Repositories list

• automatic-KG-creation-with-LLM

  Public
  Automatic Ontology and Knowledge Graph construction with LLM

  knowledge-graphreproducibilityontology-engineering+ 1large-language-models

  Python

  •

  Apache License 2.0

  •27•187•0•4•Updated Feb 2, 2025Feb 2, 2025

• ontology-docs-deployer

  Public
  Python

  •0•0•0•0•Updated Jan 31, 2025Jan 31, 2025

• GerPS-Process

  Public
  Documents (modeling and evaluation) related to the GerPS-onto (An ontology for German public service processes) together with the code for its automatic population with instances

  MIT License

  •1•2•0•0•Updated Jan 31, 2025Jan 31, 2025

• gerps-onto-landingpage

  Public
  Human-readable landingpage for our gerps ontologies.

  CSS

  •0•0•0•0•Updated Jan 21, 2025Jan 21, 2025

• fairjupyter

  Public
  FAIR Jupyter: a knowledge graph for semantic sharing and granular exploration of a computational notebook reproducibility dataset.

  pythonjupyter-notebookontology+ 4pubmed-centralknowledge-graphreproducibilityfair-data

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•1•0•0•Updated Jan 10, 2025Jan 10, 2025

• Reproduce-DLmethods-Biodiv

  Public
  This Repo contains the data and codes that were used to extract and analyse the reproducibility information of Deel Learning methods from publications in the Biodiversity domain.

  Python

  •

  Apache License 2.0

  •2•5•0•0•Updated Jan 6, 2025Jan 6, 2025

• abecto

  Public
  An ABox Evaluation and Comparison Tool for Ontologies.

  rdfevaluationowl+ 5comparisonknowledge-graphontologiesowl2abox

  Java

  •

  Apache License 2.0

  •0•4•3•0•Updated Dec 19, 2024Dec 19, 2024

• PlantHub-QueryBuilder

  Public
  0•0•0•0•Updated Dec 15, 2024Dec 15, 2024

• information-retrieval-using-multiple-LLM-and-RAG

  Public
  Information Retrieval using Multiple LLMs and RAG

  information-retrievalbiodiversityensemble-classifier+ 2large-language-modelsretrieval-augmented-generation

  TeX

  •

  Apache License 2.0

  •1•1•0•0•Updated Dec 11, 2024Dec 11, 2024

• MLProvCodeGen

  Public
  Provenance-based Custom Code Generation of Machine Learning Experiments in Jupyter Notebooks

  machine-learningprovenancejinja2-templates+ 1jupyterlab-extension

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •0•3•0•20•Updated Dec 10, 2024Dec 10, 2024

• DaiSi

  Public
  [Dai:Si] is a framework for dataset search with a middleware (NodeJS) and a frontend (Angular). Easy to adjust for your own search index.

  demonodefrontend+ 2dataset-searchangular

  TypeScript

  •

  GNU Lesser General Public License v3.0

  •3•1•0•36•Updated Dec 5, 2024Dec 5, 2024

• computational-reproducibility-pmc

  Public
  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•10•0•25•Updated Nov 22, 2024Nov 22, 2024

• abecto-space-travel-comparison

  Public
  This is a project to compare space travel data from Wikidata and DBpedia using ABECTO.

  Apache License 2.0

  •1•0•0•0•Updated Nov 13, 2024Nov 13, 2024

• abecto-unit-ontology-comparison

  Public
  A comparison and evaluation of unit ontologies using the ABECTO.

  evaluationunits-of-measurecomparison+ 5knowledge-graphontologiesunits-of-measurementaboxunit-ontologies

