Repositories list

• ete

  Public
  Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

  visualizationphylogeneticstree-structure+ 3phylogenomictreeviewpython

  Python

  •

  GNU General Public License v3.0

  •214•802•219•9•Updated Dec 25, 2024Dec 25, 2024

• ete-data

  Public
  Data files to use with the ETE Toolkit

  Python

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Jul 3, 2024Jul 3, 2024

• ete4_apps

  Public
  command line applications based on ete4

  HTML

  •0•0•0•0•Updated Dec 7, 2021Dec 7, 2021

• course

  Public
  Jupyter Notebook

  •9•12•0•0•Updated Sep 1, 2020Sep 1, 2020

• webplugin

  Public
  Experiments for a new webplugin module (examples for phylotastic.org project )

  Python

  •4•4•1•1•Updated May 19, 2020May 19, 2020

• pmodeltest

  Public
  Python implementation of modeltest/prottest supporting proteins and nucleotides (can be run in parallel).

  Python

  •5•5•2•0•Updated Feb 26, 2020Feb 26, 2020

• logicali

  Public
  Python

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated May 28, 2018May 28, 2018

• etetoolkit_GSoC

  Public
  0•0•0•0•Updated Jan 23, 2018Jan 23, 2018

• ete_toolchain

  Public
  0•0•1•0•Updated Nov 3, 2017Nov 3, 2017

• treematcher

  Public
  Search flexible patterns within tree structures using regular expression like syntax.

  Python

  •13•9•3•0•Updated Sep 22, 2017Sep 22, 2017

• GSoC

  Public
  OBF Google Summer of Code

  61•0•0•0•Updated Feb 9, 2017Feb 9, 2017

• ext_apps

  Public
  A compilation of external software used by ETE

  C

  •6•4•3•0•Updated May 13, 2016May 13, 2016

• cookbook

  Public
  HTML

  •9•18•0•0•Updated Feb 13, 2016Feb 13, 2016