not found) file ./output/snomed_ethnicity_count_5.dta saved -(note: j = 4299001 6373008 41798002 42632009 43056000 4360800 -> 5 43890005 44460002 45465003 46110004 46723002 47250000 473 -> 27008 48118002 48294008 48375000 48393004 48679001 49202008 -> 50405005 51750002 51827000 52075006 53195006 53460002 5599 -> 0000 56056003 57405008 57539009 58047002 59366001 59487007 -> 59597001 60157000 62598008 63457007 63732001 63736003 64483 -> 007 64693008 65776006 443225003 445343003 43481000000100 44 -> 881000000100 44891000000103 494131000000105 494161000000100 -> 503391000000104 503401000000101 503411000000104 5187010000 -> 00103 518721000000107 519681000000108 583481000000105 58349 -> 1000000107 591311000000105 592491000000104 592501000000105 -> 651601000000100 661731000000107) +(note: j = 4299001 6373008 41798002 42632009 43056000 43608005 43890005 4446000 +> 2 45465003 46110004 46723002 47250000 47327008 48118002 48294008 48375000 483 +> 93004 48679001 49202008 50405005 51750002 51827000 52075006 53195006 53460002 +> 55990000 56056003 57405008 57539009 58047002 59366001 59487007 59597001 6015 +> 7000 62598008 63457007 63732001 63736003 64483007 64693008 65776006 443225003 +> 445343003 43481000000100 44881000000100 44891000000103 494131000000105 49416 +> 1000000100 503391000000104 503401000000101 503411000000104 518701000000103 51 +> 8721000000107 519681000000108 583481000000105 583491000000107 591311000000105 +> 592491000000104 592501000000105 651601000000100 661731000000107) Data wide -> long -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- Number of obs. 1 -> 61 Number of variables 63 -> 4 j variable (61 values) -> snomedcode xij variables: eth_4299001 eth_6373008 ... eth_661731000000107->eth_ -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- snomedcode was double now str15 -(note: variable snomedcode was str15, now str16 to - accommodate using data's values) +(note: variable snomedcode was str15, now str16 to accommodate using data's + values) Result # of obs. ----------------------------------------- @@ -325,32 +308,29 @@ snomedcode was double now str15 1 | 61 100.00 100.00 ------------+----------------------------------- Total | 61 100.00 +(note: file ./output/snomed_ethnicity_count_6.dta not found) file ./output/snomed_ethnicity_count_6.dta saved -(note: j = 7695005 66406004 66920001 67165000 67439005 679310 -> 02 68486007 69865008 69983001 71176007 71949006 72201005 72 -> 248007 72337002 72809004 73524008 73736004 74159009 7430200 -> 4 75301003 75326007 75704009 76253004 76460008 76574004 767 -> 68002 76775001 76883002 77502007 77686000 79434006 80208004 -> 704385002 704386001 704387005 704388000 704389008 70439000 -> 4 704391000 704392007 718958002 718959005 718960000 7189610 -> 01 718962008 718963003 718964009 733078003 733446001 735001 -> 008 763726001 77711000000105 661741000000103 66687100000010 -> 7 668681000000107 710011000000101 718021000000105 718131000 -> 000106 723621000000103 728721000000100 728731000000103) +(note: j = 7695005 66406004 66920001 67165000 67439005 67931002 68486007 698650 +> 08 69983001 71176007 71949006 72201005 72248007 72337002 72809004 73524008 73 +> 736004 74159009 74302004 75301003 75326007 75704009 76253004 76460008 7657400 +> 4 76768002 76775001 76883002 77502007 77686000 79434006 80208004 704385002 70 +> 4386001 704387005 704388000 704389008 704390004 704391000 704392007 718958002 +> 718959005 718960000 718961001 718962008 718963003 718964009 733078003 733446 +> 001 735001008 763726001 77711000000105 661741000000103 666871000000107 668681 +> 000000107 710011000000101 718021000000105 718131000000106 723621000000103 728 +> 721000000100 728731000000103) Data wide -> long -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- Number of obs. 1 -> 61 Number of variables 63 -> 4 j variable (61 values) -> snomedcode xij variables: eth_7695005 eth_66406004 ... eth_728731000000103->eth_ -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- snomedcode was double now str15 -(note: variable snomedcode was str15, now str16 to - accommodate using data's values) +(note: variable snomedcode was str15, now str16 to accommodate using data's + values) Result # of obs. ----------------------------------------- @@ -365,34 +345,30 @@ snomedcode was double now str15 1 | 61 100.00 100.00 ------------+----------------------------------- Total | 61 100.00 +(note: file ./output/snomed_ethnicity_count_7.dta not found) file ./output/snomed_ethnicity_count_7.dta saved -(note: j = 8124001 9158000 80528001 81035008 81283004 8140300 -> 4 81560001 81653003 81846005 82174001 83365001 83584002 839 -> 39006 85163001 85371009 85515006 86275006 87323008 88790004 -> 88839008 88934004 89026003 90027003 90348007 90822005 9106 -> 6000 91191002 91488008 870448005 82121000000108 86461000000 -> 107 88911000000101 88921000000107 88931000000109 8894100000 -> 0100 88951000000102 88961000000104 88971000000106 889810000 -> 00108 88991000000105 89001000000105 89011000000107 89021000 -> 000101 89031000000104 92381000000106 92391000000108 9240100 -> 0000106 92411000000108 92421000000102 92431000000100 924410 -> 00000109 92451000000107 92461000000105 92471000000103 92481 -> 000000101 92491000000104 92501000000105 92511000000107 9252 -> 1000000101 92531000000104 92541000000108) +(note: j = 8124001 9158000 80528001 81035008 81283004 81403004 81560001 8165300 +> 3 81846005 82174001 83365001 83584002 83939006 85163001 85371009 85515006 862 +> 75006 87323008 88790004 88839008 88934004 89026003 90027003 90348007 90822005 +> 91066000 91191002 91488008 870448005 82121000000108 86461000000107 889110000 +> 00101 88921000000107 88931000000109 88941000000100 88951000000102 88961000000 +> 104 88971000000106 88981000000108 88991000000105 89001000000105 8901100000010 +> 7 89021000000101 89031000000104 92381000000106 92391000000108 92401000000106 +> 92411000000108 92421000000102 92431000000100 92441000000109 92451000000107 92 +> 461000000105 92471000000103 92481000000101 92491000000104 92501000000105 9251 +> 1000000107 92521000000101 92531000000104 92541000000108) Data wide -> long -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- Number of obs. 1 -> 61 Number of variables 63 -> 4 j variable (61 values) -> snomedcode xij variables: eth_8124001 eth_9158000 ... eth_92541000000108->eth_ -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- snomedcode was double now str14 -(note: variable snomedcode was str14, now str16 to - accommodate using data's values) +(note: variable snomedcode was str14, now str16 to accommodate using data's + values) Result # of obs. ----------------------------------------- @@ -407,37 +383,33 @@ snomedcode was double now str14 1 | 61 100.00 100.00 ------------+----------------------------------- Total | 61 100.00 +(note: file ./output/snomed_ethnicity_count_8.dta not found) file ./output/snomed_ethnicity_count_8.dta saved -(note: j = 9533000 92551000000106 92561000000109 925710000001 -> 02 92581000000100 92591000000103 92601000000109 92611000000 -> 106 92621000000100 92631000000103 92641000000107 9265100000 -> 0105 92661000000108 92671000000101 92681000000104 926910000 -> 00102 92701000000102 92711000000100 92721000000106 92731000 -> 000108 92741000000104 92751000000101 92761000000103 9277100 -> 0000105 92781000000107 92791000000109 93921000000101 939310 -> 00000104 93941000000108 93951000000106 93961000000109 93981 -> 000000100 93991000000103 94001000000108 94011000000105 9402 -> 1000000104 94031000000102 94041000000106 94051000000109 940 -> 61000000107 94071000000100 94081000000103 94091000000101 94 -> 101000000109 94111000000106 94121000000100 94131000000103 9 -> 4141000000107 94151000000105 976551000000109 97657100000010 -> 0 976591000000101 976611000000109 976631000000101 976651000 -> 000108 976671000000104 976691000000100 976711000000103 9767 -> 21000000109 976731000000106 976741000000102) +(note: j = 9533000 92551000000106 92561000000109 92571000000102 92581000000100 +> 92591000000103 92601000000109 92611000000106 92621000000100 92631000000103 92 +> 641000000107 92651000000105 92661000000108 92671000000101 92681000000104 9269 +> 1000000102 92701000000102 92711000000100 92721000000106 92731000000108 927410 +> 00000104 92751000000101 92761000000103 92771000000105 92781000000107 92791000 +> 000109 93921000000101 93931000000104 93941000000108 93951000000106 9396100000 +> 0109 93981000000100 93991000000103 94001000000108 94011000000105 940210000001 +> 04 94031000000102 94041000000106 94051000000109 94061000000107 94071000000100 +> 94081000000103 94091000000101 94101000000109 94111000000106 94121000000100 9 +> 4131000000103 94141000000107 94151000000105 976551000000109 976571000000100 9 +> 76591000000101 976611000000109 976631000000101 976651000000108 97667100000010 +> 4 976691000000100 976711000000103 976721000000109 976731000000106 97674100000 +> 0102) Data wide -> long -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- Number of obs. 1 -> 61 Number of variables 63 -> 4 j variable (61 values) -> snomedcode xij variables: eth_9533000 eth_92551000000106 ... eth_976741000000102->eth_ -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- snomedcode was double now str15 -(note: variable snomedcode was str15, now str16 to - accommodate using data's values) +(note: variable snomedcode was str15, now str16 to accommodate using data's + values) Result # of obs. ----------------------------------------- @@ -452,39 +424,33 @@ snomedcode was double now str15 1 | 61 100.00 100.00 ------------+----------------------------------- Total | 61 100.00 +(note: file ./output/snomed_ethnicity_count_9.dta not found) file ./output/snomed_ethnicity_count_9.dta saved -(note: j = 976751000000104 976761000000101 976771000000108 97 -> 6781000000105 976791000000107 976811000000108 9768310000001 -> 00 976851000000107 976871000000103 976891000000104 97691100 -> 0000101 976931000000109 976951000000102 976961000000104 976 -> 971000000106 976981000000108 977351000000100 97737100000010 -> 9 977391000000108 977401000000106 977411000000108 977421000 -> 000102 977431000000100 977441000000109 977551000000106 9775 -> 61000000109 977591000000103 977711000000100 977731000000108 -> 977751000000101 977771000000105 977791000000109 9778110000 -> 00105 977831000000102 977851000000109 977861000000107 97787 -> 1000000100 977881000000103 977911000000103 977931000000106 -> 977951000000104 977971000000108 978011000000101 97803100000 -> 0109 978041000000100 978051000000102 978061000000104 978071 -> 000000106 978111000000100 978171000000105 978191000000109 9 -> 78211000000108 978231000000100 978251000000107 978271000000 -> 103 978341000000102 978361000000101 978381000000105 9783910 -> 00000107 978401000000105 978411000000107) +(note: j = 976751000000104 976761000000101 976771000000108 976781000000105 9767 +> 91000000107 976811000000108 976831000000100 976851000000107 976871000000103 9 +> 76891000000104 976911000000101 976931000000109 976951000000102 97696100000010 +> 4 976971000000106 976981000000108 977351000000100 977371000000109 97739100000 +> 0108 977401000000106 977411000000108 977421000000102 977431000000100 97744100 +> 0000109 977551000000106 977561000000109 977591000000103 977711000000100 97773 +> 1000000108 977751000000101 977771000000105 977791000000109 977811000000105 97 +> 7831000000102 977851000000109 977861000000107 977871000000100 977881000000103 +> 977911000000103 977931000000106 977951000000104 977971000000108 978011000000 +> 101 978031000000109 978041000000100 978051000000102 978061000000104 978071000 +> 000106 978111000000100 978171000000105 978191000000109 978211000000108 978231 +> 000000100 978251000000107 978271000000103 978341000000102 978361000000101 978 +> 381000000105 978391000000107 978401000000105 978411000000107) Data wide -> long -------------------------------------------------------------- -> ---------------- +----------------------------------------------------------------------------- Number of obs. 1 -> 61 Number of variables 63 -> 4 j variable (61 values) -> snomedcode xij variables: -eth_976751000000104 eth_976761000000101 ... eth_9784110000001 -> 07->eth_ -------------------------------------------------------------- -> ---------------- +eth_976751000000104 eth_976761000000101 ... eth_978411000000107->eth_ +----------------------------------------------------------------------------- snomedcode was double now str15 -(note: variable snomedcode was str15, now str16 to - accommodate using data's values) +(note: variable snomedcode was str15, now str16 to accommodate using data's + values) Result # of obs. ----------------------------------------- @@ -499,6 +465,7 @@ snomedcode was double now str15 1 | 61 100.00 100.00 ------------+----------------------------------- Total | 61 100.00 +(note: file ./output/snomed_ethnicity_count_10.dta not found) file ./output/snomed_ethnicity_count_10.dta saved . @@ -506,8 +473,7 @@ file ./output/snomed_ethnicity_count_10.dta saved . use ./output/snomed_ethnicity_count_1.dta . forvalues i=2/10 { - 2. append using ./output/snomed_ethnicity_count_`i -> '.dta + 2. append using ./output/snomed_ethnicity_count_`i'.dta 3. } (label _merge already defined) (label _merge already defined) @@ -542,14 +508,21 @@ file ./output/snomed_ethnicity_count_10.dta saved ------------+----------------------------------- Total | 610 100.00 -. export delimited using ./output/snomed_ethnicity_counts.csv -> , replace +. tab include + + include | Freq. Percent Cum. +------------+----------------------------------- + 1 | 610 100.00 100.00 +------------+----------------------------------- + Total | 610 100.00 + +. export delimited using ./output/snomed_ethnicity_counts.csv, replace +(note: file ./output/snomed_ethnicity_counts.csv not found) file ./output/snomed_ethnicity_counts.csv saved . log close name: - log: /Users/lsh152058/Desktop/GitHub/ethnicity-short- -> data-report/logs/01_describe_snomed_ethnicity.log + log: /workspace/logs/01_describe_snomed_ethnicity.log log type: text - closed on: 8 Sep 2021, 12:51:09 -------------------------------------------------------------- + closed on: 16 Mar 2022, 10:48:13 +------------------------------------------------------------------------------- diff --git a/notebooks_jupyter/draft_report_ethnicity.ipynb b/notebooks_jupyter/draft_report_ethnicity.ipynb new file mode 100644 index 0000000..0e3d96b --- /dev/null +++ b/notebooks_jupyter/draft_report_ethnicity.ipynb @@ -0,0 +1,11420 @@ +{ + "cells": [ + { + "attachments": {}, + "cell_type": "markdown", + "metadata": {}, + "source": [ + "# Identifying Ethnicity in OpenSAFELY-TPP\n", + "\n", + "This short report describes how ethnicity can be identified in the OpenSAFELY-TPP database, and the strengths and weaknesses of the methods. Ethnicity is known to be an important determinant of health outcomes, particularly during the COVID-19 outbreak where a complex interplay of social and biological factors resulted in increased exposure, reduced protection, and increased severity of illness. The recording of patients' ethnic group in primary care can support efforts to achieve equity in service provision and outcomes. \n", + "\n", + "The [NHS Data Model and Dictionary](https://www.datadictionary.nhs.uk/data_elements/ethnic_category.html?hl=ethnicity) states that ethnic data groups defined in the [2001 census](https://www.ethnicity-facts-figures.service.gov.uk/style-guide/ethnic-groups#2001-census) is the national mandatory standard for the collection and analysis of ethnicity.\n", + "\n", + "In OpenSAFELY-TPP, there is no categorical \"ethnicity\" variable to record this information. Rather, ethnicity is recorded using clinical codes, like any other clinical or administrative event, with specific codes relating to specific ethnic groups. \n", + "\n", + "We define three codelists to capture primary care ethnicity in OpenSAFELY-TPP : One Clinical Terms Version 3 (CTV3) Codelist \"[CTV3:2020](https://www.opencodelists.org/codelist/opensafely/ethnicity/2020-04-27)\", and two systematised nomenclature of medicine clinical terms (SNOMED CT) codelists \"[SNOMED:2022](https://www.opencodelists.org/codelist/opensafely/ethnicity-snomed-0removed/2e641f61/)\" and \"[PRIMIS:2021](https://www.opencodelists.org/codelist/primis-covid19-vacc-uptake/eth2001/v1/)\".\n", + "\n", + "It is common for OpenSAFELY studies to supplement the primary care recorded ethnicity, where missing, with ethnicity data from the Secondary Uses Service (SUS). This report has focussed solely on the primary care recorded ethnicity. The representativeness of the CTV3:2020 coded ethnicity supplemented with SUS data has been [reported previously](https://wellcomeopenresearch.org/articles/7-191/v1).\n", + "\n", + "This is a living document that will be updated to reflect changes to the OpenSAFELY-TPP database and the patient records within.\n", + "\n", + "## OpenSAFELY\n", + "OpenSAFELY is an analytics platform for conducting analyses on Electronic Health Records inside the secure environment where the records are held. This has multiple benefits: \n", + "\n", + "* We don't transport large volumes of potentially disclosive pseudonymised patient data outside of the secure environments for analysis\n", + "* Analyses can run in near real-time as records are ready for analysis as soon as they appear in the secure environment\n", + "* All infrastructure and analysis code is stored in GitHub repositories, which are open for security review, scientific review, and re-use\n", + "\n", + "A key feature of OpenSAFELY is the use of study definitions, which are formal specifications of the datasets to be generated from the OpenSAFELY database. This takes care of much of the complex Electronic Healthcare Records (EHR) data wrangling required to create a dataset in an analysis-ready format. It also creates a library of standardised and validated variable definitions that can be deployed consistently across multiple projects. \n", + "\n", + "The purpose of this report is to describe the main variables that relate ethnicity, and their relative strengths and weaknesses.\n", + "\n", + "## Available Records\n", + "OpenSAFELY-TPP runs inside TPP's data centre which contains the primary care records for all patients registered at practices using TPP's SystmOne Clinical Information System. This data centre also imports external datasets from other sources, including A&E attendances and hospital admissions from NHS Digital's Secondary Use Service, and death registrations from the ONS. More information on available data sources can be found within the [OpenSAFELY documentation](https://docs.opensafely.org/data-sources/intro/). " + ] + }, + { + "attachments": {}, + "cell_type": "markdown", + "metadata": {}, + "source": [ + "# Methods\n", + "\n", + "We define three codelists to capture primary care ethnicity in OpenSAFELY-TPP : \"[CTV3:2020](https://www.opencodelists.org/codelist/opensafely/ethnicity/2020-04-27)\", \"[SNOMED:2022](https://www.opencodelists.org/codelist/opensafely/ethnicity-snomed-0removed/2e641f61/)\" and \"[PRIMIS:2021](https://www.opencodelists.org/codelist/primis-covid19-vacc-uptake/eth2001/v1/)\".\n", + "\n", + "\n", + "\n", + "### [Completeness of ethnicity data](#complete_cell)\n", + "To evaluate how well each of these codelists are populated, the proportion of patients with ethnicity recorded (that is, the presence of any code in the codelist in the patient record) was calculated for patients registered as of 1 January 2022. \n", + "\n", + "We examine trends across the whole population and by each of the following demographic and clinical subgroups to detect any inequalities.\n", + "\n", + "Demographic covariates:\n", + "\n", + "- Age band\n", + "- Sex\n", + "- Ethnicity\n", + "- Region\n", + "- IMD\n", + "\n", + "\n", + "Clinical covariates:\n", + "\n", + "- Dementia\n", + "- Diabetes\n", + "- Learning disability\n", + "\n", + "\n", + "### [Ethnicity by group](#group_cell)\n", + "\n", + "These codes were grouped into one of two ethnicity groups based on the 2001 Census groups: \n", + "\n", + "5-level group: \n", + "- Asian or Asian British\n", + "- Black or Black British \n", + "- Mixed \n", + "- White \n", + "- Chinese or other ethnic group \n", + "\n", + "\n", + "\n", + "16-level group: \n", + "- Asian or Asian British\n", + " - Indian\n", + " - Pakistani\n", + " - Bangladeshi\n", + " - Any other Asian background\n", + "- Black or Black British \n", + " - Caribbean\n", + " - African\n", + " - Any other Black background\n", + "- Mixed \n", + " - White and Black Caribbean\n", + " - White and Black African\n", + " - White and Asian\n", + " - Any other Mixed background\n", + "- White \n", + " - British\n", + " - Irish\n", + " - Any other White background\n", + "- Chinese or other ethnic group \n", + " - Chinese\n", + " - Any other\n", + " \n", + "\n", + "For patients with multiple ethnicity records, the most recent record was chosen (even if this is later than the cohort date). The proportion of patients with each ethnicity groups was calculated, within each clinical and demographic subgroup.\n", + "\n", + "\n", + "### [Changes in coded ethnicity groups](#changes_cell) \n", + "In order to investigate the extent of discrepancies within individual patients' recorded grouped ethnicity the proportion of patients with any grouped ethnicity recorded which does not match their 'latest' recorded grouped ethnicity was calculated for each of the five ethnic groups. \n", + "\n", + "### [Comparison of 'Latest' and 'Most Frequent' coded ethnicity](#frequent_cell)\n", + "\n", + "The proportion of patients with a recorded latest ethnicity whose most frequently recorded ethnicity does not match their latest recorded ethnicity was calculated for each of the five ethnic groups.\n", + "\n", + "All patient counts are rounded to the nearest 5. Percentages may not add to exactly 100 due to rounding.\n" + ] + }, + { + "cell_type": "code", + "execution_count": 356, + "metadata": {}, + "outputs": [], + "source": [ + "import sys" + ] + }, + { + "cell_type": "code", + "execution_count": 357, + "metadata": {}, + "outputs": [], + "source": [ + "import os\n", + "import pandas as pd\n", + "import numpy as np\n", + "from itertools import product\n", + "from IPython.display import display, Markdown, Image\n", + "from datetime import date, timedelta\n", + "\n", + "pd.set_option('display.max_columns', None)\n", + "pd.set_option('display.max_rows', 500)\n", + "pd.options.mode.chained_assignment = None \n", + "pd.options.display.float_format = '{:,.0f}'.format" + ] + }, + { + "cell_type": "code", + "execution_count": 358, + "metadata": {}, + "outputs": [], + "source": [ + "\n", + "def local_patient_counts(\n", + " definitions, output_path, code_dict=\"\", categories=False, missing=False,quietly =False\n", + "):\n", + " import pandas as pd\n", + "\n", + " suffix = \"_filled\"\n", + " overlap = \"all_filled\"\n", + " if missing == True:\n", + " suffix = \"_missing\"\n", + " overlap = \"all_missing\"\n", + " if categories:\n", + " ### uncomment to switch to proportion of recorded ethnicity instead of prop of TPP population\n", + " # df_population = pd.read_csv(\n", + " # f\"../output/{output_path}/simple_patient_counts_registered.csv\"\n", + " # ).set_index([\"group\", \"subgroup\"])\n", + " \n", + "\n", + " df_append = pd.read_csv(\n", + " f\"../output/{output_path}/simple_patient_counts_categories_registered.csv\"\n", + " ).set_index([\"group\", \"subgroup\"])\n", + " \n", + " if output_path == output_path_5:\n", + " global df_append_cat_5\n", + " df_append_cat_5 = df_append\n", + "\n", + " if output_path == output_path_16:\n", + " global df_append_cat_16\n", + " df_append_cat_16 = df_append\n", + " ### uncomment to switch to proportion of recorded ethnicity instead of prop of TPP population\n", + " # df_append.drop(\"population\", inplace=True, axis=1)\n", + " for definition in definitions:\n", + " ### uncomment to switch to proportion of recorded ethnicity instead of prop of TPP population\n", + " # df_append[f\"population_{definition}\"] = df_population[definition+\"_filled\"]\n", + " # ensure definitions[n] in code_dict[definitions[n]] below refers to one of the definitions of interest\n", + " full_definitions = [\n", + " f\"{category}_{definition}\"\n", + " for category, definition in product(\n", + " code_dict[definitions[1]].values(), [definition]\n", + " )\n", + " ]\n", + " for full_definition in full_definitions:\n", + " if missing:\n", + " \n", + " df_append[full_definition + suffix] = (\n", + " ### uncomment to switch to proportion of recorded ethnicity instead of prop of TPP population\n", + " # df_append[f\"population_{definition}\"] - df_append[full_definition + \"_filled\"]\n", + " df_append[f\"population\"] - df_append[full_definition + \"_filled\"]\n", + " ) \n", + " ## uncomment to switch to proportion of recorded ethnicity instead of prop of TPP population \n", + " df_append[full_definition + \"_pct\"] = round(\n", + " (df_append[full_definition + suffix].div(df_append[f\"population\"])) * 100, 1\n", + " )\n", + " df_append[overlap + \"_pct\"] = round(\n", + " (df_append[overlap].div(df_append[f\"population\"])) * 100, 1\n", + " )\n", + "\n", + " # Combine count and percentage columns\n", + " df_append[full_definition] = (\n", + " df_append[full_definition + suffix].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_append[full_definition + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_append = df_append.drop(columns=[full_definition + suffix, full_definition + \"_pct\"])\n", + " else:\n", + " df_append = pd.read_csv(\n", + " f\"../output/{output_path}/simple_patient_counts_registered.csv\"\n", + " ).set_index([\"group\", \"subgroup\"])\n", + " global total\n", + " total = df_append\n", + " for definition in definitions:\n", + " if missing:\n", + " df_append[definition + suffix] = (\n", + " df_append[\"population\"] - df_append[definition + \"_filled\"]\n", + " ) \n", + " df_append[definition + \"_pct\"] = round(\n", + " (df_append[definition + suffix].div(df_append[\"population\"])) * 100, 1\n", + " )\n", + " df_append[overlap + \"_pct\"] = round(\n", + " (df_append[overlap].div(df_append[\"population\"])) * 100, 1\n", + " )\n", + "\n", + " # Combine count and percentage columns\n", + " df_append[definition] = (\n", + " df_append[definition + suffix].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_append[definition + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_append = df_append.drop(columns=[definition + suffix, definition + \"_pct\"])\n", + " df_append[overlap] = (\n", + " df_append[overlap].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_append[overlap + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_append = df_append.reset_index()\n", + " df_append = df_append.replace(\"True\", \"Yes\")\n", + " df_append = df_append.replace(\"False\", \"No\")\n", + " df_append = df_append.set_index([\"group\", \"subgroup\"])\n", + " df_append = df_append.drop(columns=[overlap + \"_pct\"])\n", + " if categories:\n", + " full_definitions = [\n", + " f\"{category}_{definition}\"\n", + " for category, definition in product(\n", + " code_dict[definitions[1]].values(), definitions\n", + " )\n", + " ]\n", + " df_patient_counts = df_append[full_definitions]\n", + " else: \n", + " df_patient_counts = df_append[definitions + [overlap] + [\"population\"]]\n", + " # Final redaction step\n", + " df_patient_counts = df_patient_counts.replace(np.nan, \"-\")\n", + " df_patient_counts = df_patient_counts.replace(\"nan (nan)\", \"- (-)\")\n", + " for k, v in definition_dict.items():\n", + " df_patient_counts.columns = df_patient_counts.columns.str.replace(k,v) \n", + " df_patient_counts.columns = df_patient_counts.columns.str.replace(\"_\", \" \")\n", + " if quietly == False:\n", + " display(df_patient_counts)\n", + " print(\" \\n\")\n", + " \n", + " if categories:\n", + " df_patient_counts.to_csv(\n", + " f\"../output/{output_path}/local_patient_counts_categories_registered.csv\"\n", + " )\n", + " \n", + " " + ] + }, + { + "cell_type": "code", + "execution_count": 359, + "metadata": {}, + "outputs": [], + "source": [ + "### CONFIGURE ###\n", + "definitions_5 = [ 'ethnicity_new_5','ethnicity_5', 'ethnicity_primis_5']\n", + "definitions_16 = ['ethnicity_new_16', 'ethnicity_16', 'ethnicity_primis_16']\n", + "covariates = ['_age_band','_sex','_region','_imd','_dementia','_diabetes','_hypertension','_learning_disability']\n", + "output_path_5 = 'simplified_output/5_group/tables'\n", + "output_path_16 = 'simplified_output/16_group/tables'\n", + "suffixes = ['','_missing']\n", + "suffix = ''\n", + "code_dict_5 = {\n", + " \"imd\": {\n", + " 0: \"Unknown\",\n", + " 1: \"1 Most deprived\",\n", + " 2: \"2\",\n", + " 3: \"3\",\n", + " 4: \"4\",\n", + " 5: \"5 Least deprived\",\n", + " },\n", + " \"ethnicity_5\": {1: \"Asian\", 2: \"Black\", 3: \"Mixed\", 4: \"White\", 5: \"Other\"},\n", + " \"ethnicity_new_5\": {1: \"Asian\", 2: \"Black\", 3: \"Mixed\", 4: \"White\", 5: \"Other\"},\n", + " \"ethnicity_primis_5\": {1: \"Asian\", 2: \"Black\", 3: \"Mixed\", 4: \"White\", 5: \"Other\"},\n", + "}\n", + "\n", + "# Code dictionary\n", + "code_dict_16 = {\n", + " \"imd\": {\n", + " 0: \"Unknown\",\n", + " 1: \"1 Most deprived\",\n", + " 2: \"2\",\n", + " 3: \"3\",\n", + " 4: \"4\",\n", + " 5: \"5 Least deprived\",\n", + " },\n", + " \"ethnicity_16\": {\n", + " 1: \"Indian\",\n", + " 2: \"Pakistani\",\n", + " 3: \"Bangladeshi\",\n", + " 4: \"Other_Asian\",\n", + " 5: \"Caribbean\",\n", + " 6: \"African\",\n", + " 7: \"Other_Black\",\n", + " 8: \"White_and_Black_Caribbean\",\n", + " 9: \"White_and_Black_African\",\n", + " 10: \"White_and_Asian\",\n", + " 11: \"Other_Mixed\",\n", + " 12: \"White_British\",\n", + " 13: \"White_Irish\",\n", + " 14: \"Other_White\",\n", + " 15: \"Chinese\",\n", + " 16: \"Any_other_ethnic_group\",\n", + " },\n", + " \"ethnicity_new_16\": {\n", + " 1: \"Indian\",\n", + " 2: \"Pakistani\",\n", + " 3: \"Bangladeshi\",\n", + " 4: \"Other_Asian\",\n", + " 5: \"Caribbean\",\n", + " 6: \"African\",\n", + " 7: \"Other_Black\",\n", + " 8: \"White_and_Black_Caribbean\",\n", + " 9: \"White_and_Black_African\",\n", + " 10: \"White_and_Asian\",\n", + " 11: \"Other_Mixed\",\n", + " 12: \"White_British\",\n", + " 13: \"White_Irish\",\n", + " 14: \"Other_White\",\n", + " 15: \"Chinese\",\n", + " 16: \"Any_other_ethnic_group\",\n", + " },\n", + " \"ethnicity_primis_16\": {\n", + " 1: \"Indian\",\n", + " 2: \"Pakistani\",\n", + " 3: \"Bangladeshi\",\n", + " 4: \"Other_Asian\",\n", + " 5: \"Caribbean\",\n", + " 6: \"African\",\n", + " 7: \"Other_Black\",\n", + " 8: \"White_and_Black_Caribbean\",\n", + " 9: \"White_and_Black_African\",\n", + " 10: \"White_and_Asian\",\n", + " 11: \"Other_Mixed\",\n", + " 12: \"White_British\",\n", + " 13: \"White_Irish\",\n", + " 14: \"Other_White\",\n", + " 15: \"Chinese\",\n", + " 16: \"Any_other_ethnic_group\",\n", + " },\n", + "}\n", + "\n", + "definition_dict = {\n", + " \"ethnicity_new_5\": \"5 SNOMED:2022\",\n", + " \"ethnicity_primis_5\": \"5 PRIMIS:2021\",\n", + " \"ethnicity_5\": \"5 CTV3:2020\",\n", + " \"ethnicity_new_16\": \"16 SNOMED:2022\",\n", + " \"ethnicity_primis_16\": \"16 PRIMIS:2021\",\n", + " \"ethnicity_16\": \"16 CTV3:2020\",\n", + "}\n" + ] + }, + { + "cell_type": "code", + "execution_count": 360, + "metadata": {}, + "outputs": [], + "source": [ + "# get data extraction date\n", + "extract_date = pd.to_datetime(os.path.getmtime(f\"../output/{output_path_5}/simple_patient_counts_registered.csv\"), unit='s')\n", + "# get notebook run date\n", + "run_date = date.today()" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "## Results" + ] + }, + { + "attachments": {}, + "cell_type": "markdown", + "metadata": {}, + "source": [ + " \n", + "\n", + "### Completeness of ethnicity data " + ] + }, + { + "cell_type": "code", + "execution_count": 361, + "metadata": {}, + "outputs": [], + "source": [ + "### Run quietly to obtain globals for Markdown\n", + "local_patient_counts(\n", + " definitions_5, output_path_5,quietly=True\n", + " )\n" + ] + }, + { + "cell_type": "code", + "execution_count": 362, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "Around 0.000255 million patients who have been registered in OpenSAFELY-TPP are identified in all three codelists. CTV3:2020 is the most well-populated with 0.00048 million patients having at least one CTV3:2020 recording of ethnicity. \n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"\"\"\n", + "Around {float('%.3g' % total[\"all_filled\"][0])/1000000} million patients who have been registered in OpenSAFELY-TPP are identified in all three codelists. CTV3:2020 is the most well-populated with {float('%.3g' % total[\"ethnicity_new_5_filled\"][0])/1000000} million patients having at least one CTV3:2020 recording of ethnicity. \n", + "\"\"\"))" + ] + }, + { + "cell_type": "code", + "execution_count": 363, + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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5 SNOMED:20225 CTV3:20205 PRIMIS:2021all filledpopulation
