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    72 repositories

    • platform-api

      Public
      GraphQL and Rest API rewrite of the current Open Targets platform API
      Scala
      •
      Apache License 2.0
      •5•9•1•2•Updated Oct 15, 2024Oct 15, 2024

    • gentropy

      Public
      Open Targets python framework for post-GWAS analysis
      pythonopen-sourcegwasgeneticspysparkdrug-discovery
      Jupyter Notebook
      •
      Apache License 2.0
      •8•34•0•8•Updated Oct 15, 2024Oct 15, 2024

    • evidence_datasource_parsers

      Public
      script to convert phewascatalog database to JSONs, with ENSGIDs and EFO ids.
      Python
      •
      Apache License 2.0
      •2•7•0•3•Updated Oct 15, 2024Oct 15, 2024

    • ot-ui-apps

      Public
      Open Targets Platform web applications
      javascriptgraphqlreactjswebappembl-ebivitejsturborepoeuropean-bioinformatics-institute
      JavaScript
      •
      Apache License 2.0
      •11•5•0•11•Updated Oct 15, 2024Oct 15, 2024

    • parquet2json

      Public
      Parquet to JSON lines converter
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 15, 2024Oct 15, 2024

    • orchestration

      Public
      Open Targets pipeline orchestration layer
      Python
      •
      Apache License 2.0
      •0•1•1•5•Updated Oct 15, 2024Oct 15, 2024

    • k8s-gcp-platform

      Public
      This repository defines an Open Targets Platform deployment on top of a Kubernetes cluster
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 15, 2024Oct 15, 2024

    • gentroutils

      Public
      Utility CLI tools for gentropy orchestration
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 15, 2024Oct 15, 2024

    • json_schema

      Public
      Open Targets target-disease association schema
      Python
      •
      Apache License 2.0
      •10•9•0•0•Updated Oct 15, 2024Oct 15, 2024

    • ontoform

      Public
      Transform ontologies into NDJSONs optimized for Open Targets pipeline
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 14, 2024Oct 14, 2024

    • platform-output-support

      Public
      POS is an automatic and unified place to perform a release of OT Platform to the public
      Shell
      •
      Apache License 2.0
      •3•0•0•1•Updated Oct 7, 2024Oct 7, 2024

    • station-pos

      Public
      This is a channel for POS to announce events
      Apache License 2.0
      •0•0•0•0•Updated Oct 7, 2024Oct 7, 2024

    • platform-etl-backend

      Public
      Scala
      •
      Apache License 2.0
      •8•8•0•5•Updated Oct 3, 2024Oct 3, 2024

    • standalone-deployment-platform

      Public
      Standalone local deployment for Open Targets Platform
      Shell
      •
      Apache License 2.0
      •1•4•0•0•Updated Oct 3, 2024Oct 3, 2024

    • gentropy-input-support

      Public
      Non-Spark preprocessing for datasource ingestion
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 1, 2024Oct 1, 2024

    • curation

      Public
      mappings used by the open targets platform to integrate data sources
      Python
      •
      Apache License 2.0
      •1•4•0•1•Updated Sep 30, 2024Sep 30, 2024

    • terraform-google-opentargets-platform

      Public
      Terraform module for Open Targets Platform infrastructure definition
      HCL
      •
      Apache License 2.0
      •2•1•0•0•Updated Sep 27, 2024Sep 27, 2024

    • platform-docs

      Public
      https://platform-docs.opentargets.org/
      Other
      •1•0•0•2•Updated Sep 26, 2024Sep 26, 2024

    • platform-input-support

      Public
      Open Targets Platform input support project.
      Python
      •
      Apache License 2.0
      •5•5•0•5•Updated Sep 24, 2024Sep 24, 2024

    • baseline-expression

      Public
      Code and documentation for baseline expression and specificity data.
      Jupyter Notebook
      •
      Apache License 2.0
      •0•1•0•0•Updated Sep 20, 2024Sep 20, 2024

    • OnToma

      Public
      Map your disease and phenotype terms to the Open Targets platform ontology
      Python
      •
      Apache License 2.0
      •6•20•0•0•Updated Sep 20, 2024Sep 20, 2024

    • ot-release-metrics

      Public
      Collection and visualisation of Open Targets Platform release metrics.
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Sep 20, 2024Sep 20, 2024

    • google-batch-monitor

      Public
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 20, 2024Sep 20, 2024

    • issues

      Public
      Issue tracker for Open Targets Platform and Open Targets Genetics Portal
      tracker
      Apache License 2.0
      •2•12•226•0•Updated Sep 13, 2024Sep 13, 2024

    • opentargets.github.io

      Public
      Open Targets corporate website code using Jekyll
      jekyll
      HTML
      •
      Apache License 2.0
      •3•8•0•2•Updated Sep 12, 2024Sep 12, 2024

    • ot-vis-playground

      Public
      JavaScript
      •
      Apache License 2.0
      •0•0•3•0•Updated Sep 9, 2024Sep 9, 2024

    • ot-ai-api

      Public
      JavaScript
      •
      Apache License 2.0
      •1•0•0•0•Updated Sep 6, 2024Sep 6, 2024

    • stopReasons

      Public
      Analysis on stop reasons
      Python
      •
      Apache License 2.0
      •2•8•0•0•Updated Jun 17, 2024Jun 17, 2024

    • experimental_programme

      Public
      Python
      •0•0•0•0•Updated Jun 11, 2024Jun 11, 2024

    • opensearch-nanny

      Public
      Opensearch health-checking sidecar
      Go
      •0•0•0•0•Updated May 10, 2024May 10, 2024