  Apache License 2.0

  •0•0•0•0•Updated Nov 5, 2024Nov 5, 2024

• iKNOW_poster

  Public
  A Knowledge Graph Management Platform for the Biodiversity Domain

  Ruby

  •

  MIT License

  •1•0•0•2•Updated Oct 28, 2024Oct 28, 2024

• XSearchKG

  Public
  Source code for XSearchKG, a full-stack web application for explainable keyword search over knowledge graphs

  knowledge-graphkeyword-searchexplainability

  JavaScript

  •

  MIT License

  •0•1•0•11•Updated Oct 26, 2024Oct 26, 2024

• abecto-vocabulary

  Public
  The ABECTO Vocabulary (AV) is a vocabulary for the description of execution plans and results of the ABox Evaluation and Comparison Tool for Ontologies (ABECTO).

  qualityrdfevaluation+ 4vocabularyowlontologyowl2

  Shell

  •0•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• semantic-search-usability-analysis

  Public
  Supplementary material for a usability evaluation of a semantic search for biological datasets

  evaluationjupyter-notebookuser-interface+ 6biodiversitysemantic-searchlife-sciencesuser-studyenvironmental-sciencedataset-search

  Jupyter Notebook

  •

  GNU Lesser General Public License v2.1

  •0•2•0•0•Updated Sep 18, 2024Sep 18, 2024

• GerPS-Datafield

  Public
  Repository for the GerPS-DatafieldOntology and its dataset for test purpose.

  MIT License

  •0•0•0•0•Updated Sep 12, 2024Sep 12, 2024

• KG2Tables

  Public
  The generator code for domain-specific tabular data from Wikidata

  Python

  •

  MIT License

  •2•2•0•3•Updated Aug 30, 2024Aug 30, 2024

• rdf-property-and-datatype-usage-scanner

  Public
  A tool to survey the usage of properties and datatypes in RDF dataset files (as the Web Data Commons) on the web.

  Java

  •

  MIT License

  •0•0•0•0•Updated Aug 27, 2024Aug 27, 2024

• semantic-assistants-2.0

  Public
  SA2.0 - An upgraded version of the Semantic Assistants Framework

  nlpapispring-boot+ 4rest-apinamed-entity-recognitionswagger-apitextmining

  Java

  •

  GNU Lesser General Public License v3.0

  •0•2•0•1•Updated Aug 27, 2024Aug 27, 2024

• abecto-ci-demo

  Public
  Shell

  •

  MIT License

  •0•0•0•0•Updated Aug 1, 2024Aug 1, 2024

• XAI_TCAV_ONTO

  Public
  Python

  •

  Apache License 2.0

  •0•1•0•4•Updated Jun 17, 2024Jun 17, 2024

• abecto-ci-demo-example

  Public
  0•0•0•0•Updated Jun 17, 2024Jun 17, 2024

• BiodivBERT

  Public
  BERT for Biodiversity domain including 2 downstream tasks: Named Entity Recognition (NER) and Relation Extraction (RE)

  Jupyter Notebook

  •

  Creative Commons Zero v1.0 Universal

  •1•7•0•0•Updated May 20, 2024May 20, 2024

• entity-retrieval-evaluation

  Public
  Experiments on entity based search

  search-engineentity-retrievalontologies+ 3semantic-searchentity-searchretrieval-algorithms

  Java

  •

  GNU Lesser General Public License v3.0

  •0•1•0•7•Updated Dec 5, 2023Dec 5, 2023

• wiki-category-consistency

  Public
  Source code for Evaluating the consistency between Wikipedia and Wikidata categories

  wikipediawikidatawikipedia-category

  JavaScript

  •

  MIT License

  •0•1•0•3•Updated Oct 17, 2023Oct 17, 2023

• KeySearchWiki

  Public
  Source code for generating KeySearchWiki - An Automatically Generated Dataset for Keyword Search over Wikidata

  wikipediawikidatadataset+ 2knowledge-graphkeyword-search

  JavaScript

  •

  MIT License

  •0•1•0•5•Updated Oct 6, 2023Oct 6, 2023

• ReproduceMeON

  Public
  ReproduceMe Ontology Network (ReproduceMeON)

  experimentontologyontologynetwork+ 2reproducememachine-learning

  1•2•0•0•Updated Jul 31, 2023Jul 31, 2023