groupsubgroup
allwith records480 (73.8)490 (75.4)475 (73.1)255 (39.2)650
age_band0-1945 (75.0)40 (66.7)50 (83.3)25 (41.7)60
20-2975 (75.0)70 (70.0)75 (75.0)40 (40.0)100
30-3965 (68.4)70 (73.7)65 (68.4)30 (31.6)95
40-4960 (70.6)65 (76.5)55 (64.7)25 (29.4)85
50-5955 (73.3)60 (80.0)50 (66.7)30 (40.0)75
60-6970 (82.4)65 (76.5)70 (82.4)45 (52.9)85
70-7955 (73.3)50 (66.7)55 (73.3)25 (33.3)75
80+60 (80.0)65 (86.7)60 (80.0)35 (46.7)75
sexF235 (75.8)225 (72.6)235 (75.8)115 (37.1)310
M250 (73.5)265 (77.9)245 (72.1)140 (41.2)340
regionEast Midlands30 (66.7)35 (77.8)35 (77.8)15 (33.3)45
East of England25 (62.5)30 (75.0)25 (62.5)15 (37.5)40
London65 (81.2)60 (75.0)60 (75.0)35 (43.8)80
North East30 (75.0)30 (75.0)30 (75.0)15 (37.5)40
North West20 (57.1)30 (85.7)30 (85.7)10 (28.6)35
South East35 (77.8)30 (66.7)30 (66.7)15 (33.3)45
South West45 (81.8)40 (72.7)40 (72.7)25 (45.5)55
West Midlands30 (75.0)30 (75.0)35 (87.5)15 (37.5)40
Yorkshire and the Humber35 (77.8)30 (66.7)30 (66.7)20 (44.4)45
imd1 Most deprived90 (72.0)90 (72.0)95 (76.0)45 (36.0)125
2105 (77.8)110 (81.5)100 (74.1)55 (40.7)135
385 (73.9)80 (69.6)85 (73.9)35 (30.4)115
495 (76.0)100 (80.0)85 (68.0)60 (48.0)125
5 Least deprived105 (72.4)110 (75.9)105 (72.4)60 (41.4)145
Unknown- (-)- (-)- (-)- (-)-
dementiaNo475 (73.6)490 (76.0)470 (72.9)255 (39.5)645
Yes- (-)- (-)- (-)- (-)-
diabetesNo475 (74.2)485 (75.8)470 (73.4)255 (39.8)640
Yes- (-)- (-)- (-)- (-)10
hypertensionNo475 (73.6)485 (75.2)470 (72.9)255 (39.5)645
Yes- (-)- (-)- (-)- (-)-
learning_disabilityNo475 (73.6)485 (75.2)470 (72.9)255 (39.5)645
Yes- (-)- (-)- (-)- (-)-
\n", + "
" + ], + "text/plain": [ + " 5 SNOMED:2022 5 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 480 (73.8) 490 (75.4) \n", + "age_band 0-19 45 (75.0) 40 (66.7) \n", + " 20-29 75 (75.0) 70 (70.0) \n", + " 30-39 65 (68.4) 70 (73.7) \n", + " 40-49 60 (70.6) 65 (76.5) \n", + " 50-59 55 (73.3) 60 (80.0) \n", + " 60-69 70 (82.4) 65 (76.5) \n", + " 70-79 55 (73.3) 50 (66.7) \n", + " 80+ 60 (80.0) 65 (86.7) \n", + "sex F 235 (75.8) 225 (72.6) \n", + " M 250 (73.5) 265 (77.9) \n", + "region East Midlands 30 (66.7) 35 (77.8) \n", + " East of England 25 (62.5) 30 (75.0) \n", + " London 65 (81.2) 60 (75.0) \n", + " North East 30 (75.0) 30 (75.0) \n", + " North West 20 (57.1) 30 (85.7) \n", + " South East 35 (77.8) 30 (66.7) \n", + " South West 45 (81.8) 40 (72.7) \n", + " West Midlands 30 (75.0) 30 (75.0) \n", + " Yorkshire and the Humber 35 (77.8) 30 (66.7) \n", + "imd 1 Most deprived 90 (72.0) 90 (72.0) \n", + " 2 105 (77.8) 110 (81.5) \n", + " 3 85 (73.9) 80 (69.6) \n", + " 4 95 (76.0) 100 (80.0) \n", + " 5 Least deprived 105 (72.4) 110 (75.9) \n", + " Unknown - (-) - (-) \n", + "dementia No 475 (73.6) 490 (76.0) \n", + " Yes - (-) - (-) \n", + "diabetes No 475 (74.2) 485 (75.8) \n", + " Yes - (-) - (-) \n", + "hypertension No 475 (73.6) 485 (75.2) \n", + " Yes - (-) - (-) \n", + "learning_disability No 475 (73.6) 485 (75.2) \n", + " Yes - (-) - (-) \n", + "\n", + " 5 PRIMIS:2021 all filled \\\n", + "group subgroup \n", + "all with records 475 (73.1) 255 (39.2) \n", + "age_band 0-19 50 (83.3) 25 (41.7) \n", + " 20-29 75 (75.0) 40 (40.0) \n", + " 30-39 65 (68.4) 30 (31.6) \n", + " 40-49 55 (64.7) 25 (29.4) \n", + " 50-59 50 (66.7) 30 (40.0) \n", + " 60-69 70 (82.4) 45 (52.9) \n", + " 70-79 55 (73.3) 25 (33.3) \n", + " 80+ 60 (80.0) 35 (46.7) \n", + "sex F 235 (75.8) 115 (37.1) \n", + " M 245 (72.1) 140 (41.2) \n", + "region East Midlands 35 (77.8) 15 (33.3) \n", + " East of England 25 (62.5) 15 (37.5) \n", + " London 60 (75.0) 35 (43.8) \n", + " North East 30 (75.0) 15 (37.5) \n", + " North West 30 (85.7) 10 (28.6) \n", + " South East 30 (66.7) 15 (33.3) \n", + " South West 40 (72.7) 25 (45.5) \n", + " West Midlands 35 (87.5) 15 (37.5) \n", + " Yorkshire and the Humber 30 (66.7) 20 (44.4) \n", + "imd 1 Most deprived 95 (76.0) 45 (36.0) \n", + " 2 100 (74.1) 55 (40.7) \n", + " 3 85 (73.9) 35 (30.4) \n", + " 4 85 (68.0) 60 (48.0) \n", + " 5 Least deprived 105 (72.4) 60 (41.4) \n", + " Unknown - (-) - (-) \n", + "dementia No 470 (72.9) 255 (39.5) \n", + " Yes - (-) - (-) \n", + "diabetes No 470 (73.4) 255 (39.8) \n", + " Yes - (-) - (-) \n", + "hypertension No 470 (72.9) 255 (39.5) \n", + " Yes - (-) - (-) \n", + "learning_disability No 470 (72.9) 255 (39.5) \n", + " Yes - (-) - (-) \n", + "\n", + " population \n", + "group subgroup \n", + "all with records 650 \n", + "age_band 0-19 60 \n", + " 20-29 100 \n", + " 30-39 95 \n", + " 40-49 85 \n", + " 50-59 75 \n", + " 60-69 85 \n", + " 70-79 75 \n", + " 80+ 75 \n", + "sex F 310 \n", + " M 340 \n", + "region East Midlands 45 \n", + " East of England 40 \n", + " London 80 \n", + " North East 40 \n", + " North West 35 \n", + " South East 45 \n", + " South West 55 \n", + " West Midlands 40 \n", + " Yorkshire and the Humber 45 \n", + "imd 1 Most deprived 125 \n", + " 2 135 \n", + " 3 115 \n", + " 4 125 \n", + " 5 Least deprived 145 \n", + " Unknown - \n", + "dementia No 645 \n", + " Yes - \n", + "diabetes No 640 \n", + " Yes 10 \n", + "hypertension No 645 \n", + " Yes - \n", + "learning_disability No 645 \n", + " Yes - " + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + " \n", + "\n" + ] + } + ], + "source": [ + "local_patient_counts(\n", + " definitions_5, output_path_5\n", + " )" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + " \n", + "\n", + "### Ethnicity by group" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "#### 5 Group" + ] + }, + { + "cell_type": "code", + "execution_count": 364, + "metadata": {}, + "outputs": [], + "source": [ + "### Run quietly to obtain globals for Markdown\n", + "local_patient_counts(\n", + " definitions_5, output_path_5,code_dict_5, categories=True,missing=False,quietly=True\n", + " )" + ] + }, + { + "cell_type": "code", + "execution_count": 365, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "The SNOMED:2022 is the most well-populated codelist for `White` (285), `Mixed` (55), `Asian` (45) and `Black` (50) ethnicities. The CTV3:2020 codelist classifies more people as `Other` than the SNOMED:2022 codelist (115 and 50 respectively), however, the CTV3:2020 codelist includes some codes relating to religion rather than ethnicity (e.g. \"XaJSe: Muslim - ethnic category 2001 census\") which were excluded from the SNOMED:2022 codelist.\n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"\"\"\n", + "The SNOMED:2022 is the most well-populated codelist for `White` ({'{:,.0f}'.format(float('{:,.3g}'.format(df_append_cat_5[\"White_ethnicity_new_5_filled\"][0])))}), `Mixed` ({'{:,.0f}'.format(float('{:,.3g}'.format(df_append_cat_5[\"Mixed_ethnicity_new_5_filled\"][0])))}), `Asian` ({'{:,.0f}'.format(float('{:,.3g}'.format(df_append_cat_5[\"Asian_ethnicity_new_5_filled\"][0])))}) and `Black` ({'{:,.0f}'.format(float('{:,.3g}'.format(df_append_cat_5[\"Black_ethnicity_new_5_filled\"][0])))}) ethnicities. The CTV3:2020 codelist classifies more people as `Other` than the SNOMED:2022 codelist ({'{:,.0f}'.format(float('{:,.3g}'.format(df_append_cat_5[\"Other_ethnicity_5_filled\"][0])))} and {'{:,.0f}'.format(float('{:,.3g}'.format(df_append_cat_5[\"Other_ethnicity_new_5_filled\"][0])))} respectively), however, the CTV3:2020 codelist includes some codes relating to religion rather than ethnicity (e.g. \"XaJSe: Muslim - ethnic category 2001 census\") which were excluded from the SNOMED:2022 codelist.\n", + "\"\"\"))\n" + ] + }, + { + "cell_type": "code", + "execution_count": 366, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "### Ethnicity by 5 group" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"### Ethnicity by 5 group\"))" + ] + }, + { + "cell_type": "code", + "execution_count": 367, + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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Asian 5 SNOMED:2022Asian 5 CTV3:2020Asian 5 PRIMIS:2021Black 5 SNOMED:2022Black 5 CTV3:2020Black 5 PRIMIS:2021Mixed 5 SNOMED:2022Mixed 5 CTV3:2020Mixed 5 PRIMIS:2021White 5 SNOMED:2022White 5 CTV3:2020White 5 PRIMIS:2021Other 5 SNOMED:2022Other 5 CTV3:2020Other 5 PRIMIS:2021
groupsubgroup
allwith records45 (6.9)100 (15.4)95 (14.6)50 (7.7)85 (13.1)95 (14.6)55 (8.5)105 (16.2)90 (13.8)285 (43.8)85 (13.1)95 (14.6)50 (7.7)115 (17.7)100 (15.4)
age_band0-19- (-)15 (25.0)10 (16.7)- (-)- (-)- (-)- (-)- (-)10 (16.7)25 (41.7)10 (16.7)- (-)- (-)10 (16.7)15 (25.0)
20-2910 (10.0)10 (10.0)15 (15.0)- (-)15 (15.0)15 (15.0)10 (10.0)15 (15.0)10 (10.0)45 (45.0)15 (15.0)20 (20.0)- (-)20 (20.0)15 (15.0)
30-39- (-)20 (21.1)10 (10.5)10 (10.5)15 (15.8)15 (15.8)10 (10.5)15 (15.8)15 (15.8)35 (36.8)- (-)15 (15.8)10 (10.5)20 (21.1)10 (10.5)
40-49- (-)20 (23.5)10 (11.8)- (-)10 (11.8)10 (11.8)- (-)10 (11.8)10 (11.8)35 (41.2)10 (11.8)10 (11.8)- (-)20 (23.5)10 (11.8)
50-59- (-)10 (13.3)10 (13.3)- (-)10 (13.3)10 (13.3)- (-)10 (13.3)10 (13.3)35 (46.7)15 (20.0)10 (13.3)- (-)15 (20.0)15 (20.0)
60-6910 (11.8)10 (11.8)15 (17.6)- (-)15 (17.6)15 (17.6)- (-)20 (23.5)10 (11.8)45 (52.9)10 (11.8)20 (23.5)- (-)15 (17.6)10 (11.8)
70-79- (-)10 (13.3)15 (20.0)10 (13.3)10 (13.3)15 (20.0)- (-)10 (13.3)- (-)35 (46.7)15 (20.0)- (-)- (-)10 (13.3)15 (20.0)
80+10 (13.3)10 (13.3)10 (13.3)- (-)- (-)15 (20.0)10 (13.3)20 (26.7)10 (13.3)35 (46.7)10 (13.3)10 (13.3)- (-)15 (20.0)10 (13.3)
sexF25 (8.1)45 (14.5)45 (14.5)20 (6.5)40 (12.9)50 (16.1)25 (8.1)50 (16.1)45 (14.5)135 (43.5)35 (11.3)45 (14.5)25 (8.1)55 (17.7)50 (16.1)
M25 (7.4)50 (14.7)50 (14.7)25 (7.4)45 (13.2)45 (13.2)25 (7.4)55 (16.2)45 (13.2)150 (44.1)50 (14.7)55 (16.2)20 (5.9)60 (17.6)50 (14.7)
regionEast Midlands- (-)- (-)10 (22.2)- (-)- (-)- (-)- (-)10 (22.2)- (-)20 (44.4)- (-)15 (33.3)- (-)10 (22.2)- (-)
East of England- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (25.0)- (-)15 (37.5)- (-)10 (25.0)- (-)- (-)- (-)
London- (-)10 (12.5)10 (12.5)- (-)10 (12.5)10 (12.5)10 (12.5)15 (18.8)10 (12.5)40 (50.0)15 (18.8)10 (12.5)- (-)10 (12.5)15 (18.8)
North East- (-)10 (25.0)- (-)- (-)- (-)10 (25.0)- (-)10 (25.0)- (-)15 (37.5)- (-)- (-)- (-)- (-)10 (25.0)
North West- (-)- (-)- (-)- (-)10 (28.6)- (-)- (-)- (-)10 (28.6)15 (42.9)- (-)- (-)- (-)10 (28.6)10 (28.6)
South East- (-)10 (22.2)- (-)- (-)- (-)- (-)- (-)- (-)10 (22.2)20 (44.4)- (-)- (-)- (-)10 (22.2)- (-)
South West- (-)10 (18.2)10 (18.2)- (-)10 (18.2)- (-)- (-)10 (18.2)- (-)20 (36.4)- (-)10 (18.2)10 (18.2)10 (18.2)- (-)
West Midlands- (-)- (-)- (-)- (-)- (-)10 (25.0)- (-)10 (25.0)- (-)20 (50.0)- (-)- (-)- (-)10 (25.0)10 (25.0)
Yorkshire and the Humber- (-)- (-)10 (22.2)- (-)- (-)- (-)- (-)- (-)- (-)20 (44.4)- (-)- (-)- (-)10 (22.2)- (-)
imd1 Most deprived10 (8.0)15 (12.0)20 (16.0)- (-)15 (12.0)15 (12.0)10 (8.0)20 (16.0)15 (12.0)60 (48.0)10 (8.0)20 (16.0)10 (8.0)25 (20.0)25 (20.0)
215 (11.1)20 (14.8)20 (14.8)10 (7.4)20 (14.8)25 (18.5)- (-)25 (18.5)15 (11.1)65 (48.1)20 (14.8)20 (14.8)10 (7.4)30 (22.2)20 (14.8)
310 (8.7)15 (13.0)15 (13.0)- (-)15 (13.0)20 (17.4)15 (13.0)20 (17.4)15 (13.0)45 (39.1)15 (13.0)20 (17.4)10 (8.7)15 (13.0)20 (17.4)
4- (-)25 (20.0)15 (12.0)10 (8.0)20 (16.0)15 (12.0)15 (12.0)20 (16.0)15 (12.0)50 (40.0)15 (12.0)20 (16.0)10 (8.0)25 (20.0)20 (16.0)
5 Least deprived10 (6.9)25 (17.2)20 (13.8)15 (10.3)20 (13.8)20 (13.8)10 (6.9)25 (17.2)30 (20.7)65 (44.8)25 (17.2)20 (13.8)10 (6.9)20 (13.8)20 (13.8)
Unknown- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
dementiaNo45 (7.0)95 (14.7)90 (14.0)50 (7.8)85 (13.2)95 (14.7)55 (8.5)105 (16.3)85 (13.2)285 (44.2)85 (13.2)95 (14.7)45 (7.0)115 (17.8)100 (15.5)
Yes- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
diabetesNo45 (7.0)95 (14.8)90 (14.1)50 (7.8)85 (13.3)95 (14.8)50 (7.8)105 (16.4)85 (13.3)280 (43.8)85 (13.3)95 (14.8)45 (7.0)115 (18.0)100 (15.6)
Yes- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
hypertensionNo45 (7.0)100 (15.5)90 (14.0)45 (7.0)85 (13.2)95 (14.7)55 (8.5)105 (16.3)90 (14.0)280 (43.4)85 (13.2)95 (14.7)50 (7.8)115 (17.8)100 (15.5)
Yes- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
learning_disabilityNo45 (7.0)100 (15.5)95 (14.7)50 (7.8)85 (13.2)95 (14.7)55 (8.5)105 (16.3)85 (13.2)280 (43.4)85 (13.2)95 (14.7)45 (7.0)115 (17.8)100 (15.5)
Yes- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
\n", + "
" + ], + "text/plain": [ + " Asian 5 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 45 (6.9) \n", + "age_band 0-19 - (-) \n", + " 20-29 10 (10.0) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 10 (11.8) \n", + " 70-79 - (-) \n", + " 80+ 10 (13.3) \n", + "sex F 25 (8.1) \n", + " M 25 (7.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 10 (8.0) \n", + " 2 15 (11.1) \n", + " 3 10 (8.7) \n", + " 4 - (-) \n", + " 5 Least deprived 10 (6.9) \n", + " Unknown - (-) \n", + "dementia No 45 (7.0) \n", + " Yes - (-) \n", + "diabetes No 45 (7.0) \n", + " Yes - (-) \n", + "hypertension No 45 (7.0) \n", + " Yes - (-) \n", + "learning_disability No 45 (7.0) \n", + " Yes - (-) \n", + "\n", + " Asian 5 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 100 (15.4) \n", + "age_band 0-19 15 (25.0) \n", + " 20-29 10 (10.0) \n", + " 30-39 20 (21.1) \n", + " 40-49 20 (23.5) \n", + " 50-59 10 (13.3) \n", + " 60-69 10 (11.8) \n", + " 70-79 10 (13.3) \n", + " 80+ 10 (13.3) \n", + "sex F 45 (14.5) \n", + " M 50 (14.7) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London 10 (12.5) \n", + " North East 10 (25.0) \n", + " North West - (-) \n", + " South East 10 (22.2) \n", + " South West 10 (18.2) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 15 (12.0) \n", + " 2 20 (14.8) \n", + " 3 15 (13.0) \n", + " 4 25 (20.0) \n", + " 5 Least deprived 25 (17.2) \n", + " Unknown - (-) \n", + "dementia No 95 (14.7) \n", + " Yes - (-) \n", + "diabetes No 95 (14.8) \n", + " Yes - (-) \n", + "hypertension No 100 (15.5) \n", + " Yes - (-) \n", + "learning_disability No 100 (15.5) \n", + " Yes - (-) \n", + "\n", + " Asian 5 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 95 (14.6) \n", + "age_band 0-19 10 (16.7) \n", + " 20-29 15 (15.0) \n", + " 30-39 10 (10.5) \n", + " 40-49 10 (11.8) \n", + " 50-59 10 (13.3) \n", + " 60-69 15 (17.6) \n", + " 70-79 15 (20.0) \n", + " 80+ 10 (13.3) \n", + "sex F 45 (14.5) \n", + " M 50 (14.7) \n", + "region East Midlands 10 (22.2) \n", + " East of England - (-) \n", + " London 10 (12.5) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West 10 (18.2) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber 10 (22.2) \n", + "imd 1 Most deprived 20 (16.0) \n", + " 2 20 (14.8) \n", + " 3 15 (13.0) \n", + " 4 15 (12.0) \n", + " 5 Least deprived 20 (13.8) \n", + " Unknown - (-) \n", + "dementia No 90 (14.0) \n", + " Yes - (-) \n", + "diabetes No 90 (14.1) \n", + " Yes - (-) \n", + "hypertension No 90 (14.0) \n", + " Yes - (-) \n", + "learning_disability No 95 (14.7) \n", + " Yes - (-) \n", + "\n", + " Black 5 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 50 (7.7) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 10 (10.5) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 10 (13.3) \n", + " 80+ - (-) \n", + "sex F 20 (6.5) \n", + " M 25 (7.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 10 (7.4) \n", + " 3 - (-) \n", + " 4 10 (8.0) \n", + " 5 Least deprived 15 (10.3) \n", + " Unknown - (-) \n", + "dementia No 50 (7.8) \n", + " Yes - (-) \n", + "diabetes No 50 (7.8) \n", + " Yes - (-) \n", + "hypertension No 45 (7.0) \n", + " Yes - (-) \n", + "learning_disability No 50 (7.8) \n", + " Yes - (-) \n", + "\n", + " Black 5 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 85 (13.1) \n", + "age_band 0-19 - (-) \n", + " 20-29 15 (15.0) \n", + " 30-39 15 (15.8) \n", + " 40-49 10 (11.8) \n", + " 50-59 10 (13.3) \n", + " 60-69 15 (17.6) \n", + " 70-79 10 (13.3) \n", + " 80+ - (-) \n", + "sex F 40 (12.9) \n", + " M 45 (13.2) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London 10 (12.5) \n", + " North East - (-) \n", + " North West 10 (28.6) \n", + " South East - (-) \n", + " South West 10 (18.2) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 15 (12.0) \n", + " 2 20 (14.8) \n", + " 3 15 (13.0) \n", + " 4 20 (16.0) \n", + " 5 Least deprived 20 (13.8) \n", + " Unknown - (-) \n", + "dementia No 85 (13.2) \n", + " Yes - (-) \n", + "diabetes No 85 (13.3) \n", + " Yes - (-) \n", + "hypertension No 85 (13.2) \n", + " Yes - (-) \n", + "learning_disability No 85 (13.2) \n", + " Yes - (-) \n", + "\n", + " Black 5 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 95 (14.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 15 (15.0) \n", + " 30-39 15 (15.8) \n", + " 40-49 10 (11.8) \n", + " 50-59 10 (13.3) \n", + " 60-69 15 (17.6) \n", + " 70-79 15 (20.0) \n", + " 80+ 15 (20.0) \n", + "sex F 50 (16.1) \n", + " M 45 (13.2) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London 10 (12.5) \n", + " North East 10 (25.0) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands 10 (25.0) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 15 (12.0) \n", + " 2 25 (18.5) \n", + " 3 20 (17.4) \n", + " 4 15 (12.0) \n", + " 5 Least deprived 20 (13.8) \n", + " Unknown - (-) \n", + "dementia No 95 (14.7) \n", + " Yes - (-) \n", + "diabetes No 95 (14.8) \n", + " Yes - (-) \n", + "hypertension No 95 (14.7) \n", + " Yes - (-) \n", + "learning_disability No 95 (14.7) \n", + " Yes - (-) \n", + "\n", + " Mixed 5 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 55 (8.5) \n", + "age_band 0-19 - (-) \n", + " 20-29 10 (10.0) \n", + " 30-39 10 (10.5) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ 10 (13.3) \n", + "sex F 25 (8.1) \n", + " M 25 (7.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London 10 (12.5) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 10 (8.0) \n", + " 2 - (-) \n", + " 3 15 (13.0) \n", + " 4 15 (12.0) \n", + " 5 Least deprived 10 (6.9) \n", + " Unknown - (-) \n", + "dementia No 55 (8.5) \n", + " Yes - (-) \n", + "diabetes No 50 (7.8) \n", + " Yes - (-) \n", + "hypertension No 55 (8.5) \n", + " Yes - (-) \n", + "learning_disability No 55 (8.5) \n", + " Yes - (-) \n", + "\n", + " Mixed 5 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 105 (16.2) \n", + "age_band 0-19 - (-) \n", + " 20-29 15 (15.0) \n", + " 30-39 15 (15.8) \n", + " 40-49 10 (11.8) \n", + " 50-59 10 (13.3) \n", + " 60-69 20 (23.5) \n", + " 70-79 10 (13.3) \n", + " 80+ 20 (26.7) \n", + "sex F 50 (16.1) \n", + " M 55 (16.2) \n", + "region East Midlands 10 (22.2) \n", + " East of England 10 (25.0) \n", + " London 15 (18.8) \n", + " North East 10 (25.0) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West 10 (18.2) \n", + " West Midlands 10 (25.0) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 20 (16.0) \n", + " 2 25 (18.5) \n", + " 3 20 (17.4) \n", + " 4 20 (16.0) \n", + " 5 Least deprived 25 (17.2) \n", + " Unknown - (-) \n", + "dementia No 105 (16.3) \n", + " Yes - (-) \n", + "diabetes No 105 (16.4) \n", + " Yes - (-) \n", + "hypertension No 105 (16.3) \n", + " Yes - (-) \n", + "learning_disability No 105 (16.3) \n", + " Yes - (-) \n", + "\n", + " Mixed 5 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 90 (13.8) \n", + "age_band 0-19 10 (16.7) \n", + " 20-29 10 (10.0) \n", + " 30-39 15 (15.8) \n", + " 40-49 10 (11.8) \n", + " 50-59 10 (13.3) \n", + " 60-69 10 (11.8) \n", + " 70-79 - (-) \n", + " 80+ 10 (13.3) \n", + "sex F 45 (14.5) \n", + " M 45 (13.2) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London 10 (12.5) \n", + " North East - (-) \n", + " North West 10 (28.6) \n", + " South East 10 (22.2) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 15 (12.0) \n", + " 2 15 (11.1) \n", + " 3 15 (13.0) \n", + " 4 15 (12.0) \n", + " 5 Least deprived 30 (20.7) \n", + " Unknown - (-) \n", + "dementia No 85 (13.2) \n", + " Yes - (-) \n", + "diabetes No 85 (13.3) \n", + " Yes - (-) \n", + "hypertension No 90 (14.0) \n", + " Yes - (-) \n", + "learning_disability No 85 (13.2) \n", + " Yes - (-) \n", + "\n", + " White 5 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 285 (43.8) \n", + "age_band 0-19 25 (41.7) \n", + " 20-29 45 (45.0) \n", + " 30-39 35 (36.8) \n", + " 40-49 35 (41.2) \n", + " 50-59 35 (46.7) \n", + " 60-69 45 (52.9) \n", + " 70-79 35 (46.7) \n", + " 80+ 35 (46.7) \n", + "sex F 135 (43.5) \n", + " M 150 (44.1) \n", + "region East Midlands 20 (44.4) \n", + " East of England 15 (37.5) \n", + " London 40 (50.0) \n", + " North East 15 (37.5) \n", + " North West 15 (42.9) \n", + " South East 20 (44.4) \n", + " South West 20 (36.4) \n", + " West Midlands 20 (50.0) \n", + " Yorkshire and the Humber 20 (44.4) \n", + "imd 1 Most deprived 60 (48.0) \n", + " 2 65 (48.1) \n", + " 3 45 (39.1) \n", + " 4 50 (40.0) \n", + " 5 Least deprived 65 (44.8) \n", + " Unknown - (-) \n", + "dementia No 285 (44.2) \n", + " Yes - (-) \n", + "diabetes No 280 (43.8) \n", + " Yes - (-) \n", + "hypertension No 280 (43.4) \n", + " Yes - (-) \n", + "learning_disability No 280 (43.4) \n", + " Yes - (-) \n", + "\n", + " White 5 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 85 (13.1) \n", + "age_band 0-19 10 (16.7) \n", + " 20-29 15 (15.0) \n", + " 30-39 - (-) \n", + " 40-49 10 (11.8) \n", + " 50-59 15 (20.0) \n", + " 60-69 10 (11.8) \n", + " 70-79 15 (20.0) \n", + " 80+ 10 (13.3) \n", + "sex F 35 (11.3) \n", + " M 50 (14.7) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London 15 (18.8) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 10 (8.0) \n", + " 2 20 (14.8) \n", + " 3 15 (13.0) \n", + " 4 15 (12.0) \n", + " 5 Least deprived 25 (17.2) \n", + " Unknown - (-) \n", + "dementia No 85 (13.2) \n", + " Yes - (-) \n", + "diabetes No 85 (13.3) \n", + " Yes - (-) \n", + "hypertension No 85 (13.2) \n", + " Yes - (-) \n", + "learning_disability No 85 (13.2) \n", + " Yes - (-) \n", + "\n", + " White 5 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 95 (14.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 20 (20.0) \n", + " 30-39 15 (15.8) \n", + " 40-49 10 (11.8) \n", + " 50-59 10 (13.3) \n", + " 60-69 20 (23.5) \n", + " 70-79 - (-) \n", + " 80+ 10 (13.3) \n", + "sex F 45 (14.5) \n", + " M 55 (16.2) \n", + "region East Midlands 15 (33.3) \n", + " East of England 10 (25.0) \n", + " London 10 (12.5) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West 10 (18.2) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 20 (16.0) \n", + " 2 20 (14.8) \n", + " 3 20 (17.4) \n", + " 4 20 (16.0) \n", + " 5 Least deprived 20 (13.8) \n", + " Unknown - (-) \n", + "dementia No 95 (14.7) \n", + " Yes - (-) \n", + "diabetes No 95 (14.8) \n", + " Yes - (-) \n", + "hypertension No 95 (14.7) \n", + " Yes - (-) \n", + "learning_disability No 95 (14.7) \n", + " Yes - (-) \n", + "\n", + " Other 5 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 50 (7.7) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 10 (10.5) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 25 (8.1) \n", + " M 20 (5.9) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West 10 (18.2) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 10 (8.0) \n", + " 2 10 (7.4) \n", + " 3 10 (8.7) \n", + " 4 10 (8.0) \n", + " 5 Least deprived 10 (6.9) \n", + " Unknown - (-) \n", + "dementia No 45 (7.0) \n", + " Yes - (-) \n", + "diabetes No 45 (7.0) \n", + " Yes - (-) \n", + "hypertension No 50 (7.8) \n", + " Yes - (-) \n", + "learning_disability No 45 (7.0) \n", + " Yes - (-) \n", + "\n", + " Other 5 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 115 (17.7) \n", + "age_band 0-19 10 (16.7) \n", + " 20-29 20 (20.0) \n", + " 30-39 20 (21.1) \n", + " 40-49 20 (23.5) \n", + " 50-59 15 (20.0) \n", + " 60-69 15 (17.6) \n", + " 70-79 10 (13.3) \n", + " 80+ 15 (20.0) \n", + "sex F 55 (17.7) \n", + " M 60 (17.6) \n", + "region East Midlands 10 (22.2) \n", + " East of England - (-) \n", + " London 10 (12.5) \n", + " North East - (-) \n", + " North West 10 (28.6) \n", + " South East 10 (22.2) \n", + " South West 10 (18.2) \n", + " West Midlands 10 (25.0) \n", + " Yorkshire and the Humber 10 (22.2) \n", + "imd 1 Most deprived 25 (20.0) \n", + " 2 30 (22.2) \n", + " 3 15 (13.0) \n", + " 4 25 (20.0) \n", + " 5 Least deprived 20 (13.8) \n", + " Unknown - (-) \n", + "dementia No 115 (17.8) \n", + " Yes - (-) \n", + "diabetes No 115 (18.0) \n", + " Yes - (-) \n", + "hypertension No 115 (17.8) \n", + " Yes - (-) \n", + "learning_disability No 115 (17.8) \n", + " Yes - (-) \n", + "\n", + " Other 5 PRIMIS:2021 \n", + "group subgroup \n", + "all with records 100 (15.4) \n", + "age_band 0-19 15 (25.0) \n", + " 20-29 15 (15.0) \n", + " 30-39 10 (10.5) \n", + " 40-49 10 (11.8) \n", + " 50-59 15 (20.0) \n", + " 60-69 10 (11.8) \n", + " 70-79 15 (20.0) \n", + " 80+ 10 (13.3) \n", + "sex F 50 (16.1) \n", + " M 50 (14.7) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London 15 (18.8) \n", + " North East 10 (25.0) \n", + " North West 10 (28.6) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands 10 (25.0) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 25 (20.0) \n", + " 2 20 (14.8) \n", + " 3 20 (17.4) \n", + " 4 20 (16.0) \n", + " 5 Least deprived 20 (13.8) \n", + " Unknown - (-) \n", + "dementia No 100 (15.5) \n", + " Yes - (-) \n", + "diabetes No 100 (15.6) \n", + " Yes - (-) \n", + "hypertension No 100 (15.5) \n", + " Yes - (-) \n", + "learning_disability No 100 (15.5) \n", + " Yes - (-) " + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + " \n", + "\n" + ] + } + ], + "source": [ + "local_patient_counts(\n", + " definitions_5, output_path_5,code_dict_5, categories=True,missing=False\n", + " )" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "#### 16 Group" + ] + }, + { + "cell_type": "code", + "execution_count": 368, + "metadata": {}, + "outputs": [], + "source": [ + "### Run quietly to obtain globals for Markdown\n", + "local_patient_counts(\n", + " definitions_16, output_path_16,code_dict_16, categories=True,missing=False,quietly=True\n", + " )" + ] + }, + { + "cell_type": "code", + "execution_count": 369, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "In the `16 group` ethnicity the `Other` ethnic group is expanded to `Chinese` and `Any other ethnic group`. For `Chinese` the SNOMED:2022 codelist is most well-populated (30) and for `Any other ethnic group` the CTV3:2020 codelist is most well populated (30) . \n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"\"\"\n", + "In the `16 group` ethnicity the `Other` ethnic group is expanded to `Chinese` and `Any other ethnic group`. For `Chinese` the SNOMED:2022 codelist is most well-populated ({'{:,.0f}'.format(float('{:,.3g}'.format(df_append_cat_16[\"Chinese_ethnicity_new_16_filled\"][0])))}) and for `Any other ethnic group` the CTV3:2020 codelist is most well populated ({'{:,.0f}'.format(float('{:,.3g}'.format(df_append_cat_16[\"Any_other_ethnic_group_ethnicity_16_filled\"][0])))}) . \n", + "\"\"\"))" + ] + }, + { + "cell_type": "code", + "execution_count": 370, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "##### Ethnicity by 16 group" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"##### Ethnicity by 16 group\"))" + ] + }, + { + "cell_type": "code", + "execution_count": 371, + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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Indian 16 SNOMED:2022Indian 16 CTV3:2020Indian 16 PRIMIS:2021Pakistani 16 SNOMED:2022Pakistani 16 CTV3:2020Pakistani 16 PRIMIS:2021Bangladeshi 16 SNOMED:2022Bangladeshi 16 CTV3:2020Bangladeshi 16 PRIMIS:2021Other Asian 16 SNOMED:2022Other Asian 16 CTV3:2020Other Asian 16 PRIMIS:2021Caribbean 16 SNOMED:2022Caribbean 16 CTV3:2020Caribbean 16 PRIMIS:2021African 16 SNOMED:2022African 16 CTV3:2020African 16 PRIMIS:2021Other Black 16 SNOMED:2022Other Black 16 CTV3:2020Other Black 16 PRIMIS:2021White and Black Caribbean 16 SNOMED:2022White and Black Caribbean 16 CTV3:2020White and Black Caribbean 16 PRIMIS:2021White and Black African 16 SNOMED:2022White and Black African 16 CTV3:2020White and Black African 16 PRIMIS:2021White and Asian 16 SNOMED:2022White and Asian 16 CTV3:2020White and Asian 16 PRIMIS:2021Other Mixed 16 SNOMED:2022Other Mixed 16 CTV3:2020Other Mixed 16 PRIMIS:2021White British 16 SNOMED:2022White British 16 CTV3:2020White British 16 PRIMIS:2021White Irish 16 SNOMED:2022White Irish 16 CTV3:2020White Irish 16 PRIMIS:2021Other White 16 SNOMED:2022Other White 16 CTV3:2020Other White 16 PRIMIS:2021Chinese 16 SNOMED:2022Chinese 16 CTV3:2020Chinese 16 PRIMIS:2021Any other ethnic group 16 SNOMED:2022Any other ethnic group 16 CTV3:2020Any other ethnic group 16 PRIMIS:2021
groupsubgroup
allwith records25 (3.8)45 (6.9)40 (6.2)35 (5.4)25 (3.8)30 (4.6)30 (4.6)20 (3.1)25 (3.8)25 (3.8)35 (5.4)35 (5.4)30 (4.6)25 (3.8)35 (5.4)30 (4.6)30 (4.6)25 (3.8)30 (4.6)30 (4.6)30 (4.6)35 (5.4)40 (6.2)30 (4.6)30 (4.6)25 (3.8)25 (3.8)30 (4.6)30 (4.6)35 (5.4)35 (5.4)35 (5.4)35 (5.4)20 (3.1)35 (5.4)30 (4.6)40 (6.2)35 (5.4)25 (3.8)40 (6.2)25 (3.8)25 (3.8)30 (4.6)30 (4.6)25 (3.8)25 (3.8)30 (4.6)35 (5.4)
