High-Dimensional Neurology Group, UCL

All

20 repositories

geospm
Public
GeoSPM: Spatial analysis using statistical parametric mapping (SPM).
spatial-analysis
MATLAB
•
GNU General Public License v3.0
•1•3•0•0•Updated Apr 8, 2025Apr 8, 2025
stroop
Public
Codebase for the article 'Cognitive control & the anterior cingulate cortex: necessity & coherence'
Jupyter Notebook
•
Apache License 2.0
•1•0•0•0•Updated Nov 20, 2024Nov 20, 2024
vasari-auto
Public
A codebase for automated VASARI characterisation of glioma
Jupyter Notebook
•
Apache License 2.0
•1•0•0•0•Updated Sep 27, 2024Sep 27, 2024
minimal_computational_substrate
Public
Code for the article Minimal Computational Substrate of Fluid Intelligence
Jupyter Notebook
•0•0•0•0•Updated Aug 15, 2024Aug 15, 2024
compressed-transcriptomics
Public
Code and model weights for optimum compression of brain transcriptomic data
Jupyter Notebook
•
Apache License 2.0
•1•1•0•0•Updated Jul 19, 2024Jul 19, 2024
biobank-megamodeller
Public
This is a repository hosting all code and models detailed in the article Computational limits to the legibility of the human brain.
deep-learning high-dimensional-data mri feedforward-neural-network convolutional-neural-networks brain-imaging mri-brain
HTML
•
Apache License 2.0
•1•3•0•0•Updated Apr 2, 2024Apr 2, 2024
neurodash
Public
An interactive dashboard for operational analysis of radiological reports
Python
•0•0•0•0•Updated Nov 30, 2023Nov 30, 2023
neuradicon
Public
A natural language processing framework for neuroradiological reports
Python
•
Other
•0•0•0•0•Updated Nov 30, 2023Nov 30, 2023
neurollm
Public
Large language models for high-dimensional neurology
Python
•
Other
•0•1•0•0•Updated Nov 30, 2023Nov 30, 2023
neurocluster
Public
Embedding and clustering neuroradiological reports
Python
•
Other
•0•0•0•0•Updated Nov 30, 2023Nov 30, 2023
neuronlp-train
Public
The training repo for spacy models used by the neuronlp pipeline
Python
•
Other
•0•0•0•0•Updated Nov 29, 2023Nov 29, 2023
ontoview
Public
For interacting with medical ontologies in python
bioinformatics ontologies
Other
•0•0•0•0•Updated Nov 29, 2023Nov 29, 2023
brain-tumour-genetic-networks
Public
graph-theory bayesian brain stochastic-block-model tumours
Jupyter Notebook
•
Apache License 2.0
•1•3•0•0•Updated Oct 24, 2023Oct 24, 2023
tumour-seg
Public
This is a repository hosting all models detailed in the article Brain tumour segmentation with incomplete imaging data.
mri-brain mri-segmentation tumour-segmentation nnunet neuroradiology deep-learning mri
Python
•
Apache License 2.0
•2•3•0•0•Updated Oct 24, 2023Oct 24, 2023
3d_very_deep_vae
Public
PyTorch implementations of variational autoencoders for 3D images
pytorch neuroimaging variational-autoencoder
Python
•
GNU General Public License v3.0
•1•2•2•0•Updated Jul 1, 2022Jul 1, 2022
generative_imputation
Public
Python
•3•0•0•0•Updated May 19, 2022May 19, 2022
geospm_data_scripts
Public
Additional shell scripts and MATLAB code for running synthetic data experiments with GeoSPM.
Shell
•
GNU General Public License v3.0
•0•0•0•0•Updated Apr 22, 2022Apr 22, 2022
synthetic_volumes_toolbox
Public
An extension for SPM12 for generating volume data on demand.
MATLAB
•
GNU General Public License v3.0
•0•0•0•0•Updated Apr 5, 2022Apr 5, 2022
.github
Public
0•0•0•0•Updated Apr 5, 2022Apr 5, 2022
OoDMotion
Public
code for learning trajectory dependencies for human motion prediction
Python
•
MIT License
•45•0•0•0•Updated Mar 2, 2022Mar 2, 2022