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@GriffithsLab KCNI Whole Brain Modelling Group

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    35 repositories

    • BastiaensAlphaModels_NeuroLibre

      Public
      NeuroLibre version of Bastiaens et al. paper "A comprehensive investigation of intracortical and corticothalamic models of the alpha rhythm"
      Jupyter Notebook
      •
      MIT License
      •3•0•0•1•Updated Dec 13, 2024Dec 13, 2024

    • neurolibre_template_test

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •5•0•0•1•Updated Dec 11, 2024Dec 11, 2024

    • griffithslab-website

      Public
      TeX
      •1•0•1•0•Updated Sep 23, 2024Sep 23, 2024

    • Momi_et_al_2024

      Public
      Jupyter Notebook
      •1•1•0•0•Updated Aug 22, 2024Aug 22, 2024

    • whobpyt

      Public
      Whole-Brain Modelling in PyTorch
      Python
      •
      MIT License
      •24•27•22•18•Updated Aug 8, 2024Aug 8, 2024

    • SynPy

      Public
      Python wrapper for interfacing with NFTsim; designed for modelling CT plasticity dynamics
      Jupyter Notebook
      •0•0•0•0•Updated Jul 22, 2024Jul 22, 2024

    • FieldsInstitute_MathNeuro

      Public
      Alt website source for 2025 Fields Institute Thematic Program in Mathematics of Neuroscience
      TeX
      •1•0•3•0•Updated Jul 18, 2024Jul 18, 2024

    • HaritaEtAl2024_whobpyt-network-sc-lesions

      Public
      Harita et al., 2024: State-dependent relationship between lower and higher order networks in fMRI brain dynamics
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated Jun 25, 2024Jun 25, 2024

    • mne-python

      Public
      MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1.4k•0•0•0•Updated Jun 21, 2024Jun 21, 2024

    • OHBM2024-educational-course

      Public
      1•0•0•0•Updated Jun 14, 2024Jun 14, 2024

    • HaritaEtAl2024_tvb-negative-correlations

      Public
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated Apr 22, 2024Apr 22, 2024

    • Bastiaens2024_AlphaModels

      Public
      Jupyter Notebook
      •
      MIT License
      •3•1•0•0•Updated Apr 22, 2024Apr 22, 2024

    • MorshedzadehEtAl2024_sleep-eeg-nft

      Public
      Repository for the code supporting Morshedzadeh et al. (2024) - Corticothalamic modelling of sleep neurophysiology with applications to mobile EEG
      MIT License
      •0•0•0•0•Updated Apr 20, 2024Apr 20, 2024

    • mne-python_zatdfnirs

      Public archive
      MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1.4k•0•0•0•Updated Apr 2, 2024Apr 2, 2024

    • HaritaEtAl2022_tms-efield-fc

      Public
      Mapping connectivity of TMS target sites for major depression (Harita et al. Front Psych 2022)
      Jupyter Notebook
      •3•0•0•0•Updated Mar 18, 2024Mar 18, 2024

    • whobpyt-data

      Public
      0•0•0•0•Updated Mar 13, 2024Mar 13, 2024

    • dl-paramest-for-neurophys-models

      Public
      Jupyter Notebook
      •
      MIT License
      •4•9•0•1•Updated Jan 17, 2024Jan 17, 2024

    • OHBM2023-educational-course

      Public
      SCSS
      •
      MIT License
      •2•0•0•0•Updated Jul 18, 2023Jul 18, 2023

    • OHBM-whole-brain-modelling-course

      Public
      SCSS
      •
      MIT License
      •2•4•0•0•Updated Jul 18, 2023Jul 18, 2023

    • OHBM-educational-course

      Public
      Python
      •0•0•4•0•Updated Jun 16, 2023Jun 16, 2023

    • PyTepFit

      Public
      Whole-brain modelling of TMS-EEG TEPs (Momi et al. ELife 2023)
      Jupyter Notebook
      •
      MIT License
      •4•14•1•0•Updated Apr 26, 2023Apr 26, 2023

    • gh-pages_hugo-academic_test

      Public
      TeX
      •
      MIT License
      •4•0•0•0•Updated Oct 26, 2022Oct 26, 2022

    • mne_eeg_workshop

      Public
      Jupyter Notebook
      •8•0•0•0•Updated Oct 19, 2022Oct 19, 2022

    • kernel-flow-tools

      Public
      Collaborative open-source Kernel Flow TD-fNIRS analysis development
      Jupyter Notebook
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      Other
      •12•9•32•4•Updated Oct 11, 2022Oct 11, 2022

    • CRANIA_UofTNeuroMod_EEG_Workshop_2022

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jul 27, 2022Jul 27, 2022

    • kcnischool2022-projectweek

      Public
      Jupyter Notebook
      •
      MIT License
      •12•1•10•0•Updated Jul 8, 2022Jul 8, 2022

    • muse-aob-tms

      Public
      Python
      •0•0•0•0•Updated Mar 23, 2022Mar 23, 2022

    • conwhat

      Public
      connectome-based white matter atlases for virtual lesion studies
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •3•1•2•0•Updated Oct 7, 2021Oct 7, 2021

    • ctwc-model

      Public
      Griffiths-Lefebvre Corticothalamic Wilson-Cowan Model - repo for Griffiths et al. 2019
      Jupyter Notebook
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      MIT License
      •1•3•0•0•Updated Jul 5, 2021Jul 5, 2021

    • braintrak

      Public
      Real-time brain states tracking system and corticothalamic neural field parameter estimation
      MATLAB
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      Other
      •6•0•0•0•Updated Apr 19, 2021Apr 19, 2021