age_band0-19- (-)10 (15.4)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (15.4)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
20-29- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (10.5)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (10.5)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
30-39- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (11.8)- (-)10 (11.8)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (11.8)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
40-49- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (11.8)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (11.8)10 (11.8)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (11.8)10 (11.8)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (11.8)- (-)- (-)
50-59- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (12.5)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
60-69- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (11.8)10 (11.8)
70-79- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (13.3)
80+- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
sexF10 (2.8)25 (7.0)15 (4.2)15 (4.2)10 (2.8)15 (4.2)20 (5.6)10 (2.8)15 (4.2)15 (4.2)15 (4.2)15 (4.2)20 (5.6)10 (2.8)20 (5.6)20 (5.6)15 (4.2)15 (4.2)20 (5.6)20 (5.6)15 (4.2)20 (5.6)25 (7.0)15 (4.2)15 (4.2)15 (4.2)15 (4.2)15 (4.2)15 (4.2)20 (5.6)20 (5.6)20 (5.6)20 (5.6)10 (2.8)15 (4.2)20 (5.6)20 (5.6)25 (7.0)10 (2.8)15 (4.2)10 (2.8)15 (4.2)15 (4.2)15 (4.2)15 (4.2)15 (4.2)20 (5.6)20 (5.6)
M15 (5.1)20 (6.8)25 (8.5)20 (6.8)15 (5.1)15 (5.1)10 (3.4)10 (3.4)10 (3.4)10 (3.4)20 (6.8)20 (6.8)10 (3.4)15 (5.1)15 (5.1)10 (3.4)15 (5.1)10 (3.4)10 (3.4)10 (3.4)20 (6.8)20 (6.8)15 (5.1)15 (5.1)10 (3.4)15 (5.1)10 (3.4)15 (5.1)10 (3.4)15 (5.1)10 (3.4)15 (5.1)15 (5.1)10 (3.4)20 (6.8)10 (3.4)20 (6.8)10 (3.4)15 (5.1)20 (6.8)10 (3.4)15 (5.1)15 (5.1)15 (5.1)10 (3.4)10 (3.4)10 (3.4)15 (5.1)
regionEast Midlands- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
East of England- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
London- (-)- (-)- (-)- (-)- (-)- (-)10 (13.3)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (13.3)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
North East- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
North West- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
South East- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
South West- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
West Midlands- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Yorkshire and the Humber- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
imd1 Most deprived- (-)- (-)10 (9.1)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (9.1)- (-)- (-)- (-)- (-)10 (9.1)10 (9.1)- (-)10 (9.1)- (-)- (-)- (-)- (-)- (-)- (-)10 (9.1)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
2- (-)10 (7.7)10 (7.7)- (-)- (-)10 (7.7)- (-)- (-)- (-)- (-)- (-)10 (7.7)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (7.7)10 (7.7)- (-)- (-)- (-)- (-)- (-)- (-)10 (7.7)10 (7.7)- (-)- (-)- (-)- (-)- (-)10 (7.7)- (-)10 (7.7)- (-)- (-)10 (7.7)- (-)- (-)- (-)- (-)15 (11.5)
3- (-)- (-)- (-)10 (6.9)- (-)10 (6.9)10 (6.9)- (-)10 (6.9)10 (6.9)10 (6.9)- (-)- (-)- (-)10 (6.9)- (-)- (-)- (-)- (-)- (-)10 (6.9)10 (6.9)10 (6.9)10 (6.9)10 (6.9)- (-)- (-)- (-)10 (6.9)- (-)- (-)10 (6.9)10 (6.9)- (-)10 (6.9)- (-)10 (6.9)10 (6.9)- (-)- (-)- (-)- (-)- (-)- (-)10 (6.9)- (-)- (-)10 (6.9)
410 (7.1)15 (10.7)10 (7.1)10 (7.1)10 (7.1)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (7.1)- (-)- (-)- (-)- (-)10 (7.1)10 (7.1)10 (7.1)- (-)- (-)10 (7.1)- (-)- (-)- (-)- (-)10 (7.1)10 (7.1)- (-)- (-)- (-)- (-)10 (7.1)10 (7.1)- (-)10 (7.1)- (-)- (-)- (-)- (-)10 (7.1)- (-)10 (7.1)10 (7.1)- (-)
5 Least deprived- (-)- (-)10 (8.3)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (8.3)10 (8.3)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (8.3)- (-)- (-)- (-)- (-)10 (8.3)- (-)- (-)- (-)- (-)10 (8.3)- (-)- (-)- (-)10 (8.3)- (-)- (-)10 (8.3)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Unknown- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
dementiaNo25 (3.9)45 (7.0)40 (6.2)35 (5.4)25 (3.9)30 (4.7)30 (4.7)20 (3.1)25 (3.9)25 (3.9)35 (5.4)35 (5.4)30 (4.7)25 (3.9)35 (5.4)30 (4.7)30 (4.7)25 (3.9)30 (4.7)30 (4.7)30 (4.7)35 (5.4)40 (6.2)30 (4.7)30 (4.7)25 (3.9)25 (3.9)30 (4.7)30 (4.7)35 (5.4)35 (5.4)35 (5.4)35 (5.4)20 (3.1)35 (5.4)30 (4.7)40 (6.2)35 (5.4)25 (3.9)35 (5.4)25 (3.9)25 (3.9)30 (4.7)30 (4.7)25 (3.9)25 (3.9)30 (4.7)35 (5.4)
Yes- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
diabetesNo25 (3.9)45 (7.0)40 (6.2)35 (5.4)25 (3.9)30 (4.7)30 (4.7)20 (3.1)25 (3.9)25 (3.9)35 (5.4)35 (5.4)30 (4.7)25 (3.9)35 (5.4)30 (4.7)30 (4.7)25 (3.9)30 (4.7)30 (4.7)30 (4.7)35 (5.4)40 (6.2)30 (4.7)30 (4.7)25 (3.9)25 (3.9)30 (4.7)25 (3.9)35 (5.4)35 (5.4)35 (5.4)35 (5.4)20 (3.1)35 (5.4)30 (4.7)40 (6.2)35 (5.4)25 (3.9)35 (5.4)20 (3.1)25 (3.9)30 (4.7)30 (4.7)25 (3.9)25 (3.9)25 (3.9)35 (5.4)
Yes- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
hypertensionNo25 (3.9)45 (7.0)40 (6.2)35 (5.4)25 (3.9)30 (4.7)30 (4.7)20 (3.1)25 (3.9)25 (3.9)35 (5.4)35 (5.4)25 (3.9)25 (3.9)30 (4.7)30 (4.7)30 (4.7)25 (3.9)30 (4.7)30 (4.7)30 (4.7)35 (5.4)40 (6.2)30 (4.7)30 (4.7)25 (3.9)25 (3.9)30 (4.7)25 (3.9)35 (5.4)35 (5.4)35 (5.4)35 (5.4)20 (3.1)35 (5.4)30 (4.7)40 (6.2)35 (5.4)25 (3.9)40 (6.2)25 (3.9)25 (3.9)30 (4.7)30 (4.7)25 (3.9)25 (3.9)30 (4.7)35 (5.4)
Yes- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
learning_disabilityNo25 (3.9)45 (7.0)40 (6.2)35 (5.4)25 (3.9)30 (4.7)30 (4.7)20 (3.1)25 (3.9)25 (3.9)35 (5.4)35 (5.4)30 (4.7)25 (3.9)35 (5.4)30 (4.7)30 (4.7)25 (3.9)30 (4.7)30 (4.7)30 (4.7)35 (5.4)40 (6.2)30 (4.7)30 (4.7)25 (3.9)25 (3.9)30 (4.7)30 (4.7)35 (5.4)35 (5.4)35 (5.4)35 (5.4)20 (3.1)35 (5.4)30 (4.7)40 (6.2)35 (5.4)25 (3.9)35 (5.4)25 (3.9)25 (3.9)30 (4.7)30 (4.7)25 (3.9)25 (3.9)30 (4.7)35 (5.4)
Yes- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
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(-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 10 (6.9) \n", + " 4 10 (7.1) \n", + " 5 Least deprived 10 (8.3) \n", + " Unknown - (-) \n", + "dementia No 35 (5.4) \n", + " Yes - (-) \n", + "diabetes No 35 (5.4) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 35 (5.4) \n", + " Yes - (-) \n", + "\n", + " African 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 10 (9.1) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " African 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 10 (11.8) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 10 (9.1) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " African 16 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 25 (3.8) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 25 (3.9) \n", + " Yes - (-) \n", + "diabetes No 25 (3.9) \n", + " Yes - (-) \n", + "hypertension No 25 (3.9) \n", + " Yes - (-) \n", + "learning_disability No 25 (3.9) \n", + " Yes - (-) \n", + "\n", + " Other Black 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 10 (9.1) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " Other Black 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " Other Black 16 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 10 (11.8) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 20 (6.8) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 10 (6.9) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " White and Black Caribbean 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 35 (5.4) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 10 (11.8) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 20 (6.8) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London 10 (13.3) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 10 (6.9) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 35 (5.4) \n", + " Yes - (-) \n", + "diabetes No 35 (5.4) \n", + " Yes - (-) \n", + "hypertension No 35 (5.4) \n", + " Yes - (-) \n", + "learning_disability No 35 (5.4) \n", + " Yes - (-) \n", + "\n", + " White and Black Caribbean 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 40 (6.2) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 10 (12.5) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 25 (7.0) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 10 (7.7) \n", + " 3 10 (6.9) \n", + " 4 - (-) \n", + " 5 Least deprived 10 (8.3) \n", + " Unknown - (-) \n", + "dementia No 40 (6.2) \n", + " Yes - (-) \n", + "diabetes No 40 (6.2) \n", + " Yes - (-) \n", + "hypertension No 40 (6.2) \n", + " Yes - (-) \n", + "learning_disability No 40 (6.2) \n", + " Yes - (-) \n", + "\n", + " White and Black Caribbean 16 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 10 (7.7) \n", + " 3 10 (6.9) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " White and Black African 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 10 (15.4) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 10 (6.9) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " White and Black African 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 25 (3.8) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived 10 (9.1) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 25 (3.9) \n", + " Yes - (-) \n", + "diabetes No 25 (3.9) \n", + " Yes - (-) \n", + "hypertension No 25 (3.9) \n", + " Yes - (-) \n", + "learning_disability No 25 (3.9) \n", + " Yes - (-) \n", + "\n", + " White and Black African 16 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 25 (3.8) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 25 (3.9) \n", + " Yes - (-) \n", + "diabetes No 25 (3.9) \n", + " Yes - (-) \n", + "hypertension No 25 (3.9) \n", + " Yes - (-) \n", + "learning_disability No 25 (3.9) \n", + " Yes - (-) \n", + "\n", + " White and Asian 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 10 (10.5) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived 10 (8.3) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " White and Asian 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 10 (6.9) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 25 (3.9) \n", + " Yes - (-) \n", + "hypertension No 25 (3.9) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " White and Asian 16 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 35 (5.4) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 35 (5.4) \n", + " Yes - (-) \n", + "diabetes No 35 (5.4) \n", + " Yes - (-) \n", + "hypertension No 35 (5.4) \n", + " Yes - (-) \n", + "learning_disability No 35 (5.4) \n", + " Yes - (-) \n", + "\n", + " Other Mixed 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 35 (5.4) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 10 (7.7) \n", + " 3 - (-) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 35 (5.4) \n", + " Yes - (-) \n", + "diabetes No 35 (5.4) \n", + " Yes - (-) \n", + "hypertension No 35 (5.4) \n", + " Yes - (-) \n", + "learning_disability No 35 (5.4) \n", + " Yes - (-) \n", + "\n", + " Other Mixed 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 35 (5.4) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 10 (7.7) \n", + " 3 10 (6.9) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 35 (5.4) \n", + " Yes - (-) \n", + "diabetes No 35 (5.4) \n", + " Yes - (-) \n", + "hypertension No 35 (5.4) \n", + " Yes - (-) \n", + "learning_disability No 35 (5.4) \n", + " Yes - (-) \n", + "\n", + " Other Mixed 16 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 35 (5.4) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 10 (6.9) \n", + " 4 - (-) \n", + " 5 Least deprived 10 (8.3) \n", + " Unknown - (-) \n", + "dementia No 35 (5.4) \n", + " Yes - (-) \n", + "diabetes No 35 (5.4) \n", + " Yes - (-) \n", + "hypertension No 35 (5.4) \n", + " Yes - (-) \n", + "learning_disability No 35 (5.4) \n", + " Yes - (-) \n", + "\n", + " White British 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 20 (3.1) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 10 (2.8) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 20 (3.1) \n", + " Yes - (-) \n", + "diabetes No 20 (3.1) \n", + " Yes - (-) \n", + "hypertension No 20 (3.1) \n", + " Yes - (-) \n", + "learning_disability No 20 (3.1) \n", + " Yes - (-) \n", + "\n", + " White British 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 35 (5.4) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 10 (11.8) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 20 (6.8) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 10 (6.9) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 35 (5.4) \n", + " Yes - (-) \n", + "diabetes No 35 (5.4) \n", + " Yes - (-) \n", + "hypertension No 35 (5.4) \n", + " Yes - (-) \n", + "learning_disability No 35 (5.4) \n", + " Yes - (-) \n", + "\n", + " White British 16 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 10 (11.8) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " White Irish 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 40 (6.2) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 10 (11.8) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 20 (6.8) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 10 (6.9) \n", + " 4 10 (7.1) \n", + " 5 Least deprived 10 (8.3) \n", + " Unknown - (-) \n", + "dementia No 40 (6.2) \n", + " Yes - (-) \n", + "diabetes No 40 (6.2) \n", + " Yes - (-) \n", + "hypertension No 40 (6.2) \n", + " Yes - (-) \n", + "learning_disability No 40 (6.2) \n", + " Yes - (-) \n", + "\n", + " White Irish 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 35 (5.4) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 25 (7.0) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 10 (7.7) \n", + " 3 10 (6.9) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 35 (5.4) \n", + " Yes - (-) \n", + "diabetes No 35 (5.4) \n", + " Yes - (-) \n", + "hypertension No 35 (5.4) \n", + " Yes - (-) \n", + "learning_disability No 35 (5.4) \n", + " Yes - (-) \n", + "\n", + " White Irish 16 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 25 (3.8) \n", + "age_band 0-19 - (-) \n", + " 20-29 10 (10.5) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 10 (2.8) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 25 (3.9) \n", + " Yes - (-) \n", + "diabetes No 25 (3.9) \n", + " Yes - (-) \n", + "hypertension No 25 (3.9) \n", + " Yes - (-) \n", + "learning_disability No 25 (3.9) \n", + " Yes - (-) \n", + "\n", + " Other White 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 40 (6.2) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 20 (6.8) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 10 (7.7) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived 10 (8.3) \n", + " Unknown - (-) \n", + "dementia No 35 (5.4) \n", + " Yes - (-) \n", + "diabetes No 35 (5.4) \n", + " Yes - (-) \n", + "hypertension No 40 (6.2) \n", + " Yes - (-) \n", + "learning_disability No 35 (5.4) \n", + " Yes - (-) \n", + "\n", + " Other White 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 25 (3.8) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 10 (2.8) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 25 (3.9) \n", + " Yes - (-) \n", + "diabetes No 20 (3.1) \n", + " Yes - (-) \n", + "hypertension No 25 (3.9) \n", + " Yes - (-) \n", + "learning_disability No 25 (3.9) \n", + " Yes - (-) \n", + "\n", + " Other White 16 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 25 (3.8) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 25 (3.9) \n", + " Yes - (-) \n", + "diabetes No 25 (3.9) \n", + " Yes - (-) \n", + "hypertension No 25 (3.9) \n", + " Yes - (-) \n", + "learning_disability No 25 (3.9) \n", + " Yes - (-) \n", + "\n", + " Chinese 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 10 (7.7) \n", + " 3 - (-) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " Chinese 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 30 (4.7) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " Chinese 16 PRIMIS:2021 \\\n", + "group subgroup \n", + "all with records 25 (3.8) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 10 (6.9) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 25 (3.9) \n", + " Yes - (-) \n", + "diabetes No 25 (3.9) \n", + " Yes - (-) \n", + "hypertension No 25 (3.9) \n", + " Yes - (-) \n", + "learning_disability No 25 (3.9) \n", + " Yes - (-) \n", + "\n", + " Any other ethnic group 16 SNOMED:2022 \\\n", + "group subgroup \n", + "all with records 25 (3.8) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 10 (11.8) \n", + " 50-59 - (-) \n", + " 60-69 - (-) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 15 (4.2) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 25 (3.9) \n", + " Yes - (-) \n", + "diabetes No 25 (3.9) \n", + " Yes - (-) \n", + "hypertension No 25 (3.9) \n", + " Yes - (-) \n", + "learning_disability No 25 (3.9) \n", + " Yes - (-) \n", + "\n", + " Any other ethnic group 16 CTV3:2020 \\\n", + "group subgroup \n", + "all with records 30 (4.6) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 10 (11.8) \n", + " 70-79 - (-) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 10 (3.4) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 - (-) \n", + " 3 - (-) \n", + " 4 10 (7.1) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 30 (4.7) \n", + " Yes - (-) \n", + "diabetes No 25 (3.9) \n", + " Yes - (-) \n", + "hypertension No 30 (4.7) \n", + " Yes - (-) \n", + "learning_disability No 30 (4.7) \n", + " Yes - (-) \n", + "\n", + " Any other ethnic group 16 PRIMIS:2021 \n", + "group subgroup \n", + "all with records 35 (5.4) \n", + "age_band 0-19 - (-) \n", + " 20-29 - (-) \n", + " 30-39 - (-) \n", + " 40-49 - (-) \n", + " 50-59 - (-) \n", + " 60-69 10 (11.8) \n", + " 70-79 10 (13.3) \n", + " 80+ - (-) \n", + "sex F 20 (5.6) \n", + " M 15 (5.1) \n", + "region East Midlands - (-) \n", + " East of England - (-) \n", + " London - (-) \n", + " North East - (-) \n", + " North West - (-) \n", + " South East - (-) \n", + " South West - (-) \n", + " West Midlands - (-) \n", + " Yorkshire and the Humber - (-) \n", + "imd 1 Most deprived - (-) \n", + " 2 15 (11.5) \n", + " 3 10 (6.9) \n", + " 4 - (-) \n", + " 5 Least deprived - (-) \n", + " Unknown - (-) \n", + "dementia No 35 (5.4) \n", + " Yes - (-) \n", + "diabetes No 35 (5.4) \n", + " Yes - (-) \n", + "hypertension No 35 (5.4) \n", + " Yes - (-) \n", + "learning_disability No 35 (5.4) \n", + " Yes - (-) " + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + " \n", + "\n" + ] + } + ], + "source": [ + "local_patient_counts(\n", + " definitions_16, output_path_16,code_dict_16, categories=True,missing=False\n", + " )" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + " \n", + "\n", + "### Changes in coded ethnicity groups" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "#### 5 Group" + ] + }, + { + "cell_type": "code", + "execution_count": 372, + "metadata": {}, + "outputs": [], + "source": [ + "for definition in definitions_5:\n", + " lowerlist_5 = [x.lower() for x in (list(code_dict_5[definition].values()))]\n", + " df_state_change = pd.read_csv(f'../output/{output_path_5}/simple_state_change_{definition}{suffix}_registered.csv').set_index(definition)\n", + " df_state_change.columns = df_state_change.columns.str.replace(definition + \"_\", \"\")\n", + " #resort rows\n", + " df_state_change = df_state_change.reindex(list(code_dict_5[definition].values()))\n", + " df_state_change = df_state_change.reset_index()\n", + " \n", + " df_state_change[definition]=df_state_change[definition]+\": \" +df_state_change[\"n\"].apply(lambda x: \"{:,.0f}\".format(x))\n", + " df_state_change = df_state_change.set_index(definition)\n", + " globals()[f'df_sc_pct_{definition}'] = df_state_change\n", + " for item in lowerlist_5 + list([\"any\"]):\n", + " df_state_change[item + \"_pct\"]= round(\n", + " (df_state_change[item].div(df_state_change[\"n\"])) * 100, 1\n", + " )\n", + " \n", + " df_state_change[item] = (\n", + " df_state_change[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_state_change[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_state_change=df_state_change[lowerlist_5 + list([\"any\"])]\n", + " df_state_change = df_state_change.replace(\"nan (nan)\", \"- (-)\")\n", + " df_state_change = df_state_change.reset_index()\n", + " df_state_change = df_state_change.rename(definition_dict, axis='columns')\n", + " df_state_change.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_state_change = df_state_change.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " # display(df_state_change)" + ] + }, + { + "cell_type": "code", + "execution_count": 373, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "Patients whose latest recorded ethnicity were grouped as `Mixed` were most likely to have a discordant ethnicity recording (64% SNOMED:2022, 62% CTV3:2020, 72% PRIMIS:2021). All three codelists had patients with latest recorded ethnicity grouped as `Black` who also had a recorded ethnicity of `White` (nan% SNOMED:2022, nan% CTV3:2020, 10% PRIMIS:2021). \n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"\"\"\n", + "Patients whose latest recorded ethnicity were grouped as `Mixed` were most likely to have a discordant ethnicity recording ({'{:,.0f}'.format(df_sc_pct_ethnicity_new_5[\"any_pct\"][2])}% SNOMED:2022, {'{:,.0f}'.format(df_sc_pct_ethnicity_5[\"any_pct\"][2])}% CTV3:2020, {'{:,.0f}'.format(df_sc_pct_ethnicity_primis_5[\"any_pct\"][2])}% PRIMIS:2021). All three codelists had patients with latest recorded ethnicity grouped as `Black` who also had a recorded ethnicity of `White` ({'{:,.0f}'.format(df_sc_pct_ethnicity_new_5[\"white_pct\"][1])}% SNOMED:2022, {'{:,.0f}'.format(df_sc_pct_ethnicity_5[\"white_pct\"][1])}% CTV3:2020, {'{:,.0f}'.format(df_sc_pct_ethnicity_primis_5[\"white_pct\"][1])}% PRIMIS:2021). \n", + "\"\"\"))" + ] + }, + { + "cell_type": "code", + "execution_count": 374, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "##### Changes in 5 SNOMED:2022 ethnicity" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/html": [ + "
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asianblackmixedwhiteotherany
Latest Ethnicity-\n", + "\n", + "5 SNOMED:2022
Asian: 45- (-)- (-)- (-)- (-)- (-)30 (66.7)
Black: 50- (-)- (-)- (-)- (-)- (-)30 (60.0)
Mixed: 55- (-)- (-)- (-)- (-)- (-)35 (63.6)
White: 28525 (8.8)30 (10.5)25 (8.8)25 (8.8)25 (8.8)205 (71.9)
Other: 50- (-)- (-)- (-)- (-)- (-)35 (70.0)
\n", + "
" + ], + "text/plain": [ + " asian black mixed white \\\n", + "Latest Ethnicity-\\n\\n5 SNOMED:2022 \n", + "Asian: 45 - (-) - (-) - (-) - (-) \n", + "Black: 50 - (-) - (-) - (-) - (-) \n", + "Mixed: 55 - (-) - (-) - (-) - (-) \n", + "White: 285 25 (8.8) 30 (10.5) 25 (8.8) 25 (8.8) \n", + "Other: 50 - (-) - (-) - (-) - (-) \n", + "\n", + " other any \n", + "Latest Ethnicity-\\n\\n5 SNOMED:2022 \n", + "Asian: 45 - (-) 30 (66.7) \n", + "Black: 50 - (-) 30 (60.0) \n", + "Mixed: 55 - (-) 35 (63.6) \n", + "White: 285 25 (8.8) 205 (71.9) \n", + "Other: 50 - (-) 35 (70.0) " + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + " \n", + "\n" + ] + }, + { + "data": { + "text/markdown": [ + "##### Changes in 5 CTV3:2020 ethnicity" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/html": [ + "
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asianblackmixedwhiteotherany
Latest Ethnicity-\n", + "\n", + "5 CTV3:2020
Asian: 10010 (10.0)10 (10.0)10 (10.0)10 (10.0)15 (15.0)65 (65.0)
Black: 8510 (11.8)10 (11.8)10 (11.8)- (-)10 (11.8)55 (64.7)
Mixed: 10515 (14.3)10 (9.5)10 (9.5)10 (9.5)10 (9.5)65 (61.9)
White: 85- (-)10 (11.8)10 (11.8)10 (11.8)10 (11.8)60 (70.6)
Other: 11510 (8.7)10 (8.7)- (-)15 (13.0)10 (8.7)80 (69.6)
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" + ], + "text/plain": [ + " asian black mixed white \\\n", + "Latest Ethnicity-\\n\\n5 CTV3:2020 \n", + "Asian: 100 10 (10.0) 10 (10.0) 10 (10.0) 10 (10.0) \n", + "Black: 85 10 (11.8) 10 (11.8) 10 (11.8) - (-) \n", + "Mixed: 105 15 (14.3) 10 (9.5) 10 (9.5) 10 (9.5) \n", + "White: 85 - (-) 10 (11.8) 10 (11.8) 10 (11.8) \n", + "Other: 115 10 (8.7) 10 (8.7) - (-) 15 (13.0) \n", + "\n", + " other any \n", + "Latest Ethnicity-\\n\\n5 CTV3:2020 \n", + "Asian: 100 15 (15.0) 65 (65.0) \n", + "Black: 85 10 (11.8) 55 (64.7) \n", + "Mixed: 105 10 (9.5) 65 (61.9) \n", + "White: 85 10 (11.8) 60 (70.6) \n", + "Other: 115 10 (8.7) 80 (69.6) " + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + " \n", + "\n" + ] + }, + { + "data": { + "text/markdown": [ + "##### Changes in 5 PRIMIS:2021 ethnicity" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/html": [ + "
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asianblackmixedwhiteotherany
Latest Ethnicity-\n", + "\n", + "5 PRIMIS:2021
Asian: 9510 (10.5)10 (10.5)10 (10.5)- (-)- (-)70 (73.7)
Black: 9515 (15.8)- (-)10 (10.5)10 (10.5)10 (10.5)65 (68.4)
Mixed: 9010 (11.1)- (-)- (-)- (-)10 (11.1)65 (72.2)
White: 95- (-)- (-)10 (10.5)10 (10.5)- (-)75 (78.9)
Other: 10010 (10.0)10 (10.0)10 (10.0)10 (10.0)10 (10.0)60 (60.0)
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" + ], + "text/plain": [ + " asian black mixed \\\n", + "Latest Ethnicity-\\n\\n5 PRIMIS:2021 \n", + "Asian: 95 10 (10.5) 10 (10.5) 10 (10.5) \n", + "Black: 95 15 (15.8) - (-) 10 (10.5) \n", + "Mixed: 90 10 (11.1) - (-) - (-) \n", + "White: 95 - (-) - (-) 10 (10.5) \n", + "Other: 100 10 (10.0) 10 (10.0) 10 (10.0) \n", + "\n", + " white other any \n", + "Latest Ethnicity-\\n\\n5 PRIMIS:2021 \n", + "Asian: 95 - (-) - (-) 70 (73.7) \n", + "Black: 95 10 (10.5) 10 (10.5) 65 (68.4) \n", + "Mixed: 90 - (-) 10 (11.1) 65 (72.2) \n", + "White: 95 10 (10.5) - (-) 75 (78.9) \n", + "Other: 100 10 (10.0) 10 (10.0) 60 (60.0) " + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + " \n", + "\n" + ] + } + ], + "source": [ + "for definition in definitions_5:\n", + " lowerlist_5 = [x.lower() for x in (list(code_dict_5[definition].values()))]\n", + " df_state_change = pd.read_csv(f'../output/{output_path_5}/simple_state_change_{definition}{suffix}_registered.csv').set_index(definition)\n", + " df_state_change.columns = df_state_change.columns.str.replace(definition + \"_\", \"\")\n", + " #resort rows\n", + " df_state_change = df_state_change.reindex(list(code_dict_5[definition].values()))\n", + " df_state_change = df_state_change.reset_index()\n", + " \n", + " df_state_change[definition]=df_state_change[definition]+\": \" +df_state_change[\"n\"].apply(lambda x: \"{:,.0f}\".format(x))\n", + " df_state_change = df_state_change.set_index(definition)\n", + " # globals()[f'df_sc_pct_{definition}'] = df_state_change\n", + " for item in lowerlist_5 + list([\"any\"]):\n", + " df_state_change[item + \"_pct\"]= round(\n", + " (df_state_change[item].div(df_state_change[\"n\"])) * 100, 1\n", + " )\n", + " \n", + " df_state_change[item] = (\n", + " df_state_change[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_state_change[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_state_change=df_state_change[lowerlist_5 + list([\"any\"])]\n", + " df_state_change = df_state_change.replace(\"nan (nan)\", \"- (-)\")\n", + " df_state_change = df_state_change.reset_index()\n", + " df_state_change = df_state_change.rename(definition_dict, axis='columns')\n", + " df_state_change.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_state_change = df_state_change.set_index(f'Latest Ethnicity-\\n\\n{definition_dict[definition]}')\n", + " display(Markdown(f\"##### Changes in {definition_dict[definition]} ethnicity\"))\n", + " display(df_state_change)\n", + " print(\" \\n\")" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "#### 16 Group" + ] + }, + { + "cell_type": "code", + "execution_count": 375, + "metadata": {}, + "outputs": [], + "source": [ + "for definition in definitions_16:\n", + " lowerlist_16 = [x.lower() for x in (list(code_dict_16[definition].values()))]\n", + " df_state_change = pd.read_csv(f'../output/{output_path_16}/simple_state_change_{definition}{suffix}_registered.csv').set_index(definition)\n", + " df_state_change.columns = df_state_change.columns.str.replace(definition + \"_\", \"\")\n", + " df_state_change.columns = df_state_change.columns.str.lower()\n", + " #resort rows\n", + " df_state_change = df_state_change.reindex(list(code_dict_16[definition].values()))\n", + " df_state_change = df_state_change.reset_index()\n", + " \n", + " df_state_change[definition]=df_state_change[definition]+\": \" +df_state_change[\"n\"].apply(lambda x: \"{:,.0f}\".format(x))\n", + " df_state_change = df_state_change.set_index(definition)\n", + " globals()[f'df_sc_pct_{definition}'] = df_state_change\n", + " for item in lowerlist_16 + list([\"any\"]):\n", + " df_state_change[item + \"_pct\"]= round(\n", + " (df_state_change[item].div(df_state_change[\"n\"])) * 100, 1\n", + " )\n", + " \n", + " df_state_change[item] = (\n", + " df_state_change[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_state_change[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_state_change=df_state_change[lowerlist_16+ list([\"any\"])]\n", + " df_state_change = df_state_change.replace(\"nan (nan)\", \"- (-)\")\n", + " df_state_change = df_state_change.reset_index()\n", + " df_state_change = df_state_change.rename(definition_dict, axis='columns')\n", + " df_state_change.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_state_change = df_state_change.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_state_change.columns = df_state_change.columns.str.replace(\"_\", \" \")\n", + " # display(df_state_change)" + ] + }, + { + "cell_type": "code", + "execution_count": 376, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "Patients whose latest recorded ethnicity were grouped as `Other Black` were most likely to have a discordant ethnicity recording (67% SNOMED:2022, 50% CTV3:2020, 67% PRIMIS:2021).\n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"\"\"\n", + "Patients whose latest recorded ethnicity were grouped as `Other Black` were most likely to have a discordant ethnicity recording ({'{:,.0f}'.format(df_sc_pct_ethnicity_new_16[\"any_pct\"][6])}% SNOMED:2022, {'{:,.0f}'.format(df_sc_pct_ethnicity_16[\"any_pct\"][6])}% CTV3:2020, {'{:,.0f}'.format(df_sc_pct_ethnicity_primis_16[\"any_pct\"][6])}% PRIMIS:2021).\n", + "\"\"\"))" + ] + }, + { + "cell_type": "code", + "execution_count": 377, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "##### Changes in 16 SNOMED:2022 ethnicity" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/html": [ + "
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indianpakistanibangladeshiother asiancaribbeanafricanother blackwhite and black caribbeanwhite and black africanwhite and asianother mixedwhite britishwhite irishother whitechineseany other ethnic groupany
Latest Ethnicity-\n", + "16 SNOMED:2022
