diff --git a/src/gentroutils/commands/update_gwas_curation_metadata.py b/src/gentroutils/commands/update_gwas_curation_metadata.py index 5d8cc32..8bb42bd 100644 --- a/src/gentroutils/commands/update_gwas_curation_metadata.py +++ b/src/gentroutils/commands/update_gwas_curation_metadata.py @@ -21,27 +21,15 @@ CURATED_INPUTS = ( ( "ftp://ftp.ebi.ac.uk/pub/databases/gwas/releases/latest/gwas-catalog-associations_ontology-annotated.tsv", - "gs://gwas_catalog_data/curated_inputs/gwas_catalog_associations_ontology_annotated.tsv", + "gs://gwas_catalog_inputs/gwas_catalog_associations_ontology_annotated.tsv", ), ( "ftp://ftp.ebi.ac.uk/pub/databases/gwas/releases/latest/gwas-catalog-download-studies-v1.0.3.1.txt", - "gs://gwas_catalog_data/curated_inputs/gwas_catalog_download_studies.tsv", - ), - ( - "ftp://ftp.ebi.ac.uk/pub/databases/gwas/releases/latest/gwas-catalog-unpublished-studies-v1.0.3.1.tsv", - "gs://gwas_catalog_data/curated_inputs/gwas_catalog_unpublished_studies.tsv", + "gs://gwas_catalog_inputs/gwas_catalog_download_studies.tsv", ), ( "ftp://ftp.ebi.ac.uk/pub/databases/gwas/releases/latest/gwas-catalog-download-ancestries-v1.0.3.1.txt", - "gs://gwas_catalog_data/curated_inputs/gwas_catalog_download_ancestries.tsv", - ), - ( - "ftp://ftp.ebi.ac.uk/pub/databases/gwas/releases/latest/gwas-catalog-unpublished-ancestries-v1.0.3.1.tsv", - "gs://gwas_catalog_data/curated_inputs/gwas_catalog_unpublished_ancestries.tsv", - ), - ( - "ftp://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/harmonised_list.txt", - "gs://gwas_catalog_data/curated_inputs/harmonised_list.txt", + "gs://gwas_catalog_inputs/gwas_catalog_download_ancestries.tsv", ), )