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@compneurobilbao Computational Neuroimaging Lab

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    32 repositories

    • compneurobilbao.github.io

      Public
      CSS
      •
      MIT License
      •0•0•0•0•Updated Nov 17, 2024Nov 17, 2024

    • compneuro-fmriproc

      Public
      MRI preprocessing and analysis codes used by the Computational Neuroimaging Lab at Biocruces Bizkaia HRI
      Python
      •
      MIT License
      •0•0•1•0•Updated Nov 14, 2024Nov 14, 2024

    • compneuro-dwiproc

      Public
      MRI preprocessing and analysis codes used by the Computational Neuroimaging Lab at Biocruces Bizkaia HRI
      Shell
      •
      MIT License
      •0•0•0•0•Updated Oct 29, 2024Oct 29, 2024

    • siburmuin

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Oct 29, 2024Oct 29, 2024

    • ageml

      Public
      AgeML is a Python package for Age Modeling with Machine Learning made easy.
      machine-learningage-modelling
      Python
      •
      Apache License 2.0
      •1•5•15•1•Updated Oct 29, 2024Oct 29, 2024

    • hyperopt-sklearn

      Public
      Hyper-parameter optimization for sklearn, forked to make an unofficial release to PyPI to enable publishing ageml to PyPI.
      Python
      •
      Other
      •273•0•0•0•Updated Sep 24, 2024Sep 24, 2024

    • CTLesion2MNI152

      Public
      This repository applies the affine and deformation transformation on the CT scan in the subject space, and register it to the MNI 1mm space
      Python
      •
      MIT License
      •3•0•0•0•Updated Jul 17, 2024Jul 17, 2024

    • compneuro-anatproc

      Public
      Structural MRI T1 preprocessing and analysis pipeline
      Shell
      •
      MIT License
      •1•1•0•0•Updated May 21, 2024May 21, 2024

    • .github

      Public
      0•0•0•0•Updated Apr 16, 2024Apr 16, 2024

    • bha2

      Public
      Brain Hierarchical Atlas 2.0 project
      Jupyter Notebook
      •
      MIT License
      •0•2•0•0•Updated Mar 25, 2024Mar 25, 2024

    • WebLaTex

      Public template
      A complete alternative for Overleaf with VSCode + Web + Git Integration + Copilot + Grammar & Spell Checker + Live Collaboration Support. Based on GitHub Codespace and Dev container.
      TeX
      •
      MIT License
      •295•0•0•0•Updated Oct 1, 2023Oct 1, 2023

    • asd-subtyping-enrichment

      Public
      Jupyter Notebook
      •0•3•1•0•Updated Aug 10, 2023Aug 10, 2023

    • ni_devcontainer_template

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Apr 18, 2023Apr 18, 2023

    • stop-codon-pulido-17

      Public
      Stop Codon analyzer and Chain Replacement
      Python
      •
      GNU Affero General Public License v3.0
      •1•0•0•0•Updated Feb 19, 2020Feb 19, 2020

    • spectral-entropy-maider

      Public
      One-dimensional and two-dimensional spectral entropy (SE) in both signals EEG and PPG
      MATLAB
      •0•0•0•0•Updated Jan 5, 2020Jan 5, 2020

    • curso-datos-ehu-2018

      Public
      Jupyter Notebook
      •2•5•0•0•Updated Nov 12, 2019Nov 12, 2019

    • ppg-fmri-igabilon-17

      Public
      Lewy Body and Parkinson Disease Dementia fMRI-ppg Heart-Brain dynamics
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Jun 19, 2019Jun 19, 2019

    • ruber

      Public
      Analyzing Epilepsy patients from Ruber International
      Python
      •
      MIT License
      •0•1•1•0•Updated May 27, 2019May 27, 2019

    • diagrams

      Public
      draw.io diagrams for projects
      HTML
      •
      MIT License
      •0•0•0•0•Updated Sep 2, 2018Sep 2, 2018

    • aging

      Public
      Python
      •
      MIT License
      •0•1•0•0•Updated Jun 5, 2018Jun 5, 2018

    • mice-gozzi-18

      Public
      Mice functional and structural connectome analysis
      Python
      •0•0•0•0•Updated Feb 22, 2018Feb 22, 2018

    • surface-17

      Public
      Scripts and tools to run a FreeSurfer analysis in the cluster
      Python
      •0•0•0•0•Updated Jan 18, 2018Jan 18, 2018

    • nicon

      Public
      Easy use pipeline to get Functional and Structural Connectivity matrices from BIDS neuroimaging datasets
      Python
      •
      MIT License
      •1•1•1•0•Updated Dec 22, 2017Dec 22, 2017

    • fap2-jilopez-2016

      Public
      Survival scripts in R for FAP analysis
      R
      •
      MIT License
      •0•0•0•0•Updated Nov 22, 2017Nov 22, 2017

    • efficiency-ane-17

      Public
      Tractography efficiency
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 26, 2017Oct 26, 2017

    • dac-jilopez-17

      Public
      A divide-and-conquer strategy in tumor sampling enhances detection of intratumor heterogeneity in routine pathology: A modeling approach in clear cell renal cell carcinoma
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Oct 23, 2017Oct 23, 2017

    • multilayer-erik-17

      Public
      DMN Multilayer characterization
      Python
      •0•0•0•0•Updated Oct 3, 2017Oct 3, 2017

    • optogenetics-bonifazi-17

      Public
      Image detection and segmentation
      Python
      •0•0•0•0•Updated May 31, 2017May 31, 2017

    • neuroblastoma-pulido-17

      Public
      Neuroblastoma data analysis for Pulido et al
      0•0•0•0•Updated May 29, 2017May 29, 2017

    • helper-functions

      Public
      Helper functions for different projects in the lab
      Python
      •
      MIT License
      •0•0•0•0•Updated May 25, 2017May 25, 2017