Indian: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (80.0)
Pakistani: 35- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (71.4)
Bangladeshi: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (50.0)
Other_Asian: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (60.0)
Caribbean: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (66.7)
African: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (66.7)
Other_Black: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (66.7)
White_and_Black_Caribbean: 35- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (71.4)
White_and_Black_African: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (66.7)
White_and_Asian: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (66.7)
Other_Mixed: 35- (-)- (-)- (-)- (-)10 (28.6)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (57.1)
White_British: 20- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (75.0)
White_Irish: 40- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (62.5)
Other_White: 40- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (62.5)
Chinese: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (66.7)
Any_other_ethnic_group: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (60.0)
\n", + "
" + ], + "text/plain": [ + " indian pakistani bangladeshi other asian \\\n", + "Latest Ethnicity-\\n16 SNOMED:2022 \n", + "Indian: 25 - (-) - (-) - (-) - (-) \n", + "Pakistani: 35 - (-) - (-) - (-) - (-) \n", + "Bangladeshi: 30 - (-) - (-) - (-) - (-) \n", + "Other_Asian: 25 - (-) - (-) - (-) - (-) \n", + "Caribbean: 30 - (-) - (-) - (-) - (-) \n", + "African: 30 - (-) - (-) - (-) - (-) \n", + "Other_Black: 30 - (-) - (-) - (-) - (-) \n", + "White_and_Black_Caribbean: 35 - (-) - (-) - (-) - (-) \n", + "White_and_Black_African: 30 - (-) - (-) - (-) - (-) \n", + "White_and_Asian: 30 - (-) - (-) - (-) - (-) \n", + "Other_Mixed: 35 - (-) - (-) - (-) - (-) \n", + "White_British: 20 - (-) - (-) - (-) - (-) \n", + "White_Irish: 40 - (-) - (-) - (-) - (-) \n", + "Other_White: 40 - (-) - (-) - (-) - (-) \n", + "Chinese: 30 - (-) - (-) - (-) - (-) \n", + "Any_other_ethnic_group: 25 - (-) - (-) - (-) - (-) \n", + "\n", + " caribbean african other black \\\n", + "Latest Ethnicity-\\n16 SNOMED:2022 \n", + "Indian: 25 - (-) - (-) - (-) \n", + "Pakistani: 35 - (-) - (-) - (-) \n", + "Bangladeshi: 30 - (-) - (-) - (-) \n", + "Other_Asian: 25 - (-) - (-) - (-) \n", + "Caribbean: 30 - (-) - (-) - (-) \n", + "African: 30 - (-) - (-) - (-) \n", + "Other_Black: 30 - (-) - (-) - (-) \n", + "White_and_Black_Caribbean: 35 - (-) - (-) - (-) \n", + "White_and_Black_African: 30 - (-) - (-) - (-) \n", + "White_and_Asian: 30 - (-) - (-) - (-) \n", + "Other_Mixed: 35 10 (28.6) - (-) - (-) \n", + "White_British: 20 - (-) - (-) - (-) \n", + "White_Irish: 40 - (-) - (-) - (-) \n", + "Other_White: 40 - (-) - (-) - (-) \n", + "Chinese: 30 - (-) - (-) - (-) \n", + "Any_other_ethnic_group: 25 - (-) - (-) - (-) \n", + "\n", + " white and black caribbean \\\n", + "Latest Ethnicity-\\n16 SNOMED:2022 \n", + "Indian: 25 - (-) \n", + "Pakistani: 35 - (-) \n", + "Bangladeshi: 30 - (-) \n", + "Other_Asian: 25 - (-) \n", + "Caribbean: 30 - (-) \n", + "African: 30 - (-) \n", + "Other_Black: 30 - (-) \n", + "White_and_Black_Caribbean: 35 - (-) \n", + "White_and_Black_African: 30 - (-) \n", + "White_and_Asian: 30 - (-) \n", + "Other_Mixed: 35 - (-) \n", + "White_British: 20 - (-) \n", + "White_Irish: 40 - (-) \n", + "Other_White: 40 - (-) \n", + "Chinese: 30 - (-) \n", + "Any_other_ethnic_group: 25 - (-) \n", + "\n", + " white and black african white and asian \\\n", + "Latest Ethnicity-\\n16 SNOMED:2022 \n", + "Indian: 25 - (-) - (-) \n", + "Pakistani: 35 - (-) - (-) \n", + "Bangladeshi: 30 - (-) - (-) \n", + "Other_Asian: 25 - (-) - (-) \n", + "Caribbean: 30 - (-) - (-) \n", + "African: 30 - (-) - (-) \n", + "Other_Black: 30 - (-) - (-) \n", + "White_and_Black_Caribbean: 35 - (-) - (-) \n", + "White_and_Black_African: 30 - (-) - (-) \n", + "White_and_Asian: 30 - (-) - (-) \n", + "Other_Mixed: 35 - (-) - (-) \n", + "White_British: 20 - (-) - (-) \n", + "White_Irish: 40 - (-) - (-) \n", + "Other_White: 40 - (-) - (-) \n", + "Chinese: 30 - (-) - (-) \n", + "Any_other_ethnic_group: 25 - (-) - (-) \n", + "\n", + " other mixed white british white irish \\\n", + "Latest Ethnicity-\\n16 SNOMED:2022 \n", + "Indian: 25 - (-) - (-) - (-) \n", + "Pakistani: 35 - (-) - (-) - (-) \n", + "Bangladeshi: 30 - (-) - (-) - (-) \n", + "Other_Asian: 25 - (-) - (-) - (-) \n", + "Caribbean: 30 - (-) - (-) - (-) \n", + "African: 30 - (-) - (-) - (-) \n", + "Other_Black: 30 - (-) - (-) - (-) \n", + "White_and_Black_Caribbean: 35 - (-) - (-) - (-) \n", + "White_and_Black_African: 30 - (-) - (-) - (-) \n", + "White_and_Asian: 30 - (-) - (-) - (-) \n", + "Other_Mixed: 35 - (-) - (-) - (-) \n", + "White_British: 20 - (-) - (-) - (-) \n", + "White_Irish: 40 - (-) - (-) - (-) \n", + "Other_White: 40 - (-) - (-) - (-) \n", + "Chinese: 30 - (-) - (-) - (-) \n", + "Any_other_ethnic_group: 25 - (-) - (-) - (-) \n", + "\n", + " other white chinese any other ethnic group \\\n", + "Latest Ethnicity-\\n16 SNOMED:2022 \n", + "Indian: 25 - (-) - (-) - (-) \n", + "Pakistani: 35 - (-) - (-) - (-) \n", + "Bangladeshi: 30 - (-) - (-) - (-) \n", + "Other_Asian: 25 - (-) - (-) - (-) \n", + "Caribbean: 30 - (-) - (-) - (-) \n", + "African: 30 - (-) - (-) - (-) \n", + "Other_Black: 30 - (-) - (-) - (-) \n", + "White_and_Black_Caribbean: 35 - (-) - (-) - (-) \n", + "White_and_Black_African: 30 - (-) - (-) - (-) \n", + "White_and_Asian: 30 - (-) - (-) - (-) \n", + "Other_Mixed: 35 - (-) - (-) - (-) \n", + "White_British: 20 - (-) - (-) - (-) \n", + "White_Irish: 40 - (-) - (-) - (-) \n", + "Other_White: 40 - (-) - (-) - (-) \n", + "Chinese: 30 - (-) - (-) - (-) \n", + "Any_other_ethnic_group: 25 - (-) - (-) - (-) \n", + "\n", + " any \n", + "Latest Ethnicity-\\n16 SNOMED:2022 \n", + "Indian: 25 20 (80.0) \n", + "Pakistani: 35 25 (71.4) \n", + "Bangladeshi: 30 15 (50.0) \n", + "Other_Asian: 25 15 (60.0) \n", + "Caribbean: 30 20 (66.7) \n", + "African: 30 20 (66.7) \n", + "Other_Black: 30 20 (66.7) \n", + "White_and_Black_Caribbean: 35 25 (71.4) \n", + "White_and_Black_African: 30 20 (66.7) \n", + "White_and_Asian: 30 20 (66.7) \n", + "Other_Mixed: 35 20 (57.1) \n", + "White_British: 20 15 (75.0) \n", + "White_Irish: 40 25 (62.5) \n", + "Other_White: 40 25 (62.5) \n", + "Chinese: 30 20 (66.7) \n", + "Any_other_ethnic_group: 25 15 (60.0) " + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + " \n", + "\n" + ] + }, + { + "data": { + "text/markdown": [ + "##### Changes in 16 CTV3:2020 ethnicity" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/html": [ + "
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Latest Ethnicity-\n", + "16 CTV3:2020
Indian: 45- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)10 (22.2)- (-)30 (66.7)
Pakistani: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (80.0)
Bangladeshi: 20- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (75.0)
Other_Asian: 35- (-)- (-)- (-)- (-)- (-)- (-)10 (28.6)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (71.4)
Caribbean: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (60.0)
African: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (66.7)
Other_Black: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (50.0)
White_and_Black_Caribbean: 40- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)30 (75.0)
White_and_Black_African: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (100.0)
White_and_Asian: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (66.7)
Other_Mixed: 35- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (71.4)
White_British: 35- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (57.1)
White_Irish: 35- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (57.1)
Other_White: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (60.0)
Chinese: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (66.7)
Any_other_ethnic_group: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (50.0)
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indianpakistanibangladeshiother asiancaribbeanafricanother blackwhite and black caribbeanwhite and black africanwhite and asianother mixedwhite britishwhite irishother whitechineseany other ethnic groupany
Latest Ethnicity-\n", + "16 PRIMIS:2021
Indian: 40- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)30 (75.0)
Pakistani: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (50.0)
Bangladeshi: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (60.0)
Other_Asian: 35- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (57.1)
Caribbean: 35- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (57.1)
African: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (80.0)
Other_Black: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (66.7)
White_and_Black_Caribbean: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (83.3)
White_and_Black_African: 25- (-)- (-)10 (40.0)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (80.0)
White_and_Asian: 35- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (71.4)
Other_Mixed: 35- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (71.4)
White_British: 30- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (83.3)
White_Irish: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (80.0)
Other_White: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)20 (80.0)
Chinese: 25- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)15 (60.0)
Any_other_ethnic_group: 35- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)25 (71.4)
\n", + "
" + ], + "text/plain": [ + " indian pakistani bangladeshi other asian \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian: 40 - (-) - (-) - (-) - (-) \n", + "Pakistani: 30 - (-) - (-) - (-) - (-) \n", + "Bangladeshi: 25 - (-) - (-) - (-) - (-) \n", + "Other_Asian: 35 - (-) - (-) - (-) - (-) \n", + "Caribbean: 35 - (-) - (-) - (-) - (-) \n", + "African: 25 - (-) - (-) - (-) - (-) \n", + "Other_Black: 30 - (-) - (-) - (-) - (-) \n", + "White_and_Black_Caribbean: 30 - (-) - (-) - (-) - (-) \n", + "White_and_Black_African: 25 - (-) - (-) 10 (40.0) - (-) \n", + "White_and_Asian: 35 - (-) - (-) - (-) - (-) \n", + "Other_Mixed: 35 - (-) - (-) - (-) - (-) \n", + "White_British: 30 - (-) - (-) - (-) - (-) \n", + "White_Irish: 25 - (-) - (-) - (-) - (-) \n", + "Other_White: 25 - (-) - (-) - (-) - (-) \n", + "Chinese: 25 - (-) - (-) - (-) - (-) \n", + "Any_other_ethnic_group: 35 - (-) - (-) - (-) - (-) \n", + "\n", + " caribbean african other black \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian: 40 - (-) - (-) - (-) \n", + "Pakistani: 30 - (-) - (-) - (-) \n", + "Bangladeshi: 25 - (-) - (-) - (-) \n", + "Other_Asian: 35 - (-) - (-) - (-) \n", + "Caribbean: 35 - (-) - (-) - (-) \n", + "African: 25 - (-) - (-) - (-) \n", + "Other_Black: 30 - (-) - (-) - (-) \n", + "White_and_Black_Caribbean: 30 - (-) - (-) - (-) \n", + "White_and_Black_African: 25 - (-) - (-) - (-) \n", + "White_and_Asian: 35 - (-) - (-) - (-) \n", + "Other_Mixed: 35 - (-) - (-) - (-) \n", + "White_British: 30 - (-) - (-) - (-) \n", + "White_Irish: 25 - (-) - (-) - (-) \n", + "Other_White: 25 - (-) - (-) - (-) \n", + "Chinese: 25 - (-) - (-) - (-) \n", + "Any_other_ethnic_group: 35 - (-) - (-) - (-) \n", + "\n", + " white and black caribbean \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian: 40 - (-) \n", + "Pakistani: 30 - (-) \n", + "Bangladeshi: 25 - (-) \n", + "Other_Asian: 35 - (-) \n", + "Caribbean: 35 - (-) \n", + "African: 25 - (-) \n", + "Other_Black: 30 - (-) \n", + "White_and_Black_Caribbean: 30 - (-) \n", + "White_and_Black_African: 25 - (-) \n", + "White_and_Asian: 35 - (-) \n", + "Other_Mixed: 35 - (-) \n", + "White_British: 30 - (-) \n", + "White_Irish: 25 - (-) \n", + "Other_White: 25 - (-) \n", + "Chinese: 25 - (-) \n", + "Any_other_ethnic_group: 35 - (-) \n", + "\n", + " white and black african white and asian \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian: 40 - (-) - (-) \n", + "Pakistani: 30 - (-) - (-) \n", + "Bangladeshi: 25 - (-) - (-) \n", + "Other_Asian: 35 - (-) - (-) \n", + "Caribbean: 35 - (-) - (-) \n", + "African: 25 - (-) - (-) \n", + "Other_Black: 30 - (-) - (-) \n", + "White_and_Black_Caribbean: 30 - (-) - (-) \n", + "White_and_Black_African: 25 - (-) - (-) \n", + "White_and_Asian: 35 - (-) - (-) \n", + "Other_Mixed: 35 - (-) - (-) \n", + "White_British: 30 - (-) - (-) \n", + "White_Irish: 25 - (-) - (-) \n", + "Other_White: 25 - (-) - (-) \n", + "Chinese: 25 - (-) - (-) \n", + "Any_other_ethnic_group: 35 - (-) - (-) \n", + "\n", + " other mixed white british white irish \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian: 40 - (-) - (-) - (-) \n", + "Pakistani: 30 - (-) - (-) - (-) \n", + "Bangladeshi: 25 - (-) - (-) - (-) \n", + "Other_Asian: 35 - (-) - (-) - (-) \n", + "Caribbean: 35 - (-) - (-) - (-) \n", + "African: 25 - (-) - (-) - (-) \n", + "Other_Black: 30 - (-) - (-) - (-) \n", + "White_and_Black_Caribbean: 30 - (-) - (-) - (-) \n", + "White_and_Black_African: 25 - (-) - (-) - (-) \n", + "White_and_Asian: 35 - (-) - (-) - (-) \n", + "Other_Mixed: 35 - (-) - (-) - (-) \n", + "White_British: 30 - (-) - (-) - (-) \n", + "White_Irish: 25 - (-) - (-) - (-) \n", + "Other_White: 25 - (-) - (-) - (-) \n", + "Chinese: 25 - (-) - (-) - (-) \n", + "Any_other_ethnic_group: 35 - (-) - (-) - (-) \n", + "\n", + " other white chinese any other ethnic group \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian: 40 - (-) - (-) - (-) \n", + "Pakistani: 30 - (-) - (-) - (-) \n", + "Bangladeshi: 25 - (-) - (-) - (-) \n", + "Other_Asian: 35 - (-) - (-) - (-) \n", + "Caribbean: 35 - (-) - (-) - (-) \n", + "African: 25 - (-) - (-) - (-) \n", + "Other_Black: 30 - (-) - (-) - (-) \n", + "White_and_Black_Caribbean: 30 - (-) - (-) - (-) \n", + "White_and_Black_African: 25 - (-) - (-) - (-) \n", + "White_and_Asian: 35 - (-) - (-) - (-) \n", + "Other_Mixed: 35 - (-) - (-) - (-) \n", + "White_British: 30 - (-) - (-) - (-) \n", + "White_Irish: 25 - (-) - (-) - (-) \n", + "Other_White: 25 - (-) - (-) - (-) \n", + "Chinese: 25 - (-) - (-) - (-) \n", + "Any_other_ethnic_group: 35 - (-) - (-) - (-) \n", + "\n", + " any \n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian: 40 30 (75.0) \n", + "Pakistani: 30 15 (50.0) \n", + "Bangladeshi: 25 15 (60.0) \n", + "Other_Asian: 35 20 (57.1) \n", + "Caribbean: 35 20 (57.1) \n", + "African: 25 20 (80.0) \n", + "Other_Black: 30 20 (66.7) \n", + "White_and_Black_Caribbean: 30 25 (83.3) \n", + "White_and_Black_African: 25 20 (80.0) \n", + "White_and_Asian: 35 25 (71.4) \n", + "Other_Mixed: 35 25 (71.4) \n", + "White_British: 30 25 (83.3) \n", + "White_Irish: 25 20 (80.0) \n", + "Other_White: 25 20 (80.0) \n", + "Chinese: 25 15 (60.0) \n", + "Any_other_ethnic_group: 35 25 (71.4) " + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + " \n", + "\n" + ] + } + ], + "source": [ + "for definition in definitions_16:\n", + " lowerlist_16 = [x.lower() for x in (list(code_dict_16[definition].values()))]\n", + " df_state_change = pd.read_csv(f'../output/{output_path_16}/simple_state_change_{definition}{suffix}_registered.csv').set_index(definition)\n", + " df_state_change.columns = df_state_change.columns.str.replace(definition + \"_\", \"\")\n", + " df_state_change.columns = df_state_change.columns.str.lower()\n", + " #resort rows\n", + " df_state_change = df_state_change.reindex(list(code_dict_16[definition].values()))\n", + " df_state_change = df_state_change.reset_index()\n", + " \n", + " df_state_change[definition]=df_state_change[definition]+\": \" +df_state_change[\"n\"].apply(lambda x: \"{:,.0f}\".format(x))\n", + " df_state_change = df_state_change.set_index(definition)\n", + " globals()[f'df_sc_pct_{definition}'] = df_state_change\n", + " for item in lowerlist_16 + list([\"any\"]):\n", + " df_state_change[item + \"_pct\"]= round(\n", + " (df_state_change[item].div(df_state_change[\"n\"])) * 100, 1\n", + " )\n", + " \n", + " df_state_change[item] = (\n", + " df_state_change[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_state_change[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_state_change=df_state_change[lowerlist_16+ list([\"any\"])]\n", + " df_state_change = df_state_change.replace(\"nan (nan)\", \"- (-)\")\n", + " df_state_change = df_state_change.reset_index()\n", + " df_state_change = df_state_change.rename(definition_dict, axis='columns')\n", + " df_state_change.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_state_change = df_state_change.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_state_change.columns = df_state_change.columns.str.replace(\"_\", \" \")\n", + " display(Markdown(f\"##### Changes in {definition_dict[definition]} ethnicity\"))\n", + " display(df_state_change)\n", + " print(\" \\n\")" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + " \n", + "\n", + "### Comparison of 'Latest' and 'Most Frequent' coded ethnicity" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "#### 5 Group" + ] + }, + { + "cell_type": "code", + "execution_count": 378, + "metadata": {}, + "outputs": [], + "source": [ + "from cmath import isnan\n", + "\n", + "\n", + "for definition in definitions_5:\n", + " df_sum = pd.read_csv(f'../output/{output_path_5}/simple_latest_common_{definition}{suffix}_registered.csv').set_index(definition)\n", + " # sort rows by category index\n", + " df_sum.columns = df_sum.columns.str.replace(definition + \"_\", \"\")\n", + " df_sum.columns = df_sum.columns.str.lower()\n", + " df_sum = df_sum.reindex(list(code_dict_5[definition].values()))\n", + " df_sum = df_sum[lowerlist_5]\n", + " df_counts = pd.DataFrame(\n", + " np.diagonal(df_sum),\n", + " index=df_sum.index,\n", + " # columns=[f\"matching (n={np.diagonal(df_sum).sum()})\"],\n", + " )\n", + "\n", + " df_sum2 = df_sum.copy(deep=True)\n", + " np.fill_diagonal(df_sum2.values, 0)\n", + " df_diag = pd.DataFrame(\n", + " df_sum2.sum(axis=1),\n", + " )\n", + " df_out = df_counts.merge(df_diag, right_index=True, left_index=True)\n", + " columns=round(df_out.sum()/df_out.sum(axis=1).sum()*100,1)\n", + " globals()[f'df_col_{definition}'] = columns\n", + " df_out.columns=[f\"matching ({columns[0]}%)\",f\"not matching ({columns[1]}%)\"]\n", + " df_out = df_out.reset_index()\n", + " df_out = df_out.rename(definition_dict, axis='columns')\n", + " df_out.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_out = df_out.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_out = df_out.replace(np.nan, \"-\")\n", + " # display(df_out)\n", + " \n", + " if code_dict_5 != \"\":\n", + " lowerlist_5 = [x.lower() for x in (list(code_dict_5[definition].values()))]\n", + " df_sum = df_sum[lowerlist_5]\n", + " else:\n", + " df_sum = df_sum.reindex(sorted(df_sum.columns), axis=1)\n", + "\n", + " # Combine count and percentage columns\n", + " df_sum[\"population\"]=df_sum.sum(axis = 1)\n", + " globals()[f'df_sum_pct_{definition}'] = df_sum\n", + " for item in lowerlist_5:\n", + " df_sum[item + \"_pct\"]= round(\n", + " (df_sum[item].div(df_sum[\"population\"])) * 100, 1\n", + " )\n", + " df_sum[item] = (\n", + " df_sum[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_sum[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_sum = df_sum[lowerlist_5]\n", + " df_sum = df_sum.reset_index()\n", + " df_sum = df_sum.replace(\"nan (nan)\", \"- (-)\")\n", + " df_sum = df_sum.rename(definition_dict, axis='columns')\n", + " df_sum.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_sum = df_sum.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " # display(df_sum)\n" + ] + }, + { + "cell_type": "code", + "execution_count": 379, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "Overall 21% of the latest `5 group` ethnicity matched the most frequent `5 group` ethnicity for all codelists. 20% of those with the most recent ethnicity classified as `White` also had the most frequent ethnicity `White` for all three codelists. `Mixed` was the least concordant for all three codelists with nan% (SNOMED:2022 and CTV:2020) and nan% (PRIMIS:2021) of those with the most recent ethnicity `Mixed` also had the most frequent ethnicity `Mixed`. Of those with latest ethnicity `Black` nan% also had the most frequent ethnicity `White`.\n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"\"\"\n", + "Overall {'{:,.0f}'.format(df_col_ethnicity_5[0])}% of the latest `5 group` ethnicity matched the most frequent `5 group` ethnicity for all codelists. {'{:,.0f}'.format(df_sum_pct_ethnicity_new_5[\"white_pct\"][3])}% of those with the most recent ethnicity classified as `White` also had the most frequent ethnicity `White` for all three codelists. `Mixed` was the least concordant for all three codelists with {'{:,.0f}'.format(df_sum_pct_ethnicity_new_5[\"mixed_pct\"][2])}% (SNOMED:2022 and CTV:2020) and {'{:,.0f}'.format(df_sum_pct_ethnicity_primis_5[\"mixed_pct\"][2])}% (PRIMIS:2021) of those with the most recent ethnicity `Mixed` also had the most frequent ethnicity `Mixed`. Of those with latest ethnicity `Black` {'{:,.0f}'.format(df_sum_pct_ethnicity_new_5[\"white_pct\"][1])}% also had the most frequent ethnicity `White`.\n", + "\"\"\"))" + ] + }, + { + "cell_type": "code", + "execution_count": 380, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "##### 'Latest' and 'Most Frequent' 5 SNOMED:2022 ethnicity" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/html": [ + "
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Latest Ethnicity-\n", + "5 SNOMED:2022
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asianblackmixedwhiteother
Latest Ethnicity-\n", + "5 CTV3:2020
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White- (-)- (-)10 (33.3)10 (33.3)10 (33.3)
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" + ], + "text/plain": [ + " asian black mixed \\\n", + "Latest Ethnicity-\\n5 PRIMIS:2021 \n", + "Asian 10 (50.0) 10 (50.0) - (-) \n", + "Black 15 (33.3) - (-) 10 (22.2) \n", + "Mixed 10 (100.0) - (-) - (-) \n", + "White - (-) - (-) - (-) \n", + "Other 10 (20.0) 10 (20.0) 10 (20.0) \n", + "\n", + " white other \n", + "Latest Ethnicity-\\n5 PRIMIS:2021 \n", + "Asian - (-) - (-) \n", + "Black 10 (22.2) 10 (22.2) \n", + "Mixed - (-) - (-) \n", + "White 10 (100.0) - (-) \n", + "Other 10 (20.0) 10 (20.0) " + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + " \n", + "\n" + ] + } + ], + "source": [ + "for definition in definitions_5:\n", + " df_sum = pd.read_csv(f'../output/{output_path_5}/simple_latest_common_{definition}{suffix}_registered.csv').set_index(definition)\n", + " # sort rows by category index\n", + " df_sum.columns = df_sum.columns.str.replace(definition + \"_\", \"\")\n", + " df_sum.columns = df_sum.columns.str.lower()\n", + " df_sum = df_sum.reindex(list(code_dict_5[definition].values()))\n", + " df_sum = df_sum[lowerlist_5]\n", + " df_counts = pd.DataFrame(\n", + " np.diagonal(df_sum),\n", + " index=df_sum.index,\n", + " # columns=[f\"matching (n={np.diagonal(df_sum).sum()})\"],\n", + " )\n", + " df_sum2 = df_sum.copy(deep=True)\n", + " np.fill_diagonal(df_sum2.values, 0)\n", + " df_diag = pd.DataFrame(\n", + " df_sum2.sum(axis=1),\n", + " )\n", + " df_out = df_counts.merge(df_diag, right_index=True, left_index=True)\n", + " columns=round(df_out.sum()/df_out.sum(axis=1).sum()*100,1)\n", + " globals()[f'df_col_{definition}'] = columns\n", + " df_out.columns=[f\"matching ({columns[0]}%)\",f\"not matching ({columns[1]}%)\"]\n", + " df_out = df_out.reset_index()\n", + " df_out = df_out.rename(definition_dict, axis='columns')\n", + " df_out.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_out = df_out.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_out = df_out.replace(np.nan, \"-\")\n", + " display(Markdown(f\"##### 'Latest' and 'Most Frequent' {definition_dict[definition]} ethnicity\"))\n", + " display(df_out)\n", + " print(\" \\n\")\n", + " \n", + " if code_dict_5 != \"\":\n", + " lowerlist_5 = [x.lower() for x in (list(code_dict_5[definition].values()))]\n", + " df_sum = df_sum[lowerlist_5]\n", + " else:\n", + " df_sum = df_sum.reindex(sorted(df_sum.columns), axis=1)\n", + "\n", + " # Combine count and percentage columns\n", + " df_sum[\"population\"]=df_sum.sum(axis = 1)\n", + " globals()[f'df_sum_pct_{definition}'] = df_sum\n", + " for item in lowerlist_5:\n", + " df_sum[item + \"_pct\"]= round(\n", + " (df_sum[item].div(df_sum[\"population\"])) * 100, 1\n", + " )\n", + " df_sum[item] = (\n", + " df_sum[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_sum[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_sum = df_sum[lowerlist_5]\n", + " df_sum = df_sum.reset_index()\n", + " df_sum = df_sum.replace(\"nan (nan)\", \"- (-)\")\n", + " df_sum = df_sum.rename(definition_dict, axis='columns')\n", + " df_sum.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_sum = df_sum.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " display(Markdown(f\"### 'Latest' and 'Most Frequent' {definition_dict[definition]} ethnicity expanded\"))\n", + " display(df_sum)\n", + " print(\" \\n\")\n" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "#### 16 group" + ] + }, + { + "cell_type": "code", + "execution_count": 381, + "metadata": {}, + "outputs": [], + "source": [ + "for definition in definitions_16:\n", + " df_sum = pd.read_csv(f'../output/{output_path_16}/simple_latest_common_{definition}{suffix}_registered.csv').set_index(definition) \n", + " # sort rows by category index\n", + " df_sum.columns = df_sum.columns.str.replace(definition + \"_\", \"\")\n", + " df_sum.columns = df_sum.columns.str.lower()\n", + " df_sum = df_sum.reindex(list(code_dict_16[definition].values()))\n", + " df_sum = df_sum[lowerlist_16]\n", + " df_counts = pd.DataFrame(\n", + " np.diagonal(df_sum),\n", + " index=df_sum.index,\n", + " # columns=[f\"matching (n={np.diagonal(df_sum).sum()})\"],\n", + " )\n", + "\n", + " df_sum2 = df_sum.copy(deep=True)\n", + " np.fill_diagonal(df_sum2.values, 0)\n", + " df_diag = pd.DataFrame(\n", + " df_sum2.sum(axis=1),\n", + " )\n", + " df_out = df_counts.merge(df_diag, right_index=True, left_index=True)\n", + " columns=round(df_out.sum()/df_out.sum(axis=1).sum()*100,1)\n", + " globals()[f'df_col_{definition}'] = columns\n", + " df_out.columns=[f\"matching ({columns[0]}%)\",f\"not matching ({columns[1]}%)\"]\n", + " df_out = df_out.reset_index()\n", + " df_out = df_out.rename(definition_dict, axis='columns')\n", + " df_out.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_out = df_out.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_out = df_out.replace(np.nan, \"-\")\n", + " # display(df_out)\n", + " \n", + " if code_dict_16 != \"\":\n", + " lowerlist_16 = [x.lower() for x in (list(code_dict_16[definition].values()))]\n", + " df_sum = df_sum[lowerlist_16]\n", + " else:\n", + " df_sum = df_sum.reindex(sorted(df_sum.columns), axis=1)\n", + "\n", + " # Combine count and percentage columns\n", + " df_sum[\"population\"]=df_sum.sum(axis = 1)\n", + " globals()[f'df_sum_pct_{definition}'] = df_sum\n", + " for item in lowerlist_16:\n", + " df_sum[item + \"_pct\"]= round(\n", + " (df_sum[item].div(df_sum[\"population\"])) * 100, 1\n", + " )\n", + " \n", + " df_sum[item] = (\n", + " df_sum[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_sum[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_sum = df_sum[lowerlist_16]\n", + " df_sum = df_sum.reset_index()\n", + " df_sum = df_sum.replace(\"nan (nan)\", \"- (-)\")\n", + " df_sum = df_sum.rename(definition_dict, axis='columns')\n", + " df_sum.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_sum = df_sum.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_sum.columns = df_sum.columns.str.replace(\"_\", \" \")\n", + " \n", + " \n", + " # display(df_sum)\n" + ] + }, + { + "cell_type": "code", + "execution_count": 382, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "Expanding to the `16 group` the percentage of latest ethnicity that match the most frequent ethnicity falls to nan% for both SNOMED:2022 and CTV3:2020 and nan% for PRIMIS:2021. `White British` was the most concordant for both SNOMED:2022 and CTV3:2020 with nan% and nan%, respectively, of those with the most recent ethnicity classified as `White British` also had the most frequent ethnicity `White British`. For both SNOMED:2022 and CTV3:2020 `Other Black` was the least concordant, nan% of those with the most recent ethnicity `Other Black` also had the most frequent ethnicity `Other Black`.\n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"\"\"\n", + "Expanding to the `16 group` the percentage of latest ethnicity that match the most frequent ethnicity falls to {'{:,.0f}'.format(df_col_ethnicity_new_16[0])}% for both SNOMED:2022 and CTV3:2020 and {'{:,.0f}'.format(df_col_ethnicity_primis_16[0])}% for PRIMIS:2021. `White British` was the most concordant for both SNOMED:2022 and CTV3:2020 with {'{:,.0f}'.format(df_sum_pct_ethnicity_new_16[\"white_british_pct\"][11])}% and {'{:,.0f}'.format(df_sum_pct_ethnicity_16[\"white_british_pct\"][11])}%, respectively, of those with the most recent ethnicity classified as `White British` also had the most frequent ethnicity `White British`. For both SNOMED:2022 and CTV3:2020 `Other Black` was the least concordant, {'{:,.0f}'.format(df_sum_pct_ethnicity_new_16[\"other_black_pct\"][6])}% of those with the most recent ethnicity `Other Black` also had the most frequent ethnicity `Other Black`.\n", + "\"\"\"))" + ] + }, + { + "cell_type": "code", + "execution_count": 383, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "##### 'Latest' and 'Most Frequent' 16 SNOMED:2022 ethnicity" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/html": [ + "
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Indian- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Pakistani- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Bangladeshi- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Other_Asian- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Caribbean- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
African- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Other_Black- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
White_and_Black_Caribbean- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
White_and_Black_African- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
White_and_Asian- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Other_Mixed- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
White_British- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
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White_and_Black_African-0
White_and_Asian-0
Other_Mixed-0
White_British-0
White_Irish-0
Other_White-0
Chinese-0
Any_other_ethnic_group-0
\n", + "
