Oslo Centre for Biostatistics and Epidemiology

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53 repositories

kids-chd
Public
Congenital Heart Disease among Children
R
•
GNU General Public License v3.0
•0•0•4•0•Updated Oct 29, 2024Oct 29, 2024
BayesSurvive
Public
Bayesian survival models for high-dimensional data
survival-analysis omics-data-integration graph-learning bayesian-variable-selection high-dimensional-statistics bayesian-cox-models
R
•
GNU General Public License v3.0
•1•1•3•0•Updated Oct 23, 2024Oct 23, 2024
napic
Public
R code for the NAPiC trial analyses
R
•
MIT License
•0•0•0•0•Updated Oct 17, 2024Oct 17, 2024
burst
Public
Code for the BURST trial
HTML
•
MIT License
•0•0•0•0•Updated Oct 17, 2024Oct 17, 2024
pyPhenoPop
Public
Phenotypic deconvolution in heterogeneous cancer cell populations using drug screen data
Python
•
MIT License
•1•2•0•0•Updated Oct 17, 2024Oct 17, 2024
nor-solidarity
Public
GitHub respository for the NOR-SOLIDARITY trial
clinical-trials ctu covid-19
HTML
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Creative Commons Attribution Share Alike 4.0 International
•0•0•0•0•Updated Oct 11, 2024Oct 11, 2024
pCRscore
Public
Python package to calculate pCR scores
Python
•
GNU General Public License v3.0
•0•0•1•0•Updated Oct 2, 2024Oct 2, 2024
Melanoma-Incidence-in-Norway
Public
R scripts used in the analysis of Melanoma incidence in Norway, 1983–2019
R
•0•0•0•0•Updated Oct 1, 2024Oct 1, 2024
bd4predict
Public
BD4QoLPredict is an API and Dashboard developed in the context of the BD4QoL European project for improving quality of life of head and neck cancer survivors.
machine-learning prediction-model
Python
•0•0•0•0•Updated Sep 30, 2024Sep 30, 2024
rBAPS
Public
R implementation of the BAPS software for Bayesian Analysis of Population Structure
r-package population-structure bayesian-analysis
R
•
GNU General Public License v3.0
•4•10•9•0•Updated Sep 27, 2024Sep 27, 2024
BAPS
Public
Bayesian Analysis of Population Structure
MATLAB
•0•0•4•0•Updated Sep 27, 2024Sep 27, 2024
TruncExpFam
Public
R package to generate data related to the Truncated Exponential Family
truncated-distribution r-package
R
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GNU General Public License v3.0
•1•0•2•0•Updated Sep 26, 2024Sep 26, 2024
permChacko
Public
Implementation of a modified Chacko (1966) algorithm for order restriction
R
•
GNU General Public License v3.0
•0•0•2•0•Updated Sep 18, 2024Sep 18, 2024
BayesMallows
Public
R-package for Bayesian preference learning with the Mallows rank model.
r-package mallows-model
R
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GNU General Public License v3.0
•9•21•8•0•Updated Sep 5, 2024Sep 5, 2024
MADMMplasso
Public
Multi variate multi response 'ADMM' with interaction effects
R
•
GNU General Public License v3.0
•0•1•2•0•Updated Sep 3, 2024Sep 3, 2024
org-metrics-dashboard
Public
An actions-powered dashboard to get an overview of your organization's open source repository health
TypeScript
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MIT License
•21•0•0•0•Updated Sep 2, 2024Sep 2, 2024
contingencytables
Public
Statistical Analysis of Contingency Tables
contingency-table r-package
R
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GNU General Public License v3.0
•2•3•1•0•Updated Aug 29, 2024Aug 29, 2024
survomics
Public
Tutorial on survival modeling with omics data
tutorial survival-analysis penalized-cox-models multi-omics mlr3 mlr3proba bayesian-cox-models survival-model-evaluation
TeX
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MIT License
•1•11•1•0•Updated Aug 22, 2024Aug 22, 2024
ctu-template
Public
R
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MIT License
•0•0•0•0•Updated Aug 19, 2024Aug 19, 2024
OCBEdev
Public
Development tools for R packages (complements `devtools`, `usethis`, etc.)
R
•
GNU General Public License v3.0
•0•0•0•0•Updated Aug 9, 2024Aug 9, 2024
BD4QoL
Public
Big Data for Quality of Life (BD4QoL) EU project repository.
machine-learning quality-of-life cancer-research clinical-prediction-models
Python
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MIT License
•0•0•0•0•Updated Jul 15, 2024Jul 15, 2024
psbcSpeedUp
Public
Penalized Semiparametric Bayesian Cox Models
survival-analysis omics-data bayesian-cox-models
C++
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GNU General Public License v3.0
•1•3•0•0•Updated Jul 3, 2024Jul 3, 2024
public-slides
Public
A repository for slides presented to the public or publicly-available slides
git slides presentations
Jupyter Notebook
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Creative Commons Attribution Share Alike 4.0 International
•0•1•0•0•Updated May 30, 2024May 30, 2024
EMJMCMC
Public
Bayesian model configuration, selection and averaging in complex regression contexts
R
•5•1•3•0•Updated May 6, 2024May 6, 2024
teaching_mf9130e
Public
Course material for MF9130E
R
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MIT License
•10•15•0•0•Updated Apr 24, 2024Apr 24, 2024
trajpy
Public
Trajpy - empowering feature engineering for trajectory analysis across domains.
time-series trajectory-analysis diffusion python-package repeated-measurements cell-migration
Python
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GNU General Public License v3.0
•2•6•11•0•Updated Mar 23, 2024Mar 23, 2024
EnrichIntersect
Public
R package for custom set enrichment analysis (CSEA) and interactive visualization of intersecting sets
R
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Other
•3•4•1•0•Updated Mar 21, 2024Mar 21, 2024
optimal_BC_treatment
Public
Modeling of mouse experiments suggests that optimal anti-hormonal treatment for breast cancer is diet-dependent
MATLAB
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MIT License
•0•0•0•0•Updated Mar 18, 2024Mar 18, 2024
course_med3007
Public
Course website for MED3007: Statistical Principles in Genomics
R
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MIT License
•0•1•0•0•Updated Jan 17, 2024Jan 17, 2024
workshop-stat-highdim
Public
Workshop website for Statistical Principles in Machine Learning for Small Biomedical Data
R
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MIT License
•1•1•0•0•Updated Dec 11, 2023Dec 11, 2023