Open Problems in Single-Cell Analysis

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30 packages

methods/scanvi_scarches
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

213
methods/batchelor_fastmnn
Published Sep 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

211
methods/seurat_transferdata
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

210
methods/combat
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

209
methods/knn
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

209
methods/naive_bayes
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

209
methods/logistic_regression
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

208
methods/scanvi
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

207
methods/singler
Published Sep 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

206
control_methods/embed_cell_types_jittered
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

205
control_methods/no_integration
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

204
methods/dca
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

203
methods/mlp
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

202
methods/alra
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

200
methods/scalex
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

200
control_methods/no_integration_batch
Published Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

198
methods/harmonypy
Published Sep 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

197
control_methods/true_labels
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

196
control_methods/positive_control
Published Jul 19, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference

195
methods/symsim
Published Jul 11, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

194
project/sync_resources
Published Aug 27, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/core

194
methods/scanvi
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

194
methods/knn_smoothing
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

193
methods/bbknn
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

193
control_methods/embed_cell_types
Published Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

192
methods/magic
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

190
methods/uce
Published Jan 6, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

190
methods/scdesign2
Published Jul 10, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

189
methods/zinbwave
Published Jul 11, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

189
methods/srtsim
Published Jul 10, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

188