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indianpakistanibangladeshiother asiancaribbeanafricanother blackwhite and black caribbeanwhite and black africanwhite and asianother mixedwhite britishwhite irishother whitechineseany other ethnic group
Latest Ethnicity-\n", + "16 PRIMIS:2021
Indian- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Pakistani- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Bangladeshi- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Other_Asian- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Caribbean- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
African- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Other_Black- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
White_and_Black_Caribbean- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
White_and_Black_African- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
White_and_Asian- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Other_Mixed- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
White_British- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
White_Irish- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Other_White- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Chinese- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
Any_other_ethnic_group- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)- (-)
\n", + "
" + ], + "text/plain": [ + " indian pakistani bangladeshi other asian \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian - (-) - (-) - (-) - (-) \n", + "Pakistani - (-) - (-) - (-) - (-) \n", + "Bangladeshi - (-) - (-) - (-) - (-) \n", + "Other_Asian - (-) - (-) - (-) - (-) \n", + "Caribbean - (-) - (-) - (-) - (-) \n", + "African - (-) - (-) - (-) - (-) \n", + "Other_Black - (-) - (-) - (-) - (-) \n", + "White_and_Black_Caribbean - (-) - (-) - (-) - (-) \n", + "White_and_Black_African - (-) - (-) - (-) - (-) \n", + "White_and_Asian - (-) - (-) - (-) - (-) \n", + "Other_Mixed - (-) - (-) - (-) - (-) \n", + "White_British - (-) - (-) - (-) - (-) \n", + "White_Irish - (-) - (-) - (-) - (-) \n", + "Other_White - (-) - (-) - (-) - (-) \n", + "Chinese - (-) - (-) - (-) - (-) \n", + "Any_other_ethnic_group - (-) - (-) - (-) - (-) \n", + "\n", + " caribbean african other black \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian - (-) - (-) - (-) \n", + "Pakistani - (-) - (-) - (-) \n", + "Bangladeshi - (-) - (-) - (-) \n", + "Other_Asian - (-) - (-) - (-) \n", + "Caribbean - (-) - (-) - (-) \n", + "African - (-) - (-) - (-) \n", + "Other_Black - (-) - (-) - (-) \n", + "White_and_Black_Caribbean - (-) - (-) - (-) \n", + "White_and_Black_African - (-) - (-) - (-) \n", + "White_and_Asian - (-) - (-) - (-) \n", + "Other_Mixed - (-) - (-) - (-) \n", + "White_British - (-) - (-) - (-) \n", + "White_Irish - (-) - (-) - (-) \n", + "Other_White - (-) - (-) - (-) \n", + "Chinese - (-) - (-) - (-) \n", + "Any_other_ethnic_group - (-) - (-) - (-) \n", + "\n", + " white and black caribbean \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian - (-) \n", + "Pakistani - (-) \n", + "Bangladeshi - (-) \n", + "Other_Asian - (-) \n", + "Caribbean - (-) \n", + "African - (-) \n", + "Other_Black - (-) \n", + "White_and_Black_Caribbean - (-) \n", + "White_and_Black_African - (-) \n", + "White_and_Asian - (-) \n", + "Other_Mixed - (-) \n", + "White_British - (-) \n", + "White_Irish - (-) \n", + "Other_White - (-) \n", + "Chinese - (-) \n", + "Any_other_ethnic_group - (-) \n", + "\n", + " white and black african white and asian \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian - (-) - (-) \n", + "Pakistani - (-) - (-) \n", + "Bangladeshi - (-) - (-) \n", + "Other_Asian - (-) - (-) \n", + "Caribbean - (-) - (-) \n", + "African - (-) - (-) \n", + "Other_Black - (-) - (-) \n", + "White_and_Black_Caribbean - (-) - (-) \n", + "White_and_Black_African - (-) - (-) \n", + "White_and_Asian - (-) - (-) \n", + "Other_Mixed - (-) - (-) \n", + "White_British - (-) - (-) \n", + "White_Irish - (-) - (-) \n", + "Other_White - (-) - (-) \n", + "Chinese - (-) - (-) \n", + "Any_other_ethnic_group - (-) - (-) \n", + "\n", + " other mixed white british white irish \\\n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian - (-) - (-) - (-) \n", + "Pakistani - (-) - (-) - (-) \n", + "Bangladeshi - (-) - (-) - (-) \n", + "Other_Asian - (-) - (-) - (-) \n", + "Caribbean - (-) - (-) - (-) \n", + "African - (-) - (-) - (-) \n", + "Other_Black - (-) - (-) - (-) \n", + "White_and_Black_Caribbean - (-) - (-) - (-) \n", + "White_and_Black_African - (-) - (-) - (-) \n", + "White_and_Asian - (-) - (-) - (-) \n", + "Other_Mixed - (-) - (-) - (-) \n", + "White_British - (-) - (-) - (-) \n", + "White_Irish - (-) - (-) - (-) \n", + "Other_White - (-) - (-) - (-) \n", + "Chinese - (-) - (-) - (-) \n", + "Any_other_ethnic_group - (-) - (-) - (-) \n", + "\n", + " other white chinese any other ethnic group \n", + "Latest Ethnicity-\\n16 PRIMIS:2021 \n", + "Indian - (-) - (-) - (-) \n", + "Pakistani - (-) - (-) - (-) \n", + "Bangladeshi - (-) - (-) - (-) \n", + "Other_Asian - (-) - (-) - (-) \n", + "Caribbean - (-) - (-) - (-) \n", + "African - (-) - (-) - (-) \n", + "Other_Black - (-) - (-) - (-) \n", + "White_and_Black_Caribbean - (-) - (-) - (-) \n", + "White_and_Black_African - (-) - (-) - (-) \n", + "White_and_Asian - (-) - (-) - (-) \n", + "Other_Mixed - (-) - (-) - (-) \n", + "White_British - (-) - (-) - (-) \n", + "White_Irish - (-) - (-) - (-) \n", + "Other_White - (-) - (-) - (-) \n", + "Chinese - (-) - (-) - (-) \n", + "Any_other_ethnic_group - (-) - (-) - (-) " + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "name": "stdout", + "output_type": "stream", + "text": [ + " \n", + "\n" + ] + } + ], + "source": [ + "for definition in definitions_16:\n", + " df_sum = pd.read_csv(f'../output/{output_path_16}/simple_latest_common_{definition}{suffix}_registered.csv').set_index(definition) \n", + " # sort rows by category index\n", + " df_sum.columns = df_sum.columns.str.replace(definition + \"_\", \"\")\n", + " df_sum.columns = df_sum.columns.str.lower()\n", + " df_sum = df_sum.reindex(list(code_dict_16[definition].values()))\n", + " df_sum = df_sum[lowerlist_16]\n", + " df_counts = pd.DataFrame(\n", + " np.diagonal(df_sum),\n", + " index=df_sum.index,\n", + " # columns=[f\"matching (n={np.diagonal(df_sum).sum()})\"],\n", + " )\n", + "\n", + " df_sum2 = df_sum.copy(deep=True)\n", + " np.fill_diagonal(df_sum2.values, 0)\n", + " df_diag = pd.DataFrame(\n", + " df_sum2.sum(axis=1),\n", + " )\n", + " df_out = df_counts.merge(df_diag, right_index=True, left_index=True)\n", + " columns=round(df_out.sum()/df_out.sum(axis=1).sum()*100,1)\n", + " globals()[f'df_col_{definition}'] = columns\n", + " df_out.columns=[f\"matching ({columns[0]}%)\",f\"not matching ({columns[1]}%)\"]\n", + " df_out = df_out.reset_index()\n", + " df_out = df_out.rename(definition_dict, axis='columns')\n", + " df_out.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_out = df_out.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_out = df_out.replace(np.nan, \"-\")\n", + "\n", + " display(Markdown(f\"##### 'Latest' and 'Most Frequent' {definition_dict[definition]} ethnicity\"))\n", + " display(df_out)\n", + " print(\" \\n\")\n", + "\n", + " if code_dict_16 != \"\":\n", + " lowerlist_16 = [x.lower() for x in (list(code_dict_16[definition].values()))]\n", + " df_sum = df_sum[lowerlist_16]\n", + " else:\n", + " df_sum = df_sum.reindex(sorted(df_sum.columns), axis=1)\n", + "\n", + " # Combine count and percentage columns\n", + " df_sum[\"population\"]=df_sum.sum(axis = 1)\n", + " globals()[f'df_sum_pct_{definition}'] = df_sum\n", + " for item in lowerlist_16:\n", + " df_sum[item + \"_pct\"]= round(\n", + " (df_sum[item].div(df_sum[\"population\"])) * 100, 1\n", + " )\n", + " \n", + " df_sum[item] = (\n", + " df_sum[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_sum[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_sum = df_sum[lowerlist_16]\n", + " df_sum = df_sum.reset_index()\n", + " df_sum = df_sum.replace(\"nan (nan)\", \"- (-)\")\n", + " df_sum = df_sum.rename(definition_dict, axis='columns')\n", + " df_sum.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_sum = df_sum.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_sum.columns = df_sum.columns.str.replace(\"_\", \" \")\n", + " \n", + " display(Markdown(f\"### 'Latest' and 'Most Frequent' {definition_dict[definition]} ethnicity expanded\"))\n", + " display(df_sum)\n", + " print(\" \\n\")" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "### Discussion" + ] + }, + { + "cell_type": "code", + "execution_count": 384, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "This study has shown that primary care ethnicity data made available via OpenSAFELY is complete for around three quarters of all patients. However, recording ethnicity is not straightforward. Indeed, despite often being used as a key variable to describe health, the idea of \"ethnicity\" has been disputed. Self-identified ethnicity is not a fixed concept and evolving socio-cultural trends could contribute to changes in a person's self-identified ethnic group, particularly for those with mixed heritage. It is therefore perhaps not surprising to see lower levels of concordance between latest ethnicity and most common ethnicity in those with latest ethnicity grouped as `mixed`. \n", + "\n", + "In OpenSAFELY ethnicity in primary care was originally grouped using the CTV3:2020 codelist. However, this codelist does not strictly follow the grouping of the 2001 Census, which is the NHS standard for ethnicity. The common practice of supplementing CTV3:2020 coded ethnicity with SUS data has been shown to provide ethnicity data for [90.6% of patients](https://wellcomeopenresearch.org/articles/7-191/v1), however could lead to inconsistent classification as SUS data follow the 2001 census groups. \n", + "\n", + "We believe that the SNOMED:2022 codelist provides a more consistent representation of ethnicity as defined by the 2001 census groups and should be the preferred codelist for primary care ethnicity. \n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"\"\"\n", + "This study has shown that primary care ethnicity data made available via OpenSAFELY is complete for around three quarters of all patients. However, recording ethnicity is not straightforward. Indeed, despite often being used as a key variable to describe health, the idea of \"ethnicity\" has been disputed. Self-identified ethnicity is not a fixed concept and evolving socio-cultural trends could contribute to changes in a person's self-identified ethnic group, particularly for those with mixed heritage. It is therefore perhaps not surprising to see lower levels of concordance between latest ethnicity and most common ethnicity in those with latest ethnicity grouped as `mixed`. \n", + "\n", + "In OpenSAFELY ethnicity in primary care was originally grouped using the CTV3:2020 codelist. However, this codelist does not strictly follow the grouping of the 2001 Census, which is the NHS standard for ethnicity. The common practice of supplementing CTV3:2020 coded ethnicity with SUS data has been shown to provide ethnicity data for [90.6% of patients](https://wellcomeopenresearch.org/articles/7-191/v1), however could lead to inconsistent classification as SUS data follow the 2001 census groups. \n", + "\n", + "We believe that the SNOMED:2022 codelist provides a more consistent representation of ethnicity as defined by the 2001 census groups and should be the preferred codelist for primary care ethnicity. \n", + "\"\"\"))" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "### Limitations" + ] + }, + { + "cell_type": "code", + "execution_count": 385, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "It is common for OpenSAFELY studies to supplement the primary care recorded ethnicity, where missing, with ethnicity data from the Secondary Uses Service (SUS). This study has focussed solely on the primary care recorded ethnicity. Due to the way that non-native data, such as GP2GP data and historical data, are imported into TPP the date of ethnicity recorded is not always available therefore chronology is unreliable for ethnicity data. \n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"\"\"\n", + "It is common for OpenSAFELY studies to supplement the primary care recorded ethnicity, where missing, with ethnicity data from the Secondary Uses Service (SUS). This study has focussed solely on the primary care recorded ethnicity. Due to the way that non-native data, such as GP2GP data and historical data, are imported into TPP the date of ethnicity recorded is not always available therefore chronology is unreliable for ethnicity data. \n", + "\"\"\"))" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "### Conclusion" + ] + }, + { + "cell_type": "code", + "execution_count": 386, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "This report describes existing methods to derive primary care ethnicity in OpenSAFELY-TPP and suggests the adoption of the SNOMED:2022 codelist as the new standard method. It is a living document that can be periodically re-run to evaluate the most current best practices for research. If you have improvements or forks, please contact the OpenSAFELY data team.\n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "display(Markdown(f\"\"\"\n", + "This report describes existing methods to derive primary care ethnicity in OpenSAFELY-TPP and suggests the adoption of the SNOMED:2022 codelist as the new standard method. It is a living document that can be periodically re-run to evaluate the most current best practices for research. If you have improvements or forks, please contact the OpenSAFELY data team.\n", + "\"\"\"))" + ] + }, + { + "cell_type": "code", + "execution_count": 387, + "metadata": {}, + "outputs": [ + { + "data": { + "text/markdown": [ + "\n", + "## Technical details\n", + "\n", + "This notebook was run on 2023-02-16. The information below is based on data extracted from the OpenSAFELY-TPP database on 2023-02-15.\n", + "\n", + "If a clinical code appears in the primary care record on multiple dates, the latest date is used. \n", + "\n", + "\n", + "Only patients registered at their practice on January 1 2022 are included.\n", + "\n" + ], + "text/plain": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "from datetime import date, timedelta\n", + "# get data extraction date\n", + "extract_date = pd.to_datetime(os.path.getmtime(f\"../output/{output_path_16}/simple_patient_counts_registered.csv\"), unit='s')\n", + "# get notebook run date\n", + "run_date = date.today()\n", + "\n", + "display(Markdown(f\"\"\"\n", + "## Technical details\n", + "\n", + "This notebook was run on {run_date.strftime('%Y-%m-%d')}. The information below is based on data extracted from the OpenSAFELY-TPP database on {extract_date.strftime('%Y-%m-%d')}.\n", + "\n", + "If a clinical code appears in the primary care record on multiple dates, the latest date is used. \n", + "\n", + "\n", + "Only patients registered at their practice on January 1 2022 are included.\n", + "\n", + "\"\"\"))" + ] + } + ], + "metadata": { + "interpreter": { + "hash": "bd7deed66f04c8f1cb07fbe5b34625baefe8e7d41af3b53c9662fc8ba397df1b" + }, + "kernelspec": { + "display_name": "Python 3.9.7 ('base')", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.9.7" + } + }, + "nbformat": 4, + "nbformat_minor": 4 +} diff --git a/notebooks_jupyter/local_runs.ipynb b/notebooks_jupyter/local_runs.ipynb new file mode 100644 index 0000000..0fb127c --- /dev/null +++ b/notebooks_jupyter/local_runs.ipynb @@ -0,0 +1,523 @@ +{ + "cells": [ + { + "cell_type": "code", + "execution_count": 1, + "metadata": {}, + "outputs": [], + "source": [ + "import pandas as pd\n", + "from itertools import product\n", + "import numpy as np\n", + "\n", + "def local_patient_counts(\n", + " definitions, group, input_path, output_path, code_dict=\"\",definition_dict=\"\", categories=False, missing=False\n", + "):\n", + " suffix = \"_filled\"\n", + " overlap = \"all_filled\"\n", + " if missing == True:\n", + " suffix = \"_missing\"\n", + " overlap = \"all_missing\"\n", + " if categories:\n", + " # df_population = pd.read_csv(\n", + " # f\"output/{input_path}/simple_patient_counts_registered.csv\"\n", + " # ).set_index([\"group\", \"subgroup\"])\n", + " \n", + "\n", + " df_append = pd.read_csv(\n", + " f\"../output/{input_path}/simple_patient_counts_categories_{group}_group_registered.csv\"\n", + " ).set_index([\"group\", \"subgroup\"])\n", + " for col in df_append.columns[df_append.columns.str.endswith('supplemented')]:\n", + " df_append=df_append.rename(columns={col: f\"{col}_filled\"})\n", + " \n", + " # df_append.drop(\"population\", inplace=True, axis=1)\n", + " for definition in definitions:\n", + " \n", + " # df_append[f\"population_{definition}\"] = df_population[definition+\"_filled\"]\n", + " # ensure definitions[n] in code_dict[definitions[n]] below refers to one of the definitions of interest\n", + " full_definitions = [\n", + " f\"{category}_{definition}\"\n", + " for category, definition in product(\n", + " code_dict[definitions[1]].values(), [definition]\n", + " )\n", + " ]\n", + " for full_definition in full_definitions:\n", + " if missing:\n", + " df_append[full_definition + suffix] = (\n", + " df_append[f\"population_{definition}\"] - df_append[full_definition + \"_filled\"]\n", + " ) \n", + " df_append[full_definition + \"_pct\"] = round(\n", + " (df_append[full_definition + suffix].div(df_append[f\"population\"])) * 100, 1\n", + " )\n", + " \n", + " df_append[overlap + \"_pct\"] = round(\n", + " (df_append[overlap].div(df_append[f\"population\"])) * 100, 1\n", + " )\n", + " # df_append[full_definition + \"_pct\"] = round(\n", + " # (df_append[full_definition + suffix].div(df_append[f\"population_{definition}\"])) * 100, 1\n", + " # )\n", + " # df_append[overlap + \"_pct\"] = round(\n", + " # (df_append[overlap].div(df_append[f\"population_{definition}\"])) * 100, 1\n", + " # )\n", + " # Combine count and percentage columns\n", + " df_append[full_definition] = (\n", + " df_append[full_definition + suffix].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_append[full_definition + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_append = df_append.drop(columns=[full_definition + suffix, full_definition + \"_pct\"])\n", + " else:\n", + " df_append = pd.read_csv(\n", + " f\"../output/{input_path}/simple_patient_counts_{group}_sus_registered.csv\"\n", + " ).set_index([\"group\", \"subgroup\"])\n", + " for definition in definitions:\n", + " if missing:\n", + " df_append[definition + suffix] = (\n", + " df_append[\"population\"] - df_append[definition + \"_filled\"]\n", + " ) \n", + " df_append[definition + \"_pct\"] = round(\n", + " (df_append[definition + suffix].div(df_append[\"population\"])) * 100, 1\n", + " )\n", + " df_append[overlap + \"_pct\"] = round(\n", + " (df_append[overlap].div(df_append[\"population\"])) * 100, 1\n", + " )\n", + " \n", + " for definition in definitions: \n", + " # Percentage increase from adding SUS data\n", + " df_append[definition + \"_pp_inc\"] =round( df_append[definitions[1] + \"_pct\"] - df_append[definition + \"_pct\"],1)\n", + " # Combine count and percentage columns\n", + " df_append[definition] = (\n", + " df_append[definition + suffix].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_append[definition + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_append = df_append.drop(columns=[definition + suffix, definition + \"_pct\"])\n", + " df_append[overlap] = (\n", + " df_append[overlap].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_append[overlap + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_append = df_append.reset_index()\n", + " df_append = df_append.replace(\"True\", \"Yes\")\n", + " df_append = df_append.replace(\"False\", \"No\")\n", + " df_append = df_append.set_index([\"group\", \"subgroup\"])\n", + " df_append = df_append.drop(columns=[overlap + \"_pct\"])\n", + " if categories:\n", + " full_definitions = [\n", + " f\"{category}_{definition}\"\n", + " for category, definition in product(\n", + " code_dict[definitions[1]].values(), definitions\n", + " )\n", + " ]\n", + " df_patient_counts = df_append[full_definitions]\n", + " else: \n", + " df_patient_counts = df_append[definitions + [overlap] + [\"population\"]+[definitions[0] + \"_pp_inc\"]]\n", + " # Final redaction step\n", + " df_patient_counts = df_patient_counts.replace(np.nan, \"-\")\n", + " df_patient_counts = df_patient_counts.replace(\"nan (nan)\", \"- (-)\")\n", + "\n", + " for k, v in definition_dict.items():\n", + " df_patient_counts.columns = df_patient_counts.columns.str.replace(k,v) \n", + " df_patient_counts.columns = df_patient_counts.columns.str.replace(\"_\", \" \")\n", + " \n", + " if categories:\n", + " df_patient_counts.to_csv(\n", + " f\"../output/{output_path}/local_patient_counts_categories_{group}_registered.csv\"\n", + " )\n", + " display(f\"saved: ../output/{output_path}/local_patient_counts_categories_{group}_registered.csv\")\n", + " else:\n", + " df_patient_counts.to_csv(\n", + " f\"../output/{output_path}/local_patient_counts_registered.csv\"\n", + " )\n", + " display(f\"saved: ../output/{output_path}/local_patient_counts_registered.csv\")\n", + "\n", + "########################################################\n", + "########################################################\n", + "def local_state_change(\n", + " definitions, input_path,output_path, code_dict=\"\", definition_dict=\"\",\n", + "):\n", + " for definition in definitions:\n", + " lowerlist_5 = [x.lower() for x in (list(code_dict[definition].values()))]\n", + " df_state_change = pd.read_csv(f'../output/{input_path}/simple_state_change_{definition}_registered.csv').set_index(definition)\n", + " df_state_change.columns = df_state_change.columns.str.replace(definition + \"_\", \"\")\n", + " #resort rows\n", + " df_state_change = df_state_change.reindex(list(code_dict[definition].values()))\n", + " df_state_change = df_state_change.reset_index()\n", + " \n", + " df_state_change[definition]=df_state_change[definition]+\": \" +df_state_change[\"n\"].apply(lambda x: \"{:,.0f}\".format(x))\n", + " df_state_change = df_state_change.set_index(definition)\n", + "\n", + " for item in lowerlist_5 + list([\"any\"]):\n", + " df_state_change[item + \"_pct\"]= round(\n", + " (df_state_change[item].div(df_state_change[\"n\"])) * 100, 1\n", + " )\n", + " \n", + " df_state_change[item] = (\n", + " df_state_change[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_state_change[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_state_change=df_state_change[lowerlist_5 + list([\"any\"])]\n", + " df_state_change = df_state_change.replace(\"nan (nan)\", \"- (-)\")\n", + " df_state_change = df_state_change.reset_index()\n", + " df_state_change = df_state_change.rename(definition_dict, axis='columns')\n", + " df_state_change.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_state_change = df_state_change.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_state_change.to_csv(\n", + " f\"../output/{output_path}/local_state_change_{definition}_registered.csv\"\n", + " )\n", + " display(f\"saved: ../output/{output_path}/local_state_change_{definition}_registered.csv\")\n", + "\n", + "\n", + "def local_latest_common(definitions, input_path,output_path, code_dict=\"\", definition_dict=\"\",suffix=\"\",\n", + "):\n", + " for definition in definitions:\n", + " if code_dict != \"\":\n", + " lowerlist_5 = [x.lower() for x in (list(code_dict[definition].values()))]\n", + " df_sum = pd.read_csv(f'../output/{input_path}/simple_latest_common_{definition}{suffix}_registered.csv').set_index(definition)\n", + " # sort rows by category index\n", + " df_sum.columns = df_sum.columns.str.replace(definition + \"_\", \"\")\n", + " df_sum.columns = df_sum.columns.str.lower()\n", + " df_sum = df_sum.reindex(list(code_dict[definition].values()))\n", + " df_sum = df_sum[lowerlist_5]\n", + " df_counts = pd.DataFrame(\n", + " np.diagonal(df_sum),\n", + " index=df_sum.index,\n", + " # columns=[f\"matching (n={np.diagonal(df_sum).sum()})\"],\n", + " )\n", + "\n", + " df_sum2 = df_sum.copy(deep=True)\n", + " np.fill_diagonal(df_sum2.values, 0)\n", + " df_diag = pd.DataFrame(\n", + " df_sum2.sum(axis=1),\n", + " )\n", + " df_out = df_counts.merge(df_diag, right_index=True, left_index=True)\n", + " # columns=round(df_out.sum()/df_out.sum(axis=1).sum()*100,1)\n", + "\n", + " df_out.loc['Total']= df_out.sum()\n", + " df_out.columns=[f\"matching\",f\"not matching\"]\n", + " df_out[\"matching_pct\"] = round(df_out[\"matching\"]/(df_out[[\"matching\",\"not matching\"]].sum(axis=1))*100,1)\n", + " df_out[\"not matching_pct\"] = round(df_out[\"not matching\"]/(df_out[[\"matching\",\"not matching\"]].sum(axis=1))*100,1)\n", + " for item in[\"matching\",\"not matching\"]:\n", + " df_out[item] = (\n", + " df_out[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_out[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_out = df_out[[\"matching\",\"not matching\"]]\n", + " df_out = df_out.reset_index()\n", + " df_out = df_out.rename(definition_dict, axis='columns')\n", + " df_out.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_out = df_out.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_out = df_out.replace(np.nan, \"-\")\n", + " df_out.to_csv(\n", + " f\"../output/{output_path}/local_latest_common_{definition}_registered.csv\"\n", + " )\n", + " display(f\"saved: ../output/{output_path}/local_latest_common_{definition}_registered.csv\")\n", + " \n", + " if code_dict != \"\":\n", + " lowerlist_5 = [x.lower() for x in (list(code_dict[definition].values()))]\n", + " df_sum = df_sum[lowerlist_5]\n", + " else:\n", + " df_sum = df_sum.reindex(sorted(df_sum.columns), axis=1)\n", + "\n", + " # Combine count and percentage columns\n", + " df_sum[\"population\"]=df_sum.sum(axis = 1)\n", + " for item in lowerlist_5:\n", + " df_sum[item + \"_pct\"]= round(\n", + " (df_sum[item].div(df_sum[\"population\"])) * 100, 1\n", + " )\n", + " df_sum[item] = (\n", + " df_sum[item].apply(lambda x: \"{:,.0f}\".format(x))\n", + " + \" (\"\n", + " + df_sum[item + \"_pct\"].astype(str)\n", + " + \")\"\n", + " )\n", + " df_sum = df_sum[lowerlist_5]\n", + " df_sum = df_sum.reset_index()\n", + " df_sum = df_sum.replace(\"nan (nan)\", \"- (-)\")\n", + " df_sum = df_sum.rename(definition_dict, axis='columns')\n", + " df_sum.rename(columns={f'{definition_dict[definition]}':f'Latest Ethnicity-\\n{definition_dict[definition]}'}, inplace=True)\n", + " df_sum = df_sum.set_index(f'Latest Ethnicity-\\n{definition_dict[definition]}')\n", + " df_sum.to_csv(\n", + " f\"../output/{output_path}/local_latest_common_{definition}_expanded_registered.csv\"\n", + " )\n", + " display(f\"saved: ../output/{output_path}/local_latest_common_{definition}_expanded_registered.csv\")\n", + "\n" + ] + }, + { + "cell_type": "code", + "execution_count": 2, + "metadata": {}, + "outputs": [ + { + "data": { + "text/plain": [ + "'saved: ../output/released/made_locally/local_patient_counts_registered.csv'" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/plain": [ + "'saved: ../output/released/made_locally/local_patient_counts_categories_5_registered.csv'" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/plain": [ + "'saved: ../output/released/made_locally/local_patient_counts_categories_16_registered.csv'" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/plain": [ + "'saved: ../output/released/made_locally/local_latest_common_ethnicity_new_5_registered.csv'" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/plain": [ + "'saved: ../output/released/made_locally/local_latest_common_ethnicity_new_5_expanded_registered.csv'" + ] + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/plain": [ + "'saved: ../output/released/made_locally/local_state_change_ethnicity_new_5_registered.csv'" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "import os\n", + "import pandas as pd\n", + "from itertools import product\n", + "import numpy as np\n", + "\n", + "\n", + "### CONFIGURE ###\n", + "definitions_5 = ['ethnicity_new_5', 'ethnicity_5', 'ethnicity_primis_5']\n", + "# definitions_16 = ['ethnicity_new_16', 'ethnicity_16', 'ethnicity_primis_16']\n", + "definitions_sus_5 = ['ethnicity_new_5','any']\n", + "definitions_sus_16 = ['ethnicity_new_16','any']\n", + "definitions_supplemented_5 = ['ethnicity_new_5','supplemented']\n", + "definitions_supplemented_16 = ['ethnicity_new_16','supplemented']\n", + "covariates = ['_age_band','_sex','_region','_imd','_dementia','_diabetes','_hypertension','_learning_disability']\n", + "input_path = 'released'\n", + "# output_path_16 = 'from_jobserver/released\n", + "suffixes = ['','_missing']\n", + "suffix = ''\n", + "code_dict_5 = {\n", + " \"imd\": {\n", + " 0: \"Unknown\",\n", + " 1: \"1 Most deprived\",\n", + " 2: \"2\",\n", + " 3: \"3\",\n", + " 4: \"4\",\n", + " 5: \"5 Least deprived\",\n", + " },\n", + " \"any\": {1: \"Asian\", 2: \"Black\", 3: \"Mixed\", 4: \"White\", 5: \"Other\"},\n", + " \"supplemented\": {1: \"Asian\", 2: \"Black\", 3: \"Mixed\", 4: \"White\", 5: \"Other\"},\n", + " \"ethnicity_new_5\": {1: \"Asian\", 2: \"Black\", 3: \"Mixed\", 4: \"White\", 5: \"Other\"},\n", + " \"ethnicity_primis_5\": {1: \"Asian\", 2: \"Black\", 3: \"Mixed\", 4: \"White\", 5: \"Other\"},\n", + "}\n", + "lowerlist_5 = [x.lower() for x in (list(code_dict_5[\"ethnicity_new_5\"].values()))]\n", + "# Code dictionary\n", + "code_dict_16 = {\n", + " \"imd\": {\n", + " 0: \"Unknown\",\n", + " 1: \"1 Most deprived\",\n", + " 2: \"2\",\n", + " 3: \"3\",\n", + " 4: \"4\",\n", + " 5: \"5 Least deprived\",\n", + " },\n", + " \"any\": {\n", + " 1: \"Indian\",\n", + " 2: \"Pakistani\",\n", + " 3: \"Bangladeshi\",\n", + " 4: \"Other_Asian\",\n", + " 5: \"Caribbean\",\n", + " 6: \"African\",\n", + " 7: \"Other_Black\",\n", + " 8: \"White_and_Black_Caribbean\",\n", + " 9: \"White_and_Black_African\",\n", + " 10: \"White_and_Asian\",\n", + " 11: \"Other_Mixed\",\n", + " 12: \"White_British\",\n", + " 13: \"White_Irish\",\n", + " 14: \"Other_White\",\n", + " 15: \"Chinese\",\n", + " 16: \"Any_other_ethnic_group\",\n", + " },\n", + " \"supplemented\": {\n", + " 1: \"Indian\",\n", + " 2: \"Pakistani\",\n", + " 3: \"Bangladeshi\",\n", + " 4: \"Other_Asian\",\n", + " 5: \"Caribbean\",\n", + " 6: \"African\",\n", + " 7: \"Other_Black\",\n", + " 8: \"White_and_Black_Caribbean\",\n", + " 9: \"White_and_Black_African\",\n", + " 10: \"White_and_Asian\",\n", + " 11: \"Other_Mixed\",\n", + " 12: \"White_British\",\n", + " 13: \"White_Irish\",\n", + " 14: \"Other_White\",\n", + " 15: \"Chinese\",\n", + " 16: \"Any_other_ethnic_group\",\n", + " },\n", + " \"ethnicity_16\": {\n", + " 1: \"Indian\",\n", + " 2: \"Pakistani\",\n", + " 3: \"Bangladeshi\",\n", + " 4: \"Other_Asian\",\n", + " 5: \"Caribbean\",\n", + " 6: \"African\",\n", + " 7: \"Other_Black\",\n", + " 8: \"White_and_Black_Caribbean\",\n", + " 9: \"White_and_Black_African\",\n", + " 10: \"White_and_Asian\",\n", + " 11: \"Other_Mixed\",\n", + " 12: \"White_British\",\n", + " 13: \"White_Irish\",\n", + " 14: \"Other_White\",\n", + " 15: \"Chinese\",\n", + " 16: \"Any_other_ethnic_group\",\n", + " },\n", + " \"ethnicity_new_16\": {\n", + " 1: \"Indian\",\n", + " 2: \"Pakistani\",\n", + " 3: \"Bangladeshi\",\n", + " 4: \"Other_Asian\",\n", + " 5: \"Caribbean\",\n", + " 6: \"African\",\n", + " 7: \"Other_Black\",\n", + " 8: \"White_and_Black_Caribbean\",\n", + " 9: \"White_and_Black_African\",\n", + " 10: \"White_and_Asian\",\n", + " 11: \"Other_Mixed\",\n", + " 12: \"White_British\",\n", + " 13: \"White_Irish\",\n", + " 14: \"Other_White\",\n", + " 15: \"Chinese\",\n", + " 16: \"Any_other_ethnic_group\",\n", + " },\n", + " \"ethnicity_primis_16\": {\n", + " 1: \"Indian\",\n", + " 2: \"Pakistani\",\n", + " 3: \"Bangladeshi\",\n", + " 4: \"Other_Asian\",\n", + " 5: \"Caribbean\",\n", + " 6: \"African\",\n", + " 7: \"Other_Black\",\n", + " 8: \"White_and_Black_Caribbean\",\n", + " 9: \"White_and_Black_African\",\n", + " 10: \"White_and_Asian\",\n", + " 11: \"Other_Mixed\",\n", + " 12: \"White_British\",\n", + " 13: \"White_Irish\",\n", + " 14: \"Other_White\",\n", + " 15: \"Chinese\",\n", + " 16: \"Any_other_ethnic_group\",\n", + " },\n", + "}\n", + "\n", + "definition_dict = {\n", + " \"ethnicity_new_5\": \"5 SNOMED:2022\",\n", + " \"ethnicity_primis_5\": \"5 PRIMIS:2021\",\n", + " \"ethnicity_5\": \"5 CTV3:2020\",\n", + " \"ethnicity_new_16\": \"16 SNOMED:2022\",\n", + " \"ethnicity_primis_16\": \"16 PRIMIS:2021\",\n", + " \"ethnicity_16\": \"16 CTV3:2020\",\n", + " \"any\": \"Supplemented\",\n", + " \"supplemented\": \"Supplemented\"\n", + "}\n", + "\n", + "output_path = f'{input_path}/made_locally'\n", + "group_5 = \"5\"\n", + "group_16=\"16\"\n", + "\n", + "exists = os.path.exists(f\"../output/{output_path}\")\n", + "if not exists:\n", + " os.makedirs(f\"../output/{output_path}\")\n", + "\n", + "\n", + "########################## SPECIFY ANALYSES TO RUN HERE ##############################\n", + "\n", + "\n", + "def main():\n", + " local_patient_counts(\n", + " definitions_sus_5, group_5, input_path, output_path, code_dict_5, definition_dict, categories=False,missing=False\n", + " )\n", + " local_patient_counts(\n", + " definitions_supplemented_5, group_5, input_path, output_path, code_dict_5, definition_dict, categories=True, missing=False\n", + " )\n", + " \n", + " local_patient_counts(\n", + " definitions_supplemented_16, group_16, input_path, output_path, code_dict_16, definition_dict, categories=True, missing=False\n", + " )\n", + " local_latest_common( ['ethnicity_new_5'], input_path,output_path, code_dict_5, definition_dict,suffix\n", + " )\n", + " local_state_change(\n", + " ['ethnicity_new_5'], input_path,output_path, code_dict_5, definition_dict,\n", + " )\n", + "\n", + "########################## DO NOT EDIT – RUNS SCRIPT ##############################\n", + "if __name__ == \"__main__\":\n", + " main()\n" + ] + } + ], + "metadata": { + "kernelspec": { + "display_name": "base", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.9.7" + }, + "orig_nbformat": 4, + "vscode": { + "interpreter": { + "hash": "bd7deed66f04c8f1cb07fbe5b34625baefe8e7d41af3b53c9662fc8ba397df1b" + } + } + }, + "nbformat": 4, + "nbformat_minor": 2 +} diff --git a/notebooks_jupyter/test.ipynb b/notebooks_jupyter/test.ipynb new file mode 100644 index 0000000..fe5d24c --- /dev/null +++ b/notebooks_jupyter/test.ipynb @@ -0,0 +1,27 @@ +{ + "cells": [], + "metadata": { + "interpreter": { + "hash": "bd7deed66f04c8f1cb07fbe5b34625baefe8e7d41af3b53c9662fc8ba397df1b" + }, + "kernelspec": { + "display_name": "Python 3.9.7 ('base')", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.9.7" + } + }, + "nbformat": 4, + "nbformat_minor": 4 +} diff --git a/notebooks_r/report.Rmd b/notebooks_r/report.Rmd new file mode 100644 index 0000000..791b207 --- /dev/null +++ b/notebooks_r/report.Rmd @@ -0,0 +1,1681 @@ +--- +title: "Identifying Ethnicity in OpenSAFELY-TPP" +output: html_document +--- + +```{r setup, include=FALSE} +knitr::opts_chunk$set(echo = FALSE, warning = FALSE, message = FALSE) + +# Import libraries +library("here") +library("tidyverse") +library("gt") +library("gtsummary") +library("cowplot") +library("RColorBrewer") +library("knitr") +library("ggsci") +library("glue") +library("ggalluvial") +library("ggrepel") +library("scales") + +label_number_n <- label_number(1, 1, big.mark = ",") + +levels_16 <- c("Indian", "Pakistani", "Bangladeshi", "Other_Asian", "Caribbean", "African", "Other_Black", "White_and_Black_Caribbean", "White_and_Black_African", "White_and_Asian", "Other_Mixed", "White_British", "White_Irish", "Other_White", "Chinese", "Any_other_ethnic_group") + +levels_5 <- c("Asian", "Black", "Mixed", "White", "Other") +``` + +
+ +This short report describes how ethnicity can be identified in the OpenSAFELY-TPP database, and the strengths and weaknesses of the methods. Ethnicity is known to be an important determinant of health outcomes, particularly during the COVID-19 outbreak where a complex interplay of social and biological factors resulted in increased exposure, reduced protection, and increased severity of illness. The recording of patients' ethnic group in primary care can support efforts to achieve equity in service provision and outcomes. + +The [NHS Data Model and Dictionary](https://www.datadictionary.nhs.uk/data_elements/ethnic_category.html?hl=ethnicity) states that ethnic data groups defined in the [2001 census](https://www.ethnicity-facts-figures.service.gov.uk/style-guide/ethnic-groups#2001-census) is the national mandatory standard for the collection and analysis of ethnicity. + +In OpenSAFELY-TPP, there is no categorical "ethnicity" variable to record this information. Rather, ethnicity is recorded using clinical codes, like any other clinical or administrative event, with specific codes relating to specific ethnic groups. + +We define two codelists to capture primary care ethnicity in OpenSAFELY-TPP :  One Clinical Terms Version 3 (CTV3) Codelist "[CTV3:2020](https://www.opencodelists.org/codelist/opensafely/ethnicity/2020-04-27)", and one systematised nomenclature of medicine clinical terms (SNOMED CT) codelist "[SNOMED:2022](https://www.opencodelists.org/codelist/opensafely/ethnicity-snomed-0removed/2e641f61/)". + +It is common for OpenSAFELY studies to supplement the primary care recorded ethnicity, where missing, with ethnicity data from the Secondary Uses Service (SUS). This report has focussed solely on the primary care recorded ethnicity. The representativeness of the CTV3:2020 coded ethnicity supplemented with SUS data has been [reported previously](https://wellcomeopenresearch.org/articles/7-191/v1). + +This is a living document that will be updated to reflect changes to the OpenSAFELY-TPP database and the patient records within. + +## OpenSAFELY + +OpenSAFELY is an analytics platform for conducting analyses on Electronic Health Records inside the secure environment where the records are held. This has multiple benefits: + +* We don't transport large volumes of potentially disclosive pseudonymised patient data outside of the secure environments for analysis + +* Analyses can run in near real-time as records are ready for analysis as soon as they appear in the secure environment + +* All infrastructure and analysis code is stored in GitHub repositories, which are open for security review, scientific review, and re-use + +A key feature of OpenSAFELY is the use of study definitions, which are formal specifications of the datasets to be generated from the OpenSAFELY database. This takes care of much of the complex Electronic Healthcare Records (EHR) data wrangling required to create a dataset in an analysis-ready format. It also creates a library of standardised and validated variable definitions that can be deployed consistently across multiple projects. + +The purpose of this report is to describe the main variables that relate ethnicity, and their relative strengths and weaknesses. + +## Available Records + +OpenSAFELY-TPP runs inside TPP's data centre which contains the primary care records for all patients registered at practices using TPP's SystmOne Clinical Information System. This data centre also imports external datasets from other sources, including A&E attendances and hospital admissions from NHS Digital's Secondary Use Service, and death registrations from the ONS. More information on available data sources can be found within the [OpenSAFELY documentation](https://docs.opensafely.org/data-sources/intro/). + +## Methods + +We define two codelists to capture primary care ethnicity in OpenSAFELY-TPP : "[CTV3:2020](https://www.opencodelists.org/codelist/opensafely/ethnicity/2020-04-27)" and "[SNOMED:2022](https://www.opencodelists.org/codelist/opensafely/ethnicity-snomed-0removed/2e641f61/)". + +## Completeness of ethnicity data + +To evaluate how well each of these codelists are populated, the proportion of patients with ethnicity recorded (that is, the presence of any code in the codelist in the patient record) was calculated for patients registered as of 1 January 2022. + +We examine trends across the whole population and by each of the following demographic and clinical subgroups to detect any inequalities. + +Demographic covariates: + +- Age band + +- Sex + +- Ethnicity + +- Region + +- IMD + +Clinical covariates: + +- Dementia + +- Diabetes + +- Learning disability + +Ethnicity by group + +These codes were grouped into one of two ethnicity groups based on the 2001 Census groups: + +5-level group: + +- Asian or Asian British + +- Black or Black British + +- Mixed + +- White + +- Chinese or other ethnic group + +16-level group: + +- Asian or Asian British + + - Indian + + - Pakistani + + - Bangladeshi + + - Any other Asian background + +- Black or Black British + + - Caribbean + + - African + + - Any other Black background + +- Mixed + + - White and Black Caribbean + + - White and Black African + + - White and Asian + + - Any other Mixed background + +- White + + - British + + - Irish + + - Any other White background + +- Chinese or other ethnic group + + - Chinese + + - Any other + +For patients with multiple ethnicity records, the most recent record was chosen (even if this is later than the cohort date). The proportion of patients with each ethnicity groups was calculated, within each clinical and demographic subgroup. + +## Changes in coded ethnicity groups + +In order to investigate the extent of discrepancies within individual patients' recorded grouped ethnicity the proportion of patients with any grouped ethnicity recorded which does not match their 'latest' recorded grouped ethnicity was calculated for each of the five ethnic groups. + +## Comparison of 'Latest' and 'Most Frequent' coded ethnicity + +The proportion of patients with a recorded latest ethnicity whose most frequently recorded ethnicity does not match their latest recorded ethnicity was calculated for each of the five ethnic groups. + +All patient counts are rounded to the nearest 5. Percentages may not add to exactly 100 due to rounding. + +# Results + +## Completeness of ethnicity data + +```{r} +codelist_counts <- read_csv(here::here("output", "simplified_output", "5_group", "tables", "simple_patient_counts_5_group_new_ctv3_registered.csv")) +``` + +Around `r codelist_counts %>% filter(group=="all")%>%pull(all_filled)/1000000` million patients who have been registered in OpenSAFELY-TPP are identified in all three codelists. CTV3:2020 is the most well-populated with `r codelist_counts %>% filter(group=="all")%>%pull(ethnicity_5_filled)/1000000` million patients having at least one CTV3:2020 recording of ethnicity. + +```{r} +# # patient counts +### New SUS +new_sus_prop_table_yesno <- read_csv(here::here("output", "report_tables", "report_patient_counts_5_new_sus_registered.csv")) %>% + filter(subgroup == "Yes" | subgroup == "No") %>% + mutate(subgroup = recode(subgroup, + Yes = "Present", + No = "Absent" + )) %>% + arrange(group, rev(subgroup)) + +new_sus_prop_table <- read_csv(here::here("output", "report_tables", "report_patient_counts_5_new_sus_registered.csv")) %>% + filter(subgroup != "Yes" & subgroup != "No") %>% + bind_rows(new_sus_prop_table_yesno) %>% + mutate( + group = case_when( + group == "age_band" ~ "age band", + group == "learning_disability" ~ "learning disability", + group == "imd" ~ "IMD", + TRUE ~ group + ), + subgroup = recode(subgroup, + F = "Female", + M = "Male" + ), + population = as.character(scales::comma(round(as.numeric(population), 0))), + left_paren = "(", + right_paren = ")" + ) %>% + unite("5 SNOMED:2022 pp inc", left_paren, `5 SNOMED:2022 pp inc`, right_paren, sep = "") %>% + filter(`5 SNOMED:2022` != "- (-)") %>% + select(-`all filled`) + + +#### CTV3 SUS +ctv3_sus_prop_table_yesno <- read_csv(here::here("output", "report_tables", "report_patient_counts_5_ctv3_sus_registered.csv")) %>% + filter(subgroup == "Yes" | subgroup == "No") %>% + mutate(subgroup = recode(subgroup, + Yes = "Present", + No = "Absent" + )) %>% + arrange(group, rev(subgroup)) + +ctv3_sus_prop_table <- read_csv(here::here("output", "report_tables", "report_patient_counts_5_ctv3_sus_registered.csv")) %>% + filter(subgroup != "Yes" & subgroup != "No") %>% + bind_rows(ctv3_sus_prop_table_yesno) %>% + mutate( + group = case_when( + group == "age_band" ~ "age band", + group == "learning_disability" ~ "learning disability", + group == "imd" ~ "IMD", + TRUE ~ group + ), + subgroup = recode(subgroup, + F = "Female", + M = "Male" + ), + population = as.character(scales::comma(round(as.numeric(population), 0))), + left_paren = "(", + right_paren = ")" + ) %>% + unite("5 CTV3:2020 pp inc", left_paren, `5 CTV3:2020 pp inc`, right_paren, sep = "") %>% + filter(`5 CTV3:2020` != "- (-)") %>% + select(-`all filled`) + +#### CTV3 New +new_ctv3_prop_table_yesno <- read_csv(here::here("output", "report_tables", "report_patient_counts_5_new_ctv3_registered.csv")) %>% + filter(subgroup == "Yes" | subgroup == "No") %>% + mutate(subgroup = recode(subgroup, + Yes = "Present", + No = "Absent" + )) %>% + arrange(group, rev(subgroup)) + +new_ctv3_prop_table <- read_csv(here::here("output", "report_tables", "report_patient_counts_5_new_ctv3_registered.csv")) %>% + filter(subgroup != "Yes" & subgroup != "No") %>% + bind_rows(new_ctv3_prop_table_yesno) %>% + mutate( + group = case_when( + group == "age_band" ~ "age band", + group == "learning_disability" ~ "learning disability", + group == "imd" ~ "IMD", + TRUE ~ group + ), + subgroup = recode(subgroup, + F = "Female", + M = "Male" + ), + population = as.character(scales::comma(round(as.numeric(population), 0))), + ) %>% + filter(`5 CTV3:2020` != "- (-)") %>% + select(group, subgroup, `all filled`, population) + + +### combine tables +combined_prop_table <- new_sus_prop_table %>% + left_join(ctv3_sus_prop_table, by = c("group", "subgroup", "population")) %>% + left_join(new_ctv3_prop_table, by = c("group", "subgroup", "population")) %>% + relocate(population, .after = last_col()) + + + +table_cols <- setNames(c("group", "", "SNOMED 2022", "SNOMED 2022 with SUS data", "SNOMED 2022 Percentage point increase\n with SUS data", "CTV3 2020", "CTV3 2020 with SUS data", "CTV3 2020 Percentage point increase\n with SUS data", "In both SNOMED and CTV3","Population"), names(combined_prop_table)) + + +SUS_gt <- combined_prop_table %>% + gt(groupname_col = "group") %>% + cols_label(!!!table_cols) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left", + data_row.padding = px(0) + ) %>% + tab_header( + title = md("Table 1: Count of patients with a recorded ethnicity in OpenSAFELY-TPP (proportion of registered TPP population) by clinical and demographic subgroups. All counts are rounded to the nearest 5."), + ) + +SUS_gt +``` + +
+ +```{r, fig.width=25, fig.height=18} +ctv3_prop_reg <- + read_csv(here::here("output", "sus", "simplified_output", "5_group", "tables", "simple_patient_counts_5_group_ctv3_sus_registered.csv"), col_types = (cols())) %>% + select("group", "subgroup", starts_with("ethnicity_5"), starts_with("any"), "population") %>% + mutate( + ethnicity_5_percentage = round(ethnicity_5_filled / population * 100, 1), + any_percentage = round(any_filled / population * 100, 1), + group = case_when( + group == "age_band" ~ "Age\nBand", + group == "all" ~ "All", + group == "dementia" ~ "Dementia", + group == "diabetes" ~ "Diabetes", + group == "hypertension" ~ "Hypertension", + group == "imd" ~ "IMD", + group == "learning_disability" ~ "Learning\nDisability", + group == "region" ~ "Region", + group == "sex" ~ "Sex" + ), + group = fct_relevel( + group, + "All", "Age\nBand", "Sex", "Region", "IMD", + "Dementia", "Diabetes", "Hypertension", "Learning\nDisability" + ), + subgroup = case_when( + subgroup == "M" ~ "Male", + subgroup == "F" ~ "Female", + TRUE ~ subgroup + ), + across("subgroup", str_replace, "True", "Present"), + across("subgroup", str_replace, "False", "Absent") + ) %>% + filter(subgroup != "missing") %>% + mutate(any_percentage = any_percentage - ethnicity_5_percentage) %>% + pivot_longer( + cols = c(starts_with("ethnicity_5"), starts_with("any")), + names_to = c("ethnicity", ".value"), + names_pattern = "(.*)_(.*)" + ) %>% + mutate( + ethnicity = case_when( + ethnicity == "ethnicity_5" ~ "Primary Care only", + ethnicity == "any" ~ "Supplemented with SUS data" + ), + ethnicity = fct_relevel(ethnicity, "Supplemented with SUS data", "Primary Care only"), + codelist = "CTV3 2020" + ) + +new_prop_reg <- + read_csv(here::here("output", "sus", "simplified_output", "5_group", "tables", "simple_patient_counts_5_group_new_sus_registered.csv"), col_types = (cols())) %>% + select("group", "subgroup", starts_with("ethnicity_new_5"), starts_with("any"), "population") %>% + mutate( + ethnicity_new_5_percentage = round(ethnicity_new_5_filled / population * 100, 1), + any_percentage = round(any_filled / population * 100, 1), + group = case_when( + group == "age_band" ~ "Age\nBand", + group == "all" ~ "All", + group == "dementia" ~ "Dementia", + group == "diabetes" ~ "Diabetes", + group == "hypertension" ~ "Hypertension", + group == "imd" ~ "IMD", + group == "learning_disability" ~ "Learning\nDisability", + group == "region" ~ "Region", + group == "sex" ~ "Sex" + ), + group = fct_relevel( + group, + "All", "Age\nBand", "Sex", "Region", "IMD", + "Dementia", "Diabetes", "Hypertension", "Learning\nDisability" + ), + subgroup = case_when( + subgroup == "M" ~ "Male", + subgroup == "F" ~ "Female", + TRUE ~ subgroup + ), + across("subgroup", str_replace, "True", "Present"), + across("subgroup", str_replace, "False", "Absent") + ) %>% + filter(subgroup != "missing") %>% + mutate(any_percentage = any_percentage - ethnicity_new_5_percentage) %>% + pivot_longer( + cols = c(starts_with("ethnicity_new_5"), starts_with("any")), + names_to = c("ethnicity", ".value"), + names_pattern = "(.*)_(.*)" + ) %>% + mutate( + ethnicity = case_when( + ethnicity == "ethnicity_new_5" ~ "Primary Care only", + ethnicity == "any" ~ "Supplemented with SUS data" + ), + ethnicity = fct_relevel(ethnicity, "Supplemented with SUS data", "Primary Care only"), + codelist = "SNOMED 2022" + ) + + +prop_reg <- new_prop_reg %>% + bind_rows(ctv3_prop_reg) + + +prop_reg_plot <- prop_reg %>% + ggplot(aes(x = subgroup, y = percentage, alpha = ethnicity, fill = group)) + + scale_alpha_discrete(range = c(0.2, 1)) + + geom_hline(data = prop_reg %>% filter(codelist == "CTV3 2020"), aes(yintercept = percentage[which(group == "All" & ethnicity == "Primary Care only" & codelist == "CTV3 2020")]), color = "#00468BFF", alpha = 0.5) + + geom_hline(data = prop_reg %>% filter(codelist == "CTV3 2020"), aes(yintercept = sum(percentage[which(group == "All" & codelist == "CTV3 2020")])), color = "#00468BFF", alpha = 0.1) + + geom_hline(data = prop_reg %>% filter(codelist == "SNOMED 2022"), aes(yintercept = percentage[which(group == "All" & ethnicity == "Primary Care only" & codelist == "SNOMED 2022")]), color = "#00468BFF", alpha = 0.5) + + geom_hline(data = prop_reg %>% filter(codelist == "SNOMED 2022"), aes(yintercept = sum(percentage[which(group == "All" & codelist == "SNOMED 2022")])), color = "#00468BFF", alpha = 0.1) + + geom_bar(stat = "identity", position = "stack") + + facet_grid(group + codelist ~ ., scales = "free_y", space = "free_y") + + theme_classic() + + theme(text = element_text(size = 20)) + + theme(axis.text.x = element_text( + size = 20, + hjust = 0.5, + vjust = 0 + )) + + theme(strip.text.y = element_text(angle = 0)) + + coord_flip() + + scale_fill_lancet() + + xlab("") + + ylab("\nProportion of registered TPP patients") + + guides(fill = "none", alpha = guide_legend("")) + + theme(legend.position = "bottom") + +prop_reg_plot +``` + +
+ +## Ethnicity by group + +### 5 Group + +```{r} +codelist_counts_categories <- read_csv(here::here("output", "simplified_output", "5_group", "tables", "simple_patient_counts_categories_5_group_new_ctv3_registered.csv")) +``` + +The SNOMED:2022 is the most well-populated codelist for White (`r label_number_n(signif(codelist_counts_categories %>% filter(group=="all")%>% pull( White_ethnicity_new_5_filled),3))`), Mixed (`r label_number_n(signif(codelist_counts_categories %>% filter(group=="all")%>% pull( Mixed_ethnicity_new_5_filled),3))`), Asian (`r label_number_n(signif(codelist_counts_categories %>% filter(group=="all")%>% pull( Asian_ethnicity_new_5_filled),3))`) and Black (`r label_number_n(signif(codelist_counts_categories %>% filter(group=="all")%>% pull( Black_ethnicity_new_5_filled),3))`) ethnicities. The CTV3:2020 codelist classifies more people as Other than the SNOMED:2022 codelist (`r label_number_n(signif(codelist_counts_categories %>% filter(group=="all")%>% pull( Other_ethnicity_5_filled),3))` and `r label_number_n(signif(codelist_counts_categories %>% filter(group=="all")%>% pull( Other_ethnicity_new_5_filled),3))` respectively), however, the CTV3:2020 codelist includes some codes relating to religion rather than ethnicity (e.g. "XaJSe: Muslim - ethnic category 2001 census") which were excluded from the SNOMED:2022 codelist. + +```{r} +# patient counts 5 group +new_SUS5yesno <- read_csv(here::here("output", "report_tables", "report_patient_counts_categories_5_new_sus_registered.csv")) %>% + filter(subgroup == "Yes" | subgroup == "No") %>% + mutate(subgroup = recode(subgroup, + Yes = "Present", + No = "Absent" + )) %>% + arrange(group, rev(subgroup)) + +new_SUS5 <- read_csv(here::here("output", "report_tables", "report_patient_counts_categories_5_new_sus_registered.csv")) %>% + filter(subgroup != "Yes" & subgroup != "No") %>% + bind_rows(new_SUS5yesno) %>% + mutate( + group = case_when( + group == "age_band" ~ "age band", + group == "learning_disability" ~ "learning disability", + group == "imd" ~ "IMD", + TRUE ~ group + ), + subgroup = recode(subgroup, + F = "Female", + M = "Male" + ) + ) %>% + filter(`Asian 5 SNOMED:2022` != "- (-)") + +### CTV3 +ctv3_SUS5yesno <- read_csv(here::here("output", "report_tables", "report_patient_counts_categories_5_ctv3_sus_registered.csv")) %>% + filter(subgroup == "Yes" | subgroup == "No") %>% + mutate(subgroup = recode(subgroup, + Yes = "Present", + No = "Absent" + )) %>% + arrange(group, rev(subgroup)) + +ctv3_SUS5 <- read_csv(here::here("output", "report_tables", "report_patient_counts_categories_5_ctv3_sus_registered.csv")) %>% + filter(subgroup != "Yes" & subgroup != "No") %>% + bind_rows(ctv3_SUS5yesno) %>% + mutate( + group = case_when( + group == "age_band" ~ "age band", + group == "learning_disability" ~ "learning disability", + group == "imd" ~ "IMD", + TRUE ~ group + ), + subgroup = recode(subgroup, + F = "Female", + M = "Male" + ) + ) %>% + filter(`Asian 5 CTV3:2020` != "- (-)") + + +combined_prop_5_table <- ctv3_SUS5 %>% + left_join(new_SUS5, by = c("group", "subgroup")) %>% + rename_with(~ gsub(" 5", "", .)) %>% # remove extra 5 + rename_with(~ gsub("CTV3 ", "CTV3:2020 ", .)) %>% # remove extra 5 + select("group", "subgroup", sort(names(.))) %>% + relocate(contains("Other"), .after = last_col()) + + +my_cols <- setNames(c("group", "", rep(c("CTV3 2020", "CTV3 2020 with SUS", "SNOMED 2022", "SNOMED 2022 with SUS"), 5)), names(combined_prop_5_table)) + +SUS5 <- combined_prop_5_table %>% + gt(groupname_col = "group") %>% + tab_spanner(label = "Asian", columns = c(3:6)) %>% + tab_spanner(label = "Black", columns = c(7:10)) %>% + tab_spanner(label = "Mixed", columns = c(11:14)) %>% + tab_spanner(label = "White", columns = c(15:18)) %>% + tab_spanner(label = "Other", columns = c(19:22)) %>% + cols_label(!!!my_cols) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 2: Count of patients with a recorded ethnicity in OpenSAFELY TPP by ethnicity group (proportion of registered TPP population) and clinical and demographic subgroups. All counts are rounded to the nearest 5. "), + ) %>% + tab_options(., container.width = 1200) %>% + tab_options( + data_row.padding = px(0) + ) + + + +SUS5 +``` + +
+ +```{r, fig.width=25, fig.height=30} +new_prop_reg_cat <- + read_csv(here::here("output", "sus", "simplified_output", "5_group", "tables", "simple_patient_counts_categories_5_group_new_sus_registered.csv"), col_types = (cols())) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_5_filled", "", .), contains("_5_filled")) %>% + select(-contains("filled"), -contains("missing"), -contains("sus"), -contains("any")) %>% + mutate( + Asian_supplementeddiff = Asian_supplemented - Asian_new, + Black_supplementeddiff = Black_supplemented - Black_new, + Mixed_supplementeddiff = Mixed_supplemented - Mixed_new, + White_supplementeddiff = White_supplemented - White_new, + Other_supplementeddiff = Other_supplemented - Other_new, + cohort = "SNOMED 2022" + ) + +ctv3_prop_reg_cat <- + read_csv(here::here("output", "sus", "simplified_output", "5_group", "tables", "simple_patient_counts_categories_5_group_ctv3_sus_registered.csv"), col_types = (cols())) %>% + rename_with(~ sub("ethnicity_", "new_", .), contains("ethnicity_")) %>% + rename_with(~ sub("_5_filled", "", .), contains("_5_filled")) %>% + select(-contains("filled"), -contains("missing"), -contains("sus"), -contains("any")) %>% + mutate( + Asian_supplementeddiff = Asian_supplemented - Asian_new, + Black_supplementeddiff = Black_supplemented - Black_new, + Mixed_supplementeddiff = Mixed_supplemented - Mixed_new, + White_supplementeddiff = White_supplemented - White_new, + Other_supplementeddiff = Other_supplemented - Other_new, + cohort = "CTV3 2020" + ) + +prop_reg_cat <- new_prop_reg_cat %>% + bind_rows(ctv3_prop_reg_cat) + + +prop_reg_cat_pivot <- prop_reg_cat %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "codelist"), + names_pattern = "(.*)_(.