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@PIFSCstockassessments PIFSCstockassessments

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    27 repositories

    • ss3diags

      Public
      R package with advanced diagnostics to evaluate a Stock Synthesis model. Diagnostics include residual analyses, hindcasting and cross-validation techniques, and retrospective analyses.
      r-packagestock-synthesis
      R
      •4•2•12•1•Updated Nov 16, 2024Nov 16, 2024

    • Opaka_simulation

      Public
      Simulation research project to evaluate impacts of survey allocation on assessment output
      R
      •
      Other
      •0•0•8•0•Updated Nov 7, 2024Nov 7, 2024

    • quarto-website-proto

      Public
      Source code for Quarto based PIFSC Stock Assessments website prototype
      TeX
      •0•0•0•0•Updated Nov 4, 2024Nov 4, 2024

    • ageproR

      Public
      Prototype R package interface for AGEPRO (Age Structure Projection Model) using the JSON data format.
      R
      •
      GNU General Public License v3.0
      •0•1•4•0•Updated Oct 24, 2024Oct 24, 2024

    • MHI_Bottomfish_Explorations

      Public
      Repository for the Main Hawaiian Islands Deep 7 Bottomfish Stock Assessment
      HTML
      •0•3•0•0•Updated Oct 23, 2024Oct 23, 2024

    • agepro-ref-manual

      Public
      Quatro Book Prototype of Jon Brodziak's AGEPRO Reference Manual
      TeX
      •0•0•0•0•Updated Sep 12, 2024Sep 12, 2024

    • 2024_Hawaii_Uku_Update

      Public
      Update to the 2020 benchmark assessment of uku in Hawaii, with data up to 2023.
      Scheme
      •
      Other
      •0•0•0•0•Updated Sep 7, 2024Sep 7, 2024

    • 2024-WCNPO-MLS-Rebuilding

      Public
      R
      •0•1•6•0•Updated Aug 29, 2024Aug 29, 2024

    • AGEPRO-GUI

      Public
      A redesign (as of AGEPRO v.4.3.0) of Alan Seaver's original NOAA Fisheries National Fisheries Toolbox interface
      C#
      •
      Other
      •1•2•1•0•Updated Aug 3, 2024Aug 3, 2024

    • AGEPRO-CoreLib

      Public
      AGEPRO CoreLib (Core Library) is an set of object-oriented data structures based on the AGEPRO version 4.0 Input File Structure format.
      C#
      •
      Other
      •0•0•0•0•Updated Aug 3, 2024Aug 3, 2024

    • WCNPOSWO-2023

      Public
      Scheme
      •0•0•3•0•Updated May 18, 2024May 18, 2024

    • MHI-Opakapaka-2024

      Public
      SS3 model for MHI opakapaka.
      Scheme
      •
      Other
      •0•1•6•0•Updated Mar 8, 2024Mar 8, 2024

    • Deep7-2024-WPSAR

      Public
      Main Hawaiian Islands Deep 7 2024 Stock Assessment
      R
      •
      Other
      •0•0•0•0•Updated Feb 8, 2024Feb 8, 2024

    • JABBA

      Public
      Just Another Bayesian Biomass Assessment
      HTML
      •14•1•1•0•Updated Dec 13, 2023Dec 13, 2023

    • AGEPRO

      Public
      Age Structured Projection Model
      C
      •
      Other
      •0•1•3•1•Updated Dec 13, 2023Dec 13, 2023

    • TMB.LBSPR

      Public
      Implementation of GTG LBSPR model using TMB
      R
      •
      Other
      •0•0•4•0•Updated Nov 30, 2023Nov 30, 2023

    • PIFSCstockassessments.github.io

      Public
      Source repo for PIFSCstockassessments GitHub Pages site:
      SCSS
      •
      Other
      •0•1•0•0•Updated Oct 20, 2023Oct 20, 2023

    • StepwiseLH

      Public
      Package to generate life history probability distributions from an estimate of maximum length.
      R
      •
      Other
      •0•0•0•0•Updated Oct 20, 2023Oct 20, 2023

    • NOAA-tech-memo-template

      Public
      TeX
      •
      Creative Commons Zero v1.0 Universal
      •0•1•0•0•Updated Sep 5, 2023Sep 5, 2023

    • ssgrid

      Public
      Utility functions for running Stock Synthesis (SS) models on the OpenScienceGrid HTCondor network
      R
      •
      Other
      •0•0•0•0•Updated Jul 18, 2023Jul 18, 2023

    • Uku_EFH

      Public
      CPUE and other analysis to support the uku essential fish habitat analyses
      R
      •0•0•0•0•Updated Jun 20, 2023Jun 20, 2023

    • r4ss

      Public
      files for r4ss package
      R
      •35•1•0•0•Updated May 12, 2023May 12, 2023

    • AmSam-Bottomfish-2023

      Public
      Stock assessment of BMUS for American Samoa, scheduled for 2023.
      Scheme
      •
      Other
      •0•1•0•0•Updated May 10, 2023May 10, 2023

    • expalg.cie

      Public
      R package developed to assist the Center of Independent Experts (CIE) review of the expansion algorithm.
      R
      •
      Other
      •0•0•1•0•Updated Jun 1, 2022Jun 1, 2022

    • hello-example

      Public
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Feb 14, 2022Feb 14, 2022

    • MHI-Uku-2020-Final

      Public
      R
      •
      Other
      •1•0•0•0•Updated Jun 30, 2020Jun 30, 2020

    • fishnurseries

      Public
      R
      •
      Other
      •0•0•0•0•Updated Sep 20, 2019Sep 20, 2019