*)", + values_to = "n" + ) %>% + mutate( + percentage = round(n / population * 100, 1), + group = case_when( + group == "age_band" ~ "Age\nBand", + group == "all" ~ "All", + group == "dementia" ~ "Dementia", + group == "diabetes" ~ "Diabetes", + group == "hypertension" ~ "Hypertension", + group == "imd" ~ "IMD", + group == "learning_disability" ~ "Learning\nDisability", + group == "region" ~ "Region", + group == "sex" ~ "Sex" + ), + group = fct_relevel( + group, + "All", "Age\nBand", "Sex", "Region", "IMD", + "Dementia", "Diabetes", "Hypertension", "Learning\nDisability" + ), + subgroup = case_when( + subgroup == "M" ~ "Male", + subgroup == "F" ~ "Female", + TRUE ~ subgroup + ), + across("subgroup", str_replace, "True", "Present"), + across("subgroup", str_replace, "False", "Absent"), + across("ethnicity", str_replace, "_ethnicity_new_5_filled", "") + ) %>% + mutate( + ethnicity = fct_relevel( + ethnicity, + levels_5 + ) + ) + +prop_reg_cat_hline_new <- prop_reg_cat_pivot %>% + arrange(ethnicity, group) %>% + group_by(ethnicity, codelist) %>% + mutate(percentage = first(percentage)) %>% + ungroup() %>% + filter(codelist == "Primary Care only") + +prop_reg_cat_hline_supplemented <- prop_reg_cat_pivot %>% + arrange(ethnicity, group) %>% + group_by(ethnicity, codelist) %>% + mutate(percentage = first(percentage)) %>% + ungroup() %>% + filter(codelist == "supplemented") + +prop_reg_cat_pivot <- prop_reg_cat_pivot %>% + mutate( + codelist = case_when( + codelist == "new" ~ "Primary Care only", + codelist == "supplementeddiff" ~ "Supplemented with SUS data", + T ~ codelist + ), + codelist = fct_relevel(codelist, "Supplemented with SUS data", "Primary Care only"), + ) + + + +prop_reg_cat_plot <- prop_reg_cat_pivot %>% + filter( + codelist != "supplemented", + subgroup != "missing" + ) %>% + ggplot(aes(x = subgroup, y = percentage, alpha = codelist, fill = group)) + + scale_alpha_discrete(range = c(0.2, 1)) + + # geom_hline( + # data = prop_reg_cat_hline_new, + # aes(yintercept = percentage), color = "#00468BFF", alpha = 0.6 + # ) + + # geom_hline( + # data = prop_reg_cat_hline_supplemented, + # aes(yintercept = percentage), color = "#00468BFF", alpha = 0.1 + # ) + + + # geom_hline(data = prop_reg_cat_hline_new %>% filter(cohort == "CTV3 2020" & codelist == "Primary Care only"),aes(yintercept = percentage[which(group == "All" & codelist == "Primary Care only" & cohort=="CTV3 2020")]), color = "#00468BFF", alpha = 0.5) + + # # geom_hline(data = prop_reg_cat_hline_new %>% filter(cohort == "CTV3 2020"), aes(yintercept = percentage), color = "#00468BFF", alpha = 0.1) + + # # geom_hline(data = prop_reg_cat_hline_supplemented %>% filter(cohort == "SNOMED 2022"),aes(yintercept = percentage), color = "#00468BFF", alpha = 0.5) + + # # geom_hline(data = prop_reg_cat_hline_supplemented %>% filter(cohort == "SNOMED 2022"), aes(yintercept = percentage), color = "#00468BFF", alpha = 0.1) + + # # + # # + + + geom_bar(stat = "identity", position = "stack") + + facet_grid(group + cohort ~ ethnicity, scales = "free", space = "free", shrink = FALSE) + + theme_classic() + + theme(text = element_text(size = 30)) + + theme(axis.text.x = element_text( + size = 25, + hjust = 0.5, + vjust = 0 + )) + + theme(strip.text.y = element_text(angle = 0)) + + coord_flip() + + scale_fill_lancet() + + xlab("") + + ylab("\nProportion of registered TPP patients") + + guides(fill = "none", alpha = guide_legend("")) + + theme( + legend.position = "bottom", + panel.spacing = unit(1.1, "lines") + ) + +prop_reg_cat_plot +``` + +### 16 Group + +```{r} +codelist_counts_categories_16 <- read_csv(here::here("output", "simplified_output", "16_group", "tables", "simple_patient_counts_categories_16_group_new_ctv3_registered.csv")) +``` + +In the 16 group ethnicity the Other ethnic group is expanded to Chinese and Any other ethnic group. For Chinese the SNOMED:2022 codelist is most well-populated (`r label_number_n(signif(codelist_counts_categories_16 %>% filter(group=="all")%>% pull(Chinese_ethnicity_new_16_filled),3))`) and for Any other ethnic group the CTV3:2020 codelist is most well populated (`r label_number_n(signif(codelist_counts_categories_16 %>% filter(group=="all")%>% pull(Any_other_ethnic_group_ethnicity_16_filled),3))`) . + +```{r, fig.width=12, fig.height=18} +new_SUS16yesno <- read_csv(here::here("output", "report_tables", "report_patient_counts_categories_16_new_sus_registered.csv")) %>% + filter(subgroup == "Yes" | subgroup == "No") %>% + mutate(subgroup = recode(subgroup, + Yes = "Present", + No = "Absent" + )) + +# patient counts 16 group +# New Snomed codelist +new_SUS16 <- read_csv(here::here("output", "report_tables", "report_patient_counts_categories_16_new_sus_registered.csv")) %>% + filter(subgroup != "Yes" & subgroup != "No") %>% + bind_rows(new_SUS16yesno) %>% + mutate( + group = case_when( + group == "age_band" ~ "age band", + group == "learning_disability" ~ "learning disability", + group == "imd" ~ "IMD", + TRUE ~ group + ), + subgroup = recode(subgroup, + F = "Female", + M = "Male" + ) + ) %>% + filter(`Indian 16 SNOMED:2022` != "- (-)") + +### CTV3 codelist +ctv3_SUS16yesno <- read_csv(here::here("output", "report_tables", "report_patient_counts_categories_16_ctv3_sus_registered.csv")) %>% + filter(subgroup == "Yes" | subgroup == "No") %>% + mutate(subgroup = recode(subgroup, + Yes = "Present", + No = "Absent" + )) + +# patient counts 16 group +ctv3_SUS16 <- read_csv(here::here("output", "report_tables", "report_patient_counts_categories_16_ctv3_sus_registered.csv")) %>% + filter(subgroup != "Yes" & subgroup != "No") %>% + bind_rows(ctv3_SUS16yesno) %>% + mutate( + group = case_when( + group == "age_band" ~ "age band", + group == "learning_disability" ~ "learning disability", + group == "imd" ~ "IMD", + TRUE ~ group + ), + subgroup = recode(subgroup, + F = "Female", + M = "Male" + ) + ) %>% + filter(`White British 16 CTV3:2020` != "- (-)") + +ethnicity_16 <- c("Indian", "Pakistani", "Bangladeshi", "Other Asian", "Caribbean", "African", "Other Black", "White and Black Caribbean", "White and Black African", "White and Asian", "Other Mixed", "White British", "White Irish", "Other White", "Chinese", "Any other ethnic group") + +codelist <- c("CTV3:2020", "CTV3:2020 Supplemented", "SNOMED:2022", "SNOMED:2022 Supplemented") +columns_combined <- paste(rep(ethnicity_16, each = length(codelist)), codelist, sep = " ") + +## combine CTV3 and Snomed tables +combined_prop_16_table <- ctv3_SUS16 %>% + left_join(new_SUS16, by = c("group", "subgroup")) %>% + rename_with(~ gsub(" 16", "", .)) %>% # remove extra 5 + rename_with(~ gsub("CTV3 ", "CTV3:2020 ", .)) %>% # remove extra 5 + select("group", "subgroup", columns_combined) + + +my_cols <- setNames(c("group", "", rep(c("CTV3 2020", "CTV3 2020 with SUS", "SNOMED 2022", "SNOMED 2022 with SUS"), 16)), names(combined_prop_16_table)) + + +SUS16 <- combined_prop_16_table %>% + gt(groupname_col = "group") %>% + tab_spanner(label = "Indian", columns = c(3:6)) %>% + tab_spanner(label = "Pakistani", columns = c(7:10)) %>% + tab_spanner(label = "Bangladeshi", columns = c(11:14)) %>% + tab_spanner(label = "Other Asian", columns = c(15:18)) %>% + tab_spanner(label = "Caribbean", columns = c(19:22)) %>% + tab_spanner(label = "African", columns = c(23:26)) %>% + tab_spanner(label = "Other Black", columns = c(27:30)) %>% + tab_spanner(label = "White and Black Caribbean", columns = c(31:34)) %>% + tab_spanner(label = "White and Black African", columns = c(35:38)) %>% + tab_spanner(label = "White and Asian", columns = c(39:42)) %>% + tab_spanner(label = "Other Mixed", columns = c(43:46)) %>% + tab_spanner(label = "White British", columns = c(47:50)) %>% + tab_spanner(label = "White Irish", columns = c(51:54)) %>% + tab_spanner(label = "Other White", columns = c(55:58)) %>% + tab_spanner(label = "Chinese", columns = c(59:62)) %>% + tab_spanner(label = "Any other ethnic group", columns = c(63:66)) %>% + cols_label(!!!my_cols) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Count of patients with a recorded ethnicity in OpenSAFELY TPP by ethnicity group (proportion of registered TPP population) and clinical and demographic subgroups. All counts are rounded to the nearest 5."), + ) %>% + tab_options(., container.width = 3000) %>% + tab_options( + data_row.padding = px(0) + ) + +SUS16 +``` + +## Changes in coded ethnicity groups + +### 5 Group + +```{r} +change_new <- read_csv(here::here("output", "report_tables", glue("report_state_change_new_5_registered.csv"))) %>% + rename( + latest = contains("Latest Ethnicity"), + discordant = contains("Supplemented") + ) + +change_ctv3 <- read_csv(here::here("output", "report_tables", glue("report_state_change_ctv3_5_registered.csv"))) %>% + rename( + latest = contains("Latest Ethnicity"), + discordant = contains("Supplemented") + ) +``` + +Patients whose latest recorded ethnicity were grouped as Mixed were most likely to have a discordant ethnicity recording (`r stringr::str_extract(change_new %>% filter(str_detect(latest, "Mixed")) %>%pull(discordant), pattern = "(?<=\\().*(?=\\))")`% SNOMED:2022, `r stringr::str_extract(change_ctv3 %>% filter(str_detect(latest, "Mixed")) %>%pull(discordant), pattern = "(?<=\\().*(?=\\))")` CTV3:2020). Both codelists had patients with latest recorded ethnicity grouped as Black who also had a recorded ethnicity of White (`r stringr::str_extract(change_new %>% filter(str_detect(latest, "Black")) %>%pull(white), pattern = "(?<=\\().*(?=\\))")`% SNOMED:2022, `r stringr::str_extract(change_ctv3 %>% filter(str_detect(latest, "Black")) %>%pull(white), pattern = "(?<=\\().*(?=\\))")`% CTV3:2020). + + +```{r} +for (codelist in c("new", "ctv3")) { + ifelse(codelist == "new", codelist_name <- "SNOMED:2022", codelist_name <- "CTV3:2020") + + anyrepeated <- read_csv(here::here("output", "report_tables", glue("report_state_change_{codelist}_5_registered.csv"))) %>% + rename_with(~ gsub("SNOMED:2022 ", "", .)) %>% + rename_with(str_to_title) %>% + rename(codelist = contains("Latest Ethnicity")) %>% + gt() %>% + cols_label(codelist = codelist_name) %>% + cols_label(Supplemented = "Any discordant") %>% + tab_spanner(label = "Latest Recorded Ethnicity", columns = 1) %>% + tab_spanner(label = "Any Recorded Ethnicity", columns = c(2:7)) %>% + tab_options( + table.align = "left", + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 4: Count of patients with at least one recording of each ethnicity (proportion of latest ethnicity)."), + ) %>% + tab_options( + data_row.padding = px(0) + ) + + assign(glue("anyrepeated_{codelist}"), anyrepeated) +} +``` + +```{r} +anyrepeated_new +``` +
+```{r} +anyrepeated_ctv3 +``` + +### 16 Group + +```{r} +change_new_16 <- read_csv(here::here("output", "report_tables", glue("report_state_change_new_16_registered.csv"))) %>% + rename( + latest = contains("Latest Ethnicity"), + discordant = contains("Supplemented") + ) + +change_ctv3_16 <- read_csv(here::here("output", "report_tables", glue("report_state_change_ctv3_16_registered.csv"))) %>% + rename( + latest = contains("Latest Ethnicity"), + discordant = contains("Supplemented") + ) +``` + + +Patients whose latest recorded ethnicity were grouped as Other Black were most likely to have a discordant ethnicity recording (`r stringr::str_extract(change_new_16 %>% filter(str_detect(latest, "Other_Black")) %>%pull(discordant), pattern = "(?<=\\().*(?=\\))")`% SNOMED:2022, `r stringr::str_extract(change_ctv3_16 %>% filter(str_detect(latest, "Other_Black")) %>%pull(discordant), pattern = "(?<=\\().*(?=\\))")`% CTV3:2020). + +```{r} +for (codelist in c("new", "ctv3")) { + ifelse(codelist == "new", codelist_name <- "SNOMED:2022", codelist_name <- "CTV3:2020") + + anyrepeated <- read_csv(here::here("output", "report_tables", glue("report_state_change_{codelist}_16_registered.csv"))) %>% + rename_with(~ gsub("SNOMED:2022 ", "", .)) %>% + rename_with(~ gsub("_", " ", .)) %>% + rename_with(str_to_title) %>% + rename(codelist = contains("Latest Ethnicity")) %>% + mutate(codelist = gsub("_", " ", codelist)) %>% + gt() %>% + cols_label(codelist = codelist_name) %>% + cols_label(Supplemented = "Any discordant") %>% + tab_spanner(label = "Latest Recorded Ethnicity", columns = 1) %>% + tab_spanner(label = "Any Recorded Ethnicity", columns = c(2:18)) %>% + tab_options( + table.align = "left", + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 4: Count of patients with at least one recording of each ethnicity (proportion of latest ethnicity)."), + ) %>% + tab_options( + data_row.padding = px(0) + ) + + assign(glue("anyrepeated_{codelist}"), anyrepeated) +} +``` + + +```{r} +anyrepeated_new +``` +
+```{r} +anyrepeated_ctv3 +``` + +## Comparison of 'Latest' and 'Most Frequent' coded ethnicity + + +```{r} +for (codelist in c("new", "ctv3")) { + for (group in c(5, 16)) { + ifelse(codelist == "new", codelist_path <- glue("ethnicity_new_{group}"), codelist_path <- glue("ethnicity_{group}")) + ifelse(codelist == "new", codelist_name <- "SNOMED:2022", codelist_name <- "CTV3:2020") + + discordant_full <- + read_csv(here::here("output", "simplified_output", glue("{group}_group"), "tables", glue("simple_latest_common_{codelist_path}_registered.csv"))) %>% + mutate( + ethnicity = fct_relevel(!!as.name(codelist_path), get(glue("levels_{group}"))), + sum = rowSums(across(where(is.numeric)), na.rm = T) + ) %>% + arrange(ethnicity) %>% + replace(., col(.) == row(.) + 1, NA) %>% + mutate( + any_discordant = rowSums(across(where(is.numeric)), na.rm = T) - sum, + any_discordant_perc = round(any_discordant / sum * 100, 0), + discordantcombined = glue("{any_discordant} ({any_discordant_perc})") + ) + + assign(glue("discordant_{codelist}_{group}"), discordant_full) + + discordant <- discordant_full %>% + select(ethnicity, discordantcombined) + + latestcommon <- read_csv(here::here("output", "report_tables", glue("report_latest_common_{codelist}_{group}_expanded_registered.csv"))) %>% + rename_with(str_to_title) %>% + rename(ethnicity = contains("Latest Ethnicity")) %>% + inner_join(discordant, by = "ethnicity") %>% + gt() %>% + cols_label( + ethnicity = codelist_name, + discordantcombined = "" + ) %>% + tab_spanner(label = "Latest Recorded Ethnicity", columns = 1) %>% + tab_spanner(label = "Most Frequent Ethnicity", columns = c(2:(group + 1))) %>% + tab_spanner(label = "Any Discordant Ethnicity", columns = c(group + 2)) %>% + tab_options( + table.align = "left", + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_options( + data_row.padding = px(0) + ) + + assign(glue("latestcommon_{codelist}_{group}"), latestcommon) + } +} +``` + + +### 5 Group + +Overall `r round((1 - (sum(discordant_new_5$any_discordant)/sum(discordant_new_5$sum))) *100,0)`% of the latest 5 group ethnicity matched the most frequent 5 group ethnicity for all codelists. `r round((1 - (discordant_new_5 %>% filter(ethnicity_new_5=="White") %>% select(any_discordant) / discordant_new_5 %>% filter(ethnicity_new_5=="White") %>% select(sum))) *100,0)`% of those with the most recent ethnicity classified as White also had the most frequent ethnicity White for both codelists. Mixed was the least concordant for all both codelists with `r round(((discordant_new_5 %>% filter(ethnicity_new_5=="Mixed") %>% select(any_discordant) / discordant_new_5 %>% filter(ethnicity_new_5=="Mixed") %>% select(sum))) *100,0)`% of those with the most recent ethnicity Mixed also had the most frequent ethnicity Mixed. Of those with latest ethnicity Black `r round(((discordant_new_5 %>% filter(ethnicity_new_5=="Black") %>% select(ethnicity_new_5_white) / discordant_new_5 %>% filter(ethnicity_new_5=="Black") %>% select(sum))) *100,0)`% also had the most frequent ethnicity White. + + + + +```{r} +latestcommon_new_5 +``` +
+```{r} +latestcommon_ctv3_5 +``` + +### 16 group + +Expanding to the 16 group the percentage of latest ethnicity that match the most frequent ethnicity falls to `r round((1 - (sum(discordant_new_16$any_discordant)/sum(discordant_new_16$sum))) *100,0)`% for both SNOMED:2022 and CTV3:2020. White British was the most concordant for both SNOMED:2022 and CTV3:2020 with `r round((1 - (discordant_new_16 %>% filter(ethnicity_new_16=="White_British") %>% select(any_discordant) / discordant_new_16 %>% filter(ethnicity_new_16=="White_British") %>% select(sum))) *100,0)`% and `r round((1 - (discordant_ctv3_16 %>% filter(ethnicity_16=="White_British") %>% select(any_discordant) / discordant_ctv3_16 %>% filter(ethnicity_16=="White_British") %>% select(sum))) *100,0)`%, respectively, of those with the most recent ethnicity classified as White British also had the most frequent ethnicity White British. For both SNOMED:2022 and CTV3:2020 Other Black was the least concordant, `r round((1 - (discordant_new_16 %>% filter(ethnicity_new_16=="Other_Black") %>% select(any_discordant) / discordant_new_16 %>% filter(ethnicity_new_16=="Other_Black") %>% select(sum))) *100,0)`% of those with the most recent ethnicity Other Black also had the most frequent ethnicity Other Black. + +```{r} +latestcommon_new_16 %>% + tab_options(., container.width = 1600) +``` +
+```{r} +latestcommon_ctv3_16 %>% + tab_options(., container.width = 1600) +``` + +# Consistency of ethnicity recording across data sources (primary care versus secondary care) + +```{r} +for (codelist in c("new", "ctv3")) { + ifelse(codelist == "new", codelist_name <- "SNOMED:2022", codelist_name <- "CTV3:2020") + df_sus_new_cross <- read_csv(here::here("output", "sus", "simplified_output", "5_group", "tables", glue("simple_{codelist}_sus_crosstab_long_registered.csv"))) %>% + rename_with(~"ethnicity", contains("ethnicity_") & !contains("sus")) + + ethnicity_cat <- + read_csv(here::here("output", "sus", "simplified_output", "5_group", "tables", glue("simple_patient_counts_categories_5_group_{codelist}_sus_registered.csv")), col_types = (cols())) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_new", "", .), contains("_new")) %>% + rename_with(~ sub("_ctv3", "", .), contains("_ctv3")) %>% + rename_with(~ sub("_5_filled", "", .), contains("_5_filled")) %>% + select(-contains("filled"), -contains("missing"), -contains("sus")) %>% + mutate( + Asian_anydiff = Asian_any - Asian, + Black_anydiff = Black_any - Black, + Mixed_anydiff = Mixed_any - Mixed, + White_anydiff = White_any - White, + Other_anydiff = Other_any - Other, + ) + + ethnicity_cat_pivot <- ethnicity_cat %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "codelist"), + names_pattern = "(.*)_(.*)", + values_to = "n" + ) %>% + filter(codelist == "new", group == "all") %>% + summarise( + ethnicity, + population = n + ) %>% + bind_rows(population) + + + df_sus_new_cross_perc <- df_sus_new_cross %>% + left_join(ethnicity_cat_pivot, by = "ethnicity") %>% + mutate( + percentage = round(`0` / population * 100, 1), + ethnicity = fct_relevel( + ethnicity, + levels_5 + ), + ethnicity_sus_5 = fct_relevel( + ethnicity_sus_5, + levels_5 + ), + left_paren = " (", + right_paren = ")", + N = scales::comma(as.numeric(`0`)), + population = scales::comma(as.numeric(population)) + ) %>% + arrange(ethnicity, ethnicity_sus_5) %>% + unite("labl", N, left_paren, percentage, right_paren, sep = "", remove = F) %>% + unite("ethnicity", ethnicity, left_paren, population, right_paren, sep = "") %>% + select(-`0`, -percentage, -N) %>% + pivot_wider(names_from = c("ethnicity_sus_5"), values_from = labl) %>% + select(-year, -country) + + my_cols <- setNames(c(codelist_name, "Asian", "Black", "Mixed", "White", "Other", "Unknown"), names(df_sus_new_cross_perc)) + + df_sus_new_cross_table <- df_sus_new_cross_perc %>% + gt(groupname_col = "") %>% + tab_spanner(label = "Primary Care ethnicity", columns = c(1)) %>% + tab_spanner(label = "Secondary Care ethnicity", columns = c(2:7)) %>% + cols_label(!!!my_cols) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 5: Count of patients with a recorded ethnicity in Secondary Care by ethnicity group (proportion of Primary Care population). All counts are rounded to the nearest 5. "), + ) %>% + tab_options( + data_row.padding = px(0) + ) + + assign(glue("df_sus_new_cross_table_{codelist}"), df_sus_new_cross_table) + + ### sankey plot + + df_secondary_new_cross_perc <- df_sus_new_cross %>% + mutate( + ethnicity = fct_relevel( + ethnicity, + "Unknown", "Other", "White", "Mixed", "Black", "Asian" + ), + ethnicity_sus_5 = fct_relevel( + ethnicity_sus_5, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + + bennett_pal <- c("#FFB700", "#F20D52", "#FF369C", "#FF7CFE", "#9C54E6", "#5323B3") + + + assign(glue("alluvial_{codelist}"), ggplot( + as.data.frame(df_secondary_new_cross_perc), + aes(y = `0`, axis1 = ethnicity, axis2 = ethnicity_sus_5) + ) + + geom_alluvium(aes(fill = ethnicity)) + + geom_stratum(aes(fill = ethnicity_sus_5)) + + # geom_text(stat = "stratum", aes(label = after_stat(stratum)), colour = "white",size = 10) + + scale_x_discrete(limits = c("ethnicity", "ethnicity_sus_5"), expand = c(.05, .05), labels = c("ethnicity" = "Primary Care ethnicity", "ethnicity_sus_5" = "Secondary Care ethnicity"), position = "top") + + scale_fill_manual(values = rev(c("#FFD23B", "#808080", "#FF7C00", "#5323B3", "#5A71F3", "#17D7E6")), na.value = NA) + + # theme_minimal() + + ggtitle("") + + theme( + axis.title.y = element_blank(), + axis.text.y = element_blank(), + axis.ticks.y = element_blank(), + axis.text.x = element_text(size = 20) + ) + + theme( + panel.background = element_rect(fill = "white"), + panel.grid.major = element_blank(), + panel.grid.minor = element_blank() + ) + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_label_repel( + stat = "stratum", + aes( + label = after_stat(stratum), + fill = after_stat(stratum) + ), + colour = "white", + size = 10, + fontface = "bold", + direction = "x", + show.legend = F + )) +} +``` + + +```{r} +df_sus_new_cross_table_new +``` + +
+ +```{r, fig.width=12, fig.height=10} +alluvial_new +``` + +
+ +```{r} +df_sus_new_cross_table_ctv3 +``` +
+ +```{r, fig.width=12, fig.height=10} +alluvial_new +``` + +
+ +## 16 Group +```{r} +for (codelist in c("new", "ctv3")) { + ifelse(codelist == "new", codelist_name <- "SNOMED:2022", codelist_name <- "CTV3:2020") + df_sus_new_cross <- read_csv(here::here("output", "sus", "simplified_output", "16_group", "tables", glue("simple_{codelist}_sus_crosstab_long_registered.csv"))) %>% + rename_with(~"ethnicity", contains("ethnicity_") & !contains("sus")) + + cols <- c("White_British", "White_Irish", "Other_White", "White_and_Black_Caribbean", "White_and_Black_African", "White_and_Asian", "Other_Mixed", "Indian", "Pakistani", "Bangladeshi", "Other_Asian", "Caribbean", "African", "Other_Black", "Chinese", "Any_other_ethnic_group") + + ethnicity_cat <- + read_csv(here::here("output", "sus", "simplified_output", "16_group", "tables", glue("simple_patient_counts_categories_16_group_{codelist}_sus_registered.csv")), col_types = (cols())) %>% + rename_with(~ sub("ethnicity_", "", .), contains("ethnicity_")) %>% + rename_with(~ sub("_new", "", .), contains("_new")) %>% + rename_with(~ sub("_ctv3", "", .), contains("_ctv3")) %>% + rename_with(~ sub("_16_filled", "", .), contains("_16_filled")) %>% + select(-contains("filled"), -contains("missing"), -contains("sus")) %>% + mutate( + White_British_anydiff = White_British_any - White_British, + White_Irish_anydiff = White_Irish_any - White_Irish, + Other_White_anydiff = Other_White_any - Other_White, + White_and_Black_Caribbean_anydiff = White_and_Black_Caribbean_any - White_and_Black_Caribbean, + White_and_Black_African_anydiff = White_and_Black_African_any - White_and_Black_African, + White_and_Asian_anydiff = White_and_Asian_any - White_and_Asian, + Other_Mixed_anydiff = Other_Mixed_any - Other_Mixed, + Indian_anydiff = Indian_any - Indian, + Pakistani_anydiff = Pakistani_any - Pakistani, + Bangladeshi_anydiff = Bangladeshi_any - Bangladeshi, + Other_Asian_anydiff = Other_Asian_any - Other_Asian, + Caribbean_anydiff = Caribbean_any - Caribbean, + African_anydiff = African_any - African, + Other_Black_anydiff = Other_Black_any - Other_Black, + Chinese_anydiff = Chinese_any - Chinese, + Any_other_ethnic_group_anydiff = Any_other_ethnic_group_any - Any_other_ethnic_group + ) + + ethnicity_cat_pivot <- ethnicity_cat %>% + pivot_longer( + cols = c(contains("_")), + names_to = c("ethnicity", "codelist"), + names_pattern = "(.*)_(.*)", + values_to = "n" + ) %>% + filter(codelist == "new", group == "all") %>% + summarise( + ethnicity, + population = n + ) %>% + bind_rows(population) + + + df_sus_new_cross_perc <- df_sus_new_cross %>% + left_join(ethnicity_cat_pivot, by = "ethnicity") %>% + mutate( + percentage = round(`0` / population * 100, 1), + ethnicity = fct_relevel( + ethnicity, + c(levels_16, "Unknown") + ), + ethnicity_sus_16 = fct_relevel( + ethnicity_sus_16, + c(levels_16, "Unknown") + ), + left_paren = " (", + right_paren = ")", + N = scales::comma(as.numeric(`0`)), + population = scales::comma(as.numeric(population)) + ) %>% + arrange(ethnicity, ethnicity_sus_16) %>% + unite("labl", N, left_paren, percentage, right_paren, sep = "", remove = F) %>% + unite("ethnicity", ethnicity, left_paren, population, right_paren, sep = "") %>% + select(-`0`, -percentage, -N) %>% + pivot_wider(names_from = c("ethnicity_sus_16"), values_from = labl) %>% + select(-year, -country) + + my_cols <- setNames(c(codelist_name, "Indian", "Pakistani", "Bangladeshi", "Other Asian", "Caribbean", "African", "Other Black", "White and Black Caribbean", "White and Black African", "White and Asian", "Other Mixed", "White British", "White Irish", "Other White", "Chinese", "Any other ethnic group", "Unknown"), names(df_sus_new_cross_perc)) + + df_sus_new_cross_table <- df_sus_new_cross_perc %>% + mutate(ethnicity = gsub("_", " ", ethnicity)) %>% + gt(groupname_col = "") %>% + tab_spanner(label = "Primary Care ethnicity", columns = c(1)) %>% + tab_spanner(label = "Secondary Care ethnicity", columns = c(2:7)) %>% + cols_label(!!!my_cols) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 5: Count of patients with a recorded ethnicity in Secondary Care by ethnicity group (proportion of Primary Care population). All counts are rounded to the nearest 5. "), + ) %>% + tab_options( + data_row.padding = px(0) + ) + + assign(glue("df_sus_new_cross_table_{codelist}"), df_sus_new_cross_table) +} +``` + +```{r} +df_sus_new_cross_table_new +``` +
+ +```{r} +df_sus_new_cross_table_ctv3 +``` +
+ + +# Comparison with the 2021 UK census population + +## 5 Group + +```{r} +ethnicity_na_2001 <- + read_csv(here::here("output", "sus", "simplified_output", "5_group", "tables", "ethnic_group_2021_registered_with_2001_categories.csv")) %>% + mutate(Ethnic_Group = fct_relevel(Ethnic_Group, "Asian", "Black", "Mixed", "White", "Other")) + +ONS_tab_2001 <- ethnicity_na_2001 %>% + mutate( + left_paren = " (", + right_paren = ")", + percentage = round(percentage, 2), + N = comma(N) + ) %>% + unite("N_perc", N, left_paren, percentage, right_paren, sep = "") %>% + select(cohort, Ethnic_Group, region, N_perc) %>% + arrange(Ethnic_Group) %>% + pivot_wider(names_from = c("Ethnic_Group", "cohort"), values_from = N_perc) %>% + mutate(region = fct_relevel(region, "England")) %>% + arrange(region) + +my_cols_ons <- setNames(c("Region", rep(c("CTV3 2020", "CTV3 2020 with SUS data", "SNOMED 2022", "SNOMED 2022 with SUS data", "2021 ONS Census*"), 5)), names(ONS_tab_2001)) + +ONS_tab_2001 %>% + gt(groupname_col = "region") %>% + tab_spanner(label = "Asian", columns = c(2:6)) %>% + tab_spanner(label = "Black", columns = c(7:11)) %>% + tab_spanner(label = "Mixed", columns = c(12:16)) %>% + tab_spanner(label = "White", columns = c(17:21)) %>% + tab_spanner(label = "Other", columns = c(22:26)) %>% + cols_label(!!!my_cols_ons) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 7: Count of patients with a recorded ethnicity in OpenSAFELY TPP by ethnicity group (proportion of registered TPP population) and 2021 ONS Census counts [amended to 2001 grouping] (proportion of 2021 ONS Census population). All counts are rounded to the nearest 5. "), + ) %>% + tab_options( + data_row.padding = px(0) + ) %>% + tab_options(., container.width = 1600) +``` + + +### England + +```{r, fig.width=24, fig.height=10} +ons_na_removed <- + read_csv(here::here("output", "sus", "simplified_output", "5_group", "tables", "ethnic_group_2021_registered_with_2001_categories.csv")) %>% + mutate( + cohort = case_when( + cohort == "ONS" ~ "2021 Census\n[amended to 2001 grouping]", + cohort == "new" ~ "SNOMED:2022", + cohort == "new_supp" ~ "SNOMED:2022with secondary care data", + cohort == "ctv3" ~ "CTV3:2020", + cohort == "ctv3_supp" ~ "CTV3:2020 with secondary care data" + ), + cohort = fct_relevel(cohort, "2021 Census\n[amended to 2001 grouping]", "SNOMED:2022", "SNOMED:2022 with secondary care data", "CTV3:2020", "CTV3:2020 with secondary care data"), + Ethnic_Group = fct_relevel( + Ethnic_Group, + "Asian", "Black", "Mixed", "White", "Other" + ) + ) + + +## create difference in percentage between ONS and TPP (for plotting) +ons_ethnicity_plot_na_diff <- ons_na_removed %>% + group_by(Ethnic_Group, region, group) %>% + arrange(cohort) %>% + mutate(diff = percentage - first(percentage)) %>% + select(region, Ethnic_Group, cohort, diff, group) + +ons_na_removed <- ons_na_removed %>% + left_join(ons_ethnicity_plot_na_diff, by = c("region", "Ethnic_Group", "cohort", "group")) + +ons_ethnicity_plot_eng_na <- ons_na_removed %>% + filter(region == "England", group == "5") %>% + ggplot(aes(x = Ethnic_Group, y = percentage, fill = cohort)) + + geom_bar(stat = "identity", position = "dodge") + + theme_classic() + + theme(text = element_text(size = 20)) + + theme(axis.text.x = element_text( + size = 20, + hjust = 0, + vjust = 0 + )) + + coord_flip() + + scale_fill_manual(values = bennett_pal[c(1, 2:5)]) + + xlab("") + + ylab("\nProportion of ethnicities") + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_text(aes(x = Ethnic_Group, y = percentage, label = ifelse(cohort == "2021 Census\n[amended to 2001 grouping]", "", paste0(round(diff, digits = 1), "%"))), size = 3.4, position = position_dodge(width = 0.9), vjust = 0.3, hjust = -0.2) + +ons_ethnicity_plot_eng_na +``` + +### Region + +```{r, fig.width=20, fig.height=15} +## 5 group ethnicity plot NA removed for Regions +ons_ethnicity_plot_na <- ons_na_removed %>% + filter(region != "England", group == "5") %>% + ggplot(aes(x = Ethnic_Group, y = percentage, fill = cohort)) + + geom_bar(stat = "identity", position = "dodge") + + facet_wrap(~region) + + theme_classic() + + theme(text = element_text(size = 20)) + + theme(axis.text.x = element_text( + size = 12, + hjust = 0.75, + vjust = 0 + )) + + coord_flip() + + scale_fill_manual(values = bennett_pal[c(1, 2:5)]) + + xlab("") + + ylab("\nProportion of ethnicities") + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_text(aes(x = Ethnic_Group, y = percentage, label = ifelse(cohort == "2021 Census\n[amended to 2001 grouping]", "", paste0(round(diff, digits = 1), "%"))), size = 3.4, position = position_dodge(width = 0.9), vjust = 0.3, hjust = -0.2) + +ons_ethnicity_plot_na +``` + +## 16 Group + +```{r} +ethnicity_na_2001 <- + read_csv(here::here("output", "sus", "simplified_output", "16_group", "tables", "ethnic_group_2021_registered_with_2001_categories.csv")) %>% + mutate( + Ethnic_Group = gsub(" ", "_", Ethnic_Group), + Ethnic_Group = fct_relevel(Ethnic_Group, "Indian", "Pakistani", "Bangladeshi", "Other_Asian", "Caribbean", "African", "Other_Black", "White_and_Black_Caribbean", "White_and_Black_African", "White_and_Asian", "Other_Mixed", "White_British", "White_Irish", "Other_White", "Chinese", "Any_other_ethnic_group") + ) + +ONS_tab_2001 <- ethnicity_na_2001 %>% + mutate( + left_paren = " (", + right_paren = ")", + percentage = round(percentage, 2), + N = comma(N) + ) %>% + unite("N_perc", N, left_paren, percentage, right_paren, sep = "") %>% + select(cohort, Ethnic_Group, region, N_perc) %>% + arrange(Ethnic_Group) %>% + pivot_wider(names_from = c("Ethnic_Group", "cohort"), values_from = N_perc) %>% + mutate(region = fct_relevel(region, "England")) %>% + arrange(region) + +my_cols_ons <- setNames(c("Region", rep(c("CTV3 2020", "CTV3 2020 with SUS data", "SNOMED 2022", "SNOMED 2022 with SUS data", "2021 ONS Census*"), 16)), names(ONS_tab_2001)) + +ONS_tab_2001 %>% + gt(groupname_col = "region") %>% + tab_spanner(label = "Indian", columns = c(2:6)) %>% + tab_spanner(label = "Pakistani", columns = c(7:11)) %>% + tab_spanner(label = "Bangladeshi", columns = c(12:16)) %>% + tab_spanner(label = "Other Asian", columns = c(17:21)) %>% + tab_spanner(label = "Caribbean", columns = c(22:26)) %>% + tab_spanner(label = "African", columns = c(27:31)) %>% + tab_spanner(label = "Other Black", columns = c(32:36)) %>% + tab_spanner(label = "White and Black Caribbean", columns = c(37:41)) %>% + tab_spanner(label = "White and Black African", columns = c(42:46)) %>% + tab_spanner(label = "White and Asian", columns = c(47:51)) %>% + tab_spanner(label = "Other Mixed", columns = c(52:56)) %>% + tab_spanner(label = "White British", columns = c(57:61)) %>% + tab_spanner(label = "White Irish", columns = c(62:66)) %>% + tab_spanner(label = "Other White", columns = c(67:71)) %>% + tab_spanner(label = "Chinese", columns = c(72:76)) %>% + tab_spanner(label = "Any other ethnic group", columns = c(77:81)) %>% + cols_label(!!!my_cols_ons) %>% + tab_style( + style = list( + cell_fill(color = "gray96") + ), + locations = cells_body() + ) %>% + tab_style( + style = list( + cell_text(weight = "bold") + ), + locations = cells_column_labels(everything()) + ) %>% + tab_options( + table.align = "left", + # row_group.as_column = TRUE option not available on the OS R image + table.font.size = 8, + column_labels.border.top.width = px(3), + column_labels.border.top.color = "transparent", + table.border.top.color = "transparent", + heading.align = "left" + ) %>% + tab_header( + title = md("Table 7: Count of patients with a recorded ethnicity in OpenSAFELY TPP by ethnicity group (proportion of registered TPP population) and 2021 ONS Census counts [amended to 2001 grouping] (proportion of 2021 ONS Census population). All counts are rounded to the nearest 5. "), + ) %>% + tab_options( + data_row.padding = px(0) + ) %>% + tab_options(., container.width = 3200) +``` + + +### England + +```{r, fig.width=24, fig.height=20} +ons_na_removed <- + read_csv(here::here("output", "sus", "simplified_output", "16_group", "tables", "ethnic_group_2021_registered_with_2001_categories.csv")) %>% + mutate( + cohort = case_when( + cohort == "ONS" ~ "2021 Census\n[amended to 2001 grouping]", + cohort == "new" ~ "SNOMED:2022", + cohort == "new_supp" ~ "SNOMED:2022 with secondary care data", + cohort == "ctv3" ~ "CTV3:2020", + cohort == "ctv3_supp" ~ "CTV3:2020 with secondary care data" + ), + cohort = fct_relevel(cohort, "2021 Census\n[amended to 2001 grouping]", "SNOMED:2022", "SNOMED:2022 with secondary care data", "CTV3:2020", "CTV3:2020 with secondary care data"), + Ethnic_Group = gsub("_", " ", Ethnic_Group), + Ethnic_Group = fct_relevel( + Ethnic_Group, "Indian", "Pakistani", "Bangladeshi", "Other Asian", "Caribbean", "African", "Other Black", "White and Black Caribbean", "White and Black African", "White and Asian", "Other Mixed", "White British", "White Irish", "Other White", "Chinese", "Any other ethnic group" + ) + ) + + +## create difference in percentage between ONS and TPP (for plotting) +ons_ethnicity_plot_na_diff <- ons_na_removed %>% + group_by(Ethnic_Group, region, group) %>% + arrange(cohort) %>% + mutate(diff = percentage - first(percentage)) %>% + select(region, Ethnic_Group, cohort, diff, group) + +ons_na_removed <- ons_na_removed %>% + left_join(ons_ethnicity_plot_na_diff, by = c("region", "Ethnic_Group", "cohort", "group")) + +ons_ethnicity_plot_eng_na <- ons_na_removed %>% + filter(region == "England", group == "16") %>% + ggplot(aes(x = Ethnic_Group, y = percentage, fill = cohort)) + + geom_bar(stat = "identity", position = "dodge") + + theme_classic() + + theme(text = element_text(size = 20)) + + theme(axis.text.x = element_text( + size = 20, + hjust = 0, + vjust = 0 + )) + + coord_flip() + + scale_fill_manual(values = bennett_pal[c(1, 2:5)]) + + xlab("") + + ylab("\nProportion of ethnicities") + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_text(aes(x = Ethnic_Group, y = percentage, label = ifelse(cohort == "2021 Census\n[amended to 2001 grouping]", "", paste0(round(diff, digits = 1), "%"))), size = 3.4, position = position_dodge(width = 0.9), vjust = 0.3, hjust = -0.2) + +ons_ethnicity_plot_eng_na +``` + + +### Region + +```{r, fig.width=25, fig.height=20} +## 16 group ethnicity plot NA removed for Regions +ons_ethnicity_plot_na <- ons_na_removed %>% + filter(region != "England", group == "16") %>% + ggplot(aes(x = Ethnic_Group, y = percentage, fill = cohort)) + + geom_bar(stat = "identity", position = "dodge") + + facet_wrap(~region) + + theme_classic() + + theme(text = element_text(size = 20)) + + theme(axis.text.x = element_text( + size = 12, + hjust = 0.75, + vjust = 0 + )) + + coord_flip() + + scale_fill_manual(values = bennett_pal[c(1, 2:5)]) + + xlab("") + + ylab("\nProportion of ethnicities") + + theme( + legend.position = "bottom", + legend.title = element_blank() + ) + + geom_text(aes(x = Ethnic_Group, y = percentage, label = ifelse(cohort == "2021 Census\n[amended to 2001 grouping]", "", paste0(round(diff, digits = 1), "%"))), size = 3.4, position = position_dodge(width = 0.9), vjust = 0.3, hjust = -0.2) + +ons_ethnicity_plot_na +``` + + + +# Discussion + +This study has shown that primary care ethnicity data made available via OpenSAFELY is complete for around three quarters of all patients. However, recording ethnicity is not straightforward. Indeed, despite often being used as a key variable to describe health, the idea of "ethnicity" has been disputed. Self-identified ethnicity is not a fixed concept and evolving socio-cultural trends could contribute to changes in a person's self-identified ethnic group, particularly for those with mixed heritage. It is therefore perhaps not surprising to see lower levels of concordance between latest ethnicity and most common ethnicity in those with latest ethnicity grouped as mixed. + +In OpenSAFELY ethnicity in primary care was originally grouped using the CTV3:2020 codelist. However, this codelist does not strictly follow the grouping of the 2001 Census, which is the NHS standard for ethnicity. The common practice of supplementing CTV3:2020 coded ethnicity with SUS data has been shown to provide ethnicity data for 90.6% of patients, however could lead to inconsistent classification as SUS data follow the 2001 census groups. + +We believe that the SNOMED:2022 codelist provides a more consistent representation of ethnicity as defined by the 2001 census groups and should be the preferred codelist for primary care ethnicity. + +# Limitations + +It is common for OpenSAFELY studies to supplement the primary care recorded ethnicity, where missing, with ethnicity data from the Secondary Uses Service (SUS). This study has focussed solely on the primary care recorded ethnicity. Due to the way that non-native data, such as GP2GP data and historical data, are imported into TPP the date of ethnicity recorded is not always available therefore chronology is unreliable for ethnicity data. + +# Conclusion + +This report describes existing methods to derive primary care ethnicity in OpenSAFELY-TPP and suggests the adoption of the SNOMED:2022 codelist as the new standard method. It is a living document that can be periodically re-run to evaluate the most current best practices for research. If you have improvements or forks, please contact the OpenSAFELY data team. + +# Technical details + +This notebook was run on 2023-02-16. The information below is based on data extracted from the OpenSAFELY-TPP database on 2023-02-16. + +If a clinical code appears in the primary care record on multiple dates, the latest date is used. + +Only patients registered at their practice on January 1 2022 are included. \ No newline at end of file diff --git a/project.yaml b/project.yaml index d905c09..77d74a0 100644 --- a/project.yaml +++ b/project.yaml @@ -1,3 +1,5 @@ +### CTV3, PRIMIS, SNOMED analysis + version: '3.0' expectations: @@ -5,87 +7,926 @@ expectations: actions: split_codelist: - run: stata-mp:latest analysis/00_trim_snomed_codelist.do - outputs: - highly_sensitive: - data1: codelists/group1.csv - data2: codelists/group2.csv - data3: codelists/group3.csv - data4: codelists/group4.csv - data5: codelists/group5.csv - data6: codelists/group6.csv - data7: codelists/group7.csv - data8: codelists/group8.csv - data9: codelists/group9.csv - data10: codelists/group10.csv + run: r:latest analysis/00_trim_snomed_codelist.r + outputs: + highly_sensitive: + data: codelists/ethnicity_*.csv + + generate_study_population_5: + run: cohortextractor:latest generate_cohort --study-definition study_definition_5 --output-file output/extract_5/input_5.feather --output-format feather + needs: [split_codelist] + outputs: + highly_sensitive: + cohort: output/extract_5/input_5.feather + + # dataset report from reusable action https://github.com/opensafely-actions/dataset-report + generate_dataset_report_5: + run: > + dataset-report:v0.0.9 + --input-files output/extract_5/input_5.feather + --output-dir output/extract_5 + needs: [generate_study_population_5] + outputs: + moderately_sensitive: + dataset_report: output/extract_5/input_5.html + + generate_study_population_16: + run: cohortextractor:latest generate_cohort --study-definition study_definition_16 --output-file output/extract_16/input_16.feather --output-format feather + needs: [split_codelist] + outputs: + highly_sensitive: + cohort: output/extract_16/input_16.feather + + # dataset report from reusable action https://github.com/opensafely-actions/dataset-report + generate_dataset_report_16: + run: > + dataset-report:v0.0.9 + --input-files output/extract_16/input_16.feather + --output-dir output/extract_16 + needs: [generate_study_population_16] + outputs: + moderately_sensitive: + dataset_report: output/extract_16/input_16.html + + generate_study_population_time: + run: cohortextractor:latest generate_cohort --study-definition study_definition_time --output-file output/extract_time/input_time.feather --output-format feather + needs: [split_codelist] + outputs: + highly_sensitive: + cohort: output/extract_time/input_time.feather + + # dataset report from reusable action https://github.com/opensafely-actions/dataset-report + generate_dataset_report_time: + run: > + dataset-report:v0.0.9 + --input-files output/extract_time/input_time.feather + --output-dir output/extract_time + needs: [generate_study_population_time] + outputs: + moderately_sensitive: + dataset_report: output/extract_time/input_time.html + + execute_simple_validation_analyses: + run: python:latest python analysis/simple_validation_script.py + needs: [generate_study_population_5] + outputs: + moderately_sensitive: + tables: output/simplified_output/5_group/tables/*.csv + + execute_simple_validation_analyses_16: + run: python:latest python analysis/simple_validation_script_16.py + needs: [generate_study_population_16] + outputs: + moderately_sensitive: + tables: output/simplified_output/16_group/tables/simpl*.csv + + +######## SUS + execute_simple_validation_analyses_sus: + run: python:latest python analysis/sus/simple_validation_script_sus.py + needs: [generate_study_population_5] + outputs: + moderately_sensitive: + tables: output/sus/simplified_output/5_group/tables/*.csv +# figures: output/sus/simplified_output/5_group/figures/*.png + + + execute_simple_validation_analyses_16_sus: + run: python:latest python analysis/sus/simple_validation_script_16_sus.py + needs: [generate_study_population_16] + outputs: + moderately_sensitive: + tables: output/sus/simplified_output/16_group/tables/simpl*.csv + + +################## over time + + time_tables: + run: r:latest analysis/time/times.R + needs: [generate_study_population_time] + outputs: moderately_sensitive: - log: logs/00_trim_snomed_codelist.log + data: output/time/*.csv + plots: output/time/*.png + + monthly_ethnicity_nulldates_1990: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '1990-01-01 to 1990-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnicities_measures_years*.feather + + monthly_ethnicity_nulldates_1991: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '1991-01-01 to 1991-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnicities_measures_year*.feather + + monthly_ethnicity_nulldates_1992: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '1992-01-01 to 1992-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnicities_measures_yea*.feather + + monthly_ethnicity_nulldates_1993: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '1993-01-01 to 1993-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnicities_measures_ye*.feather + + monthly_ethnicity_nulldates_1994: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '1994-01-01 to 1994-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnicities_measures_y*.feather + + monthly_ethnicity_nulldates_1995: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '1995-01-01 to 1995-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnicities_measures_*.feather - generate_cohort1: - run: cohortextractor:latest generate_cohort --study-definition study_definition + monthly_ethnicity_nulldates_1996: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '1996-01-01 to 1996-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather outputs: highly_sensitive: - cohort: output/input.csv + extract: output/yearly/nulldates/input_nulldates_ethnicities_measures*.feather - generate_cohort2: - run: cohortextractor:latest generate_cohort --study-definition study_definition_2 + monthly_ethnicity_nulldates_1997: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '1997-01-01 to 1997-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather outputs: highly_sensitive: - cohort: output/input_2.csv - - generate_cohort3: - run: cohortextractor:latest generate_cohort --study-definition study_definition_3 + extract: output/yearly/nulldates/input_nulldates_ethnicities_measure*.feather + + monthly_ethnicity_nulldates_1998: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '1998-01-01 to 1998-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnicities_measur*.feather + + monthly_ethnicity_nulldates_1999: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '1999-01-01 to 1999-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnicities_measu*.feather + + monthly_ethnicity_nulldates_2000: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2000-01-01 to 2000-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather outputs: highly_sensitive: - cohort: output/input_3.csv + extract: output/yearly/nulldates/input_nulldates_ethnicities_meas*.feather - generate_cohort4: - run: cohortextractor:latest generate_cohort --study-definition study_definition_4 + monthly_ethnicity_nulldates_2001: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2001-01-01 to 2001-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather outputs: highly_sensitive: - cohort: output/input_4.csv + extract: output/yearly/nulldates/input_nulldates_ethnicities_mea*.feather - generate_cohort5: - run: cohortextractor:latest generate_cohort --study-definition study_definition_5 + monthly_ethnicity_nulldates_2002: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2002-01-01 to 2002-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather outputs: highly_sensitive: - cohort: output/input_5.csv + extract: output/yearly/nulldates/input_nulldates_ethnicities_me*.feather - generate_cohort6: - run: cohortextractor:latest generate_cohort --study-definition study_definition_6 + monthly_ethnicity_nulldates_2003: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2003-01-01 to 2003-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather outputs: highly_sensitive: - cohort: output/input_6.csv + extract: output/yearly/nulldates/input_nulldates_ethnicities_m*.feather - generate_cohort7: - run: cohortextractor:latest generate_cohort --study-definition study_definition_7 + monthly_ethnicity_nulldates_2004: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2004-01-01 to 2004-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather outputs: highly_sensitive: - cohort: output/input_7.csv + extract: output/yearly/nulldates/input_nulldates_ethnicities_*.feather - generate_cohort8: - run: cohortextractor:latest generate_cohort --study-definition study_definition_8 + monthly_ethnicity_nulldates_2005: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2005-01-01 to 2005-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather outputs: highly_sensitive: - cohort: output/input_8.csv + extract: output/yearly/nulldates/input_nulldates_ethnicities*.feather - generate_cohort9: - run: cohortextractor:latest generate_cohort --study-definition study_definition_9 + monthly_ethnicity_nulldates_2006: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2006-01-01 to 2006-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather outputs: highly_sensitive: - cohort: output/input_9.csv + extract: output/yearly/nulldates/input_nulldates_ethnicitie*.feather - generate_cohort10: - run: cohortextractor:latest generate_cohort --study-definition study_definition_10 + monthly_ethnicity_nulldates_2007: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2007-01-01 to 2007-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather outputs: highly_sensitive: - cohort: output/input_10.csv + extract: output/yearly/nulldates/input_nulldates_ethniciti*.feather - initial_counts: - run: stata-mp:latest analysis/01_describe_snomed_ethnicity.do - needs: [generate_cohort1, generate_cohort2, generate_cohort3, generate_cohort4, generate_cohort5, generate_cohort6, generate_cohort7, generate_cohort8, generate_cohort9, generate_cohort10] - outputs: + monthly_ethnicity_nulldates_2008: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2008-01-01 to 2008-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnicit*.feather + + monthly_ethnicity_nulldates_2009: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2009-01-01 to 2009-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnici*.feather + + monthly_ethnicity_nulldates_2010: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2010-01-01 to 2010-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethnic*.feather + + monthly_ethnicity_nulldates_2011: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2011-01-01 to 2011-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethni*.feather + + monthly_ethnicity_nulldates_2012: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2012-01-01 to 2012-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_ethn*.feather + + monthly_ethnicity_nulldates_2013: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2013-01-01 to 2013-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_eth*.feather + + monthly_ethnicity_nulldates_2014: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2014-01-01 to 2014-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_et*.feather + + monthly_ethnicity_nulldates_2015: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2015-01-01 to 2015-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_e*.feather + + monthly_ethnicity_nulldates_2016: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2016-01-01 to 2016-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates_*.feather + + monthly_ethnicity_nulldates_2017: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2017-01-01 to 2017-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldates*.feather + + monthly_ethnicity_nulldates_2018: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2018-01-01 to 2018-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldate*.feather + + monthly_ethnicity_nulldates_2019: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2019-01-01 to 2019-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulldat*.feather + + monthly_ethnicity_nulldates_2020: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2020-01-01 to 2020-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nullda*.feather + + monthly_ethnicity_nulldates_2021: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2021-01-01 to 2021-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nulld*.feather + + monthly_ethnicity_nulldates_2022: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2022-01-01 to 2022-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_null*.feather + + monthly_ethnicity_nulldates_2023: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2023-01-01 to 2023-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nul*.feather + + monthly_ethnicity_nulldates_2024: + run: cohortextractor:latest generate_cohort --study-definition study_definition_nulldates_ethnicities_measures_years + --index-date-range '2024-01-01 to 2024-01-01 by month' --output-dir=output/yearly/nulldates + --output-format=feather + outputs: + highly_sensitive: + extract: output/yearly/nulldates/input_nu*.feather + + monthly_nulldates_measures: + run: cohortextractor:latest generate_measures --study-definition study_definition_nulldates_ethnicities_measures_years --output-dir=output/yearly/nulldates + needs: + - monthly_ethnicity_nulldates_1990 + - monthly_ethnicity_nulldates_1991 + - monthly_ethnicity_nulldates_1992 + - monthly_ethnicity_nulldates_1993 + - monthly_ethnicity_nulldates_1994 + - monthly_ethnicity_nulldates_1995 + - monthly_ethnicity_nulldates_1996 + - monthly_ethnicity_nulldates_1997 + - monthly_ethnicity_nulldates_1998 + - monthly_ethnicity_nulldates_1999 + - monthly_ethnicity_nulldates_2000 + - monthly_ethnicity_nulldates_2001 + - monthly_ethnicity_nulldates_2002 + - monthly_ethnicity_nulldates_2003 + - monthly_ethnicity_nulldates_2004 + - monthly_ethnicity_nulldates_2005 + - monthly_ethnicity_nulldates_2006 + - monthly_ethnicity_nulldates_2007 + - monthly_ethnicity_nulldates_2008 + - monthly_ethnicity_nulldates_2009 + - monthly_ethnicity_nulldates_2010 + - monthly_ethnicity_nulldates_2011 + - monthly_ethnicity_nulldates_2012 + - monthly_ethnicity_nulldates_2013 + - monthly_ethnicity_nulldates_2014 + - monthly_ethnicity_nulldates_2015 + - monthly_ethnicity_nulldates_2016 + - monthly_ethnicity_nulldates_2017 + - monthly_ethnicity_nulldates_2018 + - monthly_ethnicity_nulldates_2019 + - monthly_ethnicity_nulldates_2020 + - monthly_ethnicity_nulldates_2021 + - monthly_ethnicity_nulldates_2022 + - monthly_ethnicity_nulldates_2023 + - monthly_ethnicity_nulldates_2024 + outputs: moderately_sensitive: - log: logs/01_describe_snomed_ethnicity.log - table: output/snomed_ethnicity_counts.csv + measure_csv: output/yearly/nulldates/measure_*.csv + +#### Yearly ethnicities + monthly_ethnicity_1990: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '1990-01-01 to 1990-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_measures_years*.feather + + monthly_ethnicity_1991: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '1991-01-01 to 1991-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_measures_year*.feather + + monthly_ethnicity_1992: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '1992-01-01 to 1992-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_measures_yea*.feather + + + monthly_ethnicity_1993: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '1993-01-01 to 1993-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_measures_ye*.feather + + monthly_ethnicity_1994: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '1994-01-01 to 1994-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_measures_y*.feather + + + monthly_ethnicity_1995: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '1995-01-01 to 1995-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_measures_*.feather + + + monthly_ethnicity_1996: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '1996-01-01 to 1996-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_measures*.feather + + + monthly_ethnicity_1997: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '1997-01-01 to 1997-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_measure*.feather + + + monthly_ethnicity_1998: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '1998-01-01 to 1998-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_measur*.feather + + + monthly_ethnicity_1999: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '1999-01-01 to 1999-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_measu*.feather + + + monthly_ethnicity_2000: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2000-01-01 to 2000-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_meas*.feather + + + monthly_ethnicity_2001: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2001-01-01 to 2001-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_mea*.feather + + + monthly_ethnicity_2002: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2002-01-01 to 2002-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_me*.feather + + + + monthly_ethnicity_2003: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2003-01-01 to 2003-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_m*.feather + + + + monthly_ethnicity_2004: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2004-01-01 to 2004-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities_*.feather + + + + monthly_ethnicity_2005: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2005-01-01 to 2005-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicities*.feather + + monthly_ethnicity_2006: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2006-01-01 to 2006-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicitie*.feather + + + + monthly_ethnicity_2007: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2007-01-01 to 2007-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethniciti*.feather + + + + monthly_ethnicity_2008: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2008-01-01 to 2008-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnicit*.feather + + monthly_ethnicity_2009: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2009-01-01 to 2009-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnici*.feather + + monthly_ethnicity_2010: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2010-01-01 to 2010-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethnic*.feather + + + + monthly_ethnicity_2011: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2011-01-01 to 2011-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethni*.feather + + + + monthly_ethnicity_2012: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2012-01-01 to 2012-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_ethn*.feather + + + + monthly_ethnicity_2013: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2013-01-01 to 2013-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_eth*.feather + + + + monthly_ethnicity_2014: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2014-01-01 to 2014-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_et*.feather + + + + monthly_ethnicity_2015: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2015-01-01 to 2015-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_e*.feather + + + monthly_ethnicity_2016: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2016-01-01 to 2016-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly_*.feather + + + monthly_ethnicity_2017: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2017-01-01 to 2017-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthly*.feather + + monthly_ethnicity_2018: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2018-01-01 to 2018-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_monthl*.feather + + monthly_ethnicity_2019: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2019-01-01 to 2019-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_month*.feather + + monthly_ethnicity_2020: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2020-01-01 to 2020-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_mont*.feather + + monthly_ethnicity_2021: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2021-01-01 to 2021-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_mon*.feather + + monthly_ethnicity_2022: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2022-01-01 to 2022-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_mo*.feather + + monthly_ethnicity_2023: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2023-01-01 to 2023-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_m*.feather + + + monthly_ethnicity_2024: + run: cohortextractor:latest generate_cohort --study-definition study_definition_monthly_ethnicities_measures_years + --index-date-range '2024-01-01 to 2024-01-01 by month' --output-dir=output/yearly + --output-format=feather + needs: + - split_codelist + outputs: + highly_sensitive: + extract: output/yearly/input_*.feather + + monthly_ethnicity_measures: + run: cohortextractor:latest generate_measures --study-definition study_definition_monthly_ethnicities_measures_years --output-dir=output/yearly + needs: + - monthly_ethnicity_1990 + - monthly_ethnicity_1991 + - monthly_ethnicity_1992 + - monthly_ethnicity_1993 + - monthly_ethnicity_1994 + - monthly_ethnicity_1995 + - monthly_ethnicity_1996 + - monthly_ethnicity_1997 + - monthly_ethnicity_1998 + - monthly_ethnicity_1999 + - monthly_ethnicity_2000 + - monthly_ethnicity_2001 + - monthly_ethnicity_2002 + - monthly_ethnicity_2003 + - monthly_ethnicity_2004 + - monthly_ethnicity_2005 + - monthly_ethnicity_2006 + - monthly_ethnicity_2007 + - monthly_ethnicity_2008 + - monthly_ethnicity_2009 + - monthly_ethnicity_2010 + - monthly_ethnicity_2011 + - monthly_ethnicity_2012 + - monthly_ethnicity_2013 + - monthly_ethnicity_2014 + - monthly_ethnicity_2015 + - monthly_ethnicity_2016 + - monthly_ethnicity_2017 + - monthly_ethnicity_2018 + - monthly_ethnicity_2019 + - monthly_ethnicity_2020 + - monthly_ethnicity_2021 + - monthly_ethnicity_2022 + - monthly_ethnicity_2023 + - monthly_ethnicity_2024 + - split_codelist + outputs: + moderately_sensitive: + measure_csv: output/yearly/measure_*.csv + + time_rate_plots: + run: r:latest analysis/time/time_covariate_plots.R + needs: + - monthly_ethnicity_measures + - monthly_nulldates_measures + outputs: + moderately_sensitive: + data: output/time/*rate.csv + plots: output/time/*rate.png + + report_tables: + run: python:latest python analysis/report_tables.py + needs: [execute_simple_validation_analyses_16_sus, execute_simple_validation_analyses_sus,execute_simple_validation_analyses,execute_simple_validation_analyses_16] + outputs: + moderately_sensitive: + tables: output/report_tables/*.csv + + generate_ons_comparisons: + run: r:latest analysis/sus/combine_ons_sus.R + needs: [execute_simple_validation_analyses_16_sus,execute_simple_validation_analyses_sus] + outputs: + moderately_sensitive: + csvs: output/sus/simplified_output/*/tables/ethnic_group*.csv + +##### draft report + generate_draft_report_rmd: + run: r:latest -e 'rmarkdown::render("notebooks_r/report.Rmd", knit_root_dir = "/workspace", output_dir="/workspace/output/report")' + needs: [generate_ons_comparisons,report_tables, execute_simple_validation_analyses,execute_simple_validation_analyses_16,execute_simple_validation_analyses_sus,execute_simple_validation_analyses_16_sus] + outputs: + moderately_sensitive: + html: output/report/report.html + +#### move released files to output/released +###### run locally for manuscript +##### local notebook + generate_local_runs: + run: python:latest jupyter nbconvert /workspace/notebooks_jupyter/local_runs.ipynb --execute --to html --template basic --output-dir=/workspace/output --ExecutePreprocessor.timeout=86400 --no-input + needs: [execute_simple_validation_analyses,execute_simple_validation_analyses_16] + outputs: + moderately_sensitive: + csvs: output/released/made_locally/*.csv + + # process_ons_census_data: + # run: r:latest analysis/local/ons_process.R + # outputs: + # moderately_sensitive: + # csvs: data/*.csv.gz + + # generate_local_ons_comparisons: + # run: r:latest analysis/local/combine_ons_sus.R + # needs: [process_ons_census_data] + # outputs: + # moderately_sensitive: + # csvs: output/released/made_locally/ethnic_group*.csv + # tests: output/tests/*.csv + +## create outputs for the manuscript + ## library(hrbrthemes) not currently available on the OS R image + # generate_manuscript_plots: + # run: r:latest analysis/local/local_manuscript_plots.R + # outputs: + # moderately_sensitive: + # plots: output/released/made_locally/*.png +## create outputs for the appendix +# `row_group.as_column = TRUE` option not currently available on the OS R image + # generate_appendix: + # run: r:latest analysis/local/appendix.R + # needs: [generate_local_runs] + # outputs: + # moderately_sensitive: + # html: output/released/made_locally/*.html + # pdf: output/released/made_locally/*.pdf \ No newline at end of file